Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6661 cluster # 6661       Sequences # 4       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6661#0 length = 1658 sequences # 1  
consensus_6661#1 length = 771 sequences # 1  
consensus_6661#2 length = 592 sequences # 1  
consensus_6661#3 length = 528 sequences # 1  

consensusID : consensus_6661#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1658
fasta sequence
                              [CCCTTTCCCTTCTTCCGACGGACGAGCGGCGAGCTAGGCTTTGGCTCTGCCTCTGGTTCTGGCCATTCCCTTCCTCCCGCCGCACGCATCCTCTGATCCTCCCTCCCTCCCTCCCTCCTCGATCCACGCGCGGTCCGAGCTTGGTACATCACCTTCTTGAGGTTAAGATGTTGGGGCGCGCAATACGCAGTATGGAGGTTATGGTGCATTCTTCAACCTTCCTTCTTCCAAAGTTGCATCAGCCTGCCAACTCTCCAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTTCCACGATTCGTGCCCCGCCTGTGGACTCATGCAAAGCTAAGAATCTGTGCTGATGGAGGTGCCAATCGTATATTCGATGAGATGTTTCAGATGACTAATGATCCAGACTATGAAAGCACCCGAAAAAGGTATATTCCAGAAATAATTGAGGGAGATATGGATTCTATAAGGCCAGAAGTGAAACAGTTCTACTCTAGCCAGGGATCTAAAATTTCTGATAAATCACATAACCAAGAGACAACAGATTTGCACAAGTGTATTTCTCGGATCCATCGTTGTACACCTGATCATGAAAAAACAAATCTTTGTGTTCTTGTGACTGGAGCACTTGGTGGAAGGTTTGATCATGAGGCTGCTAATATCAACATTCTGTATTTGTTCTCGGACATGAGGATTGTTCTTCTATCAGATGACTGCTTGATTCGGCTTCTTCCCAAAACACACAAGCATGAGATCTATATTGAGTCATCTGTTGAAGGGCCACATTGTGGACTTTTTCCTGTTGGAGCACCATCTGGAAGCACTACAACCACTGGCCTGAAGTGGAACTTGAGTGAAGCGAAGATGAGATTTGGGAGTATGATAAGCACATCCAACATTGTTCACGCAGAAAAGGTTACTGTACAATCCGATGCAGATCTTCTCTGGACAATTTCCCTCCGAAATCTGACCTGAAGAGCCACCTCCACTTTGCACCCTTCGCCAGTTTTCCCCTTCTCTGGCATATCTTGGTGTTGTGTGTAATCAGCCTAGATCCTGTACAGCTGTTTATGAGTTCAAAGGCAGTTCTGCTTCTGCATCGGCCAAATAATTTTCCCTGCTTCATGATAAAGCAATTCATGATGCTCATGAGGTTAGAAACTTTTAAGGAGGAGCTGCCAGTGGATTGCATGAACACCACAGGCAGATGTATGATGTAATTCCTTTATTGGTTTGTTTCTGTGGGATCGGATGAGCATATGATCCCTGCAATACCTCTCTTCCGATTGGCACTGCGTACTCTGCACATATAACTTGCTGAAGAGAAGGATTCTTGCATTTATGCCCGCCTAAGACGGGGGAAAAGAAATATGTTTGCCTTCTCTTCTAGCCGGATTTTTTATTTCTTGTTTTCAGACATTAGTATGTTTTGCATTGTCTCGTCTATCCATATTACAGATTACATCAAGTGTGTAAAAAAGACGGATCAGAGATGAACTGATTTTTGTCAGGTCTGGACAGCATGCAGAATAGTCCACTCCGTTCATTCCAGCTACCGGTGGCGGAGCCAGAAATTTTTTTAGCCTGGGCAAGCCTAACAAGAGATAAAAACTATATATAGAAAATTGTACAGTTTATCATAGACAAAAGTAAAGTTGATTG]

[+] EMBL AK070843             [CCCTTTCCCTTCTTCCGACGGACGAGCGGCGAGCTAGGCTTTGGCTCTGCCTCTGGTTCTGGCCATTCCCTTCCTCCCGCCGCACGCATCCTCTGATCCTCCCTCCCTCCCTCCCTCCTCGATCCACGCGCGGTCCGAGCTTGGTACATCACCTTCTTGAGGTTAAGATGTTGGGGCGCGCAATACGCAGTATGGAGGTTATGGTGCATTCTTCAACCTTCCTTCTTCCAAAGTTGCATCAGCCTGCCAACTCTCCAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTTCCACGATTCGTGCCCCGCCTGTGGACTCATGCAAAGCTAAGAATCTGTGCTGATGGAGGTGCCAATCGTATATTCGATGAGATGTTTCAGATGACTAATGATCCAGACTATGAAAGCACCCGAAAAAGGTATATTCCAGAAATAATTGAGGGAGATATGGATTCTATAAGGCCAGAAGTGAAACAGTTCTACTCTAGCCAGGGATCTAAAATTTCTGATAAATCACATAACCAAGAGACAACAGATTTGCACAAGTGTATTTCTCGGATCCATCGTTGTACACCTGATCATGAAAAAACAAATCTTTGTGTTCTTGTGACTGGAGCACTTGGTGGAAGGTTTGATCATGAGGCTGCTAATATCAACATTCTGTATTTGTTCTCGGACATGAGGATTGTTCTTCTATCAGATGACTGCTTGATTCGGCTTCTTCCCAAAACACACAAGCATGAGATCTATATTGAGTCATCTGTTGAAGGGCCACATTGTGGACTTTTTCCTGTTGGAGCACCATCTGGAAGCACTACAACCACTGGCCTGAAGTGGAACTTGAGTGAAGCGAAGATGAGATTTGGGAGTATGATAAGCACATCCAACATTGTTCACGCAGAAAAGGTTACTGTACAATCCGATGCAGATCTTCTCTGGACAATTTCCCTCCGAAATCTGACCTGAAGAGCCACCTCCACTTTGCACCCTTCGCCAGTTTTCCCCTTCTCTGGCATATCTTGGTGTTGTGTGTAATCAGCCTAGATCCTGTACAGCTGTTTATGAGTTCAAAGGCAGTTCTGCTTCTGCATCGGCCAAATAATTTTCCCTGCTTCATGATAAAGCAATTCATGATGCTCATGAGGTTAGAAACTTTTAAGGAGGAGCTGCCAGTGGATTGCATGAACACCACAGGCAGATGTATGATGTAATTCCTTTATTGGTTTGTTTCTGTGGGATCGGATGAGCATATGATCCCTGCAATACCTCTCTTCCGATTGGCACTGCGTACTCTGCACATATAACTTGCTGAAGAGAAGGATTCTTGCATTTATGCCCGCCTAAGACGGGGGAAAAGAAATATGTTTGCCTTCTCTTCTAGCCGGATTTTTTATTTCTTGTTTTCAGACATTAGTATGTTTTGCATTGTCTCGTCTATCCATATTACAGATTACATCAAGTGTGTAAAAAAGACGGATCAGAGATGAACTGATTTTTGTCAGGTCTGGACAGCATGCAGAATAGTCCACTCCGTTCATTCCAGCTACCGGTGGCGGAGCCAGAAATTTTTTTAGCCTGGGCAAGCCTAACAAGAGATAAAAACTATATATAGAAAATTGTACAGTTTATCATAGACAAAAGTAAAGTTGATTG]


>consensus_6661#0 CCCTTTCCCTTCTTCCGACGGACGAGCGGCGAGCTAGGCTTTGGCTCTGCCTCTGGTTCT GGCCATTCCCTTCCTCCCGCCGCACGCATCCTCTGATCCTCCCTCCCTCCCTCCCTCCTC GATCCACGCGCGGTCCGAGCTTGGTACATCACCTTCTTGAGGTTAAGATGTTGGGGCGCG CAATACGCAGTATGGAGGTTATGGTGCATTCTTCAACCTTCCTTCTTCCAAAGTTGCATC AGCCTGCCAACTCTCCAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTTCCAC GATTCGTGCCCCGCCTGTGGACTCATGCAAAGCTAAGAATCTGTGCTGATGGAGGTGCCA ATCGTATATTCGATGAGATGTTTCAGATGACTAATGATCCAGACTATGAAAGCACCCGAA AAAGGTATATTCCAGAAATAATTGAGGGAGATATGGATTCTATAAGGCCAGAAGTGAAAC AGTTCTACTCTAGCCAGGGATCTAAAATTTCTGATAAATCACATAACCAAGAGACAACAG ATTTGCACAAGTGTATTTCTCGGATCCATCGTTGTACACCTGATCATGAAAAAACAAATC TTTGTGTTCTTGTGACTGGAGCACTTGGTGGAAGGTTTGATCATGAGGCTGCTAATATCA ACATTCTGTATTTGTTCTCGGACATGAGGATTGTTCTTCTATCAGATGACTGCTTGATTC GGCTTCTTCCCAAAACACACAAGCATGAGATCTATATTGAGTCATCTGTTGAAGGGCCAC ATTGTGGACTTTTTCCTGTTGGAGCACCATCTGGAAGCACTACAACCACTGGCCTGAAGT GGAACTTGAGTGAAGCGAAGATGAGATTTGGGAGTATGATAAGCACATCCAACATTGTTC ACGCAGAAAAGGTTACTGTACAATCCGATGCAGATCTTCTCTGGACAATTTCCCTCCGAA ATCTGACCTGAAGAGCCACCTCCACTTTGCACCCTTCGCCAGTTTTCCCCTTCTCTGGCA TATCTTGGTGTTGTGTGTAATCAGCCTAGATCCTGTACAGCTGTTTATGAGTTCAAAGGC AGTTCTGCTTCTGCATCGGCCAAATAATTTTCCCTGCTTCATGATAAAGCAATTCATGAT GCTCATGAGGTTAGAAACTTTTAAGGAGGAGCTGCCAGTGGATTGCATGAACACCACAGG CAGATGTATGATGTAATTCCTTTATTGGTTTGTTTCTGTGGGATCGGATGAGCATATGAT CCCTGCAATACCTCTCTTCCGATTGGCACTGCGTACTCTGCACATATAACTTGCTGAAGA GAAGGATTCTTGCATTTATGCCCGCCTAAGACGGGGGAAAAGAAATATGTTTGCCTTCTC TTCTAGCCGGATTTTTTATTTCTTGTTTTCAGACATTAGTATGTTTTGCATTGTCTCGTC TATCCATATTACAGATTACATCAAGTGTGTAAAAAAGACGGATCAGAGATGAACTGATTT TTGTCAGGTCTGGACAGCATGCAGAATAGTCCACTCCGTTCATTCCAGCTACCGGTGGCG GAGCCAGAAATTTTTTTAGCCTGGGCAAGCCTAACAAGAGATAAAAACTATATATAGAAA ATTGTACAGTTTATCATAGACAAAAGTAAAGTTGATTG



consensusID : consensus_6661#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 771
fasta sequence
                              [AGGGGTAGGTGAGAAGAGACAAGGGGGCTGACCTGTTGATGGAACAATTGGTAGTTAGAACTGAACACATGGACAACAGATTTCCTGTTGCCTGTATACTTAATGTATGAATGCATTGCATAGTTCGATATTCTCGCTACAAATAGATTTTTTGTTCTTAAAATAATTCTTGTTTATGCACTAGCTTGGTACATCACCTTCTTGAGGTTAAGATGTTGGGGCGCGCAATACGCAGTATGGAGGTTATGGTGCATTCTTCAACCTTCCTTCTTCCAAAGTTGCATCAGCCTGCCAACTCTCCAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTTCCACGATTCGTGCCCCGCCTGTGGACTCATGAGCAGCAAAGCTAAGAATCTGTGCTGATGGAGGTGCCAATCGTATATTCGATGAGATGTTTCAGATGACTAATGATCCAGACTATGAAAGCACCCGAAAAAGGTAGAGTAACAACTTTCTCATTTCATTTGGATTTTGTTGTTTATTAAATTTAAATTATTCCTTGCAGATATTGATTAATGATAAGTAATAGCTGNTGCTACCTCTGATCACAAAAATATGCACTTATTATGCTTGCTGTCAAACTATATTTGNTTTGACCAAATATGGTATCTATATCATATAATTTGGGTATATCAAAATGGATGCAGTATTTTTTTAATGAAAGGTGATAAAATTTAGNGGTCAAGGNGGCATTTCGTAGACTTCAAAAAAAAAAAAAAAAAAGCGGCGCCNCCG]

[+] EMBL CA763886             [AGGGGTAGGTGAGAAGAGACAAGGGGGCTGACCTGTTGATGGAACAATTGGTAGTTAGAACTGAACACATGGACAACAGATTTCCTGTTGCCTGTATACTTAATGTATGAATGCATTGCATAGTTCGATATTCTCGCTACAAATAGATTTTTTGTTCTTAAAATAATTCTTGTTTATGCACTAGCTTGGTACATCACCTTCTTGAGGTTAAGATGTTGGGGCGCGCAATACGCAGTATGGAGGTTATGGTGCATTCTTCAACCTTCCTTCTTCCAAAGTTGCATCAGCCTGCCAACTCTCCAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTTCCACGATTCGTGCCCCGCCTGTGGACTCATGAGCAGCAAAGCTAAGAATCTGTGCTGATGGAGGTGCCAATCGTATATTCGATGAGATGTTTCAGATGACTAATGATCCAGACTATGAAAGCACCCGAAAAAGGTAGAGTAACAACTTTCTCATTTCATTTGGATTTTGTTGTTTATTAAATTTAAATTATTCCTTGCAGATATTGATTAATGATAAGTAATAGCTGNTGCTACCTCTGATCACAAAAATATGCACTTATTATGCTTGCTGTCAAACTATATTTGNTTTGACCAAATATGGTATCTATATCATATAATTTGGGTATATCAAAATGGATGCAGTATTTTTTTAATGAAAGGTGATAAAATTTAGNGGTCAAGGNGGCATTTCGTAGACTTCAAAAAAAAAAAAAAAAAAGCGGCGCCNCCG]


>consensus_6661#1 AGGGGTAGGTGAGAAGAGACAAGGGGGCTGACCTGTTGATGGAACAATTGGTAGTTAGAA CTGAACACATGGACAACAGATTTCCTGTTGCCTGTATACTTAATGTATGAATGCATTGCA TAGTTCGATATTCTCGCTACAAATAGATTTTTTGTTCTTAAAATAATTCTTGTTTATGCA CTAGCTTGGTACATCACCTTCTTGAGGTTAAGATGTTGGGGCGCGCAATACGCAGTATGG AGGTTATGGTGCATTCTTCAACCTTCCTTCTTCCAAAGTTGCATCAGCCTGCCAACTCTC CAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTTCCACGATTCGTGCCCCGCC TGTGGACTCATGAGCAGCAAAGCTAAGAATCTGTGCTGATGGAGGTGCCAATCGTATATT CGATGAGATGTTTCAGATGACTAATGATCCAGACTATGAAAGCACCCGAAAAAGGTAGAG TAACAACTTTCTCATTTCATTTGGATTTTGTTGTTTATTAAATTTAAATTATTCCTTGCA GATATTGATTAATGATAAGTAATAGCTGNTGCTACCTCTGATCACAAAAATATGCACTTA TTATGCTTGCTGTCAAACTATATTTGNTTTGACCAAATATGGTATCTATATCATATAATT TGGGTATATCAAAATGGATGCAGTATTTTTTTAATGAAAGGTGATAAAATTTAGNGGTCA AGGNGGCATTTCGTAGACTTCAAAAAAAAAAAAAAAAAAGCGGCGCCNCCG



consensusID : consensus_6661#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 592
fasta sequence
                              [TTTTTTTTTTCATGTACAACCCACCAAATACTCCCCGTCCCTTAATATAACAACCTAGGACATAATATAACAACCTAGGACCGGATGTGACACTACATAGTACAACAAATTTGAACATGCTACTATAAAGTGTCCTAAATTGCTATAATATGGGACAAAGGGAGTAGTACCCTATTTATGTGCCTAACGTCCCATAAAAGAACCTAAAGAGGAGTACATTACAAATAATATCGTAAAAAATGCTTATTTTGAGCACTTTCTGTTTAAGGGTTACTACCCCTGTTCATAAAATAAGTAAATAATTTGTTTTTTTTTTTTTGAAGTCTACAAAATGCCACCTTGACCACTAAATTTTATCAACTTTCATTAAAAAAATACTGCATCATTTTGATATAACCAAATTATATGATATAGATAACATATTTGGCCAAAACTAATATAGTTTGACAGCAAGCATAATAAGTGCATATTTTTGTGATCAGAGGTAGCAACAGCTATCACTTATCATTAATCAATATCTGCAAGGAATAATTTAAATTTAATAAACACCAAAATCCAAATGAAATGAGAAAGTTGTTACTCCCCCTTGTCT]

[+] EMBL CA760415             [TTTTTTTTTTCATGTACAACCCACCAAATACTCCCCGTCCCTTAATATAACAACCTAGGACATAATATAACAACCTAGGACCGGATGTGACACTACATAGTACAACAAATTTGAACATGCTACTATAAAGTGTCCTAAATTGCTATAATATGGGACAAAGGGAGTAGTACCCTATTTATGTGCCTAACGTCCCATAAAAGAACCTAAAGAGGAGTACATTACAAATAATATCGTAAAAAATGCTTATTTTGAGCACTTTCTGTTTAAGGGTTACTACCCCTGTTCATAAAATAAGTAAATAATTTGTTTTTTTTTTTTTGAAGTCTACAAAATGCCACCTTGACCACTAAATTTTATCAACTTTCATTAAAAAAATACTGCATCATTTTGATATAACCAAATTATATGATATAGATAACATATTTGGCCAAAACTAATATAGTTTGACAGCAAGCATAATAAGTGCATATTTTTGTGATCAGAGGTAGCAACAGCTATCACTTATCATTAATCAATATCTGCAAGGAATAATTTAAATTTAATAAACACCAAAATCCAAATGAAATGAGAAAGTTGTTACTCCCCCTTGTCT]


>consensus_6661#2 TTTTTTTTTTCATGTACAACCCACCAAATACTCCCCGTCCCTTAATATAACAACCTAGGA CATAATATAACAACCTAGGACCGGATGTGACACTACATAGTACAACAAATTTGAACATGC TACTATAAAGTGTCCTAAATTGCTATAATATGGGACAAAGGGAGTAGTACCCTATTTATG TGCCTAACGTCCCATAAAAGAACCTAAAGAGGAGTACATTACAAATAATATCGTAAAAAA TGCTTATTTTGAGCACTTTCTGTTTAAGGGTTACTACCCCTGTTCATAAAATAAGTAAAT AATTTGTTTTTTTTTTTTTGAAGTCTACAAAATGCCACCTTGACCACTAAATTTTATCAA CTTTCATTAAAAAAATACTGCATCATTTTGATATAACCAAATTATATGATATAGATAACA TATTTGGCCAAAACTAATATAGTTTGACAGCAAGCATAATAAGTGCATATTTTTGTGATC AGAGGTAGCAACAGCTATCACTTATCATTAATCAATATCTGCAAGGAATAATTTAAATTT AATAAACACCAAAATCCAAATGAAATGAGAAAGTTGTTACTCCCCCTTGTCT



consensusID : consensus_6661#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 528
fasta sequence
                              [CATCAGCCTGCCAACTCTCCAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTTCCACGATTCGGGCCCCGCCTGTGGGACTCATGCAAAGCTAAGAATCTGGTGCTGATGGAGGTGCCCATCGTATATTCGATGAGATGTTTCAGATGACTAATGATCCAGACTATGAAAGCACCCGAAAAAGGTATATTCCAGAAATAATTGAGGGAGATATGGATTCTATAAGGCCAGAAGTGAAACAGTTCTACTCTAGCCAGGTCTTTTTTCATTGCTTTCCTTTTTTTCGCACTTGTTTGTNTACAATGGTTGTCACGCAATCTGAGACATCCTAGGAGATTGCTGCAATGCAGTTATGTATGTGAAAAAAATCTGAGTTTGTTAAAGGCATAACATCTTAGTCATAAGAATGAAACTGGCAATAGCACTGAAAGCATTTTTCTTTATTACTTAAAAGCGTACCCGTCTGTCCGTCCTCCCCCACGTCACACGAACAGCTTCAAACCTTTGCTAATAAAAAAAAAA]

[+] EMBL BM420900             [CATCAGCCTGCCAACTCTCCAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTTCCACGATTCGGGCCCCGCCTGTGGGACTCATGCAAAGCTAAGAATCTGGTGCTGATGGAGGTGCCCATCGTATATTCGATGAGATGTTTCAGATGACTAATGATCCAGACTATGAAAGCACCCGAAAAAGGTATATTCCAGAAATAATTGAGGGAGATATGGATTCTATAAGGCCAGAAGTGAAACAGTTCTACTCTAGCCAGGTCTTTTTTCATTGCTTTCCTTTTTTTCGCACTTGTTTGTNTACAATGGTTGTCACGCAATCTGAGACATCCTAGGAGATTGCTGCAATGCAGTTATGTATGTGAAAAAAATCTGAGTTTGTTAAAGGCATAACATCTTAGTCATAAGAATGAAACTGGCAATAGCACTGAAAGCATTTTTCTTTATTACTTAAAAGCGTACCCGTCTGTCCGTCCTCCCCCACGTCACACGAACAGCTTCAAACCTTTGCTAATAAAAAAAAAA]


>consensus_6661#3 CATCAGCCTGCCAACTCTCCAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTT CCACGATTCGGGCCCCGCCTGTGGGACTCATGCAAAGCTAAGAATCTGGTGCTGATGGAG GTGCCCATCGTATATTCGATGAGATGTTTCAGATGACTAATGATCCAGACTATGAAAGCA CCCGAAAAAGGTATATTCCAGAAATAATTGAGGGAGATATGGATTCTATAAGGCCAGAAG TGAAACAGTTCTACTCTAGCCAGGTCTTTTTTCATTGCTTTCCTTTTTTTCGCACTTGTT TGTNTACAATGGTTGTCACGCAATCTGAGACATCCTAGGAGATTGCTGCAATGCAGTTAT GTATGTGAAAAAAATCTGAGTTTGTTAAAGGCATAACATCTTAGTCATAAGAATGAAACT GGCAATAGCACTGAAAGCATTTTTCTTTATTACTTAAAAGCGTACCCGTCTGTCCGTCCT CCCCCACGTCACACGAACAGCTTCAAACCTTTGCTAATAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6661#0      -------------------------------------------CCCTTTCCCTTCTTCCG 17
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      AGGGGTAGGTGAGAAGAGACAAGGGGGCTGACCTGTTGATGGAACAATTGGTAGTTAGAA 60
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      ACGGACGAGCGGCGAGCTAGGCTTTGGCTCTGCCTCTGGTTC-TGGCCATTCCCTTCCTC 76
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      CTGAACACATGGACAACAGATTTCCTGTTGCCTGTATACTTAATGTATGAATGCATTGCA 120
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      CCGCCGCACGCATCCTCTGATCCTCCCTCCCTCCCTCCCTCCTCGATCCACGCGCG-GTC 135
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      TAGTTCGATATTCTCGCTACAAATAGATTTTTTGTTCTTAAAATAATTCTTGTTTATGCA 180
consensus_6661#2      ---------------------------------------------------------TTT 3
                                                                                  

consensus_6661#0      CGAGCTTGGTACATCACCTTCTTGAGGTTAAGATGTTGGGGCGCGCAATACGCAGTATGG 195
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      CTAGCTTGGTACATCACCTTCTTGAGGTTAAGATGTTGGGGCGCGCAATACGCAGTATGG 240
consensus_6661#2      TTTTTTTCATGTACAACCCACCAAATACT----CCCCGTCCCTTAATATAACAACCTAGG 59
                                                                                  

consensus_6661#0      AGGTTATGGTGCATTCTTCAACCTTCCTTCTTCCAAAGTTGCATCAGCCTGCCAACTCTC 255
consensus_6661#3      -----------------------------------------CATCAGCCTGCCAACTCTC 19
consensus_6661#1      AGGTTATGGTGCATTCTTCAACCTTCCTTCTTCCAAAGTTGCATCAGCCTGCCAACTCTC 300
consensus_6661#2      ACATAATATAACAACCTAGGACCGGATGTGACACTACATAGTACAACAAATTTGAACATG 119
                                                                *  *        *   * 

consensus_6661#0      CAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTTCCACGATTCGTGCCCCGCC 315
consensus_6661#3      CAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTTCCACGATTCGGGCCCCGCC 79
consensus_6661#1      CAGCAAAGAAGTATGCTCTAGTTGTTCTTAATCAGAACCTTCCACGATTCGTGCCCCGCC 360
consensus_6661#2      CTACTATAAAGTGT-CCTAAATTGCTATAATATGGGACAA--AGGGAGTAGTACCCTATT 176
                      *  * *  **** * *   * *** * * *    * **       ** * *  ***    

consensus_6661#0      TGTGG-ACTCATG-----CAAAGCTAAGAATCTG-TGCTGATGGAGGTGCCAATCGTATA 368
consensus_6661#3      TGTGGGACTCATG-----CAAAGCTAAGAATCTGGTGCTGATGGAGGTGCCCATCGTATA 134
consensus_6661#1      TGTGG-ACTCATGAGCAGCAAAGCTAAGAATCTG-TGCTGATGGAGGTGCCAATCGTATA 418
consensus_6661#2      TATGTGCCTAACGT----CCCATAAAAGAACCTAAAGAGGAGTACATTACAAATAATATC 232
                      * **   ** * *     *  *   ***** **   *  **      * *  **  *** 

consensus_6661#0      TTCGATGAGA--TGTTTCAGATGACTAATGATCCAGACTATGAAAGCACCCGAAAAAGGT 426
consensus_6661#3      TTCGATGAGA--TGTTTCAGATGACTAATGATCCAGACTATGAAAGCACCCGAAAAAGGT 192
consensus_6661#1      TTCGATGAGA--TGTTTCAGATGACTAATGATCCAGACTATGAAAGCACCCGAAAAAGGT 476
consensus_6661#2      GTAAAAAATGCTTATTTTGAGCACTTTCTGTTTAAGGGTTACTACCCCTGTTCATAAAAT 292
                       *  *  *    * ***        *  ** *  **  *    *  *      * **  *

consensus_6661#0      ATATTCCAGAAATAATTGAGGGAGATATGGATTCTATAAGGC-CAGAAGTGAAACAGTTC 485
consensus_6661#3      ATATTCCAGAAATAATTGAGGGAGATATGGATTCTATAAGGC-CAGAAGTGAAACAGTTC 251
consensus_6661#1      AGAGT--AACAACTTTCTCATTTCATTTGGATTTTGTTGTTTATTAAATTTAAATTATTC 534
consensus_6661#2      A-AGTAAATAATTTGTTTTTTTTTTTTTGAAGTCTACAAAATGCCACCTTGA--CCACTA 349
                      * * *  *  *    *         * ** * * *              * *      * 

consensus_6661#0      TACTCTAGCCAGGGATCTAAAATTTCTGATAAATCACATAACCAAGAGACAACAGATTTG 545
consensus_6661#3      TACTCTAGCCAGG--TCT----TTTTTCATTGCTTTCCTTTTTTTCGCACT-TGTTTGTN 304
consensus_6661#1      C-TTGCAGATATTGATTAATGATAAGTAATAGCTGNTGCTACCTCTGATCA-CAAAAATA 592
consensus_6661#2      AATTTTATCAACT--TTCA---TTAAAAAAATACTGCATCATTTTGATATAACCAAATTA 404
                         *  *   *    *      *     *                             * 

consensus_6661#0      CACAAGTGTATTTCTCGGATCCATCGTTGTACACCTGATC--ATGAAAAAACAAATC--T 601
consensus_6661#3      TACAATGGTTGTCACGCAATCTGAGACATCCTAGGAGATT--GCTGCAATGCAGTTA--T 360
consensus_6661#1      TGCACTTATTATGCTTG---CTGTCAAACTATATTTGNTT--TGACCAAATATGGTA--T 645
consensus_6661#2      TATGATATAGATAACATATTTGGCCAAAACTAATATAGTTTGACAGCAAGCATAATAAGT 464
                                 *                    *     *        **      *   *

consensus_6661#0      TTGTGTTCTTGTGACTGGAGCACTTGGTGGAAGGTTTGATCATGAGGCTGCTAATATCAA 661
consensus_6661#3      GTATGTGAAAAAAATCTGAG---TTTGTTAAAGGCATAA-CATCTTAGTCATAAGAATGA 416
consensus_6661#1      CTATAT-CATATAATTTGGGTATATCAAAATGGATGCAG-TATTTTTTTAATGAAA--GG 701
consensus_6661#2      GCATATTTTTGTGATCAGAG---GTAGCAACAGCTATCA-CTTATCATTAATCA-----A 515
                         * *       *   * *    *       *         *     *  * *      

consensus_6661#0      CATTCTGTATTTGTTCTCGGACATGAGGATTGTTCTTCTATCAGATGACTGCTTGATTCG 721
consensus_6661#3      AACTG-GCAATAGCACT--GAAAGCATTTTTCTTTATTACTTAAAAGCGTACCCGTCTGT 473
consensus_6661#1      TGATAAAATTTAGNGGTC--AAGGNGGCATTTCGTAGACTTCAAAAAAAAAAAAAAAAAA 759
consensus_6661#2      TATCTGCAAGGAATAATTTAAATTTAATAAACACCAAAATCCAAATGAAATGAGAAAGTT 575
                                      *   *                     * *               

consensus_6661#0      GCTTCTTCCCAAAACACACAAGCATGAGATCTATATTGAGTCATCTGTTGAAGGGCCACA 781
consensus_6661#3      CCGTCCTCCCCCACGTCACACGAACAGCTTCAAACCTTTGCTAATAAAAAAAAAA----- 528
consensus_6661#1      GCGGCGCCNCCG------------------------------------------------ 771
consensus_6661#2      GTTACTCCCCCTTGTCT------------------------------------------- 592
                          *  * *                                                  

consensus_6661#0      TTGTGGACTTTTTCCTGTTGGAGCACCATCTGGAAGCACTACAACCACTGGCCTGAAGTG 841
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      GAACTTGAGTGAAGCGAAGATGAGATTTGGGAGTATGATAAGCACATCCAACATTGTTCA 901
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      CGCAGAAAAGGTTACTGTACAATCCGATGCAGATCTTCTCTGGACAATTTCCCTCCGAAA 961
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      TCTGACCTGAAGAGCCACCTCCACTTTGCACCCTTCGCCAGTTTTCCCCTTCTCTGGCAT 1021
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      ATCTTGGTGTTGTGTGTAATCAGCCTAGATCCTGTACAGCTGTTTATGAGTTCAAAGGCA 1081
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      GTTCTGCTTCTGCATCGGCCAAATAATTTTCCCTGCTTCATGATAAAGCAATTCATGATG 1141
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      CTCATGAGGTTAGAAACTTTTAAGGAGGAGCTGCCAGTGGATTGCATGAACACCACAGGC 1201
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      AGATGTATGATGTAATTCCTTTATTGGTTTGTTTCTGTGGGATCGGATGAGCATATGATC 1261
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      CCTGCAATACCTCTCTTCCGATTGGCACTGCGTACTCTGCACATATAACTTGCTGAAGAG 1321
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      AAGGATTCTTGCATTTATGCCCGCCTAAGACGGGGGAAAAGAAATATGTTTGCCTTCTCT 1381
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      TCTAGCCGGATTTTTTATTTCTTGTTTTCAGACATTAGTATGTTTTGCATTGTCTCGTCT 1441
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      ATCCATATTACAGATTACATCAAGTGTGTAAAAAAGACGGATCAGAGATGAACTGATTTT 1501
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      TGTCAGGTCTGGACAGCATGCAGAATAGTCCACTCCGTTCATTCCAGCTACCGGTGGCGG 1561
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      AGCCAGAAATTTTTTTAGCCTGGGCAAGCCTAACAAGAGATAAAAACTATATATAGAAAA 1621
consensus_6661#3      ------------------------------------------------------------
consensus_6661#1      ------------------------------------------------------------
consensus_6661#2      ------------------------------------------------------------
                                                                                  

consensus_6661#0      TTGTACAGTTTATCATAGACAAAAGTAAAGTTGATTG 1658
consensus_6661#3      -------------------------------------
consensus_6661#1      -------------------------------------
consensus_6661#2      -------------------------------------
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)