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Oryza sativa
cluster # 6685 cluster # 6685       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6685#0 length = 1807 sequences # 1  
consensus_6685#1 length = 1382 sequences # 1  
consensus_6685#2 length = 246 sequences # 2  

consensusID : consensus_6685#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1807
fasta sequence
                              [ATATTCGAGTTCAACAGTAAGGTTGTGTGTGTGTGCGCCTCCGGTGACGGTGATGCCGCCCGCCGCCTGTTGATCCGGTTCAATGCTTTTTGTTGATGCGAGCGAGTATGGGAATTCTTCGTGTCTGATATTGGGTGTGCGCGCGCGCCTTGCTCTGCAGGTGATGCAGGACGAGCTGCAGAAGCTGGCGCTCAAGGTGAACCACCACGAGGAGAACATCAGGTTTCTCAAGTCGGAGCTCAATGCCGTCGAGGACTCGTGCGCTGACCTGGGCATTAAAATAGGCAATTATTATTCATCGATGGCGGCAATTGCAAATAATGACACATCTGTTGAAGAAGCTGAACAACGCACTATTCAAAGTATACTCAAACAGGACGAGACAGCAGCTGGGATTATATGCCAACTGAAGATTCGTCATTATCAGCATGCATCAAAGCTGCCACTGATGAAAGATGTCCTTGGTGTCGTAGCTACCTTGGGAAAAATAAATAATGACAACCTCAGCAGGGTACTCTCAGAGTACTTGGGATTGGACAATATGCTTGGTGTCGTCTGCAAGACTTATGATGGTGTCGAGGGTCTTGAAACATATGACAAGGAAGGTATGGTTGATAAAACCAGTGGCATTCATGGACTAGGTCGCACAATTGGAAAATTTTTAGATGGAAGATTCACTGTCTTTTGTCTTGAAAATATAAAGCCATTTTCTGGTGATTTTATGATCGATGATCCTCAGAGGAAACTTCTTTTGCATAAACCAAGGTTGCCTAGTGGAGAGTTCCCACCTGGTTTTCTTGGTTTTGCAGTAAATATGATACATTTGGACCAGGCAAATTTGAGTTGTCTCACAGCTGGGGGCCACGGTCTTAGGGAAACTTTATTTTACAGCCTGTTTTCTCAGTTGCAAGTCTATAAGACTAGAGCTGAATTGCGAAATGCTATTCCTTTGATAAATGATGGTGCTGTTTCTCTTGATGGGTCTATACTAAGACCTAATGGCTCATTCTGCCTAGGTAATAGGTATGCAATTATATGGATTTATCCTTTAACATCACATCATATACTTTTATTTGATCATTAGTGTTCTGCATATTGTGGGTCCTTCGGTGATATTTAATTGTCCTTTCATTTTATGAGTATATGCGTGATACATTACCCTGGTTTGCTTACTACATAAAGTCTGGTAACACTAATTTGCACTGTTCTGTAACAAGCATATTAAGCTTAATTCCACCTCTTCTTTTTGTTAATGATTATACATGACCTTACTTTTGAAGGGCAAGCTTAGGAATACAATTTCCTGTAACTGCAAATCTTGGGGTCTCAAACTTACCCGTAACTATCACTGAACTGGAGGAGCAAGTTAAACATAAGAATTGGGAAAAGGAAAGGCTTCTCGAGGATATAAAAAGACAAGAAGATTTGTTGAACCAAGTTAAGGATTTGTTCAGCAAGAAAAAGGAACAGTTCATGGCTTATATCACTCAACCAGGAATGTTACAGAGAGCATCGCAGGCTTCACCGACAATTCCTTCACCAGCTACTCCTGGAAGCAATCCATTTGGATCAAGGCCTCCCCACCTGCGGTAATAGCATAAGACTCTAGGCATTTCCTTCAGATTGGAGTTTGCCAGTGATAGATGATGGCTTGATGGCTTCATGCCGTCAGAATGCATTGTGCAACAATCTTGATGGCATTCGAGGAAAAAAAACAATCTTGATGTTACTGGCATACCATATGTTGCTAAGTTAGTCTGTCATTTTGCTAGTTGCAAGTTGCAACAGATTATACTCTCTTAGTTTT]

[+] EMBL AK103537             [ATATTCGAGTTCAACAGTAAGGTTGTGTGTGTGTGCGCCTCCGGTGACGGTGATGCCGCCCGCCGCCTGTTGATCCGGTTCAATGCTTTTTGTTGATGCGAGCGAGTATGGGAATTCTTCGTGTCTGATATTGGGTGTGCGCGCGCGCCTTGCTCTGCAGGTGATGCAGGACGAGCTGCAGAAGCTGGCGCTCAAGGTGAACCACCACGAGGAGAACATCAGGTTTCTCAAGTCGGAGCTCAATGCCGTCGAGGACTCGTGCGCTGACCTGGGCATTAAAATAGGCAATTATTATTCATCGATGGCGGCAATTGCAAATAATGACACATCTGTTGAAGAAGCTGAACAACGCACTATTCAAAGTATACTCAAACAGGACGAGACAGCAGCTGGGATTATATGCCAACTGAAGATTCGTCATTATCAGCATGCATCAAAGCTGCCACTGATGAAAGATGTCCTTGGTGTCGTAGCTACCTTGGGAAAAATAAATAATGACAACCTCAGCAGGGTACTCTCAGAGTACTTGGGATTGGACAATATGCTTGGTGTCGTCTGCAAGACTTATGATGGTGTCGAGGGTCTTGAAACATATGACAAGGAAGGTATGGTTGATAAAACCAGTGGCATTCATGGACTAGGTCGCACAATTGGAAAATTTTTAGATGGAAGATTCACTGTCTTTTGTCTTGAAAATATAAAGCCATTTTCTGGTGATTTTATGATCGATGATCCTCAGAGGAAACTTCTTTTGCATAAACCAAGGTTGCCTAGTGGAGAGTTCCCACCTGGTTTTCTTGGTTTTGCAGTAAATATGATACATTTGGACCAGGCAAATTTGAGTTGTCTCACAGCTGGGGGCCACGGTCTTAGGGAAACTTTATTTTACAGCCTGTTTTCTCAGTTGCAAGTCTATAAGACTAGAGCTGAATTGCGAAATGCTATTCCTTTGATAAATGATGGTGCTGTTTCTCTTGATGGGTCTATACTAAGACCTAATGGCTCATTCTGCCTAGGTAATAGGTATGCAATTATATGGATTTATCCTTTAACATCACATCATATACTTTTATTTGATCATTAGTGTTCTGCATATTGTGGGTCCTTCGGTGATATTTAATTGTCCTTTCATTTTATGAGTATATGCGTGATACATTACCCTGGTTTGCTTACTACATAAAGTCTGGTAACACTAATTTGCACTGTTCTGTAACAAGCATATTAAGCTTAATTCCACCTCTTCTTTTTGTTAATGATTATACATGACCTTACTTTTGAAGGGCAAGCTTAGGAATACAATTTCCTGTAACTGCAAATCTTGGGGTCTCAAACTTACCCGTAACTATCACTGAACTGGAGGAGCAAGTTAAACATAAGAATTGGGAAAAGGAAAGGCTTCTCGAGGATATAAAAAGACAAGAAGATTTGTTGAACCAAGTTAAGGATTTGTTCAGCAAGAAAAAGGAACAGTTCATGGCTTATATCACTCAACCAGGAATGTTACAGAGAGCATCGCAGGCTTCACCGACAATTCCTTCACCAGCTACTCCTGGAAGCAATCCATTTGGATCAAGGCCTCCCCACCTGCGGTAATAGCATAAGACTCTAGGCATTTCCTTCAGATTGGAGTTTGCCAGTGATAGATGATGGCTTGATGGCTTCATGCCGTCAGAATGCATTGTGCAACAATCTTGATGGCATTCGAGGAAAAAAAACAATCTTGATGTTACTGGCATACCATATGTTGCTAAGTTAGTCTGTCATTTTGCTAGTTGCAAGTTGCAACAGATTATACTCTCTTAGTTTT]


>consensus_6685#0 ATATTCGAGTTCAACAGTAAGGTTGTGTGTGTGTGCGCCTCCGGTGACGGTGATGCCGCC CGCCGCCTGTTGATCCGGTTCAATGCTTTTTGTTGATGCGAGCGAGTATGGGAATTCTTC GTGTCTGATATTGGGTGTGCGCGCGCGCCTTGCTCTGCAGGTGATGCAGGACGAGCTGCA GAAGCTGGCGCTCAAGGTGAACCACCACGAGGAGAACATCAGGTTTCTCAAGTCGGAGCT CAATGCCGTCGAGGACTCGTGCGCTGACCTGGGCATTAAAATAGGCAATTATTATTCATC GATGGCGGCAATTGCAAATAATGACACATCTGTTGAAGAAGCTGAACAACGCACTATTCA AAGTATACTCAAACAGGACGAGACAGCAGCTGGGATTATATGCCAACTGAAGATTCGTCA TTATCAGCATGCATCAAAGCTGCCACTGATGAAAGATGTCCTTGGTGTCGTAGCTACCTT GGGAAAAATAAATAATGACAACCTCAGCAGGGTACTCTCAGAGTACTTGGGATTGGACAA TATGCTTGGTGTCGTCTGCAAGACTTATGATGGTGTCGAGGGTCTTGAAACATATGACAA GGAAGGTATGGTTGATAAAACCAGTGGCATTCATGGACTAGGTCGCACAATTGGAAAATT TTTAGATGGAAGATTCACTGTCTTTTGTCTTGAAAATATAAAGCCATTTTCTGGTGATTT TATGATCGATGATCCTCAGAGGAAACTTCTTTTGCATAAACCAAGGTTGCCTAGTGGAGA GTTCCCACCTGGTTTTCTTGGTTTTGCAGTAAATATGATACATTTGGACCAGGCAAATTT GAGTTGTCTCACAGCTGGGGGCCACGGTCTTAGGGAAACTTTATTTTACAGCCTGTTTTC TCAGTTGCAAGTCTATAAGACTAGAGCTGAATTGCGAAATGCTATTCCTTTGATAAATGA TGGTGCTGTTTCTCTTGATGGGTCTATACTAAGACCTAATGGCTCATTCTGCCTAGGTAA TAGGTATGCAATTATATGGATTTATCCTTTAACATCACATCATATACTTTTATTTGATCA TTAGTGTTCTGCATATTGTGGGTCCTTCGGTGATATTTAATTGTCCTTTCATTTTATGAG TATATGCGTGATACATTACCCTGGTTTGCTTACTACATAAAGTCTGGTAACACTAATTTG CACTGTTCTGTAACAAGCATATTAAGCTTAATTCCACCTCTTCTTTTTGTTAATGATTAT ACATGACCTTACTTTTGAAGGGCAAGCTTAGGAATACAATTTCCTGTAACTGCAAATCTT GGGGTCTCAAACTTACCCGTAACTATCACTGAACTGGAGGAGCAAGTTAAACATAAGAAT TGGGAAAAGGAAAGGCTTCTCGAGGATATAAAAAGACAAGAAGATTTGTTGAACCAAGTT AAGGATTTGTTCAGCAAGAAAAAGGAACAGTTCATGGCTTATATCACTCAACCAGGAATG TTACAGAGAGCATCGCAGGCTTCACCGACAATTCCTTCACCAGCTACTCCTGGAAGCAAT CCATTTGGATCAAGGCCTCCCCACCTGCGGTAATAGCATAAGACTCTAGGCATTTCCTTC AGATTGGAGTTTGCCAGTGATAGATGATGGCTTGATGGCTTCATGCCGTCAGAATGCATT GTGCAACAATCTTGATGGCATTCGAGGAAAAAAAACAATCTTGATGTTACTGGCATACCA TATGTTGCTAAGTTAGTCTGTCATTTTGCTAGTTGCAAGTTGCAACAGATTATACTCTCT TAGTTTT



consensusID : consensus_6685#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1382
fasta sequence
                              [ATATTCGAGTTCAACAGTAAGGTGATGCAGGACGAGCTGCAGAAGCTGGCGCTCAAGGTGAACCACCACGAGGAGAACATCAGGTTTCTCAAGTCGGAGCTCAATGCCGTCGAGGACTCGTGCGCTGACCTGGGCATTAAAATAGGCAATTATTATTCATCGATGGCGGCAATTGCAAATAATGACACATCTGTTGAAGAAGCTGAACAACGCACTATTCAAAGTATACTCAAACAGGACGAGACAGCAGCTGGGATTATATGCCAACTGAAGATTCGTCATTATCAGCATGCATCAAAGCTGCCACTGATGAAAGATGTCCTTGGTGTCGTAGCTACCTTGGGAAAAATAAATAATGACAACCTCAGCAGGGTACTCTCAGAGTACTTGGGATTGGACAATATGCTTGGTGTCGTCTGCAAGACTTATGATGGTGTCGAGGGTCTTGAAACATATGACAAGGAAGGTATGGTTGATAAAACCAGTGGCATTCATGGACTAGGTCGCACAATTGGAAAATTTTTAGATGGAAGATTCACTGTCTTTTGTCTTGAAAATATAAGGCCATTTTCTGGTGATTTTATGATCGATGATCCTCAGAGGAAACTTCTTTTGCATAAACCAAGGTTGCCTAGTGGAGAGTTCCCACCTGGTTTTCTTGGTTTTGCAGTAAATATGATACATTTGGACCAGGCAAATTTGAGTTGTCTCACAGCTGGGGGCCACGGTCTTAGGGAAACTTTATTTTACAGCCTGTTTTCTCAGTTGCAAGTCTATAAGACTAGAGCTGAATTGCGAAATGCTATTCCTTTGATAAATGATGGTGCTGTTTCTCTTGATGGGTCTATACTAAGACCTAATGGCTCATTCTGCCTAGGTAATAGGGCAAGCTTAGGAATACAATTTCCTGTAACTGCAAATCTTGGGGTCTCAAACTTACCCGTAACTATCACTGAACTGGAGGAGCAAGTTAAACATAAGAATTGGGAAAAGGAAAGGCTTCTCGAGGATATAAAAAGACAAGAAGATTTGTTGAACCAAGTTAAGGATTTGTTCAGCAAGAAAAAGGAACAGTTCATGGCTTATATCACTCAACCAGGAATGTTACAGAGAGCATCGCAGGCTTCACCGACAATTCCTTCACCAGCTACTCCTGGAAGCAATCCATTTGGATCAAGGCCTCCCCACCTGCGAGGAAGATAATAGAGCAGGTAGCGAAGAATTGAAGGAACATGCAAACGGGATGTACCTTCTCCATTAATTTGTTGAAATGCGTGTGGTTTCAGAACTTTCCTGCTGGATGATGCAAGGAATTTTTGTTTTGAACATGGTGTAGAAAGCAGCTTTATCATCAATGAAGAAACCCAACTTTGATGAGAATT]

[+] EMBL AK064013             [ATATTCGAGTTCAACAGTAAGGTGATGCAGGACGAGCTGCAGAAGCTGGCGCTCAAGGTGAACCACCACGAGGAGAACATCAGGTTTCTCAAGTCGGAGCTCAATGCCGTCGAGGACTCGTGCGCTGACCTGGGCATTAAAATAGGCAATTATTATTCATCGATGGCGGCAATTGCAAATAATGACACATCTGTTGAAGAAGCTGAACAACGCACTATTCAAAGTATACTCAAACAGGACGAGACAGCAGCTGGGATTATATGCCAACTGAAGATTCGTCATTATCAGCATGCATCAAAGCTGCCACTGATGAAAGATGTCCTTGGTGTCGTAGCTACCTTGGGAAAAATAAATAATGACAACCTCAGCAGGGTACTCTCAGAGTACTTGGGATTGGACAATATGCTTGGTGTCGTCTGCAAGACTTATGATGGTGTCGAGGGTCTTGAAACATATGACAAGGAAGGTATGGTTGATAAAACCAGTGGCATTCATGGACTAGGTCGCACAATTGGAAAATTTTTAGATGGAAGATTCACTGTCTTTTGTCTTGAAAATATAAGGCCATTTTCTGGTGATTTTATGATCGATGATCCTCAGAGGAAACTTCTTTTGCATAAACCAAGGTTGCCTAGTGGAGAGTTCCCACCTGGTTTTCTTGGTTTTGCAGTAAATATGATACATTTGGACCAGGCAAATTTGAGTTGTCTCACAGCTGGGGGCCACGGTCTTAGGGAAACTTTATTTTACAGCCTGTTTTCTCAGTTGCAAGTCTATAAGACTAGAGCTGAATTGCGAAATGCTATTCCTTTGATAAATGATGGTGCTGTTTCTCTTGATGGGTCTATACTAAGACCTAATGGCTCATTCTGCCTAGGTAATAGGGCAAGCTTAGGAATACAATTTCCTGTAACTGCAAATCTTGGGGTCTCAAACTTACCCGTAACTATCACTGAACTGGAGGAGCAAGTTAAACATAAGAATTGGGAAAAGGAAAGGCTTCTCGAGGATATAAAAAGACAAGAAGATTTGTTGAACCAAGTTAAGGATTTGTTCAGCAAGAAAAAGGAACAGTTCATGGCTTATATCACTCAACCAGGAATGTTACAGAGAGCATCGCAGGCTTCACCGACAATTCCTTCACCAGCTACTCCTGGAAGCAATCCATTTGGATCAAGGCCTCCCCACCTGCGAGGAAGATAATAGAGCAGGTAGCGAAGAATTGAAGGAACATGCAAACGGGATGTACCTTCTCCATTAATTTGTTGAAATGCGTGTGGTTTCAGAACTTTCCTGCTGGATGATGCAAGGAATTTTTGTTTTGAACATGGTGTAGAAAGCAGCTTTATCATCAATGAAGAAACCCAACTTTGATGAGAATT]


>consensus_6685#1 ATATTCGAGTTCAACAGTAAGGTGATGCAGGACGAGCTGCAGAAGCTGGCGCTCAAGGTG AACCACCACGAGGAGAACATCAGGTTTCTCAAGTCGGAGCTCAATGCCGTCGAGGACTCG TGCGCTGACCTGGGCATTAAAATAGGCAATTATTATTCATCGATGGCGGCAATTGCAAAT AATGACACATCTGTTGAAGAAGCTGAACAACGCACTATTCAAAGTATACTCAAACAGGAC GAGACAGCAGCTGGGATTATATGCCAACTGAAGATTCGTCATTATCAGCATGCATCAAAG CTGCCACTGATGAAAGATGTCCTTGGTGTCGTAGCTACCTTGGGAAAAATAAATAATGAC AACCTCAGCAGGGTACTCTCAGAGTACTTGGGATTGGACAATATGCTTGGTGTCGTCTGC AAGACTTATGATGGTGTCGAGGGTCTTGAAACATATGACAAGGAAGGTATGGTTGATAAA ACCAGTGGCATTCATGGACTAGGTCGCACAATTGGAAAATTTTTAGATGGAAGATTCACT GTCTTTTGTCTTGAAAATATAAGGCCATTTTCTGGTGATTTTATGATCGATGATCCTCAG AGGAAACTTCTTTTGCATAAACCAAGGTTGCCTAGTGGAGAGTTCCCACCTGGTTTTCTT GGTTTTGCAGTAAATATGATACATTTGGACCAGGCAAATTTGAGTTGTCTCACAGCTGGG GGCCACGGTCTTAGGGAAACTTTATTTTACAGCCTGTTTTCTCAGTTGCAAGTCTATAAG ACTAGAGCTGAATTGCGAAATGCTATTCCTTTGATAAATGATGGTGCTGTTTCTCTTGAT GGGTCTATACTAAGACCTAATGGCTCATTCTGCCTAGGTAATAGGGCAAGCTTAGGAATA CAATTTCCTGTAACTGCAAATCTTGGGGTCTCAAACTTACCCGTAACTATCACTGAACTG GAGGAGCAAGTTAAACATAAGAATTGGGAAAAGGAAAGGCTTCTCGAGGATATAAAAAGA CAAGAAGATTTGTTGAACCAAGTTAAGGATTTGTTCAGCAAGAAAAAGGAACAGTTCATG GCTTATATCACTCAACCAGGAATGTTACAGAGAGCATCGCAGGCTTCACCGACAATTCCT TCACCAGCTACTCCTGGAAGCAATCCATTTGGATCAAGGCCTCCCCACCTGCGAGGAAGA TAATAGAGCAGGTAGCGAAGAATTGAAGGAACATGCAAACGGGATGTACCTTCTCCATTA ATTTGTTGAAATGCGTGTGGTTTCAGAACTTTCCTGCTGGATGATGCAAGGAATTTTTGT TTTGAACATGGTGTAGAAAGCAGCTTTATCATCAATGAAGAAACCCAACTTTGATGAGAA TT



consensusID : consensus_6685#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 246
fasta sequence
                              [GTTTGCATCTTGTCAAAAGAATACCCTTTAATTAGCTCTTC-TGCATCTTTGTTAGAGGAAGATAATAGAGCAGGTAGTGAAGAATTGAAGGAACATGCAAACGGGATGTACCTTCTCCATTAATTTGGTTGAAATGCGTGTGGTTTCAGAACTTTCCTGCTGGATGATGCCAAGGAATTTTTGTTTTGAACATGGTGTAGAAACCAGCTTTATCATCAATGAAGAAACCC-ACTTTGATGAGAAAAA]

[+] EMBL BM419517             [GTTTGCATCTTGTCAAAAGAATACCCTTTAATTAGCTCTTC TGCATCTTTGTTAGAGGAAGATAATAGAGCAGGTAGTGAAGAATTGAAGGAACATGCAAACGGGATGTACCTTCTCCATTAATTTGGTTGAAATGCGTGTGGTTTCAGAACTTTCCTGCTGGATGATGCCAAGGAATTTTTGTTTTGAACATGGTGTAGAAACCAGCTTTATCATCAATGAAGAAACCC ACTTTGATGAGAAA  ]
[+] EMBL BQ907847             [             CAAAAGAATACCCTTTAATTAGCTCTTCGTGCATCTTTGTTAGAGGAAGATAATAGAGCAGGTAGTGAAGAATTGAAGGAACATGCAAACGGGATGTACCTTCTCCATTAATTT GTTGAAATGCGTGTGGTTTCAGAACTTTCCTGCTGGATGATG CAAGGAATTTTTGTTTTGAACATGGTGTAGAAAGCAGCTTTATCATCAATGAAGAAACCCAACTTTGATGAGAAAAA]


>consensus_6685#2 GTTTGCATCTTGTCAAAAGAATACCCTTTAATTAGCTCTTCTGCATCTTTGTTAGAGGAA GATAATAGAGCAGGTAGTGAAGAATTGAAGGAACATGCAAACGGGATGTACCTTCTCCAT TAATTTGGTTGAAATGCGTGTGGTTTCAGAACTTTCCTGCTGGATGATGCCAAGGAATTT TTGTTTTGAACATGGTGTAGAAACCAGCTTTATCATCAATGAAGAAACCCACTTTGATGA GAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6685#0      ATATTCGAGTTCAACAGTAAGGTTGTGTGTGTGTGCGCCTCCGGTGACGGTGATGCCGCC 60
consensus_6685#1      ------------------------------------------------------------
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      CGCCGCCTGTTGATCCGGTTCAATGCTTTTTGTTGATGCGAGCGAGTATGGGAATTCTTC 120
consensus_6685#1      ------------------------------------------------------------
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      GTGTCTGATATTGGGTGTGCGCGCGCGCCTTGCTCTGCAGGTGATGCAGGACGAGCTGCA 180
consensus_6685#1      ------------------ATATTCGAGTTCAACAGTA-AGGTGATGCAGGACGAGCTGCA 41
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      GAAGCTGGCGCTCAAGGTGAACCACCACGAGGAGAACATCAGGTTTCTCAAGTCGGAGCT 240
consensus_6685#1      GAAGCTGGCGCTCAAGGTGAACCACCACGAGGAGAACATCAGGTTTCTCAAGTCGGAGCT 101
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      CAATGCCGTCGAGGACTCGTGCGCTGACCTGGGCATTAAAATAGGCAATTATTATTCATC 300
consensus_6685#1      CAATGCCGTCGAGGACTCGTGCGCTGACCTGGGCATTAAAATAGGCAATTATTATTCATC 161
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      GATGGCGGCAATTGCAAATAATGACACATCTGTTGAAGAAGCTGAACAACGCACTATTCA 360
consensus_6685#1      GATGGCGGCAATTGCAAATAATGACACATCTGTTGAAGAAGCTGAACAACGCACTATTCA 221
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      AAGTATACTCAAACAGGACGAGACAGCAGCTGGGATTATATGCCAACTGAAGATTCGTCA 420
consensus_6685#1      AAGTATACTCAAACAGGACGAGACAGCAGCTGGGATTATATGCCAACTGAAGATTCGTCA 281
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      TTATCAGCATGCATCAAAGCTGCCACTGATGAAAGATGTCCTTGGTGTCGTAGCTACCTT 480
consensus_6685#1      TTATCAGCATGCATCAAAGCTGCCACTGATGAAAGATGTCCTTGGTGTCGTAGCTACCTT 341
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      GGGAAAAATAAATAATGACAACCTCAGCAGGGTACTCTCAGAGTACTTGGGATTGGACAA 540
consensus_6685#1      GGGAAAAATAAATAATGACAACCTCAGCAGGGTACTCTCAGAGTACTTGGGATTGGACAA 401
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      TATGCTTGGTGTCGTCTGCAAGACTTATGATGGTGTCGAGGGTCTTGAAACATATGACAA 600
consensus_6685#1      TATGCTTGGTGTCGTCTGCAAGACTTATGATGGTGTCGAGGGTCTTGAAACATATGACAA 461
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      GGAAGGTATGGTTGATAAAACCAGTGGCATTCATGGACTAGGTCGCACAATTGGAAAATT 660
consensus_6685#1      GGAAGGTATGGTTGATAAAACCAGTGGCATTCATGGACTAGGTCGCACAATTGGAAAATT 521
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      TTTAGATGGAAGATTCACTGTCTTTTGTCTTGAAAATATAAAGCCATTTTCTGGTGATTT 720
consensus_6685#1      TTTAGATGGAAGATTCACTGTCTTTTGTCTTGAAAATATAAGGCCATTTTCTGGTGATTT 581
consensus_6685#2      --------------------GTTTGCATCTTGTCAAAAGAATACCCTTTAATTA-GCTCT 39
                                            **   *****  ** * **  ** ***  *   * * *

consensus_6685#0      TATGATCGATGATCCTCAGAGGAAACTTCTTTTGCATAAACCAAGGTTGCCTAGTGGAGA 780
consensus_6685#1      TATGATCGATGATCCTCAGAGGAAACTTCTTTTGCATAAACCAAGGTTGCCTAGTGGAGA 641
consensus_6685#2      TCTGC---ATCTTTGTTAGAGGAAGATAATAGAGCAGGTAGTGAAG--AATTGAAGGAAC 94
                      * **    **  *  * *******  *  *   ***   *   * *     *   ***  

consensus_6685#0      GTTCCCACCTGGTTTTCTTGGTTTTGCAGT--AAATATGATACATTTGGACCAGGCAAAT 838
consensus_6685#1      GTTCCCACCTGGTTTTCTTGGTTTTGCAGT--AAATATGATACATTTGGACCAGGCAAAT 699
consensus_6685#2      ATGCAAACGGGATGTACCTTCTCCATTAATTTGGTTGAAATGCGTGTGGTTTCAGAACTT 154
                       * *  **  * * * * *  *     * *     *   ** * * ***     * *  *

consensus_6685#0      TTGAGTTGTCTCACAGCTGGGGGCCACGGTCTTAGGGAAACTTTATTTTACAGCCTGTTT 898
consensus_6685#1      TTGAGTTGTCTCACAGCTGGGGGCCACGGTCTTAGGGAAACTTTATTTTACAGCCTGTTT 759
consensus_6685#2      TCCTGCTGGATGATGCCAAGGAATTTTTGTTTTG----AACATGGTGTAGAAACCAGCTT 210
                      *   * **  * *   *  **       ** **     *** *  * *   * ** * **

consensus_6685#0      TCTCAGTTGCAAGTCTATAAGACTAGAGCTGAATTGCGAAATGCTATTCCTTTGATAAAT 958
consensus_6685#1      TCTCAGTTGCAAGTCTATAAGACTAGAGCTGAATTGCGAAATGCTATTCCTTTGATAAAT 819
consensus_6685#2      TATCATCAATGAA-----GAAACCCACTTTGATGAGAAAAA------------------- 246
                      * ***      *       * **      ***   *  ***                   

consensus_6685#0      GATGGTGCTGTTTCTCTTGATGGGTCTATACTAAGACCTAATGGCTCATTCTGCCTAGGT 1018
consensus_6685#1      GATGGTGCTGTTTCTCTTGATGGGTCTATACTAAGACCTAATGGCTCATTCTGCCTAGGT 879
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      AATAGGTATGCAATTATATGGATTTATCCTTTAACATCACATCATATACTTTTATTTGAT 1078
consensus_6685#1      AATAGG------------------------------------------------------ 885
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      CATTAGTGTTCTGCATATTGTGGGTCCTTCGGTGATATTTAATTGTCCTTTCATTTTATG 1138
consensus_6685#1      ------------------------------------------------------------
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      AGTATATGCGTGATACATTACCCTGGTTTGCTTACTACATAAAGTCTGGTAACACTAATT 1198
consensus_6685#1      ------------------------------------------------------------
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      TGCACTGTTCTGTAACAAGCATATTAAGCTTAATTCCACCTCTTCTTTTTGTTAATGATT 1258
consensus_6685#1      ------------------------------------------------------------
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      ATACATGACCTTACTTTTGAAGGGCAAGCTTAGGAATACAATTTCCTGTAACTGCAAATC 1318
consensus_6685#1      -----------------------GCAAGCTTAGGAATACAATTTCCTGTAACTGCAAATC 922
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      TTGGGGTCTCAAACTTACCCGTAACTATCACTGAACTGGAGGAGCAAGTTAAACATAAGA 1378
consensus_6685#1      TTGGGGTCTCAAACTTACCCGTAACTATCACTGAACTGGAGGAGCAAGTTAAACATAAGA 982
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      ATTGGGAAAAGGAAAGGCTTCTCGAGGATATAAAAAGACAAGAAGATTTGTTGAACCAAG 1438
consensus_6685#1      ATTGGGAAAAGGAAAGGCTTCTCGAGGATATAAAAAGACAAGAAGATTTGTTGAACCAAG 1042
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      TTAAGGATTTGTTCAGCAAGAAAAAGGAACAGTTCATGGCTTATATCACTCAACCAGGAA 1498
consensus_6685#1      TTAAGGATTTGTTCAGCAAGAAAAAGGAACAGTTCATGGCTTATATCACTCAACCAGGAA 1102
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      TGTTACAGAGAGCATCGCAGGCTTCACCGACAATTCCTTCACCAGCTACTCCTGGAAGCA 1558
consensus_6685#1      TGTTACAGAGAGCATCGCAGGCTTCACCGACAATTCCTTCACCAGCTACTCCTGGAAGCA 1162
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      ATCCATTTGGATCAAGGCCTCCCCACCTGCGGTAATAGCATAAGACTCTAGGCATTTCCT 1618
consensus_6685#1      ATCCATTTGGATCAAGGCCTCCCCACCTGCG--AGGAAGATAATAGAGCAGGTAGCGAAG 1220
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      TCAGATTGGAGTTTGCCAGTGATAGATGATGGCTTGATGGCTTCATGCCGTCAGAATGCA 1678
consensus_6685#1      AATTGAAGGAACATGCAAACGGGATGTACCTTCTCCATTAATT--TGTTGA-AATGCGTG 1277
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      TTGTGCAACAATCTTGATGGCATTCGAGGAAAAAAAACAATCTTGATGTTACTGGCATAC 1738
consensus_6685#1      TGGTTTCAGAACTTTCCTGCTGGATGATGCAAGGAA------TTTTTGTTTTGAACATGG 1331
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      CATATGTTGCTAAGTTAGTCTGTCATTTTGCTAGTTGCAAGTTGCAACAGATTATACTCT 1798
consensus_6685#1      TGTAGAAAGC--AGCTTTATCATCAATGAAGAAACCCAACTTTGATGAGAATT------- 1382
consensus_6685#2      ------------------------------------------------------------
                                                                                  

consensus_6685#0      CTTAGTTTT 1807
consensus_6685#1      ---------
consensus_6685#2      ---------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)