cluster # 6634

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6634 cluster # 6634 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6634#0 length = 1523 sequences # 4
consensusID : consensus_6634#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1523
fasta sequence
                              [AATAGGGGGGAAGAGAGATTTCCCTCGCGCGCTTNTCGTTCGCCTTCTTCCCCTTTGCGGATTTNAATCCGCTCGGGGGCGCTATTACCTATTGGCGCCGCGGCGGCGGCGGC-GGCGATTTGAGTCGGGATCCCGCTCGATGGCGGAGGGCTTCGGGCGGTGGGAGGCGGATCCGCTCTTCCCCGCCGCCGAGTGCGTGCAGGACTCCGCCGACAGGATGGAGGGTGTGTACCGCTTGCTCTTGCATGAAAGAAAACTGATACAAGATGATACCTCACATACAAAACGTCGTGTATCAATGCAGTATGAGAGAGATGTG-TGCACTGCTCTTGGAACAACAAAGTGGCAGTTGGAGCAA-TTTGAGCGAGAAG-TGAATGCAGCGGCA-TTGTCTAA-TAAGTCAAATTCAAGGGAAAATGCCATCTTGCAATTTAGGCAATTTATTAGAGCTATAGCGGAGCAAATTTCTCAGGTGGAAGATAGTTTGGAGAGTCTTAGGAATGATTCCATTAGAACACCAAAACATTCATACTTGACTGAACATGATGGAGATGAATTGGCATCTTTTCTTTCTGGTAGTAATAGAAAGGATAATCATGTGATTTATTCCACTGGAACAGATGAAATTGTTGAGCTCAAGCTTGATAGTGTTCCTGCAGTAAATGGTTATCATTCCACCCAAGAACGTACATCATGTGAATTCAGATATTCAGGAGAAGATGTGGAAGGAGCAGCCAAGCCTCAATGTTCATGCGGGGAAAATGCATGTGAAGGAGATCATAATGGTAGCAGTATGCGTGGTTTGGATTCTGATGATTCAATAGGTAGGAAGCATCATTTCAGGAGCAAACTGAGCAGGAAATACCACAGTTTTATGCGGAATTTATGGTTTACAAATAGAGGACGTGAGAGTTTTACAAAGAGGAGGAAAGATGGAGAAGTTATGGATAGCTTGAGAAATGGAAGTACATTACCTTCATTCAATCTACCTCCAGCTGGAAGGGCTATGTATTTCTGGCCTGAGCTTATCAAGAGGAGATTAAGTAAATTTAAATGCTCTACACATCACAAGCATCTTCAAGTCCGTTTAGCAACAGTACTACTAATTGCCCTTGCTGTACTTGGCTTGCTGGTTTTGCATGTGAGATGACTGGGAGCAGTATCCGGTTTTGGTCCCTGTTGTGTACGTGCCAATCGCCATGTTGCACTGTACCAATCAATCATTTTCATAGTTCCTGATGGGGGAGGATCCGTGTGCTATTGAGCACCATTTGCTATTTTATATTGCCATTCGAGGGAGACATAGGTTTGGCGTCATTTGATTGCTCCTAAGTAGCCTGGACCAGCACTGACATGAGCTGTGATTTTCCACAAATCCACATTTTTTGTTCAGAACTGCCACGTGAATACACGATGTATTGTATTGGCTTGTTTGTGATACTTGCACAATCAAGTAATCAACCATTGTCTGATCAGTAAGATGACAAAGTCTTCTCCAGATTTTTACGGTAGCAATCCTGTTAATA]

[+] EMBL OSS2955A             [AATAGGGGGGAAGAGAGATTTCCCTCGCGCGCTTNTCGTTCGCCTTCTTCCCCTTTGCGGATTTNAATCCGCTCGGGGGCGCTATTACCTATTGGCGCCGCGGCGGC GTGGCNGGCGATTTGAGTCGGGATCCCGCTCGATGGCGGAGGGCTTCGGGNGNNNGGAGGCGGATCCGNTCTTCCCCGCCGNCGAGTGCGTNCAGGACTCCGCCGACAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK071068             [             AGAGATTTCCCTCGCGCGCTTGTCGTTCGCCTTCTTCCCCTTTGCGGATTTGAATCCGCTCGGGGGCGCTATTACCTATTGGCGCCGCGGCGGCGGCGGC GGCGATTTGAGTCGGGATCCCGCTCGATGGCGGAGGGCTTCGGGCGGTGGGAGGCGGATCCGCTCTTCCCCGCCGCCGAGTGCGTGCAGGACTCCGCCGACAGGATGGAGGGTGTGTACCGCTTGCTCTTGCATGAAAGAAAACTGATACAAGATGATACCTCACATACAAAACGTCGTGTATCAATGCAGTATGAGAGAGATGTG TGCACTGCTCTTGGAACAACAAAGTGGCAGTTGGAGCAA TTTGAGCGAGAAG TGAATGCAGCGGCA TTGTCTAA TAAGTCAAATTCAAGGGAAAATGCCATCTTGCAATTTAGGCAATTTATTAGAGCTATAGCGGAGCAAATTTCTCAGGTGGAAGATAGTTTGGAGAGTCTTAGGAATGATTCCATTAGAACACCAAAACATTCATACTTGACTGAACATGATGGAGATGAATTGGCATCTTTTCTTTCTGGTAGTAATAGAAAGGATAATCATGTGATTTATTCCACTGGAACAGATGAAATTGTTGAGCTCAAGCTTGATAGTGTTCCTGCAGTAAATGGTTATCATTCCACCCAAGAACGTACATCATGTGAATTCAGATATTCAGGAGAAGATGTGGAAGGAGCAGCCAAGCCTCAATGTTCATGCGGGGAAAATGCATGTGAAGGAGATCATAATGGTAGCAGTATGCGTGGTTTGGATTCTGATGATTCAATAGGTAGGAAGCATCATTTCAGGAGCAAACTGAGCAGGAAATACCACAGTTTTATGCGGAATTTATGGTTTACAAATAGAGGACGTGAGAGTTTTACAAAGAGGAGGAAAGATGGAGAAGTTATGGATAGCTTGAGAAATGGAAGTACATTACCTTCATTCAATCTACCTCCAGCTGGAAGGGCTATGTATTTCTGGCCTGAGCTTATCAAGAGGAGATTAAGTAAATTTAAATGCTCTACACATCACAAGCATCTTCAAGTCCGTTTAGCAACAGTACTACTAATTGCCCTTGCTGTACTTGGCTTGCTGGTTTTGCATGTGAGATGACTGGGAGCAGTATCCGGTTTTGGTCCCTGTTGTGTACGTGCCAATCGCCATGTTGCACTGTACCAATCAATCATTTTCATAGTTCCTGATGGGGGAGGATCCGTGTGCTATTGAGCACCATTTGCTATTTTATATTGCCATTCGAGGGAGACATAGGTTTGGCGTCATTTGATTGCTCCTAAGTAGCCTGGACCAGCACTGACATGAGCTGTGATTTTCCACAAATCCACATTTTTTGTTCAGAACTGCCACGTGAATACACGATGTATTGTATTGGCTTGTTTGTGATACTTGCACAATCAAGTAATCAACCATTGTCTGATCAGTAAGATGACAAAGTCTTCTCCAGATTTTTACGGTAGCAATCCTGTTAATA]
[+] EMBL AU077594             [                                                                                                   GCGGC GCGGCG   GGCGATTTGAGTCGGGATCCCGCTCGATGGCGGAGGGCTTCGGGCGGTGGGAGGCGGATCCGCTCTTCCCCGCCGCCGAGTGCGTGCAGGACTCCGCCGACAGGATGGAGGGTGTGTACCGCTTGCTCTTGCATGAAAGAAAACTGATACAAGATGATACCTCACATACAAAACGTCGTGTATCAATGCAGTATGAGAGAGATGTGTTGCACTGCTCTTGGAACAACAAAGTGGCAGTTGGAGCAATTTTGAGCGANAAGTTGAATGCAGCGGCATTTGTCTAANAAAGTCAAATTCNAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU174275             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CACATCACAAGCATCTTCAAGTCCGTTTAGCAACAGTACTACTAATTGCCCTTGCTGTACTTGGCTTGCTGGTTTTGCATGTGAGATGACTGGGAGCAGTATCCGGTTTTGGTCCCTGTTGTGTACGTGCCAATCGCCATGTTGCACTGTACCAATCAATCATTTTCATAGTTCCTGATGGAGGAGGATCCGTGTGCTATTGAGCACCATTTGCTATTTTATATTGCCATTCGAGGGAGACATAGGTTTGGCGTCATTTGATTGCTCCTAAGTAGCCTGGACCAGCACTGACATGAGCTGTGATTTTCCACAAATCCACATTTTTTGTTCAGAACTGCCACGTGAATACACGATGTATTGTATTGGCTTGTTTGTGATACTTGCACAATCAAGTAATCAACCATTGTCTGATCAGTAAGATGACAAAGTTTTCTCCAGAaaaaaa                    ]




>consensus_6634#0
AATAGGGGGGAAGAGAGATTTCCCTCGCGCGCTTNTCGTTCGCCTTCTTCCCCTTTGCGG
ATTTNAATCCGCTCGGGGGCGCTATTACCTATTGGCGCCGCGGCGGCGGCGGCGGCGATT
TGAGTCGGGATCCCGCTCGATGGCGGAGGGCTTCGGGCGGTGGGAGGCGGATCCGCTCTT
CCCCGCCGCCGAGTGCGTGCAGGACTCCGCCGACAGGATGGAGGGTGTGTACCGCTTGCT
CTTGCATGAAAGAAAACTGATACAAGATGATACCTCACATACAAAACGTCGTGTATCAAT
GCAGTATGAGAGAGATGTGTGCACTGCTCTTGGAACAACAAAGTGGCAGTTGGAGCAATT
TGAGCGAGAAGTGAATGCAGCGGCATTGTCTAATAAGTCAAATTCAAGGGAAAATGCCAT
CTTGCAATTTAGGCAATTTATTAGAGCTATAGCGGAGCAAATTTCTCAGGTGGAAGATAG
TTTGGAGAGTCTTAGGAATGATTCCATTAGAACACCAAAACATTCATACTTGACTGAACA
TGATGGAGATGAATTGGCATCTTTTCTTTCTGGTAGTAATAGAAAGGATAATCATGTGAT
TTATTCCACTGGAACAGATGAAATTGTTGAGCTCAAGCTTGATAGTGTTCCTGCAGTAAA
TGGTTATCATTCCACCCAAGAACGTACATCATGTGAATTCAGATATTCAGGAGAAGATGT
GGAAGGAGCAGCCAAGCCTCAATGTTCATGCGGGGAAAATGCATGTGAAGGAGATCATAA
TGGTAGCAGTATGCGTGGTTTGGATTCTGATGATTCAATAGGTAGGAAGCATCATTTCAG
GAGCAAACTGAGCAGGAAATACCACAGTTTTATGCGGAATTTATGGTTTACAAATAGAGG
ACGTGAGAGTTTTACAAAGAGGAGGAAAGATGGAGAAGTTATGGATAGCTTGAGAAATGG
AAGTACATTACCTTCATTCAATCTACCTCCAGCTGGAAGGGCTATGTATTTCTGGCCTGA
GCTTATCAAGAGGAGATTAAGTAAATTTAAATGCTCTACACATCACAAGCATCTTCAAGT
CCGTTTAGCAACAGTACTACTAATTGCCCTTGCTGTACTTGGCTTGCTGGTTTTGCATGT
GAGATGACTGGGAGCAGTATCCGGTTTTGGTCCCTGTTGTGTACGTGCCAATCGCCATGT
TGCACTGTACCAATCAATCATTTTCATAGTTCCTGATGGGGGAGGATCCGTGTGCTATTG
AGCACCATTTGCTATTTTATATTGCCATTCGAGGGAGACATAGGTTTGGCGTCATTTGAT
TGCTCCTAAGTAGCCTGGACCAGCACTGACATGAGCTGTGATTTTCCACAAATCCACATT
TTTTGTTCAGAACTGCCACGTGAATACACGATGTATTGTATTGGCTTGTTTGTGATACTT
GCACAATCAAGTAATCAACCATTGTCTGATCAGTAAGATGACAAAGTCTTCTCCAGATTT
TTACGGTAGCAATCCTGTTAATA
clustalw multiple alignements is not computed in this case