Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6631 cluster # 6631       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6631#0 length = 2365 sequences # 3  
consensus_6631#1 length = 664 sequences # 1  

consensusID : consensus_6631#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2365
fasta sequence
                              [CCAGTAACGCCCAGGAGCTTCGAGAGAATTCCACACCATTCCCCCCTACCACCACGCGGCGCATCATCACAATACACAGCCTCTGCTTCCCCCGGCAACCCAACCGATTCGCGCTCACGCCACCTGCAATCCGCGACCAGACGCGCGGGCCGTTGAGATCAACAAACACATCGCACGCGACGCCGCGTGAGCCCGTACGATCGCCCCCTCCCGCGCCGCGCCTCCGCACTCTGGTTGGTTGCCTCGCCGGCGATGTCGACGCAGTCCATCTCGCCCGCCGCGGCGGCCGCGTCCGCGCAGTACTCGTACCCGGCTGCCGCGGCGGCGGCGGTCCCGTCCTACTTCCCCGTCCCGTTCCACCTCCAGAACGTGCAGCAGCCCGCCACCTGGCCAGCGGCGCCCGCGGCGTACAACGCCGTCTACCCCATGCCCCAAGTCCAGCAGGTTCAGCAACTGTTCCAGAAAGATTCACAGATAATCACTCCTGAAGCTCTAGCTACTGTGAAAGCTGCTATTGCAAATAGTGAGAAAGACAAGAAGATTGAAGCAAACAAAAAGGCAGTACCTCGAAAGGCAGCTGGGCAATCTTGGGAGGATCCAACTTTGGCTGACTGGCCCGAAATGTGACTTTCCCCTCGTCTGAACTTGTCTGAATGTCTGTTATCCTCACGTCAACAGACCATCAAACACCTTCAATTCCCCAGGCAAGATCTAATGTTCGATCTATGTATTCTAATAAGACAAACTTTCCCCTGTTTCCTTCTGTTAAAGGTGGCCGAGGATGTGATATGTAGCCCAACAGGTTTCAGAGTTGATGCCTGTCTCGTGGAATTAGGTGGGCTTTGCAGATGATATAGTAAACATTTCCTGTGCCTTTGCCATTAGTTTACATGCGTTGTCATCTCGTTTTTGCATGCCTAATTTGATTATATGAATATGATATTTGAAAATTTTTCATAGAGTTATACAGAGAAATATGTTCTACTGCGCATTTTGGTGCAAACTATTCCACTTATATTTTTTATTCTAATGTTCCTGGTGTAATTTTGATGATACACTTACCATCCTAGGATTAATATGGTGATAGATTCTTGTTGGGGACTGTCCAAATAAAGATCTTCCCTTATATATATTGTTATCAACAAAGCATGAACATTATTAAAAAGTTTTGTTCCATATATTAGTGATTGCATAAAGGATGAGGCTTTTAGCCAATCAACTTACTTTCCACAATAATCTGATTTTATCAATTCGTCATGTTGCGTTCCTGTTAGTCAATATAACATGTACTGTAGCTCAGCTCTTGCAGATTGTTTGTCATCCTTATTTTTAGATTTTTGTACAATTAAATATATTAACTGTATTTAGCATTTTTGGCTACAGTTTT-CTA-GTTTTACATGCTTAGCTGACGTATCAGATACCACTATTTAGTTGTAATACTTCATGATGTGTCATCCATCATGTAACATGTCTAAGATGTAGCAGCCTTGCTGAGTTGATGTATAATAATTTAGCAGCAGCATGCAATGTTGGCAGCGTTAAATACTTATGATGCTATATTGTCTTTGGAATTTACTAGCACCTGACATGAGTATGTATTTGTGCTGTCATGTTTCGTCATAATTTGATAGAAGCAAATATATTATTCTACTTTAGTCTGTAGCAATGACCAAAAATGGTGCTATAACAGTTGTTTTTCTCAAATGTGCCCTCTTTTTATTTCAAAGCATTCACACTTACATCTGACAAATTTTCCCCATCCACAGATGATTTTCGGTTGTTTTGTGGCGATCTTGGAAACGAAGTGAACGATGTTGTTCTTACAAAGGCATTTTCAAAATATCCATCCTTCAACATGGCTAGGGTTATTAGGGACAAATGGACTGGTAAAACTAGGGGCTATGCCTTTGTTAGTTTTGCTAATGCGTCGGATCTTGCTGCAGCATTGAAAGAGATGAATGGTAAATATGTTGGAAACAGGCCAATCAAACTACGCAAGAGCACATGGAAGAACAGAATCGACTACGAGGCATTACAGAAGCCGAAGACTCAACCACAGAAGAAGTTCAAAGCGCAGAAAAAAAGCATTCTACACAAGTGAAGTAAATTCACTCTCTAGAGAGTGATCCCTAGTGTCATGTTGCACATGAGTCCTTTGTTGCTCCTGCAATAAACGACGTTAAAGCCTTCAGCGCCCGGCGGTGCGCTTGTCACGTTTGGCCTAGTGATTGTTCTAGGGTAGTATGGCTCGTCCCAATTTGTAATGGAAATTTAGGTGTAAATATTCTAATGACTGGTACCGTTGTGAACGGTACGAAGTTCTCTTATGATGAACTCCTGTAGCGTGGAGCAATTCGATTATAAA]

[+] EMBL AK067651             [CCAGTAACGCCCAGGAGCTTCGAGAGAATTCCACACCATTCCCCCCTACCACCACGCGGCGCATCATCACAATACACAGCCTCTGCTTCCCCCGGCAACCCAACCGATTCGCGCTCACGCCACCTGCAATCCGCGACCAGACGCGCGGGCCGTTGAGATCAACAAACACATCGCACGCGACGCCGCGTGAGCCCGTACGATCGCCCCCTCCCGCGCCGCGCCTCCGCACTCTGGTTGGTTGCCTCGCCGGCGATGTCGACGCAGTCCATCTCGCCCGCCGCGGCGGCCGCGTCCGCGCAGTACTCGTACCCGGCTGCCGCGGCGGCGGCGGTCCCGTCCTACTTCCCCGTCCCGTTCCACCTCCAGAACGTGCAGCAGCCCGCCACCTGGCCAGCGGCGCCCGCGGCGTACAACGCCGTCTACCCCATGCCCCAAGTCCAGCAGGTTCAGCAACTGTTCCAGAAAGATTCACAGATAATCACTCCTGAAGCTCTAGCTACTGTGAAAGCTGCTATTGCAAATAGTGAGAAAGACAAGAAGATTGAAGCAAACAAAAAGGCAGTACCTCGAAAGGCAGCTGGGCAATCTTGGGAGGATCCAACTTTGGCTGACTGGCCCGAAATGTGACTTTCCCCTCGTCTGAACTTGTCTGAATGTCTGTTATCCTCACGTCAACAGACCATCAAACACCTTCAATTCCCCAGGCAAGATCTAATGTTCGATCTATGTATTCTAATAAGACAAACTTTCCCCTGTTTCCTTCTGTTAAAGGTGGCCGAGGATGTGATATGTAGCCCAACAGGTTTCAGAGTTGATGCCTGTCTCGTGGAATTAGGTGGGCTTTGCAGATGATATAGTAAACATTTCCTGTGCCTTTGCCATTAGTTTACATGCGTTGTCATCTCGTTTTTGCATGCCTAATTTGATTATATGAATATGATATTTGAAAATTTTTCATAGAGTTATACAGAGAAATATGTTCTACTGCGCATTTTGGTGCAAACTATTCCACTTATATTTTTTATTCTAATGTTCCTGGTGTAATTTTGATGATACACTTACCATCCTAGGATTAATATGGTGATAGATTCTTGTTGGGGACTGTCCAAATAAAGATCTTCCCTTATATATATTGTTATCAACAAAGCATGAACATTATTAAAAAGTTTTGTTCCATATATTAGTGATTGCATAAAGGATGAGGCTTTTAGCCAATCAACTTACTTTCCACAATAATCTGATTTTATCAATTCGTCATGTTGCGTTCCTGTTAGTCAATATAACATGTACTGTAGCTCAGCTCTTGCAGATTGTTTGTCATCCTTATTTTTAGATTTTTGTACAATTAAATATATTAACTGTATTTAGCATTTTTGGCTACAGTTTT CTA GTTTTACATGCTTAGCTGACGTATCAGATACCACTATTTAGTTGTAATACTTCATGATGTGTCATCCATCATGTAACATGTCTAAGATGTAGCAGCCTTGCTGAGTTGATGTATAATAATTTAGCAGCAGCATGCAATGTTGGCAGCGTTAAATACTTATGATGCTATATTGTCTTTGGAATTTACTAGCACCTGACATGAGTATGTATTTGTGCTGTCATGTTTCGTCATAATTTGATAGAAGCAAATATATTATTCTACTTTAGTCTGTAGCAATGACCAAAAATGGTGCTATAACAGTTGTTTTTCTCAAATGTGCCCTCTTTTTATTTCAAAGCATTCACACTTACATCTGACAAATTTTCCCCATCCACAGATGATTTTCGGTTGTTTTGTGGCGATCTTGGAAACGAAGTGAACGATGTTGTTCTTACAAAGGCATTTTCAAAATATCCATCCTTCAACATGGCTAGGGTTATTAGGGACAAATGGACTGGTAAAACTAGGGGCTATGCCTTTGTTAGTTTTGCTAATGCGTCGGATCTTGCTGCAGCATTGAAAGAGATGAATGGTAAATATGTTGGAAACAGGCCAATCAAACTACGCAAGAGCACATGGAAGAACAGAATCGACTACGAGGCATTACAGAAGCCGAAGACTCAACCACAGAAGAAGTTCAAAGCGCAGAAAAAAAGCATTCTACACAAGTGAAGTAAATTCACTCTCTAGAGAGTGATCCCTAGTGTCATGTTGCACATGAGTCCTTTGTTGCTCCTGCAATAAACGACGTTAAAGCCTTCAGCGCCCGGCGGTGCGCTTGTCACGTTTGGCCTAGTGATTGTTCTAGGGTAGTATGGCTCGTCCCAATTTGTAATGGAAATTTAGGTGTAAATATTCTAATGACTGGTACCGTTGTGAACGGTACGAAGTTCTCTTATGATGAACTCCTGTAGCGTGGAGCAATTCGATTATAAA]
[+] EMBL CF304284             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ggGTGACTTTCCCCTCGTCTGAACTTGTCTGAATGTCTGTTATCCTCACGTCAACAAACCATCAAACACCTTCAATTCCCCAGGCAAGATCTAATGTTCGATCTATGTATTCTAATAAGACAAACTTTCCCCTGTTTCCTTCTGTTAAAGGTGGCCGAGGATGTGATATGTAGCCCAACAGGTTTCAGAGTTGATGCCTGTCTCGTGGAATTAGGTGGGCTTTGCAGATGATATAGTAAACATTTCCTGTGCCTTTGCCATTAGTTTACATGCATTGTCATCTCGTTTTTGCATGCCTAATTTGATTATATGAATATGATATTTGAAAATTTTTCATAGAGTTATACAGAGAAATATGTTCTACTGCGCATTTTGGTGCAAACTATTCCACTTATATTTTTTATTCTAATGTTCCTGGTGTAATTTTGATGATACACTTACCATCCTAGGATTAATATGGTGATAGATTCTTGTTGGGGACTGTCCAAATAAAGATCTTCCCTTATATATATTGTTATCAACAAAGCATGAACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AA750029             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATCTGATTTTATCAGTTCGTCATGTTGCGTTCCTGTTAGTCAATATAACATGTACTGTAGCTCAGCTCTTGCAGATTGTTTGTCATCCTTATTTTTAGATTTTTGTACAATTAAATATATTAACTGTATTTAGCATTTTTAGCTACAGTTTTGCTACGTTTTACATGCTTAGCTGACGTATCAGATACCACTATTTAGTTG CATACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_6631#0 CCAGTAACGCCCAGGAGCTTCGAGAGAATTCCACACCATTCCCCCCTACCACCACGCGGC GCATCATCACAATACACAGCCTCTGCTTCCCCCGGCAACCCAACCGATTCGCGCTCACGC CACCTGCAATCCGCGACCAGACGCGCGGGCCGTTGAGATCAACAAACACATCGCACGCGA CGCCGCGTGAGCCCGTACGATCGCCCCCTCCCGCGCCGCGCCTCCGCACTCTGGTTGGTT GCCTCGCCGGCGATGTCGACGCAGTCCATCTCGCCCGCCGCGGCGGCCGCGTCCGCGCAG TACTCGTACCCGGCTGCCGCGGCGGCGGCGGTCCCGTCCTACTTCCCCGTCCCGTTCCAC CTCCAGAACGTGCAGCAGCCCGCCACCTGGCCAGCGGCGCCCGCGGCGTACAACGCCGTC TACCCCATGCCCCAAGTCCAGCAGGTTCAGCAACTGTTCCAGAAAGATTCACAGATAATC ACTCCTGAAGCTCTAGCTACTGTGAAAGCTGCTATTGCAAATAGTGAGAAAGACAAGAAG ATTGAAGCAAACAAAAAGGCAGTACCTCGAAAGGCAGCTGGGCAATCTTGGGAGGATCCA ACTTTGGCTGACTGGCCCGAAATGTGACTTTCCCCTCGTCTGAACTTGTCTGAATGTCTG TTATCCTCACGTCAACAGACCATCAAACACCTTCAATTCCCCAGGCAAGATCTAATGTTC GATCTATGTATTCTAATAAGACAAACTTTCCCCTGTTTCCTTCTGTTAAAGGTGGCCGAG GATGTGATATGTAGCCCAACAGGTTTCAGAGTTGATGCCTGTCTCGTGGAATTAGGTGGG CTTTGCAGATGATATAGTAAACATTTCCTGTGCCTTTGCCATTAGTTTACATGCGTTGTC ATCTCGTTTTTGCATGCCTAATTTGATTATATGAATATGATATTTGAAAATTTTTCATAG AGTTATACAGAGAAATATGTTCTACTGCGCATTTTGGTGCAAACTATTCCACTTATATTT TTTATTCTAATGTTCCTGGTGTAATTTTGATGATACACTTACCATCCTAGGATTAATATG GTGATAGATTCTTGTTGGGGACTGTCCAAATAAAGATCTTCCCTTATATATATTGTTATC AACAAAGCATGAACATTATTAAAAAGTTTTGTTCCATATATTAGTGATTGCATAAAGGAT GAGGCTTTTAGCCAATCAACTTACTTTCCACAATAATCTGATTTTATCAATTCGTCATGT TGCGTTCCTGTTAGTCAATATAACATGTACTGTAGCTCAGCTCTTGCAGATTGTTTGTCA TCCTTATTTTTAGATTTTTGTACAATTAAATATATTAACTGTATTTAGCATTTTTGGCTA CAGTTTTCTAGTTTTACATGCTTAGCTGACGTATCAGATACCACTATTTAGTTGTAATAC TTCATGATGTGTCATCCATCATGTAACATGTCTAAGATGTAGCAGCCTTGCTGAGTTGAT GTATAATAATTTAGCAGCAGCATGCAATGTTGGCAGCGTTAAATACTTATGATGCTATAT TGTCTTTGGAATTTACTAGCACCTGACATGAGTATGTATTTGTGCTGTCATGTTTCGTCA TAATTTGATAGAAGCAAATATATTATTCTACTTTAGTCTGTAGCAATGACCAAAAATGGT GCTATAACAGTTGTTTTTCTCAAATGTGCCCTCTTTTTATTTCAAAGCATTCACACTTAC ATCTGACAAATTTTCCCCATCCACAGATGATTTTCGGTTGTTTTGTGGCGATCTTGGAAA CGAAGTGAACGATGTTGTTCTTACAAAGGCATTTTCAAAATATCCATCCTTCAACATGGC TAGGGTTATTAGGGACAAATGGACTGGTAAAACTAGGGGCTATGCCTTTGTTAGTTTTGC TAATGCGTCGGATCTTGCTGCAGCATTGAAAGAGATGAATGGTAAATATGTTGGAAACAG GCCAATCAAACTACGCAAGAGCACATGGAAGAACAGAATCGACTACGAGGCATTACAGAA GCCGAAGACTCAACCACAGAAGAAGTTCAAAGCGCAGAAAAAAAGCATTCTACACAAGTG AAGTAAATTCACTCTCTAGAGAGTGATCCCTAGTGTCATGTTGCACATGAGTCCTTTGTT GCTCCTGCAATAAACGACGTTAAAGCCTTCAGCGCCCGGCGGTGCGCTTGTCACGTTTGG CCTAGTGATTGTTCTAGGGTAGTATGGCTCGTCCCAATTTGTAATGGAAATTTAGGTGTA AATATTCTAATGACTGGTACCGTTGTGAACGGTACGAAGTTCTCTTATGATGAACTCCTG TAGCGTGGAGCAATTCGATTATAAA



consensusID : consensus_6631#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence
                              [ACGTCAACAAAACCATCAAACACCTTCAATTCCCCAGATGATTTTCGGTTGTTTTGTGGCGATCTTGGAAACGAAGTGAACGATGATGTTCTTACAAAGGCATTTTCAAAATATCCATCCTTCAACATGGCTAGGGTTATTAGGGACAAATGGACTGGTAAAACTAGGGGCTATGGCTTTGTTAGTTTTGCTAATGCGTCGGATCTTGCTGCAGCATTGAAAGAGATGAATGGTAAATATGTTGGAAACAGGCCAATCAAACTACGCAAGAGCACATGGAAGAACAGAATCGACTACGAGGCATTACAGAAGCCGAAGACTCAACCCCAGAAGAAGTTCAAAGCGCAGAAAAAAAGCCTTCTACCCAAGTGAAGTAAATTCCCTCTCTAGAGAGTGATCCCTAGTGTCATGTTGCACCTGAGTCCTTTGTTGCTCCTGCAATAAACGACGTTAAAGCCTTCAGCGCCCGGCGGTGCGCTTGTCACGTTTGGCCTAGTGATTGTTCTAGGGTAGTATGGCTCGTCCCAATTTGTAATGGAAATTTAGGTGTAAATATTTTAATGACTGGTACCGTTGTGAACGGTACGAAGTTCTCTTATGATGAACTCCTGTAGCGTGGAGCAATTCGATTATAAATATTTTTTTCGGAAAAAAAAAAAAAAAA]

[-] EMBL CA762206             [ACGTCAACAAAACCATCAAACACCTTCAATTCCCCAGATGATTTTCGGTTGTTTTGTGGCGATCTTGGAAACGAAGTGAACGATGATGTTCTTACAAAGGCATTTTCAAAATATCCATCCTTCAACATGGCTAGGGTTATTAGGGACAAATGGACTGGTAAAACTAGGGGCTATGGCTTTGTTAGTTTTGCTAATGCGTCGGATCTTGCTGCAGCATTGAAAGAGATGAATGGTAAATATGTTGGAAACAGGCCAATCAAACTACGCAAGAGCACATGGAAGAACAGAATCGACTACGAGGCATTACAGAAGCCGAAGACTCAACCCCAGAAGAAGTTCAAAGCGCAGAAAAAAAGCCTTCTACCCAAGTGAAGTAAATTCCCTCTCTAGAGAGTGATCCCTAGTGTCATGTTGCACCTGAGTCCTTTGTTGCTCCTGCAATAAACGACGTTAAAGCCTTCAGCGCCCGGCGGTGCGCTTGTCACGTTTGGCCTAGTGATTGTTCTAGGGTAGTATGGCTCGTCCCAATTTGTAATGGAAATTTAGGTGTAAATATTTTAATGACTGGTACCGTTGTGAACGGTACGAAGTTCTCTTATGATGAACTCCTGTAGCGTGGAGCAATTCGATTATAAATATTTTTTTCGGAAAAAAAAAAAAAAAA]


>consensus_6631#1 ACGTCAACAAAACCATCAAACACCTTCAATTCCCCAGATGATTTTCGGTTGTTTTGTGGC GATCTTGGAAACGAAGTGAACGATGATGTTCTTACAAAGGCATTTTCAAAATATCCATCC TTCAACATGGCTAGGGTTATTAGGGACAAATGGACTGGTAAAACTAGGGGCTATGGCTTT GTTAGTTTTGCTAATGCGTCGGATCTTGCTGCAGCATTGAAAGAGATGAATGGTAAATAT GTTGGAAACAGGCCAATCAAACTACGCAAGAGCACATGGAAGAACAGAATCGACTACGAG GCATTACAGAAGCCGAAGACTCAACCCCAGAAGAAGTTCAAAGCGCAGAAAAAAAGCCTT CTACCCAAGTGAAGTAAATTCCCTCTCTAGAGAGTGATCCCTAGTGTCATGTTGCACCTG AGTCCTTTGTTGCTCCTGCAATAAACGACGTTAAAGCCTTCAGCGCCCGGCGGTGCGCTT GTCACGTTTGGCCTAGTGATTGTTCTAGGGTAGTATGGCTCGTCCCAATTTGTAATGGAA ATTTAGGTGTAAATATTTTAATGACTGGTACCGTTGTGAACGGTACGAAGTTCTCTTATG ATGAACTCCTGTAGCGTGGAGCAATTCGATTATAAATATTTTTTTCGGAAAAAAAAAAAA AAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6631#0      CCAGTAACGCCCAGGAGCTTCGAGAGAATTCCACACCATTCCCCCCTACCACCACGCGGC 60
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      GCATCATCACAATACACAGCCTCTGCTTCCCCCGGCAACCCAACCGATTCGCGCTCACGC 120
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      CACCTGCAATCCGCGACCAGACGCGCGGGCCGTTGAGATCAACAAACACATCGCACGCGA 180
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      CGCCGCGTGAGCCCGTACGATCGCCCCCTCCCGCGCCGCGCCTCCGCACTCTGGTTGGTT 240
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      GCCTCGCCGGCGATGTCGACGCAGTCCATCTCGCCCGCCGCGGCGGCCGCGTCCGCGCAG 300
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      TACTCGTACCCGGCTGCCGCGGCGGCGGCGGTCCCGTCCTACTTCCCCGTCCCGTTCCAC 360
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      CTCCAGAACGTGCAGCAGCCCGCCACCTGGCCAGCGGCGCCCGCGGCGTACAACGCCGTC 420
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      TACCCCATGCCCCAAGTCCAGCAGGTTCAGCAACTGTTCCAGAAAGATTCACAGATAATC 480
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      ACTCCTGAAGCTCTAGCTACTGTGAAAGCTGCTATTGCAAATAGTGAGAAAGACAAGAAG 540
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      ATTGAAGCAAACAAAAAGGCAGTACCTCGAAAGGCAGCTGGGCAATCTTGGGAGGATCCA 600
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      ACTTTGGCTGACTGGCCCGAAATGTGACTTTCCCCTCGTCTGAACTTGTCTGAATGTCTG 660
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      TTATCCTCACGTCAACAGACCATCAAACACCTTCAATTCCCCAGGCAAGATCTAATGTTC 720
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      GATCTATGTATTCTAATAAGACAAACTTTCCCCTGTTTCCTTCTGTTAAAGGTGGCCGAG 780
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      GATGTGATATGTAGCCCAACAGGTTTCAGAGTTGATGCCTGTCTCGTGGAATTAGGTGGG 840
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      CTTTGCAGATGATATAGTAAACATTTCCTGTGCCTTTGCCATTAGTTTACATGCGTTGTC 900
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      ATCTCGTTTTTGCATGCCTAATTTGATTATATGAATATGATATTTGAAAATTTTTCATAG 960
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      AGTTATACAGAGAAATATGTTCTACTGCGCATTTTGGTGCAAACTATTCCACTTATATTT 1020
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      TTTATTCTAATGTTCCTGGTGTAATTTTGATGATACACTTACCATCCTAGGATTAATATG 1080
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      GTGATAGATTCTTGTTGGGGACTGTCCAAATAAAGATCTTCCCTTATATATATTGTTATC 1140
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      AACAAAGCATGAACATTATTAAAAAGTTTTGTTCCATATATTAGTGATTGCATAAAGGAT 1200
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      GAGGCTTTTAGCCAATCAACTTACTTTCCACAATAATCTGATTTTATCAATTCGTCATGT 1260
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      TGCGTTCCTGTTAGTCAATATAACATGTACTGTAGCTCAGCTCTTGCAGATTGTTTGTCA 1320
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      TCCTTATTTTTAGATTTTTGTACAATTAAATATATTAACTGTATTTAGCATTTTTGGCTA 1380
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      CAGTTTTCTAGTTTTACATGCTTAGCTGACGTATCAGATACCACTATTTAGTTGTAATAC 1440
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      TTCATGATGTGTCATCCATCATGTAACATGTCTAAGATGTAGCAGCCTTGCTGAGTTGAT 1500
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      GTATAATAATTTAGCAGCAGCATGCAATGTTGGCAGCGTTAAATACTTATGATGCTATAT 1560
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      TGTCTTTGGAATTTACTAGCACCTGACATGAGTATGTATTTGTGCTGTCATGTTTCGTCA 1620
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      TAATTTGATAGAAGCAAATATATTATTCTACTTTAGTCTGTAGCAATGACCAAAAATGGT 1680
consensus_6631#1      ------------------------------------------------------------
                                                                                  

consensus_6631#0      GCTATAACAGTTGTTTTTCTCAAATGTGCCCTCTTTTTATTTCAAAGCATTCACACTTAC 1740
consensus_6631#1      ----------------------------------------------ACGTCAACAAAACC 14
                                                                     * *  ***    *

consensus_6631#0      ATCTGACAAATTTTCCCCATCCACAGATGATTTTCGGTTGTTTTGTGGCGATCTTGGAAA 1800
consensus_6631#1      ATCAAACA---CCTTCAATTCCCCAGATGATTTTCGGTTGTTTTGTGGCGATCTTGGAAA 71
                      ***  ***     * *   *** *************************************

consensus_6631#0      CGAAGTGAACGATGTTGTTCTTACAAAGGCATTTTCAAAATATCCATCCTTCAACATGGC 1860
consensus_6631#1      CGAAGTGAACGATGATGTTCTTACAAAGGCATTTTCAAAATATCCATCCTTCAACATGGC 131
                      ************** *********************************************

consensus_6631#0      TAGGGTTATTAGGGACAAATGGACTGGTAAAACTAGGGGCTATGCCTTTGTTAGTTTTGC 1920
consensus_6631#1      TAGGGTTATTAGGGACAAATGGACTGGTAAAACTAGGGGCTATGGCTTTGTTAGTTTTGC 191
                      ******************************************** ***************

consensus_6631#0      TAATGCGTCGGATCTTGCTGCAGCATTGAAAGAGATGAATGGTAAATATGTTGGAAACAG 1980
consensus_6631#1      TAATGCGTCGGATCTTGCTGCAGCATTGAAAGAGATGAATGGTAAATATGTTGGAAACAG 251
                      ************************************************************

consensus_6631#0      GCCAATCAAACTACGCAAGAGCACATGGAAGAACAGAATCGACTACGAGGCATTACAGAA 2040
consensus_6631#1      GCCAATCAAACTACGCAAGAGCACATGGAAGAACAGAATCGACTACGAGGCATTACAGAA 311
                      ************************************************************

consensus_6631#0      GCCGAAGACTCAACCACAGAAGAAGTTCAAAGCGCAGAAAAAAAGCATTCTACACAAGTG 2100
consensus_6631#1      GCCGAAGACTCAACCCCAGAAGAAGTTCAAAGCGCAGAAAAAAAGCCTTCTACCCAAGTG 371
                      *************** ****************************** ****** ******

consensus_6631#0      AAGTAAATTCACTCTCTAGAGAGTGATCCCTAGTGTCATGTTGCACATGAGTCCTTTGTT 2160
consensus_6631#1      AAGTAAATTCCCTCTCTAGAGAGTGATCCCTAGTGTCATGTTGCACCTGAGTCCTTTGTT 431
                      ********** *********************************** *************

consensus_6631#0      GCTCCTGCAATAAACGACGTTAAAGCCTTCAGCGCCCGGCGGTGCGCTTGTCACGTTTGG 2220
consensus_6631#1      GCTCCTGCAATAAACGACGTTAAAGCCTTCAGCGCCCGGCGGTGCGCTTGTCACGTTTGG 491
                      ************************************************************

consensus_6631#0      CCTAGTGATTGTTCTAGGGTAGTATGGCTCGTCCCAATTTGTAATGGAAATTTAGGTGTA 2280
consensus_6631#1      CCTAGTGATTGTTCTAGGGTAGTATGGCTCGTCCCAATTTGTAATGGAAATTTAGGTGTA 551
                      ************************************************************

consensus_6631#0      AATATTCTAATGACTGGTACCGTTGTGAACGGTACGAAGTTCTCTTATGATGAACTCCTG 2340
consensus_6631#1      AATATTTTAATGACTGGTACCGTTGTGAACGGTACGAAGTTCTCTTATGATGAACTCCTG 611
                      ****** *****************************************************

consensus_6631#0      TAGCGTGGAGCAATTCGATTATAAA---------------------------- 2365
consensus_6631#1      TAGCGTGGAGCAATTCGATTATAAATATTTTTTTCGGAAAAAAAAAAAAAAAA 664
                      *************************                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)