cluster # 6615

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Oryza sativa
cluster # 6615 cluster # 6615 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6615#0 length = 1388 sequences # 4
consensusID : consensus_6615#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1388
fasta sequence
                              [CACACACACACACACTCTCTACTCTCTCTAAGCTAAGCTAATGACAGCAGCAATGGC-GCCGCCGCAGCTCGTGTCCGTGCTGGTGGC-GCTCCTCTGC-GTGGC-GGC-GGC-GTC-GCC-GGC-GGGGGTGGGGGC-GGCGC-GGTTC-GT-GTGCAACGCGACGGCGCCGCGGGCGTCCACGTGCCAGGCGCTGGTGGCGTACGCGCCGCCCAACGCCACCACGCTCGCCGCGGTGCGGGC-GCTCTTCCAGCTCCGCTCCCACCGCGCGCTGCTGGCGTCCAACGGCCTGCCGCTCTCCACGCCGCCCTCCGCGCCGGCGCCCTCGCCGCTCCGCGTCCGCCTCCCCTGCCTCTGCTCCGGTGGCGCCGGCGCCACCTTCCAGCGCCCCACCTACCGCATCCGCGCCGGCGACACCCTCGACGCCATCGCCAGGGGTGTCTTCGCCGGCCTCGTCACCTACCAGGACATCGCCGCCGCCAACAACGTCTCCGACCCCAACAAGATCGCCGTCGGCCAGGAGCTCTGGATCCCCGTGCCCTGCAGCTGCGACCCCGTCGCCGGCCAGCCCGTCGTCCACTACACCTACGTCGTGCCGCCGGGGGCCTCCGTGGCCGCCATTGCTCAGGACTTCGCCACCACGGAGGCCACCGTCCTCGCCTTGAACCGGATGCCCGACGCCAAGAGCCTCCTCGCCGGCCAGGTTCTTGATGTGCCGCTCCGAGCCTGCTCCTCTGCCATTAGCAGTACAGCTATAGACCGCAACCTCCTTGTTCCCAATGGAAGTTACATTCTGACTGCCAACAACTGCATCATGTGTGGCTGCAGCTCCTACACTTGGCAGCTGGATTGTCAACCAACACAAGGAATAAGCTCATCGTTCTGCCCAGCTTCAAAATGTGGAGATATGTTCCTCGGGAACACGACCACATCGCCGACATCATCTTGCGAAAGCACGGCGTGCTCGTATGCAGGGTACACCAATAGCACATCTTTCACCATCCTTGCCAATCTTACCACCAGTTCTACATGCAATGCTGCTGCGATGTCTCCAATGGCGCAGCAGGCTCACTCATCGGCGTTCAGGCTGGCATCAACGTGGTTGAGATGGACTGAGCTGATCGTTCGTCTTCATGTCATTTTCTTGTGTGTAAGCTTCCTCAATCATGTTTGAGGAGCATTTCCATTCTTGTTTTCTCAGTGCCTGGACTACTGATTTCGTGGTCTCATGTTGTGAGTAATCTGGGCAGTGTAAGTGTGGACTTAATAAGTAGCTGATTGGACGTGTAAGTGTGGATGGACACCAGGGGAACACATGTTTTTGTGTTAGAATGTAGATCAGGAGACATTTGTACTGTCGAACTCTTGCAAAGGTAGTTCTATGATTTTGCTTTTAAAAA]

[+] EMBL AK060664             [CACACACACACACACTCTCTACTCTCTCTAAGCTAAGCTAATGACAGCAGCAATGGC GCCGCCGCAGCTCGTGTCCGTGCTGGTGGC GCTCCTCTGC GTGGC GGC GGC GTC GCC GGC GGGGGTGGGGGC GGCGC GGTTC GT GTGCAACGCGACGGCGCCGCGGGCGTCCACGTGCCAGGCGCTGGTGGCGTACGCGCCGCCCAACGCCACCACGCTCGCCGCGGTGCGGGC GCTCTTCCAGCTCCGCTCCCACCGCGCGCTGCTGGCGTCCAACGGCCTGCCGCTCTCCACGCCGCCCTCCGCGCCGGCGCCCTCGCCGCTCCGCGTCCGCCTCCCCTGCCTCTGCTCCGGTGGCGCCGGCGCCACCTTCCAGCGCCCCACCTACCGCATCCGCGCCGGCGACACCCTCGACGCCATCGCCAGGGGTGTCTTCGCCGGCCTCGTCACCTACCAGGACATCGCCGCCGCCAACAACGTCTCCGACCCCAACAAGATCGCCGTCGGCCAGGAGCTCTGGATCCCCGTGCCCTGCAGCTGCGACCCCGTCGCCGGCCAGCCCGTCGTCCACTACACCTACGTCGTGCCGCCGGGGGCCTCCGTGGCCGCCATTGCTCAGGACTTCGCCACCACGGAGGCCACCGTCCTCGCCTTGAACCGGATGCCCGACGCCAAGAGCCTCCTCGCCGGCCAGGTTCTTGATGTGCCGCTCCGAGCCTGCTCCTCTGCCATTAGCAGTACAGCTATAGACCGCAACCTCCTTGTTCCCAATGGAAGTTACATTCTGACTGCCAACAACTGCATCATGTGTGGCTGCAGCTCCTACACTTGGCAGCTGGATTGTCAACCAACACAAGGAATAAGCTCATCGTTCTGCCCAGCTTCAAAATGTGGAGATATGTTCCTCGGGAACACGACCACATCGCCGACATCATCTTGCGAAAGCACGGCGTGCTCGTATGCAGGGTACACCAATAGCACATCTTTCACCATCCTTGCCAATCTTACCACCAGTTCTACATGCAATGCTGCTGCGATGTCTCCAATGGCGCAGCAGGCTCACTCATCGGCGTTCAGGCTGGCATCAACGTGGTTGAGATGGACTGAGCTGATCGTTCGTCTTCATGTCATTTTCTTGTGTGTAAGCTTCCTCAATCATGTTTGAGGAGCATTTCCATTCTTGTTTTCTCAGTGCCTGGACTACTGATTTCGTGGTCTCATGTTGTGAGTAATCTGGGCAGTGTAAGTGTGGACTTAATAAGTAGCTGATTGGACGTGTAAGTGTGGATGGACACCAGGGGAACACATGTTTTTGTGTTAGAATGTAGATCAGGAGACATTTGTACTGTCGAACTCTTGCAAAGGTAGTTCTATGA               ]
[+] EMBL AU183334             [                              AGCTAAGCTAATGACAGCAGCAATGGCAGCCGCCGCAGCTAGNGTCCGNGCTGGNGGCAGCTCCTCTGCAGTGGCAGGCAGGCAGTCAGCCAGGCAGGNGGTGGGGGCAGGCGCAGGTTCAGTAGTGCAACGCGACGGCGCCGCGGGCGTCCACGTGCCAGGCGCTGGTGGAGTACGCGCCGCCCAACGCCACCACGCTCGCCGAGGTGCGGGCAGCTCTTCCAGCTCCGCTCCCACCGCGCGCTGCTGGCGTCCAACGGCCTGCCGCTCTCCACGCCGCCCTCCGCGCCGGCGCCCTCGCCGCTCCGAGTCCGCCTCCCCTGCCTCTGCTCCGGTGGCGCCGGCGCCACCTTCCAGCGCCCCACCTACCGCATCCGCGCCGGCGACACCCTCGACGCCATCGCAAGGGGTGTCTTCGCCGGCCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU173421             [                                                                                                                                                                                                                                                                                                                                                                      GCTCCGGTGGCGCCGGCGCCACCTTCCAGCGCCCCACCTACCGCATCCGCGCCGGCGACACCCTCGACGCCATCGCCAGGGGTGTCTTCGCCGGCCTCGTCACCTACCAGGACATCGCCGCCGCCAACAACGTCTCCGACCCCAACAAGATCGCCGTCGGCCAGGAGCTCTGGATCCCCGTGCCCTGCAGCTGCGACCCCGTCGCCGGCCAGCCCGTCGTCCACTACACCTACGTCGTGCGCCCGGGGGCCTCCGTGGCCGCCATTGCTCAGGACTTCGCCACCACGGAGGCCACCGTCCTCGCCTTGAACCGGATGCCCGACGCCAAGAGCCTTCTCGCCGGCCAGGTTCTTGATGTGCCGNTCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU173422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGCAGGGTACACCAATAGCACATCTTTCACCATCCTTGCCAATCTTACCACCAGTTNTACATGCAATGCTGCTGCGATGTCTCCAATGGCGCAGCAGGCTCACTCATCGGCGTTCAGGCTGGCATCAACGTGGTTGAGATGGACTGAGCTGATCGTTTGTCTTCATGTCATTTTCTTGTGTGTAAGCTTCCTCAATCATGTTTGAGGAGCATTTCCATTCTTGTTTTCTCAGTGCCTGGACTACTGATTTCGTGGTCTCATGTTGTGAGTAATCTGGGCAGTGTAAGTGTGGACTTAATAAGTAGCTGATTGGACGTGTAAGTGTGGATGGACACCAGGGGAACACATGTTTTTGTGTTAGAATGTAGATCAGGAGACATTTGTACTGTCGAACTCTTGCAAAGGTAGTTCTATGATTTTGCTTTTAAAAA]




>consensus_6615#0
CACACACACACACACTCTCTACTCTCTCTAAGCTAAGCTAATGACAGCAGCAATGGCGCC
GCCGCAGCTCGTGTCCGTGCTGGTGGCGCTCCTCTGCGTGGCGGCGGCGTCGCCGGCGGG
GGTGGGGGCGGCGCGGTTCGTGTGCAACGCGACGGCGCCGCGGGCGTCCACGTGCCAGGC
GCTGGTGGCGTACGCGCCGCCCAACGCCACCACGCTCGCCGCGGTGCGGGCGCTCTTCCA
GCTCCGCTCCCACCGCGCGCTGCTGGCGTCCAACGGCCTGCCGCTCTCCACGCCGCCCTC
CGCGCCGGCGCCCTCGCCGCTCCGCGTCCGCCTCCCCTGCCTCTGCTCCGGTGGCGCCGG
CGCCACCTTCCAGCGCCCCACCTACCGCATCCGCGCCGGCGACACCCTCGACGCCATCGC
CAGGGGTGTCTTCGCCGGCCTCGTCACCTACCAGGACATCGCCGCCGCCAACAACGTCTC
CGACCCCAACAAGATCGCCGTCGGCCAGGAGCTCTGGATCCCCGTGCCCTGCAGCTGCGA
CCCCGTCGCCGGCCAGCCCGTCGTCCACTACACCTACGTCGTGCCGCCGGGGGCCTCCGT
GGCCGCCATTGCTCAGGACTTCGCCACCACGGAGGCCACCGTCCTCGCCTTGAACCGGAT
GCCCGACGCCAAGAGCCTCCTCGCCGGCCAGGTTCTTGATGTGCCGCTCCGAGCCTGCTC
CTCTGCCATTAGCAGTACAGCTATAGACCGCAACCTCCTTGTTCCCAATGGAAGTTACAT
TCTGACTGCCAACAACTGCATCATGTGTGGCTGCAGCTCCTACACTTGGCAGCTGGATTG
TCAACCAACACAAGGAATAAGCTCATCGTTCTGCCCAGCTTCAAAATGTGGAGATATGTT
CCTCGGGAACACGACCACATCGCCGACATCATCTTGCGAAAGCACGGCGTGCTCGTATGC
AGGGTACACCAATAGCACATCTTTCACCATCCTTGCCAATCTTACCACCAGTTCTACATG
CAATGCTGCTGCGATGTCTCCAATGGCGCAGCAGGCTCACTCATCGGCGTTCAGGCTGGC
ATCAACGTGGTTGAGATGGACTGAGCTGATCGTTCGTCTTCATGTCATTTTCTTGTGTGT
AAGCTTCCTCAATCATGTTTGAGGAGCATTTCCATTCTTGTTTTCTCAGTGCCTGGACTA
CTGATTTCGTGGTCTCATGTTGTGAGTAATCTGGGCAGTGTAAGTGTGGACTTAATAAGT
AGCTGATTGGACGTGTAAGTGTGGATGGACACCAGGGGAACACATGTTTTTGTGTTAGAA
TGTAGATCAGGAGACATTTGTACTGTCGAACTCTTGCAAAGGTAGTTCTATGATTTTGCT
TTTAAAAA
clustalw multiple alignements is not computed in this case