cluster # 6640

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Oryza sativa
cluster # 6640 cluster # 6640 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6640#0 length = 1709 sequences # 4
consensusID : consensus_6640#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1709
fasta sequence
                              [AACTTGCCAAGTTCATCCATCCTCCCCTTCCCCCCTCCGATCCCCTCCCATCCCCTCCCCGCCGCCTCGTGCGATCGATCGATCGATCGATCCGCACCACCCACGCGCCCGATTCGCCCTCCTACCCAGGCCACCTCTAACCCTAGCGCCGGCGGCTCTTCTCCCCCGCCGCCACCGCCGCTCCAACCCTCCCCAACAGTGGGTTTCTCTCCCCCCCAATCCCCTCCCCTCTACCGCCGTCGATCGACGCGCCACCAGGAGGGGAGCAGGACGAAAGCCGGTGCTGCCTACCGCCTCCGCAGGTACCTCATCGAGCATCGGTCGGAGTGCAACCGGAGTGCCAAGGTGTATTTCATGGATTCTTTTCAACATGGCATGGATGCTGATAAACACCACATTTTTGGGGAGCGTGGCAATATGATTCAGTTAAATATGTGTGCATCTGATGGTCGTTCTGTTGTTGGACAACGATGCCAGAGACTTGGGTGTAACAATGTTGTTGAAGGCCAGACATTGCTCTGTAAAAGTCACAGTATAGGGCAACGATGCCAAATGCTTGGCTGCCCTCATATTGTACCAGATGGCTCAGTATTATGTATGTCCCATGGTGGAGGTCGCCCGCTTGGTGAACCTGGTTCCAGTACAGTAGCTTGCTCCAAATCAGAAATTTCAATCAAGTACGAAGGAGAGAGTGGGTTCAGAGTAACCCAAAATGCTGGGAATGATCTGGGTAGTGCAGGAATCTATAATCCTGATGGTGATGTTGTGATGTGCAAGTACCAGGGTTGCAGCAAGCGAGCCCAGGGAAATGCAATGTACTGTAAGATTCACCGCGGCGGTTCAAAGGGCTGCATGGTTCAAGGTTGTACAAAGGGTGCACATGGGGGCACACCTTTATGCATTGCTCATGGCGGAGGCAAGCGCTGCGCTGTCACTGGATGCCCCAATGCAGCATGTGGCAGCAGTCAAGGCCTCACTGACCGCTGTGTAAGGCATGGTGGTGGAAGGAGGTGCAGGTTTGATGGTTGTGTGAAGGGTGCCCAAGGGAACACAGACTTTTGCATTGGACATGGTGGGGGAAGACGCTGCAAGTTTGAAGGATGTGGTAAGAGTGCACAAGGGCGGAGTGATTACTGCATCAAACATGGTGGCGGCAGGCGCTGCAAGTTTCAAGGATGTGCCACGAGTGCAAAATGGGGCATGGATTTCTGCTCTTTGCACAGAAAGAGCTTGATGAGCGGCAGCAATTCTTCCCATGAAATGCTGCCAGCGCCACCGCCCAAGCGCCGGGCCAAGAAGACCAAGACCGCGGTTGGTCCATCTGGTCTCTCCAGTGACCCCAAATCAGCAGAGAGTGTGATGATTAAGCATGCTTCCAATGCGGGTCACCAACAACAGCCGATCCACTCTATGAAATCCTCGCCGTCTTCTGGGTTAACTGCTTCAACTGAGGGTGATGTGGCGGCGAGGAGCCATGCATTATTTGGACTGTAGATACCTTGTTGATGCATAAGAGTGGTTTCGCATAGACTTGTTAACTAGGGGGATTAGCTGTGAACTGAAGTGAAGATAAGGATCATAGGAGATCCACTTTTTATATTAACATGCTTTCACTGTCAGTTGACTTGAGTAGAACTGTGCATTGTGTTATCTGCAAGGATTATCAACAAATTTAAATCTGCATAGTACCTATGTATGTGGTTCAAAAA]

[+] EMBL AK103847             [AACTTGCCAAGTTCATCCATCCTCCCCTTCCCCCCTCCGATCCCCTCCCATCCCCTCCCCGCCGCCTCGTGCGATCGATCGATCGATCGATCCGCACCACCCACGCGCCCGATTCGCCCTCCTACCCAGGCCACCTCTAACCCTAGCGCCGGCGGCTCTTCTCCCCCGCCGCCACCGCCGCTCCAACCCTCCCCAACAGTGGGTTTCTCTCCCCCCCAATCCCCTCCCCTCTACCGCCGTCGATCGACGCGCCACCAGGAGGGGAGCAGGACGAAAGCCGGTGCTGCCTACCGCCTCCGCAGGTACCTCATCGAGCATCGGTCGGAGTGCAACCGGAGTGCCAAGGTGTATTTCATGGATTCTTTTCAACATGGCATGGATGCTGATAAACACCACATTTTTGGGGAGCGTGGCAATATGATTCAGTTAAATATGTGTGCATCTGATGGTCGTTCTGTTGTTGGACAACGATGCCAGAGACTTGGGTGTAACAATGTTGTTGAAGGCCAGACATTGCTCTGTAAAAGTCACAGTATAGGGCAACGATGCCAAATGCTTGGCTGCCCTCATATTGTACCAGATGGCTCAGTATTATGTATGTCCCATGGTGGAGGTCGCCCGCTTGGTGAACCTGGTTCCAGTACAGTAGCTTGCTCCAAATCAGAAATTTCAATCAAGTACGAAGGAGAGAGTGGGTTCAGAGTAACCCAAAATGCTGGGAATGATCTGGGTAGTGCAGGAATCTATAATCCTGATGGTGATGTTGTGATGTGCAAGTACCAGGGTTGCAGCAAGCGAGCCCAGGGAAATGCAATGTACTGTAAGATTCACCGCGGCGGTTCAAAGGGCTGCATGGTTCAAGGTTGTACAAAGGGTGCACATGGGGGCACACCTTTATGCATTGCTCATGGCGGAGGCAAGCGCTGCGCTGTCACTGGATGCCCCAATGCAGCATGTGGCAGCAGTCAAGGCCTCACTGACCGCTGTGTAAGGCATGGTGGTGGAAGGAGGTGCAGGTTTGATGGTTGTGTGAAGGGTGCCCAAGGGAACACAGACTTTTGCATTGGACATGGTGGGGGAAGACGCTGCAAGTTTGAAGGATGTGGTAAGAGTGCACAAGGGCGGAGTGATTACTGCATCAAACATGGTGGCGGCAGGCGCTGCAAGTTTCAAGGATGTGCCACGAGTGCAAAATGGGGCATGGATTTCTGCTCTTTGCACAGAAAGAGCTTGATGAGCGGCAGCAATTCTTCCCATGAAATGCTGCCAGCGCCACCGCCCAAGCGCCGGGCCAAGAAGACCAAGACCGCGGTTGGTCCATCTGGTCTCTCCAGTGACCCCAAATCAGCAGAGAGTGTGATGATTAAGCATGCTTCCAATGCGGGTCACCAACAACAGCCGATCCACTCTATGAAATCCTCGCCGTCTTCTGGGTTAACTGCTTCAACTGAGGGTGATGTGGCGGCGAGGAGCCATGCATTATTTGGACTGTAGATACCTTGTTGATGCATAAGAGTGGTTTCGCATAGACTTGTTAACTAGGGGGATTAGCTGTGAACTGAAGTGAAGATAAGGATCATAGGAGATCCACTTTTTATATTAACATGCTTTCACTGTCAGTTGACTTGAGTAGAACTGTGCATTGTGTTATCTGCAAGGATTATCAACAAATTTAAATCTGCATAGTACCTATGTATGT          ]
[+] EMBL AK059378             [                                                                   CGTGCGATCGATCGATCGATCGATCCGCACCACCCACGCGCCCGATTCGCCCTCCTACCCAGGCCACCTCTAACCCTAGCGCCGGCGGCTCTTCTCCCCCGCCGCCACCGCCGCTCCAACCCTCCCCAACAGTGGGTTTCTCTCCCCCCCAATCCCCTCCCCTCTACCGCCGTCGATCGACGCGCCACCAGGAGGGGAGCAGGACGAAAGCCGGTGCTGCCTACCGCCTCCGCAGGTACCTCATCGAGCATCGGTCGGAGTGCAACCGGAGTGCCAAGGTGTATTTCATGGATTCTTTTCAACATGGCATGGATGCTGATAAACACCACATTTTTGGGGAGCGTGGCAATATGATTCAGTTAAATATGTGTGCATCTGATGGTCGTTCTGTTGTTGGACAACGATGCCAGAGACTTGGGTGTAACAATGTTGTTGAAGGCCAGACATTGCTCTGTAAAAGTCACAGTATAGGGCAACGATGCCAAATGCTTGGCTGCCCTCATATTGTACCAGATGGCTCAGTATTATGTATGTCCCATGGTGGAGGTCGCCCGCTTGGTGAACCTGGTTCCAGTACAGTAGCTTGCTCCAAATCAGAAATTTCAATCAAGTACGAAGGAGAGAGTGGGTTCAGAGTAACCCAAAATGCTGGGAATGATCTGGGTAGTGCAGGAATCTATAATCCTGATGGTGATGTTGTGATGTGCAAGTACCAGGGTTGCAGCAAGCGAGCCCAGGGAAATGCAATGTACTGTAAGATTCACCGCGGCGGTTCAAAGGGCTGCATGGTTCAAGGTTGTACAAAGGGTGCACATGGGGGCACACCTTTATGCATTGCTCATGGCGGAGGCAAGCGCTGCGCTGTCACTGGATGCCCCAATGCAGCATGTGGCAGCAGTCAAGGCCTCACTGACCGCTGTGTAAGGCATGGTGGTGGAAGGAGGTGCAGGTTTGATGGTTGTGTGAAGGGTGCCCAAGGGAACACAGACTTTTGCATTGGACATGGTGGGGGAAGACGCTGCAAGTTTGAAGGATGTGGTAAGAGTGCACAAGGGCGGAGTGATTACTGCATCAAACATGGTGGCGGCAGGCGCTGCAAGTTTCAAGGATGTGCCACGAGTGCAAAATGGGGCATGGATTTCTGCTCTTTGCACAGAAAGAGCTTGATGAGCGGCAGCAATTCTTCCCATGAAATGCTGCCAGCGCCACCGCCCAAGCGCCGGGCCAAGAAGACCAAGACCGCGGTTGGTCCATCTGGTCTCTCCAGTGACCCCAAATCAGCAGAGAGTGTGATGATTAAGCATGCTTCCAATGCGGGTCACCAACAACAGCCGATCCACTCTATGAAATCCTCGCCGTCTTCTGGGTTAACTGCTTCAACTGAGGGTGATGTGGCGGCGAGGAGCCATGCATTATTTGGACTGTAGATACCTTGTTGATGCATAAGAGTGGTTTCGCATAGACTTGTTAACTAGGGGGATTAGCTGTGAACTGAAGTGAAGATAAGGATCATAGGAGATCCACTTTTTATATTAACATGCTTTCACTGTCAGTTGACTTGAGTAGAACTGTGCATTGTGTTATCTGCAAGGATTATCAACAAATTTAAA                                ]
[+] EMBL AU182254             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGAGTGTGATGATTAAGCATGCTTCCAATGCGGGTCNCCAACAACAGCCGATCCACTNTATGAAATCCTCGCCGTTTTTTGGGTTAACTGCTTCAACTGAGGGTGATGTGGCGGCGAGGAGCCATGCATTATTTGGACTGTAGATACCTTGTTGATGCATAAGAGTGGTTTNGCATAGACTTGTTAACTAGGGGGATTAGCTGTGAACTGAAGTGAAGATAAGGATCATAGGAGATCCNCTTTTTATATTAACATGCTTTCNCTGTCAGTTGACTTGAGTAGAACTGTGCATTGTGTTATCTGCAAGGATTATCAACAAATTTAAATCTGCATAGTACCTATGTATGTGGTTCAAAAA]
[+] EMBL AA750427             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGATCCACTCTATGAAATNCTCNNCGTCTTCTGGGTTAACTGCTTCAACTGAGGGTGATGTGGCNGCGAGGAG CATGCATTATTTGGACTGTAGATACCTTGTTGATGCATAAGAGTGGTTNCNCATAGACTTGTTAACTAGNGAGATTAGCTGTGAACTGA                                                                                                                                                   ]




>consensus_6640#0
AACTTGCCAAGTTCATCCATCCTCCCCTTCCCCCCTCCGATCCCCTCCCATCCCCTCCCC
GCCGCCTCGTGCGATCGATCGATCGATCGATCCGCACCACCCACGCGCCCGATTCGCCCT
CCTACCCAGGCCACCTCTAACCCTAGCGCCGGCGGCTCTTCTCCCCCGCCGCCACCGCCG
CTCCAACCCTCCCCAACAGTGGGTTTCTCTCCCCCCCAATCCCCTCCCCTCTACCGCCGT
CGATCGACGCGCCACCAGGAGGGGAGCAGGACGAAAGCCGGTGCTGCCTACCGCCTCCGC
AGGTACCTCATCGAGCATCGGTCGGAGTGCAACCGGAGTGCCAAGGTGTATTTCATGGAT
TCTTTTCAACATGGCATGGATGCTGATAAACACCACATTTTTGGGGAGCGTGGCAATATG
ATTCAGTTAAATATGTGTGCATCTGATGGTCGTTCTGTTGTTGGACAACGATGCCAGAGA
CTTGGGTGTAACAATGTTGTTGAAGGCCAGACATTGCTCTGTAAAAGTCACAGTATAGGG
CAACGATGCCAAATGCTTGGCTGCCCTCATATTGTACCAGATGGCTCAGTATTATGTATG
TCCCATGGTGGAGGTCGCCCGCTTGGTGAACCTGGTTCCAGTACAGTAGCTTGCTCCAAA
TCAGAAATTTCAATCAAGTACGAAGGAGAGAGTGGGTTCAGAGTAACCCAAAATGCTGGG
AATGATCTGGGTAGTGCAGGAATCTATAATCCTGATGGTGATGTTGTGATGTGCAAGTAC
CAGGGTTGCAGCAAGCGAGCCCAGGGAAATGCAATGTACTGTAAGATTCACCGCGGCGGT
TCAAAGGGCTGCATGGTTCAAGGTTGTACAAAGGGTGCACATGGGGGCACACCTTTATGC
ATTGCTCATGGCGGAGGCAAGCGCTGCGCTGTCACTGGATGCCCCAATGCAGCATGTGGC
AGCAGTCAAGGCCTCACTGACCGCTGTGTAAGGCATGGTGGTGGAAGGAGGTGCAGGTTT
GATGGTTGTGTGAAGGGTGCCCAAGGGAACACAGACTTTTGCATTGGACATGGTGGGGGA
AGACGCTGCAAGTTTGAAGGATGTGGTAAGAGTGCACAAGGGCGGAGTGATTACTGCATC
AAACATGGTGGCGGCAGGCGCTGCAAGTTTCAAGGATGTGCCACGAGTGCAAAATGGGGC
ATGGATTTCTGCTCTTTGCACAGAAAGAGCTTGATGAGCGGCAGCAATTCTTCCCATGAA
ATGCTGCCAGCGCCACCGCCCAAGCGCCGGGCCAAGAAGACCAAGACCGCGGTTGGTCCA
TCTGGTCTCTCCAGTGACCCCAAATCAGCAGAGAGTGTGATGATTAAGCATGCTTCCAAT
GCGGGTCACCAACAACAGCCGATCCACTCTATGAAATCCTCGCCGTCTTCTGGGTTAACT
GCTTCAACTGAGGGTGATGTGGCGGCGAGGAGCCATGCATTATTTGGACTGTAGATACCT
TGTTGATGCATAAGAGTGGTTTCGCATAGACTTGTTAACTAGGGGGATTAGCTGTGAACT
GAAGTGAAGATAAGGATCATAGGAGATCCACTTTTTATATTAACATGCTTTCACTGTCAG
TTGACTTGAGTAGAACTGTGCATTGTGTTATCTGCAAGGATTATCAACAAATTTAAATCT
GCATAGTACCTATGTATGTGGTTCAAAAA
clustalw multiple alignements is not computed in this case