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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6633#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 4126 fasta sequence
[TTCCTCTCGCTCCCACCAAGACCAACCAAACCCCTGTTTCTCCCTCAAAACCTCCCTCTCTTTCCCCCCCGAATGCTCGAGCGCTGCGCGGCGGAATCCCCTACTCCCCTCCGATGAGGCCCTCGCCGCCTCCCGCCGCCCCGGCGGCGGAACCGGTGCCCCCGTGGCTGAGATCGCTGCCCGTCGCGCCCGAGTTCCGCCCCACCGCCGCCGAGTTCGCCGATCCCGTCTCCTACATCCTCAAGATCGAGCCCGCCGCGGCGCCGTACGGCATCTGCAAGGTCGTGCCGCCGTTGCCCCCGCCGCCGAAGAAGGCCACCTTCTCCAACCTCTCCCGCTCCTTCGCCGCGCTCCACCCGGACGACCGCTCGCCGTCCTTCCCCACCCGCCACCAGCAGGTCGGCCTCTGCCCGCGCCGCACGCGCCCGGGGCTCAAGCCCGTGTGGCGGTCCTCCCACCGCTACACGCTCCCGCAGTTCGAGTCCAAGGCCGGCGCCACCCGCAAGTCGCTCCTCGCCGGCCTCAACTTCCCTGCCTCCAGGCAACTCACCCCGCTCGACCACGAGGTGCTCTTCTGGCGCGCATCGGCCGACCGCCCCATCGTGGTCGAGTATGGCAGCGACATGTCGGGCTCGGGATTCTCCCCTTGCGCCGCGCAGCCGCAGCCGCCGCCGCAGCAGCAACCGACGGCGCGGGCGGCGGCGCACCTTGGGGAGACGGCGTGGAACATGCGCGGCGTGGCTAGGAGCCCCGGATCGCTGCTGCGGTTCATGCCGGAGGATGTCCCCGGGGTCACCACGCCGATGCTCTACGTCGGGATGATGTTCAGTTGGTTCGCGTGGCACGTCGAGGACCACGACCTGCACAGCCTCAACTACATGCACCTCGGGGCCGCCAAGACGTGGTACGGCGTGCCGCGCGACGCCGCGCTCGCGTTCGAGGACGTGGTGCGCGAACATGGCTACGGCGGGGAGGTGAACCCCCTAGAAACCTTCGCTACATTGGGGCAGAAAACAACAGTGATGTCCCCTGAAGTGCTTGTGGAGTCGGGTATCCCCTGCTGCAGATTGGTGCAGAATGCAGGGGAATTTGTGGTCACTTTTCCAGGATCTTATCACTGCGGTTTCAGTCATGGATTCAACTGTGGGGAAGCATCAAATATAGCTACTCCTGAATGGTTGAGAATAGCAAAAGAGGCAGCAATCCGAAGAGCTTCAATCAATCGTCCTCCCATGGTTTCGCACTATCAATTACTTTACGATCTCGCACTGTCTATGCGTTTTAGGGAACCATCCAATGGTGAAATGGAGACACGGAGCTCTCGAATAAAGGAGAAGAAGAAATGCGAAGGGGAACAACTGGTCAAGAAGATGTTCATCCAAAATGTTATTGAAGATAATGAACTGCTTAGTCATCTTCTAAATGACGGATCATCTTGTATTATTCTTCCAGCAAATGCCCATGATGGTCCTGGTCTTTCTACTTTGCGCTCAACAGATCAATCAAATATGAATTCCAGAATATCACATAACCTATGCAGTAGGGAAGAAGCTCCAGAAGCCTCAGGATGCTTATCGCCGAACAGGAATGGTGATACCAGAAATTGTATTTCATCAGATACGCATAACATGGAAGGTGATAAGGGAGATATAATGAGCGCTACTGGATTGTTAGATCAGGGTCTATTATCATGTGTCACTTGTGGAATTTTAAGTTTTTCATGTGTGGCTGTACTCAAACCAAGAGATTCTACAGCACGATACTTGATGTCTGCTGATTCTAATTCAATTAATAACCAGCTTTCTATTTCTGGAGGGAGTATTCTGGCAGATGCGCCAACAAATGAAAGGAATGGTGTCATTTCTCGTCCATATTCTGAACACTGTTGCAACGAAATAATGGCCGATGATGCAGAAATCGATAAGAATTCTGCTCTTGATCTCTTGGCATTTGCTCATGGGGGTCAACCAGATCCTGAAGAAGATCCACTGGAGAAAATACTGAAGATTGCACATGGCATTAACAAATCACAACCTAATAGTTCAAATAATGTTGGTTGTGTTGGAACAAAGCTGTCCTCAAGTAGCACAGAGCGCCAAGAAAGACCATCTTCCCAGAACGCTCATTGTAATGGTAGCTCAGTTATTTCAAATGGACCGAAAGGTGTTCGCACGAGAAATAAGTATCAACTTAAGATGGTACTTTCTGAAGGTTTTCAGGCAAAGGATATCTATTCTGCGAAGGAAAAGAAGGTTCAATCAGAACCATCAAGCTCAAAAGGGGATGTTAGGGAGACAATTGATGTTAGTGGCACAGAGAACGATGTCGGATGTAAAAGCACTACAATCTCTGTCAGTGAACACAGGGGTTCTACAAAGAATATGTATTCAGTGAAGGAAAATAAGGTTCAATCGAAACCATCAAGCTTAAAGGGGACTGTTAAAGAGACAGTTGATGTCAGTGGCACAGAGAACGATGCTAGATGTAAAAGCATTACAATCTCTGTCAGTGAACACA-GGGGTTCTACACCTATGACCAATAGTTTAGCTGCATCAAT-CGTGAAA-CCTGACAAGGATTCATCAAGAATGCAT-GTATTTTGTCTTGAGCATGCTATTGAGGTTGAGAAGCAACTGCATGCTATAGGTGGTTCTAATATTATGCTTATATGTCGTCCAGAATATCCCAAAATAGAAGCGGAAGCAAGATTGTTGGGTGAAGAAATGGGACTGGTATATGACTGGAAGGGCATTCATTTCAAGGAGGCCAACATGGAGGACAGGCAGAAGATACAGGAAGTTCTGCGGGATGAGGAAGCAATACCTACAAGCAGTGATTGGGCTGTAAAATTGGGTATTAACCTTTATTATAGTGCAAATCTGGCCAAATCTCCTTTATATAACAAACAAATGCCATACAACAGAGTCATTTATAGGGCATTTGGCTGTGATTCTCCTAATGACTCGCCAGTAATGTTCAATACTTGCGAAAGGAAACAAAGCCACCAGAAGAAAATAGTGGTTGCTGGCCGGTGGTGTGGGAAAG-TATGGATGTCAAAACAGGTCCATCCATACTTGGCTCACAGAGTTGAAAGCCAGGAAGCGGAAGAAGCAGATAGAATCTGTTCTTATCATTTTGATGAGAAGCACAAAGCTGAGCCAGTTGGGAATTCTAGTAGAGTGGAAGCCTCCAAAAGAAAGAGTAGCAGTTTGACAGACGTAACAGAATCAAGCAATAGAAGGGGGGAAATACCTGGTGAGGAAACAAACACCAAGAGGCCCAAACATTCTCAAGAGAACAATCTCAGAGCTTTGGAAACCGCTGCTGAAGTTGTGGTGCCCTCACCAGCTGGAACAGGTCTCCGCGTTAGCTCCAGGATTGCCAACAGGGCAAACAAGCTAAAATCAAAGATGGAAAAGGAGGATGTCCCTTCTAGCCGTCCAAAGTCTAACATAAAGGAGAAAAGCAGTCATGCTAGCGGTCAGAAATCAAATGTTCAAGAGGCGAATGCTAATTCTGCTAGCCATTTGAGAGCAATGCCACCAAAACAGAAGGCTGAAGCAGAAGCAAAGAAGCAAATAAGAACTCCAAAACCTCCAAAGCAAGCAGTGGAGTACTCGTGCGATATTGAGGGTTGTTCTATGAGTTTTCGTACAAAGCGGGACTTGTCTCTGCACAAGAGTGATATCTGCCCAGTGAAAGGCTGCGGGAAGAAGTTCTTCTCGCACAAGTATCTGCTGCAGCATCGCAAGGTTCACACAGATGACCGTCCGCTAACATGCCCATGGAAGGGCTGCAACATGGCATTCAAGTGGCCATGGGCAAGGACTGAACATCTCAGGGTTCATACAGGCGACAGGCCCTATGTTTGCCATGAGCCAGGTTGCGCACAGACATTCAGGTTTGTCTCAGATTTCAGCCGTCACAAGCGCAAGACAGGTCATTCTGTCAAGAAGAAGAAGAAAGCAAAGAGTTGAGCTCGTATTACAGCAAGCTAGTTATGGTAGAACCGGACGCAGTAGGAGGTAGTTTGTACATTCTACTTCACTAGTTTAGCACTGATCTCTCTATCTGACGGATTCTGTTGGCACCACAATCGGTGTGCTTTGTGTTAGTTTATATTAGTTTT]
[+] EMBL AK068952 [TTCCTCTCGCTCCCACCAAGACCAACCAAACCCCTGTTTCTCCCTCAAAACCTCCCTCTCTTTCCCCCCCGAATGCTCGAGCGCTGCGCGGCGGAATCCCCTACTCCCCTCCGATGAGGCCCTCGCCGCCTCCCGCCGCCCCGGCGGCGGAACCGGTGCCCCCGTGGCTGAGATCGCTGCCCGTCGCGCCCGAGTTCCGCCCCACCGCCGCCGAGTTCGCCGATCCCGTCTCCTACATCCTCAAGATCGAGCCCGCCGCGGCGCCGTACGGCATCTGCAAGGTCGTGCCGCCGTTGCCCCCGCCGCCGAAGAAGGCCACCTTCTCCAACCTCTCCCGCTCCTTCGCCGCGCTCCACCCGGACGACCGCTCGCCGTCCTTCCCCACCCGCCACCAGCAGGTCGGCCTCTGCCCGCGCCGCACGCGCCCGGGGCTCAAGCCCGTGTGGCGGTCCTCCCACCGCTACACGCTCCCGCAGTTCGAGTCCAAGGCCGGCGCCACCCGCAAGTCGCTCCTCGCCGGCCTCAACTTCCCTGCCTCCAGGCAACTCACCCCGCTCGACCACGAGGTGCTCTTCTGGCGCGCATCGGCCGACCGCCCCATCGTGGTCGAGTATGGCAGCGACATGTCGGGCTCGGGATTCTCCCCTTGCGCCGCGCAGCCGCAGCCGCCGCCGCAGCAGCAACCGACGGCGCGGGCGGCGGCGCACCTTGGGGAGACGGCGTGGAACATGCGCGGCGTGGCTAGGAGCCCCGGATCGCTGCTGCGGTTCATGCCGGAGGATGTCCCCGGGGTCACCACGCCGATGCTCTACGTCGGGATGATGTTCAGTTGGTTCGCGTGGCACGTCGAGGACCACGACCTGCACAGCCTCAACTACATGCACCTCGGGGCCGCCAAGACGTGGTACGGCGTGCCGCGCGACGCCGCGCTCGCGTTCGAGGACGTGGTGCGCGAACATGGCTACGGCGGGGAGGTGAACCCCCTAGAAACCTTCGCTACATTGGGGCAGAAAACAACAGTGATGTCCCCTGAAGTGCTTGTGGAGTCGGGTATCCCCTGCTGCAGATTGGTGCAGAATGCAGGGGAATTTGTGGTCACTTTTCCAGGATCTTATCACTGCGGTTTCAGTCATGGATTCAACTGTGGGGAAGCATCAAATATAGCTACTCCTGAATGGTTGAGAATAGCAAAAGAGGCAGCAATCCGAAGAGCTTCAATCAATCGTCCTCCCATGGTTTCGCACTATCAATTACTTTACGATCTCGCACTGTCTATGCGTTTTAGGGAACCATCCAATGGTGAAATGGAGACACGGAGCTCTCGAATAAAGGAGAAGAAGAAATGCGAAGGGGAACAACTGGTCAAGAAGATGTTCATCCAAAATGTTATTGAAGATAATGAACTGCTTAGTCATCTTCTAAATGACGGATCATCTTGTATTATTCTTCCAGCAAATGCCCATGATGGTCCTGGTCTTTCTACTTTGCGCTCAACAGATCAATCAAATATGAATTCCAGAATATCACATAACCTATGCAGTAGGGAAGAAGCTCCAGAAGCCTCAGGATGCTTATCGCCGAACAGGAATGGTGATACCAGAAATTGTATTTCATCAGATACGCATAACATGGAAGGTGATAAGGGAGATATAATGAGCGCTACTGGATTGTTAGATCAGGGTCTATTATCATGTGTCACTTGTGGAATTTTAAGTTTTTCATGTGTGGCTGTACTCAAACCAAGAGATTCTACAGCACGATACTTGATGTCTGCTGATTCTAATTCAATTAATAACCAGCTTTCTATTTCTGGAGGGAGTATTCTGGCAGATGCGCCAACAAATGAAAGGAATGGTGTCATTTCTCGTCCATATTCTGAACACTGTTGCAACGAAATAATGGCCGATGATGCAGAAATCGATAAGAATTCTGCTCTTGATCTCTTGGCATTTGCTCATGGGGGTCAACCAGATCCTGAAGAAGATCCACTGGAGAAAATACTGAAGATTGCACATGGCATTAACAAATCACAACCTAATAGTTCAAATAATGTTGGTTGTGTTGGAACAAAGCTGTCCTCAAGTAGCACAGAGCGCCAAGAAAGACCATCTTCCCAGAACGCTCATTGTAATGGTAGCTCAGTTATTTCAAATGGACCGAAAGGTGTTCGCACGAGAAATAAGTATCAACTTAAGATGGTACTTTCTGAAGGTTTTCAGGCAAAGGATATCTATTCTGCGAAGGAAAAGAAGGTTCAATCAGAACCATCAAGCTCAAAAGGGGATGTTAGGGAGACAATTGATGTTAGTGGCACAGAGAACGATGTCGGATGTAAAAGCACTACAATCTCTGTCAGTGAACACAGGGGTTCTACAAAGAATATGTATTCAGTGAAGGAAAAGAAGGTTCAATCGAAACCATCAAGCTTAAAGGGGACTGTTAAAGAGACAGTTGATGTCAGTGGCACAGAGAACGATGCTAGATGTAAAAGCATTACAATCTCTGTCAGTGAACACA GGGGTTCTACACCTATGACCAATAGTTTAGCTGCATCAAT CGTGAAA CCTGACAAGGATTCATCAAGAATGCAT GTATTTTGTCTTGAGCATGCTATTGAGGTTGAGAAGCAACTGCATGCTATAGGTGGTTCTAATATTATGCTTATATGTCGTCCAGAATATCCCAAAATAGAAGCGGAAGCAAGATTGTTGGGTGAAGAAATGGGACTGGTATATGACTGGAAGGGCATTCATTTCAAGGAGGCCAACATGGAGGACAGGCAGAAGATACAGGAAGTTCTGCGGGATGAGGAAGCAATACCTACAAGCAGTGATTGGGCTGTAAAATTGGGTATTAACCTTTATTATAGTGCAAATCTGGCCAAATCTCCTTTATATAACAAACAAATGCCATACAACAGAGTCATTTATAGGGCATTTGGCTGTGATTCTCCTAATGACTCGCCAGTAATGTTCAATACTTGCGAAAGGAAACAAAGCCACCAGAAGAAAATAGTGGTTGCTGGCCGGTGGTGTGGGAAAG TATGGATGTCAAAACAGGTCCATCCATACTTGGCTCACAGAGTTGAAAGCCAGGAAGCGGAAGAAGCAGATAGAATCTGTTCTTATCATTTTGATGAGAAGCACAAAGCTGAGCCAGTTGGGAATTCTAGTAGAGTGGAAGCCTCCAAAAGAAAGAGTAGCAGTTTGACAGACGTAACAGAATCAAGCAATAGAAGGGGGGAAATACCTGGTGAGGAAACAAACACCAAGAGGCCCAAACATTCTCAAGAGAACAATCTCAGAGCTTTGGAAACCGCTGCTGAAGTTGTGGTGCCCTCACCAGCTGGAACAGGTCTCCGCGTTAGCTCCAGGATTGCCAACAGGGCAAACAAGCTAAAATCAAAGATGGAAAAGGAGGATGTCCCTTCTAGCCGTCCAAAGTCTAACATAAAGGAGAAAAGCAGTCATGCTAGCGGTCAGAAATCAAATGTTCAAGAGGCGAATGCTAATTCTGCTAGCCATTTGAGAGCAATGCCACCAAAACAGAAGGCTGAAGCAGAAGCAAAGAAGCAAATAAGAACTCCAAAACCTCCAAAGCAAGCAGTGGAGTACTCGTGCGATATTGAGGGTTGTTCTATGAGTTTTCGTACAAAGCGGGACTTGTCTCTGCACAAGAGTGATATCTGCCCAGTGAAAGGCTGCGGGAAGAAGTTCTTCTCGCACAAGTATCTGCTGCAGCATCGCAAGGTTCACACAGATGACCGTCCGCTAACATGCCCATGGAAGGGCTGCAACATGGCATTCAAGTGGCCATGGGCAAGGACTGAACATCTCAGGGTTCATACAGGCGACAGGCCCTATGTTTGCCATGAGCCAGGTTGCGCACAGACATTCAGGTTTGTCTCAGATTTCAGCCGTCACAAGCGCAAGACAGGTCATTCTGTCAAGAAGAAGAAGAAAGCAAAGAGTTGAGCTCGTATTACAGCAAGCTAGTTATGGTAGAACCGGACGCAGTAGGAGGTAGTTTGTACATTCTACTTCACTAGTTTAGCACTGATCTCTCTATCTGACGGATTCTGTTGGCACCACAATCGGTGTGCTTTGTGTTAGTTTATATTAGTTTT]
[+] EMBL BF475204 [ AGGTTTTCAGGCAAAGGATATCTATTCTGCGAAGGAAAAGAAGGTTCAATCAGAACCATCAAGCTCAAAAGGGGATGTTAAGGAGACAATTGATGTTAGTGGCACAGAGAACGATGTCGGATGTAAAAGCACTACAATCTCTGTCAGTGAACACAGGGGTTCTACAAAGAATATGTATTCAGTGAAGGAAAATAAGGTTCAATCGAAACCATCAAGCTTAAAGGGGACTGTTAAAGAGACAGTTGATGTCAGTGGCACAGAGAACGATGCTAGATGTAAAAGCATTACAATCTCTGTCACTGAACACAGGGGGTTCTACACCTATGACCAATAGTTTAGGTGCATCAATCCGTGAAACCCTGACAAGGATTCATCACAAATGGATGGTATTTggg ]
[+] EMBL CA764500 [ TGATGTTAGTGGCACAGAGAACGATGTCGGATGTAAAAGCACTACAATCTCTGTCAGTGAACACAGGGGTTCTACAAAGAATATGTATCCAGTGAAGGAAAATAAGGTTCAATCGAAACCATCAAGCTTAAAGGGGACTGTTAAAGAGACAGTTGATGTCAGTGGCACAGAGAACGATGCTAGATGTAAAAGCATTACAATCTCTGTCAGTGAACACA GGGGTTCTACACCTATGACCAATAGTTTAGCTGCATCAAT CGTGAAA CCTGACAAGGATTCATCAAGAATGCAT GTATTTTGTCTTGAGCATGCTATTGAGGTTGAGAAGCAACTGCATGCTATAGGTGGTTCTAATATTATGCTTATATGTCGTCCAGAATATCCCAAAATAGAAGCGGAAGCAAGATTGTTGGGTGAAGAAATGGGACTGGTATATGACTGGAAGGGCATTCATTTCAAGGAGGCCAACATGGAGGACAGGCAGAAGATACAGGAAGTTCTGCGGGATGAGGAAGCAATACCTATAAGCAGTGATTGGGCTGTAAAATTGGGTATTAACCTTTATTATAGTGCAAATCTGGCCAAATCTCCTTTATATAACAAACAAATGCCATACAACAGAGTCATTTATAGGGCATTTGGCTGNGATTCTCCTAATGACTCGCCAGTAATGGTCAATACTTGCGAAAGGAAACAAAGCCACCAGAAGAAAATAGTGGTTGCTGGCCGGTGGTGTGGGAAAGTTTTGGATGGCAAAACAGGTCCATCCATACTTGGCTCACAGAGTTG AAGCCAGGAAGCGGAANAAGCAGATAGAATCTGGTCTTATCANTTTGATGANAGGCNC AAGCTGAGCCAGTTGGG ]
[-] EMBL BF475236 [ ACTTGTCTCTGCACAAGAGTGATATCTGCCCAGTGAAAGGCTGCGGGAAGAAGTTCTTCTCGCACAAGTATCTGCTGCAGCATCGCAAGGTTCACACAGATGACCGTCCGCTAACATGCCCATGGAAGGGCTACAACATGGCATTCAAGTGGCCATGGGCAGGGACTGAACATCTCAGGGTTCATACAGGCGACAGGCCCTATGTTTGCCATGAGCCAGGTTGCGCACAGACATTCAGGTTTGTCTCAGATTTCAGCCGTCACAAGCGCAAGACAGGTCATTCTGTCAAGAAGAAGAAGAAAGCAAAGAGTTGAGCTCGTATTACAGCAAGCTAGTTATGGTAGAACCGGACGCAGTAGGAG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||