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Oryza sativa
cluster # 6697 cluster # 6697       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6697#0 length = 3405 sequences # 3  
 consensus_6697#1 length = 514 sequences # 1  
consensusID : consensus_6697#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3405
fasta sequence 
                              [TCTCGCTAACCTCTCCCTTCGCGCGCAACTCCTTAAACCCTAGCCGCCGCCGCCGCCGCCGTCGTCGCCGTCGCCGTCGCCGCCGCCGCGCGCCATGGCGACCCTCAAGCGTAAGGCCGATTCCGCGGCCGCCGAGCTCGCGTCCCCTCCTCCCAAGGCCCCGCGGGGCTCGGAAGCACTCGCTGAATCGCCTTCCCTCGCCGGCGGGGGCAGCGAGCCCGTCGCCTGCGTGCACGACGTCTCCTACCCGGAAGGCTATGACCCGTCCGCCCCCGCCACCCACCTGCTCAACGGCGTCGGCGGCGCCGAGGGTGCTGGGCCTGCCAAGACCTTCCCGTTCCAGCTCGACCCCTTCCAGGCCGAGGCCATCCGATGCCTCGACAACGGAGAATCCGTCATGGTCTCAGCTCACACATCAGCTGGAAAGACAGTGGTTGCATTGTATGCAATAGCAATGTCTTTGCGTAATCAGCAACGTGTCATCTATACATCTCCNATCAA-GGCTTTGAGTAACCAAAAGTACAGGGAATTCACAGAAGAGTTCTCTGATGTCGGCCTCATGACTGCGGATGTTACTATTGA-GCC-AATGCATCTTGTTTGGTCATGACCACGGAAATTTGGCGTAGCATGCAGTATAAAGGATCAGAAGTCATGAGGGAAGTCGCTTGGATTATATTTGATGAAGTACACTACATGCGTGATAGAGAGAGAGGAGTGGTGTGGGAGGAAAGTATAGTGATGGCTCCTAAGAACTCACGTTTTGTGTTCCTCTCAGCTACCGTGCCTAATGCCAAGGAGTTTGCTGACTGGGTGGCTAAGAGAGTGCTTTATTTCTCAGGTACATAAGCAACCTTGTCATATAGTATACACTGACTACCGGCCTACACCTCTCCAACACTATGTATTTCCTTCTGGAGGTGATGGTTTATATCTGGTAGTTGATGAGAAGAGCAAGTTCAGAGAGGATAGTTTTCAGAAAGGTTTGAATGCGCTTGTCCCTGCTAGTGAGAATGACAAAAAGAGGGAAAATGGGAAGTGGCAGAAAGGTCTCTTGACAGGAAAACCTAGTGAGGACAGCGACATATTCAAGATGGTGAAGATGATAATTCAGCGTCAATATGACCCAGTGATACTTTTCAGCTTTAGCAAAAGGGAGTGTGAATTTCTTGCTATGCAGATGGCTAAGATGGACTTGAATGATGATGATGAGAAGGCAAACATTGAAACAATTTTTTGGAGTGCTATGGATTTGCTTTCAGATGATGATAAGAAGCTTCCCCAGGTTTCAAACATGCTTCCCTTGTTGAAACGTGGCATTGGTGTACATCATTCTGGTCTTTTGCCCATTTTGAAGGAAGTGATTGAGATACTCTTCCAAGAGGGCCTTATCAAGTGCTTGTTTGCCACAGAAACATTCAGTATTGGTTTGAACATGCCTGCAAAGACTGTTGTGTTTACCAATGTGCGAAAATTTGACGGTGATCGATTCAGATGGTTGTCAAGTGGAGAATACATCCAGATGAGTGGCCGTGCTGGTCGCCGAGGTATTGATCAGCGTGGTATCTGTATATTGATGGTAGATGAGAAAATGGAACCTTCAACTGCCAAAATGATTCTGAAAGGAAGTGCTGATAGTTTGAACAGTGCCTTTCATTTGAGCTACAATATGTTGTTAAATCAAATACGCTGTGAAGATGGTGATCCTGAAAAGCTTCTTCGGCACTCATTTTACCAATTTCAAGCTGATCGAGTTCTCCCTGATCTTGAGAAGCAAGTCAAGGAGCTGGAACTAGAGAGAAATTCCATGATTATTGAGGAGGAGGAGAACCTAAAGAGTTATTATGATCTCTTGCAGCAGTACAAAAATCTAAAGAAGGATGTCCGCGATATTGTTCATTCTCCTAAATATGTTCTACCTTTCTTGCAACCAGGAAGGCTTGCTCGCGTTCAGTACAGTACTGATGAGCAATCCACCTTCTCTATTGATGAAAACATCACTTGGGGAGTTACAATAAACTTTGAAAAGGTGAAAACCCATAGTGAAGATAGGAGGCCTGAGGATTCCGATTACACAGTTGATGTTCTCACAAGATGTTCTGTAAGCAAGGACAAAAGTGGAAAGAAGACAATGAAGATTATTCCTCTGAAAGACCGTGGAGAACCAGTTGTGATTTCCTTGCCACTTTCTCAGATTGATGGACTAAGCAGCATTCGGATGCACATACCAAAGGATCTTTTGCCTGTAGAAGCTCGAGAAAACACATTGAGGAAAGTTGATGAAGTTATTTCCAGGTTTGCTAAAGATGGGATCCCTTTATTGGATCCAGAAGAGGATATGAAAGTACAATCAAGCTCTTTCCGGAAAGCTTCCAGAAGAATAGAAGCTCTTGAAAGTTTATTTGAGAAGCACGATGTCCACAATTCTCCACATATTAAACAAAAGCTAAAAGTGTTGCATGCTAAGCAAGAATTATCAACCAAAATAAAGGCCATTAAAAGAACAATGCGGTCTTCCACTGCTTTAGCCTTCAAGGATGAGCTCAAGGCCCGAAAACGGGTTCTTCGTAGACTGGGATATATTACAAGTGAGGATGTTGTGGAAGTGAAGGGCAAAGTAGCATGCGAGATAAGTTCTGCTGATGAGCTAACATTGACAGAGCTTATGTTTAGCGGCACTCTGAAGGATGCTACAGTAGAACAGATGGTAGCGCTGCTTTCTTGCTTTGTTTGGCAGGAAAAGCTTCAGGATGCCCCAAAGCCAAGGGAGGAGCTCGACTTGCTGTTCTTCCAGTTGCAGGAGACAGCTAGAAGGGTTGCTAACCTTCAGCTTGACTGCAAGATCCAAATTGACGTGGAGAGTTTTGTGAACTCTTTCCGGCCTGATATAATGGAAGCGGTGTATTCATGGGCCAAAGGATCCAAATTCTATCAAATCATGGAGATGACCCAAGTATTTGAGGGCAGCTTGATCAGGGCCATCAGAAGGCTTGAGGAGGTCCTGCAACAGCTAATTCTGGCATCGAAATCCATCGGTGAAACCCAATTGGAAGCAAAACTTGAGGAGGCTGTCAGTAAGATCAAGAGGGATAGTGTTTGCAGCATCTTTATACCTGTAAAATAGCTTGATGGTCTCCTGAGCATGTGAAGGCTATCAAAGTCACTCTTTCTGTTGAGCTGCCTGATTACTGTTGAAGGGGAGCAGGTCCTTGGCAGAGAAATTTTGTTGTTACTACCCCAGTAGGCGCTAACTAAATTAATTGGAATTTTCTAAAGGAATCCAGATATGTACCCATTTTTTCATGTGTACAAATTACAGATGTATTGGAACCTTGTTTATCATTTGAAAATCTAGGTTTGAGGTAAACGGTGTAATTTGACGCTATGTTTCTCCTTCAATCTATCATG]

[+] EMBL CA754978             [TCTCGCTAACCTCTCCCTTCGCGCGCAACTCCTTAAACCCTAGCCGCCGCCGCCGCCGCCGTCGTCGCCGTCGCCGTCGCCGCCGCCGCGCGCCATGGCGACCCTCAAGCGTAAGGCCGATTCCGCGGCCGCCGAGCTCGCGTCCCCTCCTCCCAAGGCCCCGCGGGGCTCGGAAGCACTCGCTGAATCGCCTTCCCTCGCCGGCGGGGGCAGCGAGCCCGTCGCCTGCGTGCACGACGTCTCCTACCCGGAAGGCTATGACCCGTCCGCCCCCGCCACCCACCTGCTCAACGGCGTCGGCGGCGCCGAGGGTGCTGGGCCTGCCAAGACCTTCCCGTTCCAGCTCGACCCCTTCCAGGCCGAGGCCATCCGATGCCTCGACAACGGAGAATCCGTCATGGTCTCAGCTCACACATCAGCTGGAAAGACAGTGGTTGCATTGTATGCAATAGCAATGTCTTTGCGTAATCAGCAACGTGTCATCTATACATCTCCNATCAAGGGCTTTGAGTAACCAAAAGTACAGGGAATTCACAGAAGAGTTCTCTGATGTCGGCCTCATGACTGCGGATGTTACTATTGACGCC AATGCATCTTGTTTGGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK067502             [            CTCCCTTCGCGCGCAACTCCTTAAACCCTAGCCGCCGCCGCCGCCGCCGTCGTCGCCGTCGCCGTCGCCGCCGCCGCGCGCCATGGCGACCCTCAAGCGTAAGGCCGATTCCGCGGCCGCCGAGCTCGCGTCCCCTCCTCCCAAGGCCCCGCGGGGCTCGGAAGCACTCGCTGAATCGCCTTCCCTCGCCGGCGGGGGCAGCGAGCCCGTCGCCTGCGTGCACGACGTCTCCTACCCGGAAGGCTATGACCCGTCCGCCCCCGCCACCCACCTGCTCAACGGCGTCGGCGGCGCCGAGGGTGCTGGGCCTGCCAAGACCTTCCCGTTCCAGCTCGACCCCTTCCAGGCCGAGGCCATCCGATGCCTCGACAACGGAGAATCCGTCATGGTCTCAGCTCACACATCAGCTGGAAAGACAGTGGTTGCATTGTATGCAATAGCAATGTCTTTGCGTAATCAGCAACGTGTCATCTATACATCTCCAATCAA GGCTTTGAGTAACCAAAAGTACAGGGAATTCAAAGAAGAGTTCTCTGATGTCGGCCTCATGACTGGGGATGTTACTATTGA GCCAAATGCATCTTGTTTGGTCATGACCACGGAAATTTGGCGTAGCATGCAGTATAAAGGATCAGAAGTCATGAGGGAAGTCGCTTGGATTATATTTGATGAAGTACACTACATGCGTGATAGAGAGAGAGGAGTGGTGTGGGAGGAAAGTATAGTGATGGCTCCTAAGAACTCACGTTTTGTGTTCCTCTCAGCTACCGTGCCTAATGCCAAGGAGTTTGCTGACTGGGTGGCTAAGAGAGTGCTTTATTTCTCAGGTACATAAGCAACCTTGTCATATAGTATACACTGACTACCGGCCTACACCTCTCCAACACTATGTATTTCCTTCTGGAGGTGATGGTTTATATCTGGTAGTTGATGAGAAGAGCAAGTTCAGAGAGGATAGTTTTCAGAAAGGTTTGAATGCGCTTGTCCCTGCTAGTGAGAATGACAAAAAGAGGGAAAATGGGAAGTGGCAGAAAGGTCTCTTGACAGGAAAACCTAGTGAGGACAGCGACATATTCAAGATGGTGAAGATGATAATTCAGCGTCAATATGACCCAGTGATACTTTTCAGCTTTAGCAAAAGGGAGTGTGAATTTCTTGCTATGCAGATGGCTAAGATGGACTTGAATGATGATGATGAGAAGGCAAACATTGAAACAATTTTTTGGAGTGCTATGGATTTGCTTTCAGATGATGATAAGAAGCTTCCCCAGGTTTCAAACATGCTTCCCTTGTTGAAACGTGGCATTGGTGTACATCATTCTGGTCTTTTGCCCATTTTGAAGGAAGTGATTGAGATACTCTTCCAAGAGGGCCTTATCAAGTGCTTGTTTGCCACAGAAACATTCAGTATTGGTTTGAACATGCCTGCAAAGACTGTTGTGTTTACCAATGTGCGAAAATTTGACGGTGATCGATTCAGATGGTTGTCAAGTGGAGAATACATCCAGATGAGTGGCCGTGCTGGTCGCCGAGGTATTGATCAGCGTGGTATCTGTATATTGATGGTAGATGAGAAAATGGAACCTTCAACTGCCAAAATGATTCTGAAAGGAAGTGCTGATAGTTTGAACAGTGCCTTTCATTTGAGCTACAATATGTTGTTAAATCAAATACGCTGTGAAGATGGTGATCCTGAAAAGCTTCTTCGGCACTCATTTTACCAATTTCAAGCTGATCGAGTTCTCCCTGATCTTGAGAAGCAAGTCAAGGAGCTGGAACTAGAGAGAAATTCCATGATTATTGAGGAGGAGGAGAACCTAAAGAGTTATTATGATCTCTTGCAGCAGTACAAAAATCTAAAGAAGGATGTCCGCGATATTGTTCATTCTCCTAAATATGTTCTACCTTTCTTGCAACCAGGAAGGCTTGCTCGCGTTCAGTACAGTACTGATGAGCAATCCACCTTCTCTATTGATGAAAACATCACTTGGGGAGTTACAATAAACTTTGAAAAGGTGAAAACCCATAGTGAAGATAGGAGGCCTGAGGATTCCGATTACACAGTTGATGTTCTCACAAGATGTTCTGTAAGCAAGGACAAAAGTGGAAAGAAGACAATGAAGATTATTCCTCTGAAAGACCGTGGAGAACCAGTTGTGATTTCCTTGCCACTTTCTCAGATTGATGGACTAAGCAGCATTCGGATGCACATACCAAAGGATCTTTTGCCTGTAGAAGCTCGAGAAAACACATTGAGGAAAGTTGATGAAGTTATTTCCAGGTTTGCTAAAGATGGGATCCCTTTATTGGATCCAGAAGAGGATATGAAAGTACAATCAAGCTCTTTCCGGAAAGCTTCCAGAAGAATAGAAGCTCTTGAAAGTTTATTTGAGAAGCACGATGTCCACAATTCTCCACATATTAAACAAAAGCTAAAAGTGTTGCATGCTAAGCAAGAATTATCAACCAAAATAAAGGCCATTAAAAGAACAATGCGGTCTTCCACTGCTTTAGCCTTCAAGGATGAGCTCAAGGCCCGAAAACGGGTTCTTCGTAGACTGGGATATATTACAAGTGAGGATGTTGTGGAAGTGAAGGGCAAAGTAGCATGCGAGATAAGTTCTGCTGATGAGCTAACATTGACAGAGCTTATGTTTAGCGGCACTCTGAAGGATGCTACAGTAGAACAGATGGTAGCGCTGCTTTCTTGCTTTGTTTGGCAGGAAAAGCTTCAGGATGCCCCAAAGCCAAGGGAGGAGCTCGACTTGCTGTTCTTCCAGTTGCAGGAGACAGCTAGAAGGGTTGCTAACCTTCAGCTTGACTGCAAGATCCAAATTGACGTGGAGAGTTTTGTGAACTCTTTCCGGCCTGATATAATGGAAGCGGTGTATTCATGGGCCAAAGGATCCAAATTCTATCAAATCATGGAGATGACCCAAGTATTTGAGGGCAGCTTGATCAGGGCCATCAGAAGGCTTGAGGAGGTCCTGCAACAGCTAATTCTGGCATCGAAATCCATCGGTGAAACCCAATTGGAAGCAAAACTTGAGGAGGCTGTCAGTAAGATCAAGAGGGATAGTGTTTGCAGCATCTTTATACCTGTAAAATAGCTTGATGGTCTCCTGAGCATGTGAAGGCTATCAAAGTCACTCTTTCTGTTGAGCTGCCTGATTACTGTTGAAGGGGAGCAGGTCCTTGGCAGAGAAATTTTGTTGTTACTACCCCAGTAGGCGCTAACTAAATTAATTGGAATTTTCTAAAGGAATCCAGATATGTACCCATTTTTTCATGTGTACAAATTACAGATGTATTGGAACCTTGTTTATCATTTGAAAATCTAGGTTTGAGGTAAACGGTGTAATTTGACGCTATGTTTCTCCTTCAATCTATCATG]
[+] EMBL CB684820             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTTCCTTCTCCTAAATATGTTCTACCTTTCTTGCAACCAGGAAGGCTTGCTCGCGTTCAGTACAGTACTGATGAGCAATCCACCTTCTCTATTGATGAAAACATCACTTGGGGAGTTACAATAAACTTTGAAAAGGTGAAAACCCATAGTGAAGATAGGAGGCCTGAGGATTCCGATTACACAGTTGATGTTCTCACAAGATGTTCTGTAAGCAAGGACAAAAGTGGAAAGAAGACAATGAAGATTATTCCTCTGAAAGACCGTGGAGAACCAGTTGTGATTTCCTTGCCACTTTCTCAGATTGATGGACTAAGCAGCATTCGGATGCACATACCAAAGGATCTTTTGCCTGTAGAAGCTCGAGAAAACACATTGAGGAAAGTTGATGAAGTTATTTCCAGGTTTGCTAAAGATGGGATCCCTTTATTGGATCCAGAAGAGGATATGAAAGTACAATCAAGCTCTTTCCGGAAAGCTTCCAGAAGAATAGAAGCTCTTGAAAGTTTATTTGAGAAGCACGATGTCCACAATTCTCCACATATTAAACAAAAGCTAAAAGTGTTGCATGCTAAGCAAGAATTATCAACCAAAATAAAGGCCATTAAAAGAACAATGCGGTCTTCCACTGCTTTAGCCTTCAAGGATGAGCTCAAGGCCCGAAAACGGGTTCTTCGTAGACTGGGATATATTACAAGTGAGGATGTTGTGGAAGTGAAGGGCAAAGTAGCATGCGAGATAAGTTCTGCTGATGAGCTAACATTGACAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_6697#0
TCTCGCTAACCTCTCCCTTCGCGCGCAACTCCTTAAACCCTAGCCGCCGCCGCCGCCGCC
GTCGTCGCCGTCGCCGTCGCCGCCGCCGCGCGCCATGGCGACCCTCAAGCGTAAGGCCGA
TTCCGCGGCCGCCGAGCTCGCGTCCCCTCCTCCCAAGGCCCCGCGGGGCTCGGAAGCACT
CGCTGAATCGCCTTCCCTCGCCGGCGGGGGCAGCGAGCCCGTCGCCTGCGTGCACGACGT
CTCCTACCCGGAAGGCTATGACCCGTCCGCCCCCGCCACCCACCTGCTCAACGGCGTCGG
CGGCGCCGAGGGTGCTGGGCCTGCCAAGACCTTCCCGTTCCAGCTCGACCCCTTCCAGGC
CGAGGCCATCCGATGCCTCGACAACGGAGAATCCGTCATGGTCTCAGCTCACACATCAGC
TGGAAAGACAGTGGTTGCATTGTATGCAATAGCAATGTCTTTGCGTAATCAGCAACGTGT
CATCTATACATCTCCNATCAAGGCTTTGAGTAACCAAAAGTACAGGGAATTCACAGAAGA
GTTCTCTGATGTCGGCCTCATGACTGCGGATGTTACTATTGAGCCAATGCATCTTGTTTG
GTCATGACCACGGAAATTTGGCGTAGCATGCAGTATAAAGGATCAGAAGTCATGAGGGAA
GTCGCTTGGATTATATTTGATGAAGTACACTACATGCGTGATAGAGAGAGAGGAGTGGTG
TGGGAGGAAAGTATAGTGATGGCTCCTAAGAACTCACGTTTTGTGTTCCTCTCAGCTACC
GTGCCTAATGCCAAGGAGTTTGCTGACTGGGTGGCTAAGAGAGTGCTTTATTTCTCAGGT
ACATAAGCAACCTTGTCATATAGTATACACTGACTACCGGCCTACACCTCTCCAACACTA
TGTATTTCCTTCTGGAGGTGATGGTTTATATCTGGTAGTTGATGAGAAGAGCAAGTTCAG
AGAGGATAGTTTTCAGAAAGGTTTGAATGCGCTTGTCCCTGCTAGTGAGAATGACAAAAA
GAGGGAAAATGGGAAGTGGCAGAAAGGTCTCTTGACAGGAAAACCTAGTGAGGACAGCGA
CATATTCAAGATGGTGAAGATGATAATTCAGCGTCAATATGACCCAGTGATACTTTTCAG
CTTTAGCAAAAGGGAGTGTGAATTTCTTGCTATGCAGATGGCTAAGATGGACTTGAATGA
TGATGATGAGAAGGCAAACATTGAAACAATTTTTTGGAGTGCTATGGATTTGCTTTCAGA
TGATGATAAGAAGCTTCCCCAGGTTTCAAACATGCTTCCCTTGTTGAAACGTGGCATTGG
TGTACATCATTCTGGTCTTTTGCCCATTTTGAAGGAAGTGATTGAGATACTCTTCCAAGA
GGGCCTTATCAAGTGCTTGTTTGCCACAGAAACATTCAGTATTGGTTTGAACATGCCTGC
AAAGACTGTTGTGTTTACCAATGTGCGAAAATTTGACGGTGATCGATTCAGATGGTTGTC
AAGTGGAGAATACATCCAGATGAGTGGCCGTGCTGGTCGCCGAGGTATTGATCAGCGTGG
TATCTGTATATTGATGGTAGATGAGAAAATGGAACCTTCAACTGCCAAAATGATTCTGAA
AGGAAGTGCTGATAGTTTGAACAGTGCCTTTCATTTGAGCTACAATATGTTGTTAAATCA
AATACGCTGTGAAGATGGTGATCCTGAAAAGCTTCTTCGGCACTCATTTTACCAATTTCA
AGCTGATCGAGTTCTCCCTGATCTTGAGAAGCAAGTCAAGGAGCTGGAACTAGAGAGAAA
TTCCATGATTATTGAGGAGGAGGAGAACCTAAAGAGTTATTATGATCTCTTGCAGCAGTA
CAAAAATCTAAAGAAGGATGTCCGCGATATTGTTCATTCTCCTAAATATGTTCTACCTTT
CTTGCAACCAGGAAGGCTTGCTCGCGTTCAGTACAGTACTGATGAGCAATCCACCTTCTC
TATTGATGAAAACATCACTTGGGGAGTTACAATAAACTTTGAAAAGGTGAAAACCCATAG
TGAAGATAGGAGGCCTGAGGATTCCGATTACACAGTTGATGTTCTCACAAGATGTTCTGT
AAGCAAGGACAAAAGTGGAAAGAAGACAATGAAGATTATTCCTCTGAAAGACCGTGGAGA
ACCAGTTGTGATTTCCTTGCCACTTTCTCAGATTGATGGACTAAGCAGCATTCGGATGCA
CATACCAAAGGATCTTTTGCCTGTAGAAGCTCGAGAAAACACATTGAGGAAAGTTGATGA
AGTTATTTCCAGGTTTGCTAAAGATGGGATCCCTTTATTGGATCCAGAAGAGGATATGAA
AGTACAATCAAGCTCTTTCCGGAAAGCTTCCAGAAGAATAGAAGCTCTTGAAAGTTTATT
TGAGAAGCACGATGTCCACAATTCTCCACATATTAAACAAAAGCTAAAAGTGTTGCATGC
TAAGCAAGAATTATCAACCAAAATAAAGGCCATTAAAAGAACAATGCGGTCTTCCACTGC
TTTAGCCTTCAAGGATGAGCTCAAGGCCCGAAAACGGGTTCTTCGTAGACTGGGATATAT
TACAAGTGAGGATGTTGTGGAAGTGAAGGGCAAAGTAGCATGCGAGATAAGTTCTGCTGA
TGAGCTAACATTGACAGAGCTTATGTTTAGCGGCACTCTGAAGGATGCTACAGTAGAACA
GATGGTAGCGCTGCTTTCTTGCTTTGTTTGGCAGGAAAAGCTTCAGGATGCCCCAAAGCC
AAGGGAGGAGCTCGACTTGCTGTTCTTCCAGTTGCAGGAGACAGCTAGAAGGGTTGCTAA
CCTTCAGCTTGACTGCAAGATCCAAATTGACGTGGAGAGTTTTGTGAACTCTTTCCGGCC
TGATATAATGGAAGCGGTGTATTCATGGGCCAAAGGATCCAAATTCTATCAAATCATGGA
GATGACCCAAGTATTTGAGGGCAGCTTGATCAGGGCCATCAGAAGGCTTGAGGAGGTCCT
GCAACAGCTAATTCTGGCATCGAAATCCATCGGTGAAACCCAATTGGAAGCAAAACTTGA
GGAGGCTGTCAGTAAGATCAAGAGGGATAGTGTTTGCAGCATCTTTATACCTGTAAAATA
GCTTGATGGTCTCCTGAGCATGTGAAGGCTATCAAAGTCACTCTTTCTGTTGAGCTGCCT
GATTACTGTTGAAGGGGAGCAGGTCCTTGGCAGAGAAATTTTGTTGTTACTACCCCAGTA
GGCGCTAACTAAATTAATTGGAATTTTCTAAAGGAATCCAGATATGTACCCATTTTTTCA
TGTGTACAAATTACAGATGTATTGGAACCTTGTTTATCATTTGAAAATCTAGGTTTGAGG
TAAACGGTGTAATTTGACGCTATGTTTCTCCTTCAATCTATCATG

consensusID : consensus_6697#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 514
fasta sequence 
                              [TTTGTGGAACTCTTTCCGCCCTGGATATAATGGAACCGGTGTATTCCATGGCCAAAGGATCCNAATTCTATNCAATCATGGAGATGACCCAAGTATTTGAGGCCAGCTTGATCCAGGGCTATCCAGGAGGCTTGAGGAGTTCCTGCAACAGCTAATTCTGGCATCGAAGTCCATCGGTGAAACCCNATTGGAACCCAAACTTGAGGAGCTGTCAGTAAGATCAAGAGGGATATAGTGTTTGCAGCATCTTTATACCTGTAACATAGCTTGATGGTCTCCTGAGCATGTGAAGGCTATCAAAGTCGCTGTTTCTGTTGAGCTGCCTGATTTACTGTCAACGGGAGCACGGTCCTTGGCAGAGAAATTTTGTTGTTACTACCCCAGTAGGAGCTAACTAAATCCATTGGAATTTTCCAAGGAATCCAGATATGTACCCATTTTTTCATGTGTACAATTACAGATGTATTGAAACCTTGTTTATCATTTGAAAAGCTGGGTTTGAGGTAAAAAAAAA]

[+] EMBL BM418583             [TTTGTGGAACTCTTTCCGCCCTGGATATAATGGAACCGGTGTATTCCATGGCCAAAGGATCCNAATTCTATNCAATCATGGAGATGACCCAAGTATTTGAGGCCAGCTTGATCCAGGGCTATCCAGGAGGCTTGAGGAGTTCCTGCAACAGCTAATTCTGGCATCGAAGTCCATCGGTGAAACCCNATTGGAACCCAAACTTGAGGAGCTGTCAGTAAGATCAAGAGGGATATAGTGTTTGCAGCATCTTTATACCTGTAACATAGCTTGATGGTCTCCTGAGCATGTGAAGGCTATCAAAGTCGCTGTTTCTGTTGAGCTGCCTGATTTACTGTCAACGGGAGCACGGTCCTTGGCAGAGAAATTTTGTTGTTACTACCCCAGTAGGAGCTAACTAAATCCATTGGAATTTTCCAAGGAATCCAGATATGTACCCATTTTTTCATGTGTACAATTACAGATGTATTGAAACCTTGTTTATCATTTGAAAAGCTGGGTTTGAGGTAAAAAAAAA]




>consensus_6697#1
TTTGTGGAACTCTTTCCGCCCTGGATATAATGGAACCGGTGTATTCCATGGCCAAAGGAT
CCNAATTCTATNCAATCATGGAGATGACCCAAGTATTTGAGGCCAGCTTGATCCAGGGCT
ATCCAGGAGGCTTGAGGAGTTCCTGCAACAGCTAATTCTGGCATCGAAGTCCATCGGTGA
AACCCNATTGGAACCCAAACTTGAGGAGCTGTCAGTAAGATCAAGAGGGATATAGTGTTT
GCAGCATCTTTATACCTGTAACATAGCTTGATGGTCTCCTGAGCATGTGAAGGCTATCAA
AGTCGCTGTTTCTGTTGAGCTGCCTGATTTACTGTCAACGGGAGCACGGTCCTTGGCAGA
GAAATTTTGTTGTTACTACCCCAGTAGGAGCTAACTAAATCCATTGGAATTTTCCAAGGA
ATCCAGATATGTACCCATTTTTTCATGTGTACAATTACAGATGTATTGAAACCTTGTTTA
TCATTTGAAAAGCTGGGTTTGAGGTAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6697#0      TCTCGCTAACCTCTCCCTTCGCGCGCAACTCCTTAAACCCTAGCCGCCGCCGCCGCCGCC 60
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      GTCGTCGCCGTCGCCGTCGCCGCCGCCGCGCGCCATGGCGACCCTCAAGCGTAAGGCCGA 120
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TTCCGCGGCCGCCGAGCTCGCGTCCCCTCCTCCCAAGGCCCCGCGGGGCTCGGAAGCACT 180
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      CGCTGAATCGCCTTCCCTCGCCGGCGGGGGCAGCGAGCCCGTCGCCTGCGTGCACGACGT 240
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      CTCCTACCCGGAAGGCTATGACCCGTCCGCCCCCGCCACCCACCTGCTCAACGGCGTCGG 300
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      CGGCGCCGAGGGTGCTGGGCCTGCCAAGACCTTCCCGTTCCAGCTCGACCCCTTCCAGGC 360
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      CGAGGCCATCCGATGCCTCGACAACGGAGAATCCGTCATGGTCTCAGCTCACACATCAGC 420
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TGGAAAGACAGTGGTTGCATTGTATGCAATAGCAATGTCTTTGCGTAATCAGCAACGTGT 480
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      CATCTATACATCTCCNATCAAGGCTTTGAGTAACCAAAAGTACAGGGAATTCACAGAAGA 540
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      GTTCTCTGATGTCGGCCTCATGACTGCGGATGTTACTATTGAGCCAATGCATCTTGTTTG 600
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      GTCATGACCACGGAAATTTGGCGTAGCATGCAGTATAAAGGATCAGAAGTCATGAGGGAA 660
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      GTCGCTTGGATTATATTTGATGAAGTACACTACATGCGTGATAGAGAGAGAGGAGTGGTG 720
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TGGGAGGAAAGTATAGTGATGGCTCCTAAGAACTCACGTTTTGTGTTCCTCTCAGCTACC 780
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      GTGCCTAATGCCAAGGAGTTTGCTGACTGGGTGGCTAAGAGAGTGCTTTATTTCTCAGGT 840
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      ACATAAGCAACCTTGTCATATAGTATACACTGACTACCGGCCTACACCTCTCCAACACTA 900
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TGTATTTCCTTCTGGAGGTGATGGTTTATATCTGGTAGTTGATGAGAAGAGCAAGTTCAG 960
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      AGAGGATAGTTTTCAGAAAGGTTTGAATGCGCTTGTCCCTGCTAGTGAGAATGACAAAAA 1020
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      GAGGGAAAATGGGAAGTGGCAGAAAGGTCTCTTGACAGGAAAACCTAGTGAGGACAGCGA 1080
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      CATATTCAAGATGGTGAAGATGATAATTCAGCGTCAATATGACCCAGTGATACTTTTCAG 1140
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      CTTTAGCAAAAGGGAGTGTGAATTTCTTGCTATGCAGATGGCTAAGATGGACTTGAATGA 1200
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TGATGATGAGAAGGCAAACATTGAAACAATTTTTTGGAGTGCTATGGATTTGCTTTCAGA 1260
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TGATGATAAGAAGCTTCCCCAGGTTTCAAACATGCTTCCCTTGTTGAAACGTGGCATTGG 1320
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TGTACATCATTCTGGTCTTTTGCCCATTTTGAAGGAAGTGATTGAGATACTCTTCCAAGA 1380
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      GGGCCTTATCAAGTGCTTGTTTGCCACAGAAACATTCAGTATTGGTTTGAACATGCCTGC 1440
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      AAAGACTGTTGTGTTTACCAATGTGCGAAAATTTGACGGTGATCGATTCAGATGGTTGTC 1500
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      AAGTGGAGAATACATCCAGATGAGTGGCCGTGCTGGTCGCCGAGGTATTGATCAGCGTGG 1560
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TATCTGTATATTGATGGTAGATGAGAAAATGGAACCTTCAACTGCCAAAATGATTCTGAA 1620
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      AGGAAGTGCTGATAGTTTGAACAGTGCCTTTCATTTGAGCTACAATATGTTGTTAAATCA 1680
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      AATACGCTGTGAAGATGGTGATCCTGAAAAGCTTCTTCGGCACTCATTTTACCAATTTCA 1740
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      AGCTGATCGAGTTCTCCCTGATCTTGAGAAGCAAGTCAAGGAGCTGGAACTAGAGAGAAA 1800
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TTCCATGATTATTGAGGAGGAGGAGAACCTAAAGAGTTATTATGATCTCTTGCAGCAGTA 1860
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      CAAAAATCTAAAGAAGGATGTCCGCGATATTGTTCATTCTCCTAAATATGTTCTACCTTT 1920
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      CTTGCAACCAGGAAGGCTTGCTCGCGTTCAGTACAGTACTGATGAGCAATCCACCTTCTC 1980
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TATTGATGAAAACATCACTTGGGGAGTTACAATAAACTTTGAAAAGGTGAAAACCCATAG 2040
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TGAAGATAGGAGGCCTGAGGATTCCGATTACACAGTTGATGTTCTCACAAGATGTTCTGT 2100
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      AAGCAAGGACAAAAGTGGAAAGAAGACAATGAAGATTATTCCTCTGAAAGACCGTGGAGA 2160
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      ACCAGTTGTGATTTCCTTGCCACTTTCTCAGATTGATGGACTAAGCAGCATTCGGATGCA 2220
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      CATACCAAAGGATCTTTTGCCTGTAGAAGCTCGAGAAAACACATTGAGGAAAGTTGATGA 2280
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      AGTTATTTCCAGGTTTGCTAAAGATGGGATCCCTTTATTGGATCCAGAAGAGGATATGAA 2340
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      AGTACAATCAAGCTCTTTCCGGAAAGCTTCCAGAAGAATAGAAGCTCTTGAAAGTTTATT 2400
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TGAGAAGCACGATGTCCACAATTCTCCACATATTAAACAAAAGCTAAAAGTGTTGCATGC 2460
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TAAGCAAGAATTATCAACCAAAATAAAGGCCATTAAAAGAACAATGCGGTCTTCCACTGC 2520
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TTTAGCCTTCAAGGATGAGCTCAAGGCCCGAAAACGGGTTCTTCGTAGACTGGGATATAT 2580
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TACAAGTGAGGATGTTGTGGAAGTGAAGGGCAAAGTAGCATGCGAGATAAGTTCTGCTGA 2640
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      TGAGCTAACATTGACAGAGCTTATGTTTAGCGGCACTCTGAAGGATGCTACAGTAGAACA 2700
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      GATGGTAGCGCTGCTTTCTTGCTTTGTTTGGCAGGAAAAGCTTCAGGATGCCCCAAAGCC 2760
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      AAGGGAGGAGCTCGACTTGCTGTTCTTCCAGTTGCAGGAGACAGCTAGAAGGGTTGCTAA 2820
consensus_6697#1      ------------------------------------------------------------
                                                                                  

consensus_6697#0      CCTTCAGCTTGACTGCAAGATCCAAATTGACGTGGAGAGTTTTGTG-AACTCTTTCCGGC 2879
consensus_6697#1      ----------------------------------------TTTGTGGAACTCTTTCCGCC 20
                                                              ****** *********** *

consensus_6697#0      CTG-ATATAATGGAAGCGGTGTATTCATGGGCCAAAGGATCCAAATTCTATCAAATCATG 2938
consensus_6697#1      CTGGATATAATGGAACCGGTGTATTCCATGGCCAAAGGATCCNAATTCTATNCAATCATG 80
                      *** *********** **********   ************* ********  *******

consensus_6697#0      GAGATGACCCAAGTATTTGAGGGCAGCTTGATC-AGGGCCATC-AGAAGGCTTGAGGAGG 2996
consensus_6697#1      GAGATGACCCAAGTATTTGAGGCCAGCTTGATCCAGGGCTATCCAGGAGGCTTGAGGAGT 140
                      ********************** ********** ***** *** ** ************ 

consensus_6697#0      TCCTGCAACAGCTAATTCTGGCATCGAAATCCATCGGTGAAACCCAATTGGAAGCAAAAC 3056
consensus_6697#1      TCCTGCAACAGCTAATTCTGGCATCGAAGTCCATCGGTGAAACCCNATTGGAACCCAAAC 200
                      **************************** **************** ******* * ****

consensus_6697#0      TTGAGGAGGCTGTCAGTAAGATCAAGAGGGATA--GTGTTTGCAGCATCTTTATACCTGT 3114
consensus_6697#1      TTGAGGAG-CTGTCAGTAAGATCAAGAGGGATATAGTGTTTGCAGCATCTTTATACCTGT 259
                      ******** ************************  *************************

consensus_6697#0      AAAATAGCTTGATGGTCTCCTGAGCATGTGAAGGCTATCAAAGTCACTCTTTCTGTTGAG 3174
consensus_6697#1      AACATAGCTTGATGGTCTCCTGAGCATGTGAAGGCTATCAAAGTCGCTGTTTCTGTTGAG 319
                      ** ****************************************** ** ***********

consensus_6697#0      CTGCCTGATT-ACTGTTGAAGGGGAGCAGGTCCTTGGCAGAGAAATTTTGTTGTTACTAC 3233
consensus_6697#1      CTGCCTGATTTACTGTCAACGGGAGCACGGTCCTTGGCAGAGAAATTTTGTTGTTACTAC 379
                      ********** *****  * ***     ********************************

consensus_6697#0      CCCAGTAGGCGCTAACTAAATTAATTGGAATTTTCTAAAGGAATCCAGATATGTACCCAT 3293
consensus_6697#1      CCCAGTAGGAGCTAACTAAATCCATTGGAATTTTCCAA-GGAATCCAGATATGTACCCAT 438
                      ********* ***********  ************ ** *********************

consensus_6697#0      TTTTTCATGTGTACAAATTACAGATGTATTGGAACCTTGTTTATCATTTGAAAATCTAGG 3353
consensus_6697#1      TTTTTCATGTGTACAA-TTACAGATGTATTGAAACCTTGTTTATCATTTGAAAAGCTGGG 497
                      **************** ************** ********************** ** **

consensus_6697#0      TTTGAGGTAAACGGTGTAATTTGACGCTATGTTTCTCCTTCAATCTATCATG 3405
consensus_6697#1      TTTGAGGTAAAAAAAAA----------------------------------- 514
                      ***********


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)