cluster # 6653

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Oryza sativa
cluster # 6653 cluster # 6653 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6653#0 length = 579 sequences # 4

consensusID : consensus_6653#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 579
fasta sequence

                              [AACACAACTCTTGCATCACCATCTGAGAGAAACCAGGGAGATACACACAAGCAATAGCCATGGCGAGACAACAACTCCTAGGTTTGTTCTTGGTCCTC-GCCATTATGGTGGCGGTCGTGTGGGGCGACCCTAGCGGCGGCTGCGACCAAGACCGGCAGGACATGATCCGGGAGTGCAAGAAGTACGAGGGGTGGCCGGCGGAGCCCAAAATCGAGCCGTCAGAGGCGTGCTGCGCCGTGTGGCAAAGGGCCAACATCCCCTGCCTGTGCGCCGGCGTCACCAAGGAGAAGGAGAAGGTGTGGTGCATGGAGAAGGTCGTCTATGTCGCCAAGTTCTGCAAGAAGCCGTTCCAGCCTGGCTACCAGTGCGGAAGCTACACTGTTCCATCGAGCCTA-GGGCAATAAATAGTACGTTGTTACTGATTTTTATTTTTCCTTGTGACAGAAGAAGTACTTCTGGGATTAGTTTTCATGTCTCGTGACATGCACAATGTATAACTTCTGTGATTTGTGTGGACTGCAAAAGTGGGAAAAACTGAGAATTAATAAAAACAGAAACTTCTTCTAATTAAAAAAAAAA]

[+] EMBL AK111061             [AACACAACTCTTGCATCACCATCTGAGAGAAACCAGGGAGATACACACAAGCAATAGCCATGGCGAGACAACAACTCCTAGGTTTGTTCTTGGTCCTC GCCATTATGGTGGCGGTCGTGTGGGGCGACCCTAGCGGCGGCTGCGACCAAGACCGGCAGGACATGATCCGGGAGTGCAAGAAGTACGAGGGGTGGCCGGCGGAGCCCAAAATCGAGCCGTCAGAGGCGTGCTGCGCCGTGTGGCAAAGGGCCAACATCCCCTGCCTGTGCGCCGGCGTCACCAAGGAGAAGGAGAAGGTGTGGTGCATGGAGAAGGTCGTCTATGTCGCCAAGTTCTGCAAGAAGCCGTTCCAGCCTGGCTACCAGTGCGGAAGCTACACTGTTCCATCGAGCCTA GGGCAATAAATAGTACGTTGTTACTGATTTTTATTTTTCCTTGTGACAGAAGAAGTACTTCTGGGATTAGTTTTCATGTCTCGTGACATGCACAATGTATAACTTCTGTGATTTGTGTGGACTGCAAAATTGGGAAAAACTGAGAATTAATAAAAACAGA                        ]
[+] EMBL BI797503             [                                                                                       TCTT GTCCTCAGCCATTATGGT GCGTTCGTGT GGGCGACCCTAGC GCGGCTGCGACCAAGACCGGCAGGACATGATCCGGGAGTGCAAGAAGTACGAGGGGTGGCCGGCGGAGCCCAAAATCGAGCCGTCAGAGGCGTGCTGCGCCGTGTGGCAAAGGGCCAACATCCCCTGCCTGTGCGCCGGCGTCACCAAGGAGAAGGAGAAGGTGTGGTGCATGGAGAAGGTCGTCTATGTCGCCAAGTTCTGCAAGAAGCCGTTCCAGCCTGGCTACCAGTGCGGAAGCTACACTGTTCCATCGAGCCTA GGGCAATAAATAGTACGTTGTTACTGATTTTTATTTTTCCTTGTGACAGAAGAAGTACTTCTGGGATTAGTTTTCATGTCTCGTGACATGCAC ATGTATAACTTCTGTGATTTGTGTGGACTGC AAAGTGGGAAAAACTGAGAATTAATAAAAACAGAAACTTCTTCTAATTAAAAAAAAAA]
[+] EMBL AA750938             [                                                                                                                                                                                                                                                                                                                                                                    TGGCTACCAGTGCGGAACGTACACTGTTCCATCGAGCCTA GGG AATAAATAGTACGTTGTTACTGATTTTTATTTTTCCTTGTGACAGAAGAAGTACTTCTGGGATTAGTTTTCATGTCTCGTGACAT CACAATGTATAACTTCTGTGATTTGTGTG                                                                 ]
[-] EMBL CA760577             [                                                                                                                                                                                                                                                                                                                                                                                              agaggaCGAGACAAGGGGCAATAAATAGTACGTTGTTACTGATTTTTATTTTTCCTTGTGACAGAAGAAGTACTTCTGGGATTAGTTTTCATGTCTCGTGACATGCACAATGTATAACTTCTGTGATTTGTGTGGACTGCAAAAGTGGG                                                  ]




>consensus_6653#0
AACACAACTCTTGCATCACCATCTGAGAGAAACCAGGGAGATACACACAAGCAATAGCCA
TGGCGAGACAACAACTCCTAGGTTTGTTCTTGGTCCTCGCCATTATGGTGGCGGTCGTGT
GGGGCGACCCTAGCGGCGGCTGCGACCAAGACCGGCAGGACATGATCCGGGAGTGCAAGA
AGTACGAGGGGTGGCCGGCGGAGCCCAAAATCGAGCCGTCAGAGGCGTGCTGCGCCGTGT
GGCAAAGGGCCAACATCCCCTGCCTGTGCGCCGGCGTCACCAAGGAGAAGGAGAAGGTGT
GGTGCATGGAGAAGGTCGTCTATGTCGCCAAGTTCTGCAAGAAGCCGTTCCAGCCTGGCT
ACCAGTGCGGAAGCTACACTGTTCCATCGAGCCTAGGGCAATAAATAGTACGTTGTTACT
GATTTTTATTTTTCCTTGTGACAGAAGAAGTACTTCTGGGATTAGTTTTCATGTCTCGTG
ACATGCACAATGTATAACTTCTGTGATTTGTGTGGACTGCAAAAGTGGGAAAAACTGAGA
ATTAATAAAAACAGAAACTTCTTCTAATTAAAAAAAAAA

clustalw multiple alignements is not computed in this case