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Oryza sativa
cluster # 6642 cluster # 6642       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6642#0 length = 2890 sequences # 2  
consensus_6642#1 length = 1669 sequences # 2  

consensusID : consensus_6642#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2890
fasta sequence
                              [GAAGACGAAACTGCCCCGTGCGCCGCCAACATCTCCCCTCTCCGGCTACCGCCGCCACCGCGCCGCCGCGCTCCTCGCTCCTCGCTCCAGGGCTTCCGGCCATGGCCGGCGGCGACGGCGATCGTGCCCGCGCGCCGAAGCGGCACAAGTCCTCGGCGCCGTCGAGGTCGACTGACGAGACCGCCGAACTGGACTACACCGATGACGTCGATGACGACGTCCGCGATGCCGATAGGGAGGTGAAGAAGAGGGACTTCACCAAGCTAGAGCTGAAGCCGGATCACGCGAACAGGCCGCTCTGGGCCTGCGCCGATGGCCGCATCTTCCTGGAGACGTTTTCGCCCCTATACAAACAAGCCTACGATTTCTTGATCGCTATTGCGGAGCCTGTTTGCAGGCCAGAATCCATGCACGAGTACAATCTAACACCCCACTCACTATATGCTGCGGTCTCAGTTGGGCTTGAGACTAGCACTATAATCAGTGTCATGAGCAAGCTCTCCAAGACTAAACTGCCTCGTGAAATAATTGATTTTATCCATGCTCAACTGCCAATTATGGTAAAGTGAAGCTTGTTCTGAAGAAGAATCGATATTTTGTGGAGTCTCCATTCCCTGAGGTTTTGAAGACGCTTCTGAAAGATGATATCATTTGCAGAGCACGGATATCTCCTGAGGATTCCGTTGGGGCACCTTCATTTACTATTAGCAAAACAGCTGGTGAAATGGCTAGTGGCCATGAGGACTTATTAGATGGAATGGAACTGGCTGCTGCAACTGAAGACAAGGAAACACATTCTTTTGAAATTGATCCTTCTCAGGTTGAGAATGTGAAGCAGCGTTGCTTGCCAAATGCACTGAACTTCCCCATGCTGGAGGAGTACGATTTTAGAAACGACACAGTGAATCCAGATTTGGAGATGGAATTAAAGCCCCAGGCACGCCCAAGGCCATATCAAGAAAAGAGCCTCAGCAAGATGTTTGGGAATGGCAGAGCAAGGTCAGGCATTATTGTGTTACCTTGTGGTGCTGGCAAGTCCTTGGTTGGTGTATCTGCTGCATGTCGTATCAAGAAGAGTTGTCTATGTTTGGCCACAAATGCTGTATCAGTTGATCAATGGGCATTTCAGTTCAAGCTTTGGTCAACTATAAAAGATGAACATATCAGCCGTTTTACATCAGATAACAAGGAGAAATTCCGTGGAATGGCCGGTGTAGTTGTGACTACATATAACATGGTTGCATTTGGAGGTAAACGGTCTGAAGACTCTGAGAAGATAATTGAAGAAATTCGAAATAGGGAGTGGGGCTTGCTCCTAATGGATGAGGTCCATGTTGTTCCTGCACATATGTTCAGAAAGGTCATCAGCATTACAAAATCTCACTGCAAGCTTGGTCTTACTGCTACACTTGTGAGAGAGGATGAACGCATCACTGATTTAAATTTTCTTATTGGACCAAAGCTGTATGAAGCAAACTGGTTGGATTTAGTGAAAGGTGGATTTATTGCAAATGTGCAGTGTGCCGAAGTTTGGTGTCCCATGACCAAAGAGTTCTTTGCTGAGTATTTGAAAAAAGAAAATTCAAAGAAGAAGCAGGTCCTCTATGCGATGAACCCAAACAAATTCAGAGCTTGCGAGTTTCTAATTCGATTCCATGAGCAACAACGTGGGGACAAGATAATTGTGTTTGCCGATAATCTATTTGCACTAACTAGCTACGCAATGAAGCTCCGTAAACCAATGATTTATGGTTCCACAAGCCATGTTGAGAGGACGAGAATTCTGCATCAATTCAAGAACAGCTCAGATGTGAATACAATTTTCCTTTCAAAGGTGCAGTAACTGATATTCTGATTCAAAACATACTTTTGTAAATTCAACCATCATCATCTTAACTGCATATCTACTGTCACTTAGGTGGGTGATAACTCGATTGATATTCCAGAAGCAAATGTGATCATACAAATTTCATCTCATGCTGGTTCACGGCGTCAAGAAGCTCAACGGTTGGGACGTATTCTCAGGGCAAAGGGTAAGCATCAAGACAGGATGGCTGGTGGAAAAGAAGAATACAATGCGTTCTTCTACTCTCTTGTATCGACTGACACTCAGGAGATGTACTACTCAACTAAAAGGCAACAATTTCTTATTGACCAGGGATATAGCTTCAAGGTGATCACCAGCTTGCCGCCACCTGAAGAATTACCTAACCTGAAATATTACACACTTAATGATCAGCTTGAACTTTTGGCACAAGTAGGTGTTTTCTGTACCTGTTGTTTGTAAGCTGCTACTTCTTTATTTCTAATTGTGCGAGCTTGCTTGTAAACTCACTTCGCCACTTAAACCAGTTGCTGAGTGCAAGGGATGACATGATTGGCATTGAGCACTTGGAAGAGGATTCTGATGGCAAGGCTCTTATGAAAGCACGGCGATCTGCTGGATCAATGAGTGCCTTTTCTGGATCGGGGGGAATGGTCTACATGGAGTACAGCACTGGTAAGGGGAAGGCTGGAGCTTCCAAGAAACCGAAGGACCCTTCAAAGAGGCATTACCTGTTTAAGAAGCGTTATCAATGATCTTGATAACCGGCGTTGTTTCCTTCCTTTGCCTATCTCATCTGCAAAAATACTGAATACGAGTTATGGTTAAGGAATTCCAATGATTAACGTGGAGTGGGGGAGGTTCCCATTAGCGCATCGACCAGCATTTTTGTTAACTTGCCGAGATATTTGCATCAACATCCAACGGCAATAAGCACTTATTTGGTCGCACGCCCTTGTGTTTGCTAATGAGAAAAAACTTGGCATTTGCCTTGGTCCTGAAGATGTAAATACTGTTGATGCAAATACTTCTGTAAGGCTTATATGACATCTAGTTATTTTCCGG]

[+] EMBL AK103297             [GAAGACGAAACTGCCCCGTGCGCCGCCAACATCTCCCCTCTCCGGCTACCGCCGCCACCGCGCCGCCGCGCTCCTCGCTCCTCGCTCCAGGGCTTCCGGCCATGGCCGGCGGCGACGGCGATCGTGCCCGCGCGCCGAAGCGGCACAAGTCCTCGGCGCCGTCGAGGTCGACTGACGAGACCGCCGAACTGGACTACACCGATGACGTCGATGACGACGTCCGCGATGCCGATAGGGAGGTGAAGAAGAGGGACTTCACCAAGCTAGAGCTGAAGCCGGATCACGCGAACAGGCCGCTCTGGGCCTGCGCCGATGGCCGCATCTTCCTGGAGACGTTTTCGCCCCTATACAAACAAGCCTACGATTTCTTGATCGCTATTGCGGAGCCTGTTTGCAGGCCAGAATCCATGCACGAGTACAATCTAACACCCCACTCACTATATGCTGCGGTCTCAGTTGGGCTTGAGACTAGCACTATAATCAGTGTCATGAGCAAGCTCTCCAAGACTAAACTGCCTCGTGAAATAATTGATTTTATCCATGCTCAACTGCCAATTATGGTAAAGTGAAGCTTGTTCTGAAGAAGAATCGATATTTTGTGGAGTCTCCATTCCCTGAGGTTTTGAAGACGCTTCTGAAAGATGATATCATTTGCAGAGCACGGATATCTCCTGAGGATTCCGTTGGGGCACCTTCATTTACTATTAGCAAAACAGCTGGTGAAATGGCTAGTGGCCATGAGGACTTATTAGATGGAATGGAACTGGCTGCTGCAACTGAAGACAAGGAAACACATTCTTTTGAAATTGATCCTTCTCAGGTTGAGAATGTGAAGCAGCGTTGCTTGCCAAATGCACTGAACTTCCCCATGCTGGAGGAGTACGATTTTAGAAACGACACAGTGAATCCAGATTTGGAGATGGAATTAAAGCCCCAGGCACGCCCAAGGCCATATCAAGAAAAGAGCCTCAGCAAGATGTTTGGGAATGGCAGAGCAAGGTCAGGCATTATTGTGTTACCTTGTGGTGCTGGCAAGTCCTTGGTTGGTGTATCTGCTGCATGTCGTATCAAGAAGAGTTGTCTATGTTTGGCCACAAATGCTGTATCAGTTGATCAATGGGCATTTCAGTTCAAGCTTTGGTCAACTATAAAAGATGAACATATCAGCCGTTTTACATCAGATAACAAGGAGAAATTCCGTGGAATGGCCGGTGTAGTTGTGACTACATATAACATGGTTGCATTTGGAGGTAAACGGTCTGAAGACTCTGAGAAGATAATTGAAGAAATTCGAAATAGGGAGTGGGGCTTGCTCCTAATGGATGAGGTCCATGTTGTTCCTGCACATATGTTCAGAAAGGTCATCAGCATTACAAAATCTCACTGCAAGCTTGGTCTTACTGCTACACTTGTGAGAGAGGATGAACGCATCACTGATTTAAATTTTCTTATTGGACCAAAGCTGTATGAAGCAAACTGGTTGGATTTAGTGAAAGGTGGATTTATTGCAAATGTGCAGTGTGCCGAAGTTTGGTGTCCCATGACCAAAGAGTTCTTTGCTGAGTATTTGAAAAAAGAAAATTCAAAGAAGAAGCAGGTCCTCTATGCGATGAACCCAAACAAATTCAGAGCTTGCGAGTTTCTAATTCGATTCCATGAGCAACAACGTGGGGACAAGATAATTGTGTTTGCCGATAATCTATTTGCACTAACTAGCTACGCAATGAAGCTCCGTAAACCAATGATTTATGGTTCCACAAGCCATGTTGAGAGGACGAGAATTCTGCATCAATTCAAGAACAGCTCAGATGTGAATACAATTTTCCTTTCAAAGGTGCAGTAACTGATATTCTGATTCAAAACATACTTTTGTAAATTCAACCATCATCATCTTAACTGCATATCTACTGTCACTTAGGTGGGTGATAACTCGATTGATATTCCAGAAGCAAATGTGATCATACAAATTTCATCTCATGCTGGTTCACGGCGTCAAGAAGCTCAACGGTTGGGACGTATTCTCAGGGCAAAGGGTAAGCATCAAGACAGGATGGCTGGTGGAAAAGAAGAATACAATGCGTTCTTCTACTCTCTTGTATCGACTGACACTCAGGAGATGTACTACTCAACTAAAAGGCAACAATTTCTTATTGACCAGGGATATAGCTTCAAGGTGATCACCAGCTTGCCGCCACCTGAAGAATTACCTAACCTGAAATATTACACACTTAATGATCAGCTTGAACTTTTGGCACAAGTAGGTGTTTTCTGTACCTGTTGTTTGTAAGCTGCTACTTCTTTATTTCTAATTGTGCGAGCTTGCTTGTAAACTCACTTCGCCACTTAAACCAGTTGCTGAGTGCAAGGGATGACATGATTGGCATTGAGCACTTGGAAGAGGATTCTGATGGCAAGGCTCTTATGAAAGCACGGCGATCTGCTGGATCAATGAGTGCCTTTTCTGGATCGGGGGGAATGGTCTACATGGAGTACAGCACTGGTAAGGGGAAGGCTGGAGCTTCCAAGAAACCGAAGGACCCTTCAAAGAGGCATTACCTGTTTAAGAAGCGTTATCAATGATCTTGATAACCGGCGTTGTTTCCTTCCTTTGCCTATCTCATCTGCAAAAATACTGAATACGAGTTATGGTTAAGGAATTCCAATGATTAACGTGGAGTGGGGGAGGTTCCCATTAGCGCATCGACCAGCATTTTTGTTAACTTGCCGAGATATTTGCATCAACATCCAACGGCAATAAGCACTTATTTGGTCGCACGCCCTTGTGTTTGCTAATGAGAAAAAACTTGGCATTTGCCTTGGTCCTGAAGATGTAAATACTGTTGATGCAAATACTTCTGTAAGGCTTATATGACATCTAGTTATTTTCCGG]
[+] EMBL CB640940             [           TGCCCCGTGCGCCGCCAACATCTCCCCTCTCCGGCTACCGCCGCCACCGCGCCGCCGCGCTCCTCGCTCCTCGCTCCAGGGCTTCCGGCCATGGCCGGCGGCGACGGCGATCGCGCCCGCGCGCCGAAGCGGCACAAGTCCTCGGCGCCGTCGAGGTCGATTGACGAGACCGCCGAACTGGACTACACCGATGACGTCGATGACGACGTCCGCGATGCCGATAGGGAGGCGAACAACAGGGACTTCACCAAGCTAGAGCTGAAGCCGGATCACGCGAACAGGCCGCTCTGGGCCTGCGCCGATGGCCGCATCTTCCTGGAGACGTTTTCGCCCCTATACAAACAAGCCTACGATTTCTTGATCGCTATTGCGGAGCCTGTTTGCAGGCCACAATCCATGCACGAGTCCAATCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_6642#0 GAAGACGAAACTGCCCCGTGCGCCGCCAACATCTCCCCTCTCCGGCTACCGCCGCCACCG CGCCGCCGCGCTCCTCGCTCCTCGCTCCAGGGCTTCCGGCCATGGCCGGCGGCGACGGCG ATCGTGCCCGCGCGCCGAAGCGGCACAAGTCCTCGGCGCCGTCGAGGTCGACTGACGAGA CCGCCGAACTGGACTACACCGATGACGTCGATGACGACGTCCGCGATGCCGATAGGGAGG TGAAGAAGAGGGACTTCACCAAGCTAGAGCTGAAGCCGGATCACGCGAACAGGCCGCTCT GGGCCTGCGCCGATGGCCGCATCTTCCTGGAGACGTTTTCGCCCCTATACAAACAAGCCT ACGATTTCTTGATCGCTATTGCGGAGCCTGTTTGCAGGCCAGAATCCATGCACGAGTACA ATCTAACACCCCACTCACTATATGCTGCGGTCTCAGTTGGGCTTGAGACTAGCACTATAA TCAGTGTCATGAGCAAGCTCTCCAAGACTAAACTGCCTCGTGAAATAATTGATTTTATCC ATGCTCAACTGCCAATTATGGTAAAGTGAAGCTTGTTCTGAAGAAGAATCGATATTTTGT GGAGTCTCCATTCCCTGAGGTTTTGAAGACGCTTCTGAAAGATGATATCATTTGCAGAGC ACGGATATCTCCTGAGGATTCCGTTGGGGCACCTTCATTTACTATTAGCAAAACAGCTGG TGAAATGGCTAGTGGCCATGAGGACTTATTAGATGGAATGGAACTGGCTGCTGCAACTGA AGACAAGGAAACACATTCTTTTGAAATTGATCCTTCTCAGGTTGAGAATGTGAAGCAGCG TTGCTTGCCAAATGCACTGAACTTCCCCATGCTGGAGGAGTACGATTTTAGAAACGACAC AGTGAATCCAGATTTGGAGATGGAATTAAAGCCCCAGGCACGCCCAAGGCCATATCAAGA AAAGAGCCTCAGCAAGATGTTTGGGAATGGCAGAGCAAGGTCAGGCATTATTGTGTTACC TTGTGGTGCTGGCAAGTCCTTGGTTGGTGTATCTGCTGCATGTCGTATCAAGAAGAGTTG TCTATGTTTGGCCACAAATGCTGTATCAGTTGATCAATGGGCATTTCAGTTCAAGCTTTG GTCAACTATAAAAGATGAACATATCAGCCGTTTTACATCAGATAACAAGGAGAAATTCCG TGGAATGGCCGGTGTAGTTGTGACTACATATAACATGGTTGCATTTGGAGGTAAACGGTC TGAAGACTCTGAGAAGATAATTGAAGAAATTCGAAATAGGGAGTGGGGCTTGCTCCTAAT GGATGAGGTCCATGTTGTTCCTGCACATATGTTCAGAAAGGTCATCAGCATTACAAAATC TCACTGCAAGCTTGGTCTTACTGCTACACTTGTGAGAGAGGATGAACGCATCACTGATTT AAATTTTCTTATTGGACCAAAGCTGTATGAAGCAAACTGGTTGGATTTAGTGAAAGGTGG ATTTATTGCAAATGTGCAGTGTGCCGAAGTTTGGTGTCCCATGACCAAAGAGTTCTTTGC TGAGTATTTGAAAAAAGAAAATTCAAAGAAGAAGCAGGTCCTCTATGCGATGAACCCAAA CAAATTCAGAGCTTGCGAGTTTCTAATTCGATTCCATGAGCAACAACGTGGGGACAAGAT AATTGTGTTTGCCGATAATCTATTTGCACTAACTAGCTACGCAATGAAGCTCCGTAAACC AATGATTTATGGTTCCACAAGCCATGTTGAGAGGACGAGAATTCTGCATCAATTCAAGAA CAGCTCAGATGTGAATACAATTTTCCTTTCAAAGGTGCAGTAACTGATATTCTGATTCAA AACATACTTTTGTAAATTCAACCATCATCATCTTAACTGCATATCTACTGTCACTTAGGT GGGTGATAACTCGATTGATATTCCAGAAGCAAATGTGATCATACAAATTTCATCTCATGC TGGTTCACGGCGTCAAGAAGCTCAACGGTTGGGACGTATTCTCAGGGCAAAGGGTAAGCA TCAAGACAGGATGGCTGGTGGAAAAGAAGAATACAATGCGTTCTTCTACTCTCTTGTATC GACTGACACTCAGGAGATGTACTACTCAACTAAAAGGCAACAATTTCTTATTGACCAGGG ATATAGCTTCAAGGTGATCACCAGCTTGCCGCCACCTGAAGAATTACCTAACCTGAAATA TTACACACTTAATGATCAGCTTGAACTTTTGGCACAAGTAGGTGTTTTCTGTACCTGTTG TTTGTAAGCTGCTACTTCTTTATTTCTAATTGTGCGAGCTTGCTTGTAAACTCACTTCGC CACTTAAACCAGTTGCTGAGTGCAAGGGATGACATGATTGGCATTGAGCACTTGGAAGAG GATTCTGATGGCAAGGCTCTTATGAAAGCACGGCGATCTGCTGGATCAATGAGTGCCTTT TCTGGATCGGGGGGAATGGTCTACATGGAGTACAGCACTGGTAAGGGGAAGGCTGGAGCT TCCAAGAAACCGAAGGACCCTTCAAAGAGGCATTACCTGTTTAAGAAGCGTTATCAATGA TCTTGATAACCGGCGTTGTTTCCTTCCTTTGCCTATCTCATCTGCAAAAATACTGAATAC GAGTTATGGTTAAGGAATTCCAATGATTAACGTGGAGTGGGGGAGGTTCCCATTAGCGCA TCGACCAGCATTTTTGTTAACTTGCCGAGATATTTGCATCAACATCCAACGGCAATAAGC ACTTATTTGGTCGCACGCCCTTGTGTTTGCTAATGAGAAAAAACTTGGCATTTGCCTTGG TCCTGAAGATGTAAATACTGTTGATGCAAATACTTCTGTAAGGCTTATATGACATCTAGT TATTTTCCGG



consensusID : consensus_6642#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1669
fasta sequence
                              [TGCTTGCCAAATGCACTGAACTTCCCCATGCTGGAGGAGTACGATTTTAGAAACGACACAGTGAATCCAGATTTGGAGATGGAATTAAAGCCCCAGGCACGCCCAAGGCCATATCAAGAAAAGAGCCTCAGCAAGATGTTTGGGAATGGCAGAGCAAGGTCAGGCATTATTGTGTTACCTTGTGGTGCTGGCAAGTCCTTGGTTGGTGTATCTGCTGCATGTCGTATCAAGAAGAGTTGTCTATGTTTGGCCACAAATGCTGTATCAGTTGATCAATGGGCATTTCAGTTCAAGCTTTGGTCAACTATAAAAGATGAACATATCAGCCGTTTTACATCAGATAACAAGGAGAAATTCCGTGGAATGGCCGGTGTAGTTGTGACTACATATAACATGGTTGCATTTGGAGGTAAACGGTCTGAAGACTCTGAGGAGATAATTGAAGAAATTCGAAATAGGGAGTGGGGCTTGCTCCTAATGGATGAGGTCCATGTTGTTCCTGCACATATGTTCAGAAAGGTCATCAGCATTACAAAATCTCACTGCAAGCTTGGTCTTACTGCTACACTTGTGAGAGAGGATGAACGCATCACTGATTTAAATTTTCTTATTGGACCAAAGCTGTATGAAGCAAACTGGTTGGATTTAGTGAAAGGTGGATTTATTGCAAATGTGCAGTGTGCCGAAGTTTGGTGTCCCATGACCAAAGAGTTCTTTGCTGAGTATTTGAAAAAAGAAAATTCAAAGAAGAAGCAGGTCCTCTATGCGATGAACCCAAACAAATTCAGAGCTTGCGAGTTTCTAATTCGATTCCATGAGCAACAACGTGGGGACAAGATAATTGTGTTTGCCGATAATCTATTTGCACTAACTAGCTACGCAATGAAGCTCCGTAAACCAATGATTTATGGTTCCACAAGCCATGTTGAGAGGACGAGAATTCTGCATCAATTCAAGAACAGCTCAGATGTGAATACAATTTTCCTTTCAAAGGTGGGTGATAACTCGATTGATATTCCAGAAGCAAATGTGATCATACAAATTTCATCTCATGCTGGTTCACGGCGTCAAGAAGCTCAACGGTTGGGACGTATTCTCAGGGCAAAGGGTAAGCATCAAGACAGGATGGCTGGTGGAAAAGAAGAATACAATGCGTTCTTCTACTCTCTTGTATCGACTGACACTCAGGAGATGTACTACTCAACTAAAAGGCAACAATTTCTTATTGACCAGGGATATAGCTTCAAGGTGATCACCAGCTTGCCGCCACCTGAAGAATTACCTAACCTGAAATATTACACACTTAATGATCAGCTTGAACTTTTGGCACAATTGCTGAGTGCAAGGGATGACATGATTGGCATTGAGCACTTGGAAGAGGATTCTGATGGCAAGGCACTTATGAAAGCACGGCGATCTGCTGGATCAATGAGTGCCTTTTCTGGATCGGGGGGAATGGTCTACATGGAGTACAGCACTGGTAAGGGGAAGGCTGGAGCTTCCAAGAAACCGAAGGACCCTTCAAAGAGGCATTACCTGTTTAAGAAGCGTTATCAATGATCTTGATAACCGGCGTTGTTTCCTTCCTTTGCCTATCTCATCTGCAAAAATACTGAATACGAGTTATGGTTAAGGAATTCCAATGATTAACGTGGAGTGGGGGAGGTTC]

[+] EMBL AK060447             [TGCTTGCCAAATGCACTGAACTTCCCCATGCTGGAGGAGTACGATTTTAGAAACGACACAGTGAATCCAGATTTGGAGATGGAATTAAAGCCCCAGGCACGCCCAAGGCCATATCAAGAAAAGAGCCTCAGCAAGATGTTTGGGAATGGCAGAGCAAGGTCAGGCATTATTGTGTTACCTTGTGGTGCTGGCAAGTCCTTGGTTGGTGTATCTGCTGCATGTCGTATCAAGAAGAGTTGTCTATGTTTGGCCACAAATGCTGTATCAGTTGATCAATGGGCATTTCAGTTCAAGCTTTGGTCAACTATAAAAGATGAACATATCAGCCGTTTTACATCAGATAACAAGGAGAAATTCCGTGGAATGGCCGGTGTAGTTGTGACTACATATAACATGGTTGCATTTGGAGGTAAACGGTCTGAAGACTCTGAGGAGATAATTGAAGAAATTCGAAATAGGGAGTGGGGCTTGCTCCTAATGGATGAGGTCCATGTTGTTCCTGCACATATGTTCAGAAAGGTCATCAGCATTACAAAATCTCACTGCAAGCTTGGTCTTACTGCTACACTTGTGAGAGAGGATGAACGCATCACTGATTTAAATTTTCTTATTGGACCAAAGCTGTATGAAGCAAACTGGTTGGATTTAGTGAAAGGTGGATTTATTGCAAATGTGCAGTGTGCCGAAGTTTGGTGTCCCATGACCAAAGAGTTCTTTGCTGAGTATTTGAAAAAAGAAAATTCAAAGAAGAAGCAGGTCCTCTATGCGATGAACCCAAACAAATTCAGAGCTTGCGAGTTTCTAATTCGATTCCATGAGCAACAACGTGGGGACAAGATAATTGTGTTTGCCGATAATCTATTTGCACTAACTAGCTACGCAATGAAGCTCCGTAAACCAATGATTTATGGTTCCACAAGCCATGTTGAGAGGACGAGAATTCTGCATCAATTCAAGAACAGCTCAGATGTGAATACAATTTTCCTTTCAAAGGTGGGTGATAACTCGATTGATATTCCAGAAGCAAATGTGATCATACAAATTTCATCTCATGCTGGTTCACGGCGTCAAGAAGCTCAACGGTTGGGACGTATTCTCAGGGCAAAGGGTAAGCATCAAGACAGGATGGCTGGTGGAAAAGAAGAATACAATGCGTTCTTCTACTCTCTTGTATCGACTGACACTCAGGAGATGTACTACTCAACTAAAAGGCAACAATTTCTTATTGACCAGGGATATAGCTTCAAGGTGATCACCAGCTTGCCGCCACCTGAAGAATTACCTAACCTGAAATATTACACACTTAATGATCAGCTTGAACTTTTGGCACAATTGCTGAGTGCAAGGGATGACATGATTGGCATTGAGCACTTGGAAGAGGATTCTGATGGCAAGGCACTTATGAAAGCACGGCGATCTGCTGGATCAATGAGTGCCTTTTCTGGATCGGGGGGAATGGTCTACATGGAGTACAGCACTGGTAAGGGGAAGGCTGGAGCTTCCAAGAAACCGAAGGACCCTTCAAAGAGGCATTACCTGTTTAAGAAGCGTTATCAATGATCTTGATAACCGGCGTTGTTTCCTTCCTTTGCCTATCTCATCTGCAAAAATACTGAATACGAGTTATGGTTAAGGAATTCCAATGATTAACGTGGAGTGGGGGAGGTTC]
[+] EMBL AA750441             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cATGAGTGCCTTTCCTGGATCGGGGGGAATGGTCTACATGGAGTACAGCACTGGTAAGGGGAAGGCTGGAGCTTCCAAGAAACCGAA GACCCTTCAAAGAGGCATTACCTGTTTAAG AGCGTTATC ATGATCTTGAT ACCGGCGTTGTTTCC TCCTTTGCCTATCTCATCTGC  AAATA TG ATACGAGTTATGGTTAAGG ATTC  ATGATT ACGTGGAGTGGGGGA     ]


>consensus_6642#1 TGCTTGCCAAATGCACTGAACTTCCCCATGCTGGAGGAGTACGATTTTAGAAACGACACA GTGAATCCAGATTTGGAGATGGAATTAAAGCCCCAGGCACGCCCAAGGCCATATCAAGAA AAGAGCCTCAGCAAGATGTTTGGGAATGGCAGAGCAAGGTCAGGCATTATTGTGTTACCT TGTGGTGCTGGCAAGTCCTTGGTTGGTGTATCTGCTGCATGTCGTATCAAGAAGAGTTGT CTATGTTTGGCCACAAATGCTGTATCAGTTGATCAATGGGCATTTCAGTTCAAGCTTTGG TCAACTATAAAAGATGAACATATCAGCCGTTTTACATCAGATAACAAGGAGAAATTCCGT GGAATGGCCGGTGTAGTTGTGACTACATATAACATGGTTGCATTTGGAGGTAAACGGTCT GAAGACTCTGAGGAGATAATTGAAGAAATTCGAAATAGGGAGTGGGGCTTGCTCCTAATG GATGAGGTCCATGTTGTTCCTGCACATATGTTCAGAAAGGTCATCAGCATTACAAAATCT CACTGCAAGCTTGGTCTTACTGCTACACTTGTGAGAGAGGATGAACGCATCACTGATTTA AATTTTCTTATTGGACCAAAGCTGTATGAAGCAAACTGGTTGGATTTAGTGAAAGGTGGA TTTATTGCAAATGTGCAGTGTGCCGAAGTTTGGTGTCCCATGACCAAAGAGTTCTTTGCT GAGTATTTGAAAAAAGAAAATTCAAAGAAGAAGCAGGTCCTCTATGCGATGAACCCAAAC AAATTCAGAGCTTGCGAGTTTCTAATTCGATTCCATGAGCAACAACGTGGGGACAAGATA ATTGTGTTTGCCGATAATCTATTTGCACTAACTAGCTACGCAATGAAGCTCCGTAAACCA ATGATTTATGGTTCCACAAGCCATGTTGAGAGGACGAGAATTCTGCATCAATTCAAGAAC AGCTCAGATGTGAATACAATTTTCCTTTCAAAGGTGGGTGATAACTCGATTGATATTCCA GAAGCAAATGTGATCATACAAATTTCATCTCATGCTGGTTCACGGCGTCAAGAAGCTCAA CGGTTGGGACGTATTCTCAGGGCAAAGGGTAAGCATCAAGACAGGATGGCTGGTGGAAAA GAAGAATACAATGCGTTCTTCTACTCTCTTGTATCGACTGACACTCAGGAGATGTACTAC TCAACTAAAAGGCAACAATTTCTTATTGACCAGGGATATAGCTTCAAGGTGATCACCAGC TTGCCGCCACCTGAAGAATTACCTAACCTGAAATATTACACACTTAATGATCAGCTTGAA CTTTTGGCACAATTGCTGAGTGCAAGGGATGACATGATTGGCATTGAGCACTTGGAAGAG GATTCTGATGGCAAGGCACTTATGAAAGCACGGCGATCTGCTGGATCAATGAGTGCCTTT TCTGGATCGGGGGGAATGGTCTACATGGAGTACAGCACTGGTAAGGGGAAGGCTGGAGCT TCCAAGAAACCGAAGGACCCTTCAAAGAGGCATTACCTGTTTAAGAAGCGTTATCAATGA TCTTGATAACCGGCGTTGTTTCCTTCCTTTGCCTATCTCATCTGCAAAAATACTGAATAC GAGTTATGGTTAAGGAATTCCAATGATTAACGTGGAGTGGGGGAGGTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6642#0      GAAGACGAAACTGCCCCGTGCGCCGCCAACATCTCCCCTCTCCGGCTACCGCCGCCACCG 60
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      CGCCGCCGCGCTCCTCGCTCCTCGCTCCAGGGCTTCCGGCCATGGCCGGCGGCGACGGCG 120
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      ATCGTGCCCGCGCGCCGAAGCGGCACAAGTCCTCGGCGCCGTCGAGGTCGACTGACGAGA 180
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      CCGCCGAACTGGACTACACCGATGACGTCGATGACGACGTCCGCGATGCCGATAGGGAGG 240
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      TGAAGAAGAGGGACTTCACCAAGCTAGAGCTGAAGCCGGATCACGCGAACAGGCCGCTCT 300
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      GGGCCTGCGCCGATGGCCGCATCTTCCTGGAGACGTTTTCGCCCCTATACAAACAAGCCT 360
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      ACGATTTCTTGATCGCTATTGCGGAGCCTGTTTGCAGGCCAGAATCCATGCACGAGTACA 420
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      ATCTAACACCCCACTCACTATATGCTGCGGTCTCAGTTGGGCTTGAGACTAGCACTATAA 480
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      TCAGTGTCATGAGCAAGCTCTCCAAGACTAAACTGCCTCGTGAAATAATTGATTTTATCC 540
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      ATGCTCAACTGCCAATTATGGTAAAGTGAAGCTTGTTCTGAAGAAGAATCGATATTTTGT 600
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      GGAGTCTCCATTCCCTGAGGTTTTGAAGACGCTTCTGAAAGATGATATCATTTGCAGAGC 660
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      ACGGATATCTCCTGAGGATTCCGTTGGGGCACCTTCATTTACTATTAGCAAAACAGCTGG 720
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      TGAAATGGCTAGTGGCCATGAGGACTTATTAGATGGAATGGAACTGGCTGCTGCAACTGA 780
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      AGACAAGGAAACACATTCTTTTGAAATTGATCCTTCTCAGGTTGAGAATGTGAAGCAGCG 840
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      TTGCTTGCCAAATGCACTGAACTTCCCCATGCTGGAGGAGTACGATTTTAGAAACGACAC 900
consensus_6642#1      -TGCTTGCCAAATGCACTGAACTTCCCCATGCTGGAGGAGTACGATTTTAGAAACGACAC 59
                       ***********************************************************

consensus_6642#0      AGTGAATCCAGATTTGGAGATGGAATTAAAGCCCCAGGCACGCCCAAGGCCATATCAAGA 960
consensus_6642#1      AGTGAATCCAGATTTGGAGATGGAATTAAAGCCCCAGGCACGCCCAAGGCCATATCAAGA 119
                      ************************************************************

consensus_6642#0      AAAGAGCCTCAGCAAGATGTTTGGGAATGGCAGAGCAAGGTCAGGCATTATTGTGTTACC 1020
consensus_6642#1      AAAGAGCCTCAGCAAGATGTTTGGGAATGGCAGAGCAAGGTCAGGCATTATTGTGTTACC 179
                      ************************************************************

consensus_6642#0      TTGTGGTGCTGGCAAGTCCTTGGTTGGTGTATCTGCTGCATGTCGTATCAAGAAGAGTTG 1080
consensus_6642#1      TTGTGGTGCTGGCAAGTCCTTGGTTGGTGTATCTGCTGCATGTCGTATCAAGAAGAGTTG 239
                      ************************************************************

consensus_6642#0      TCTATGTTTGGCCACAAATGCTGTATCAGTTGATCAATGGGCATTTCAGTTCAAGCTTTG 1140
consensus_6642#1      TCTATGTTTGGCCACAAATGCTGTATCAGTTGATCAATGGGCATTTCAGTTCAAGCTTTG 299
                      ************************************************************

consensus_6642#0      GTCAACTATAAAAGATGAACATATCAGCCGTTTTACATCAGATAACAAGGAGAAATTCCG 1200
consensus_6642#1      GTCAACTATAAAAGATGAACATATCAGCCGTTTTACATCAGATAACAAGGAGAAATTCCG 359
                      ************************************************************

consensus_6642#0      TGGAATGGCCGGTGTAGTTGTGACTACATATAACATGGTTGCATTTGGAGGTAAACGGTC 1260
consensus_6642#1      TGGAATGGCCGGTGTAGTTGTGACTACATATAACATGGTTGCATTTGGAGGTAAACGGTC 419
                      ************************************************************

consensus_6642#0      TGAAGACTCTGAGAAGATAATTGAAGAAATTCGAAATAGGGAGTGGGGCTTGCTCCTAAT 1320
consensus_6642#1      TGAAGACTCTGAGGAGATAATTGAAGAAATTCGAAATAGGGAGTGGGGCTTGCTCCTAAT 479
                      ************* **********************************************

consensus_6642#0      GGATGAGGTCCATGTTGTTCCTGCACATATGTTCAGAAAGGTCATCAGCATTACAAAATC 1380
consensus_6642#1      GGATGAGGTCCATGTTGTTCCTGCACATATGTTCAGAAAGGTCATCAGCATTACAAAATC 539
                      ************************************************************

consensus_6642#0      TCACTGCAAGCTTGGTCTTACTGCTACACTTGTGAGAGAGGATGAACGCATCACTGATTT 1440
consensus_6642#1      TCACTGCAAGCTTGGTCTTACTGCTACACTTGTGAGAGAGGATGAACGCATCACTGATTT 599
                      ************************************************************

consensus_6642#0      AAATTTTCTTATTGGACCAAAGCTGTATGAAGCAAACTGGTTGGATTTAGTGAAAGGTGG 1500
consensus_6642#1      AAATTTTCTTATTGGACCAAAGCTGTATGAAGCAAACTGGTTGGATTTAGTGAAAGGTGG 659
                      ************************************************************

consensus_6642#0      ATTTATTGCAAATGTGCAGTGTGCCGAAGTTTGGTGTCCCATGACCAAAGAGTTCTTTGC 1560
consensus_6642#1      ATTTATTGCAAATGTGCAGTGTGCCGAAGTTTGGTGTCCCATGACCAAAGAGTTCTTTGC 719
                      ************************************************************

consensus_6642#0      TGAGTATTTGAAAAAAGAAAATTCAAAGAAGAAGCAGGTCCTCTATGCGATGAACCCAAA 1620
consensus_6642#1      TGAGTATTTGAAAAAAGAAAATTCAAAGAAGAAGCAGGTCCTCTATGCGATGAACCCAAA 779
                      ************************************************************

consensus_6642#0      CAAATTCAGAGCTTGCGAGTTTCTAATTCGATTCCATGAGCAACAACGTGGGGACAAGAT 1680
consensus_6642#1      CAAATTCAGAGCTTGCGAGTTTCTAATTCGATTCCATGAGCAACAACGTGGGGACAAGAT 839
                      ************************************************************

consensus_6642#0      AATTGTGTTTGCCGATAATCTATTTGCACTAACTAGCTACGCAATGAAGCTCCGTAAACC 1740
consensus_6642#1      AATTGTGTTTGCCGATAATCTATTTGCACTAACTAGCTACGCAATGAAGCTCCGTAAACC 899
                      ************************************************************

consensus_6642#0      AATGATTTATGGTTCCACAAGCCATGTTGAGAGGACGAGAATTCTGCATCAATTCAAGAA 1800
consensus_6642#1      AATGATTTATGGTTCCACAAGCCATGTTGAGAGGACGAGAATTCTGCATCAATTCAAGAA 959
                      ************************************************************

consensus_6642#0      CAGCTCAGATGTGAATACAATTTTCCTTTCAAAGGTGCAGTAACTGATATTCTGATTCAA 1860
consensus_6642#1      CAGCTCAGATGTGAATACAATTTTCCTTTCAAAGGTG----------------------- 996
                      *************************************                       

consensus_6642#0      AACATACTTTTGTAAATTCAACCATCATCATCTTAACTGCATATCTACTGTCACTTAGGT 1920
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      GGGTGATAACTCGATTGATATTCCAGAAGCAAATGTGATCATACAAATTTCATCTCATGC 1980
consensus_6642#1      -GGTGATAACTCGATTGATATTCCAGAAGCAAATGTGATCATACAAATTTCATCTCATGC 1055
                       ***********************************************************

consensus_6642#0      TGGTTCACGGCGTCAAGAAGCTCAACGGTTGGGACGTATTCTCAGGGCAAAGGGTAAGCA 2040
consensus_6642#1      TGGTTCACGGCGTCAAGAAGCTCAACGGTTGGGACGTATTCTCAGGGCAAAGGGTAAGCA 1115
                      ************************************************************

consensus_6642#0      TCAAGACAGGATGGCTGGTGGAAAAGAAGAATACAATGCGTTCTTCTACTCTCTTGTATC 2100
consensus_6642#1      TCAAGACAGGATGGCTGGTGGAAAAGAAGAATACAATGCGTTCTTCTACTCTCTTGTATC 1175
                      ************************************************************

consensus_6642#0      GACTGACACTCAGGAGATGTACTACTCAACTAAAAGGCAACAATTTCTTATTGACCAGGG 2160
consensus_6642#1      GACTGACACTCAGGAGATGTACTACTCAACTAAAAGGCAACAATTTCTTATTGACCAGGG 1235
                      ************************************************************

consensus_6642#0      ATATAGCTTCAAGGTGATCACCAGCTTGCCGCCACCTGAAGAATTACCTAACCTGAAATA 2220
consensus_6642#1      ATATAGCTTCAAGGTGATCACCAGCTTGCCGCCACCTGAAGAATTACCTAACCTGAAATA 1295
                      ************************************************************

consensus_6642#0      TTACACACTTAATGATCAGCTTGAACTTTTGGCACAAGTAGGTGTTTTCTGTACCTGTTG 2280
consensus_6642#1      TTACACACTTAATGATCAGCTTGAACTTTTGGCACAA----------------------- 1332
                      *************************************                       

consensus_6642#0      TTTGTAAGCTGCTACTTCTTTATTTCTAATTGTGCGAGCTTGCTTGTAAACTCACTTCGC 2340
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      CACTTAAACCAGTTGCTGAGTGCAAGGGATGACATGATTGGCATTGAGCACTTGGAAGAG 2400
consensus_6642#1      ------------TTGCTGAGTGCAAGGGATGACATGATTGGCATTGAGCACTTGGAAGAG 1380
                                  ************************************************

consensus_6642#0      GATTCTGATGGCAAGGCTCTTATGAAAGCACGGCGATCTGCTGGATCAATGAGTGCCTTT 2460
consensus_6642#1      GATTCTGATGGCAAGGCACTTATGAAAGCACGGCGATCTGCTGGATCAATGAGTGCCTTT 1440
                      ***************** ******************************************

consensus_6642#0      TCTGGATCGGGGGGAATGGTCTACATGGAGTACAGCACTGGTAAGGGGAAGGCTGGAGCT 2520
consensus_6642#1      TCTGGATCGGGGGGAATGGTCTACATGGAGTACAGCACTGGTAAGGGGAAGGCTGGAGCT 1500
                      ************************************************************

consensus_6642#0      TCCAAGAAACCGAAGGACCCTTCAAAGAGGCATTACCTGTTTAAGAAGCGTTATCAATGA 2580
consensus_6642#1      TCCAAGAAACCGAAGGACCCTTCAAAGAGGCATTACCTGTTTAAGAAGCGTTATCAATGA 1560
                      ************************************************************

consensus_6642#0      TCTTGATAACCGGCGTTGTTTCCTTCCTTTGCCTATCTCATCTGCAAAAATACTGAATAC 2640
consensus_6642#1      TCTTGATAACCGGCGTTGTTTCCTTCCTTTGCCTATCTCATCTGCAAAAATACTGAATAC 1620
                      ************************************************************

consensus_6642#0      GAGTTATGGTTAAGGAATTCCAATGATTAACGTGGAGTGGGGGAGGTTCCCATTAGCGCA 2700
consensus_6642#1      GAGTTATGGTTAAGGAATTCCAATGATTAACGTGGAGTGGGGGAGGTTC----------- 1669
                      *************************************************           

consensus_6642#0      TCGACCAGCATTTTTGTTAACTTGCCGAGATATTTGCATCAACATCCAACGGCAATAAGC 2760
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      ACTTATTTGGTCGCACGCCCTTGTGTTTGCTAATGAGAAAAAACTTGGCATTTGCCTTGG 2820
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      TCCTGAAGATGTAAATACTGTTGATGCAAATACTTCTGTAAGGCTTATATGACATCTAGT 2880
consensus_6642#1      ------------------------------------------------------------
                                                                                  

consensus_6642#0      TATTTTCCGG 2890
consensus_6642#1      ----------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)