cluster # 6704

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Oryza sativa
cluster # 6704 cluster # 6704 Sequences # 4 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6704#0 length = 3082 sequences # 3

consensus_6704#1 length = 313 sequences # 1

consensusID : consensus_6704#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3082
fasta sequence

                              [AGCATCCATCCAAATTCCCAAAAGAGGAAACTACGCTGCGCCACCGACTCTCTCGCCGCCGCACCCTCCTCCCTCCCTCCCTCGCTCGCCTCCGCCGCCGCCTCCGCTGCCTCTCCGGTGGGGGCCATGGCGAGCGCGGCGCCGCTGCCCCCCACGCCGCCGCCATCGCAGCAGCAGCAGCCGCAGCCGCAGGGCAAGGAGCAGCAGCAGCAGATGGCGGTGGCGATGAACGCGCGCCGCCTGGTGATGATCGGGGACCGCCTCAGGACCCACTTCCGCGGCGGCGGCGGGACCGTCCTCGAGCCGCCCGACCTCGCGCACCTCGTCTACGCCTTCGCCAGAGGGATCGATTTCGCTCTTTCTAGCGGCGATGTTCCTACCGTGGCCAGTGAAATACCCAGCATTTTGAAGAAGGTGTATCTGGTAGGAAAAGATCAATTTCTGCAATCTTCTGTTATGGTGCTAATGATATCATGCAAGAATGCTTGTTCTGAAAAATGGTTTCAACCCACAGATTGTACTGAAATTCTCAGGATGGCTAATGAGCTCTCTGGCAAATTCTGCACGCCTGTCAGCCAGCCAGATAATGACAGCACTGTGATCCAAATTATTTCAACAATAATGCCAAGGTACTATCCTCAATTGAAGTTTGAACGTCTAGTCACTTCGCTGGAAGCAAAGGTTGGATATGATGTTTTAATGGCCGATTTTTTCATCCATAAGAATGTGCCTCGAGAGGAAAAGATTAATCTAATTGTTGTGCAAAAGGAAGACTTAAATGCCTCATCATGTATTGCAAACCCGCCACATGTGAGCTTTTTAGTCAATGGAAAAGGCGTGGACAAGAGGACAAATGTTTCAATGGAAACAGGACCCCAGTTCCCCACTGATATTACTAGGATGCTCAAATACGGGGCAAACATCATCCAAGCTATAGGATATTTTAATGCTAACTATATCATAGCTGTTGCATTTCTGAATAAATTGGAGTCCTTTGACGCTCCAAACCTAAATGATTATGCACAACCAGTCGCTGCTGATCCTCCTGATTCTGATTTACTCGAAGGGCCATCTAGAGTTTCCCTGAAGTGCCCCATAAGTTTTAGGCGCATAAAAACTCCCATCAAAGGGCGCCTATGCAAACACTATCAGTGTTTTGATTATGATAATTACATGGAGTTGAACTTGAGGAAGCCGACTTGGCGCTGTCCATTTTGTAATACACCTTCAAACTTCACTGACCTACGGATTGATCAAAAGATGGTCAAGATATTACAAGAGACTGGAGAAGATACTATTGATGTCCTTGTGTTTGCTGATGGATCTTGGAAAGCCATTTCAACTAATGATGAGAGATCTGATAGACATTCCAGTGACGTCATTCAGCAGAGTAGAGATACTATGGACACTGATGCGACTGCTGATGATGTCATAGATCTGATAAATGAAGACAATGATGGTGATGTGCCAATGAGTTTTACCTCTGCATCAGAAGATGTGAAGCCTTTCTTGAATTGTCAGGATCTATCTGTGGCAGACTATCTTTCGGATTTGCCTATGAACACAGTTTCGCAGGCAGAAGATCTATATGCAGGCGGTGCAAGCCGTGGAAACAATGAACGTGGAAATGCCACTTCAACTTCTGGCCAAAATTCATCACTGCCTTCTACTGGCGGTCTGGGCTCTAGTTCATTCGGGACTTTGGAGTCTATTCTGCCTCATAACATTCTGCACCCTGTTATCACAGATGCAGTCTCTCCTTCTCTTGATACCTCTAATTCTGTAGTTCTGAGACAGCATGTAGCACAAGGAACACGTTCTGATATTGTGCCGTCGCAACCACGAATAGATCCACAGCTTAGATTAGAAATTGCAAGACCTCCTATACCAAGGAATGTCGCGAGAGAACCTACAGGAATTCAGGCTCTGCCAGTGCAACCACAGAGAGTGCGACCAAATATCTACAATTGTCCACCTCCTTTCCCACAATCCAGTCCAGCTTCAGCATATCAAGTACATCAGGTGACAAACGCAGATAGTGTCATTACTGCTATGAGCACTGGTATTGGATCACTATCAAGGGCTCCAGATGCTGCTACGTTATTGCAACACCAGTCAACACAGCAGGAGATTCGAGCCACGCAAAACTATCATCAAGGCCAGTTCATTGGGCTTACTGCTCCTCAAAATTTCATGGGTACAAGACCGCCGCCAGGAGTCCCAGGACAGGCTATAGGTGCTAATGCCCATGGAGCTCCCCCCGCACAACAGTCCCATCACGTTCATCGGCTAGTGAGCAATCTAATGAATCAACTTGGACAAGCTACAGTGGCTCAACCTTCCACAGCTCCACAGGTCTTGCCATCTCAACCAGGCGGCACAAGTGCAGTCAACCCGCAGATCCGCGGTCATCTTTTCCCTGCGCAACAACGCAGCCAAGCAATGAGACCACAAGCAGTGCCCCGACCTACAATTTCTCAGGCACCACCTCGTGCACAGTCTCCCTTCTTGCCAGCTACTGCTCGGCCTCCGAGCACACCTCCCCCTATCGGAACTTCCGATGATCTTCAGGAGCTTCCTGTGGATGAAAGCTGGCGTCCCACAGGGCAGATGAGAGGGAGCCTGACTGGTGAAGCTTACAGCGTAGCGATTGGACGCTACAACCCCAGTGTGAACATTGCTGGTCAGCAGACAAGTCATGTGACAAGTCAGGCTCGGCCAGCTGGTCCGGATGCGCGCAGGTAATGGTAAGTCAGATAACTATGCATTGCTCATCAAGAAGATTTTGTTGGTGGCTCTGAACTCTGAATCTGCTAAGATAGATGATCTCTCTCCCTAGCTATGTTAGATTGTCGTTAATCTGTTTAGCTTTAGGAGGTTGCGAGAGCCTAGTGAGGGTGCTAACGCGCTAAACTGACTTGCAATGCTGGAACACCGTTTTGTAGCAGTTCCTGTGCTGCTCAACTTACAAGTTAGTTATACAACCCGCGCTGCATATGTACAAAGCCTTATTATGTTGTGTATTGCGGCTATCTTATTATACTCTTTGTGTTATTTGATCATTTCTGTGCTGGATTCTGCC]

[+] EMBL AK069464             [AGCATCCATCCAAATTCCCAAAAGAGGAAACTACGCTGCGCCACCGACTCTCTCGCCGCCGCACCCTCCTCCCTCCCTCCCTCGCTCGCCTCCGCCGCCGCCTCCGCTGCCTCTCCGGTGGGGGCCATGGCGAGCGCGGCGCCGCTGCCCCCCACGCCGCCGCCATCGCAGCAGCAGCAGCCGCAGCCGCAGGGCAAGGAGCAGCAGCAGCAGATGGCGGTGGCGATGAACGCGCGCCGCCTGGTGATGATCGGGGACCGCCTCAGGACCCACTTCCGCGGCGGCGGCGGGACCGTCCTCGAGCCGCCCGACCTCGCGCACCTCGTCTACGCCTTCGCCAGAGGGATCGATTTCGCTCTTTCTAGCGGCGATGTTCCTACCGTGGCCAGTGAAATACCCAGCATTTTGAAGAAGGTGTATCTGGTAGGAAAAGATCAATTTCTGCAATCTTCTGTTATGGTGCTAATGATATCATGCAAGAATGCTTGTTCTGAAAAATGGTTTCAACCCACAGATTGTACTGAAATTCTCAGGATGGCTAATGAGCTCTCTGGCAAATTCTGCACGCCTGTCAGCCAGCCAGATAATGACAGCACTGTGATCCAAATTATTTCAACAATAATGCCAAGGTACTATCCTCAATTGAAGTTTGAACGTCTAGTCACTTCGCTGGAAGCAAAGGTTGGATATGATGTTTTAATGGCCGATTTTTTCATCCATAAGAATGTGCCTCGAGAGGAAAAGATTAATCTAATTGTTGTGCAAAAGGAAGACTTAAATGCCTCATCATGTATTGCAAACCCGCCACATGTGAGCTTTTTAGTCAATGGAAAAGGCGTGGACAAGAGGACAAATGTTTCAATGGAAACAGGACCCCAGTTCCCCACTGATATTACTAGGATGCTCAAATACGGGGCAAACATCATCCAAGCTATAGGATATTTTAATGCTAACTATATCATAGCTGTTGCATTTCTGAATAAATTGGAGTCCTTTGACGCTCCAAACCTAAATGATTATGCACAACCAGTCGCTGCTGATCCTCCTGATTCTGATTTACTCGAAGGGCCATCTAGAGTTTCCCTGAAGTGCCCCATAAGTTTTAGGCGCATAAAAACTCCCATCAAAGGGCGCCTATGCAAACACTATCAGTGTTTTGATTATGATAATTACATGGAGTTGAACTTGAGGAAGCCGACTTGGCGCTGTCCATTTTGTAATACACCTTCAAACTTCACTGACCTACGGATTGATCAAAAGATGGTCAAGATATTACAAGAGACTGGAGAAGATACTATTGATGTCCTTGTGTTTGCTGATGGATCTTGGAAAGCCATTTCAACTAATGATGAGAGATCTGATAGACATTCCAGTGACGTCATTCAGCAGAGTAGAGATACTATGGACACTGATGCGACTGCTGATGATGTCATAGATCTGATAAATGAAGACAATGATGGTGATGTGCCAATGAGTTTTACCTCTGCATCAGAAGATGTGAAGCCTTTCTTGAATTGTCAGGATCTATCTGTGGCAGACTATCTTTCGGATTTGCCTATGAACACAGTTTCGCAGGCAGAAGATCTATATGCAGGCGGTGCAAGCCGTGGAAACAATGAACGTGGAAATGCCACTTCAACTTCTGGCCAAAATTCATCACTGCCTTCTACTGGCGGTCTGGGCTCTAGTTCATTCGGGACTTTGGAGTCTATTCTGCCTCATAACATTCTGCACCCTGTTATCACAGATGCAGTCTCTCCTTCTCTTGATACCTCTAATTCTGTAGTTCTGAGACAGCATGTAGCACAAGGAACACGTTCTGATATTGTGCCGTCGCAACCACGAATAGATCCACAGCTTAGATTAGAAATTGCAAGACCTCCTATACCAAGGAATGTCGCGAGAGAACCTACAGGAATTCAGGCTCTGCCAGTGCAACCACAGAGAGTGCGACCAAATATCTACAATTGTCCACCTCCTTTCCCACAATCCAGTCCAGCTTCAGCATATCAAGTACATCAGGTGACAAACGCAGATAGTGTCATTACTGCTATGAGCACTGGTATTGGATCACTATCAAGGGCTCCAGATGCTGCTACGTTATTGCAACACCAGTCAACACAGCAGGAGATTCGAGCCACGCAAAACTATCATCAAGGCCAGTTCATTGGGCTTACTGCTCCTCAAAATTTCATGGGTACAAGACCGCCGCCAGGAGTCCCAGGACAGGCTATAGGTGCTAATGCCCATGGAGCTCCCCCCGCACAACAGTCCCATCACGTTCATCGGCTAGTGAGCAATCTAATGAATCAACTTGGACAAGCTACAGTGGCTCAACCTTCCACAGCTCCACAGGTCTTGCCATCTCAACCAGGCGGCACAAGTGCAGTCAACCCGCAGATCCGCGGTCATCTTTTCCCTGCGCAACAACGCAGCCAAGCAATGAGACCACAAGCAGTGCCCCGACCTACAATTTCTCAGGCACCACCTCGTGCACAGTCTCCCTTCTTGCCAGCTACTGCTCGGCCTCCGAGCACACCTCCCCCTATCGGAACTTCCGATGATCTTCAGGAGCTTCCTGTGGATGAAAGCTGGCGTCCCACAGGGCAGATGAGAGGGAGCCTGACTGGTGAAGCTTACAGCGTAGCGATTGGACGCTACAACCCCAGTGTGAACATTGCTGGTCAGCAGACAAGTCATGTGACAAGTCAGGCTCGGCCAGCTGGTCCGGATGCGCGCAGGTAATGGTAAGTCAGATAACTATGCATTGCTCATCAAGAAGATTTTGTTGGTGGCTCTGAACTCTGAATCTGCTAAGATAGATGATCTCTCTCCCTAGCTATGTTAGATTGTCGTTAATCTGTTTAGCTTTAGGAGGTTGCGAGAGCCTAGTGAGGGTGCTAACGCGCTAAACTGACTTGCAATGCTGGAACACCGTTTTGTAGCAGTTCCTGTGCTGCTCAACTTACAAGTTAGTTATACAACCCGCGCTGCATATGTACAAAGCCTTATTATGTTGTGTATTGCGG                                                     ]
[+] EMBL CB620939             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTCCTCTTGTATTGCAAACCCGCCACATGTGAGCTTTTTAGTCAATGGAAAAGGCGTGGACAAGAGGACAAATGTTTCAATGGAAACAGGACCCCAGTTCCCCACTGATATTACTAGGATGCTCAAATACGGGGCAAACATCATCCAAGCTATAGGATATTTTAATGCTAACTATATCATAGCTGTTGCATTTCTGAATAAATTGGAGTCCTTTGACGCTCCAAACCTAAATGATTATGCACAACCAGTCGCTGCTAATCCTCCTGATTCTGATTTACTCGAAGGGCCATCTAGAGTTTCCCTGAAGTGCCCCATAAGTTTTAGGCGCATAAAAACTCCCATCAAAGGGCGCCTATGCAAACACTATCAGTGTTTTGATTATGATAATTACATGGAGATGAACTTGAGGAAGCCGACTTGGCGCTGTCCATTTTGTAATACACCTTCAAACTTCACTGACCTACGGATTGATCAAAAGATGGTCAAGATATTACAAGAGACTGGAGAAGATACTATTGATGTCCTTGTGTTTGCTGATGGATCTTGGAAAGCCATTTCAACTAATGATGAGAGATCTGATAGACATTCCAGTGACGTCATTCAGCACAGTAGAGATACTATGGACACTGATGCGACTGCTGATGATGTCATAGATCTGATAAATGAAGACAATGATGGTGATGTGCCAATGAGTTTTACCTCTGCATCAGAAGATGTGAAGCCTTTCTTGAATTGTCANGATCTATCTGTGGCAGACTATCTTTCGGATTTGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB620940             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGACAAGCTACAGTGGCTCAACCTTCCACAGCTCCACAGGTCTTGCCATCTCAACCAGGCGGCACAAGTGCAGTCAACCCGCAGATCCGCGGTCATCTTTTCCCTGCGCAACAACGCAGCCAAGCAATGAGACCACAAGCAGTGCCCCGACCTACAATTTCTCAGGCACCACCTCGTGCACAGTCTCCCTTCTTGCCAGCTACTGCTCGGCCTCCGAGCACACCTCCCCCTATCGGAACTTCCGATGATCTTCAGGAGCTTCCTGTGGATGAAAGCTGGCGTCCCACAGGGCAGATGAGAGGGAGCCTGACTGGTGAAGCTTACAGCGTAGCGATTGGACGCTACAACCCCAGTGTGAACATTGCTGGTCAGCAGACAAGTCATGTGACAAGTCAGGCTCGGCCAGCTGGTCCGGATGCGCGCAGGTAATGGTAAGTCAGATAACTATGCATTGCTCATCAAGAAGATTTTGTTGGTGGCTCTGAACTCTGAATCTGTTAAGATAGATGATCTCTCTCCCTAGCTATGTTAGATTGTCGTTAATCTGTTTAGCTTTAGGAGGTTGCGAGAGCCTAGTGAGGGTGCTAACGCGCTAAACTGACTTGCAATGCTGGAACACCGTTTTGTAGCAGTTCCTGTGCTGCTCAACTTACAAGTTAGTTATACAACCCGCGCTGCATATGTACAAAGCCTTATTATGTTGTGTATTGCGGCTATCTTATTATACTCTTTGTGTTATTTGATCATTTCTGTGCTGGATTCTGCC]




>consensus_6704#0
AGCATCCATCCAAATTCCCAAAAGAGGAAACTACGCTGCGCCACCGACTCTCTCGCCGCC
GCACCCTCCTCCCTCCCTCCCTCGCTCGCCTCCGCCGCCGCCTCCGCTGCCTCTCCGGTG
GGGGCCATGGCGAGCGCGGCGCCGCTGCCCCCCACGCCGCCGCCATCGCAGCAGCAGCAG
CCGCAGCCGCAGGGCAAGGAGCAGCAGCAGCAGATGGCGGTGGCGATGAACGCGCGCCGC
CTGGTGATGATCGGGGACCGCCTCAGGACCCACTTCCGCGGCGGCGGCGGGACCGTCCTC
GAGCCGCCCGACCTCGCGCACCTCGTCTACGCCTTCGCCAGAGGGATCGATTTCGCTCTT
TCTAGCGGCGATGTTCCTACCGTGGCCAGTGAAATACCCAGCATTTTGAAGAAGGTGTAT
CTGGTAGGAAAAGATCAATTTCTGCAATCTTCTGTTATGGTGCTAATGATATCATGCAAG
AATGCTTGTTCTGAAAAATGGTTTCAACCCACAGATTGTACTGAAATTCTCAGGATGGCT
AATGAGCTCTCTGGCAAATTCTGCACGCCTGTCAGCCAGCCAGATAATGACAGCACTGTG
ATCCAAATTATTTCAACAATAATGCCAAGGTACTATCCTCAATTGAAGTTTGAACGTCTA
GTCACTTCGCTGGAAGCAAAGGTTGGATATGATGTTTTAATGGCCGATTTTTTCATCCAT
AAGAATGTGCCTCGAGAGGAAAAGATTAATCTAATTGTTGTGCAAAAGGAAGACTTAAAT
GCCTCATCATGTATTGCAAACCCGCCACATGTGAGCTTTTTAGTCAATGGAAAAGGCGTG
GACAAGAGGACAAATGTTTCAATGGAAACAGGACCCCAGTTCCCCACTGATATTACTAGG
ATGCTCAAATACGGGGCAAACATCATCCAAGCTATAGGATATTTTAATGCTAACTATATC
ATAGCTGTTGCATTTCTGAATAAATTGGAGTCCTTTGACGCTCCAAACCTAAATGATTAT
GCACAACCAGTCGCTGCTGATCCTCCTGATTCTGATTTACTCGAAGGGCCATCTAGAGTT
TCCCTGAAGTGCCCCATAAGTTTTAGGCGCATAAAAACTCCCATCAAAGGGCGCCTATGC
AAACACTATCAGTGTTTTGATTATGATAATTACATGGAGTTGAACTTGAGGAAGCCGACT
TGGCGCTGTCCATTTTGTAATACACCTTCAAACTTCACTGACCTACGGATTGATCAAAAG
ATGGTCAAGATATTACAAGAGACTGGAGAAGATACTATTGATGTCCTTGTGTTTGCTGAT
GGATCTTGGAAAGCCATTTCAACTAATGATGAGAGATCTGATAGACATTCCAGTGACGTC
ATTCAGCAGAGTAGAGATACTATGGACACTGATGCGACTGCTGATGATGTCATAGATCTG
ATAAATGAAGACAATGATGGTGATGTGCCAATGAGTTTTACCTCTGCATCAGAAGATGTG
AAGCCTTTCTTGAATTGTCAGGATCTATCTGTGGCAGACTATCTTTCGGATTTGCCTATG
AACACAGTTTCGCAGGCAGAAGATCTATATGCAGGCGGTGCAAGCCGTGGAAACAATGAA
CGTGGAAATGCCACTTCAACTTCTGGCCAAAATTCATCACTGCCTTCTACTGGCGGTCTG
GGCTCTAGTTCATTCGGGACTTTGGAGTCTATTCTGCCTCATAACATTCTGCACCCTGTT
ATCACAGATGCAGTCTCTCCTTCTCTTGATACCTCTAATTCTGTAGTTCTGAGACAGCAT
GTAGCACAAGGAACACGTTCTGATATTGTGCCGTCGCAACCACGAATAGATCCACAGCTT
AGATTAGAAATTGCAAGACCTCCTATACCAAGGAATGTCGCGAGAGAACCTACAGGAATT
CAGGCTCTGCCAGTGCAACCACAGAGAGTGCGACCAAATATCTACAATTGTCCACCTCCT
TTCCCACAATCCAGTCCAGCTTCAGCATATCAAGTACATCAGGTGACAAACGCAGATAGT
GTCATTACTGCTATGAGCACTGGTATTGGATCACTATCAAGGGCTCCAGATGCTGCTACG
TTATTGCAACACCAGTCAACACAGCAGGAGATTCGAGCCACGCAAAACTATCATCAAGGC
CAGTTCATTGGGCTTACTGCTCCTCAAAATTTCATGGGTACAAGACCGCCGCCAGGAGTC
CCAGGACAGGCTATAGGTGCTAATGCCCATGGAGCTCCCCCCGCACAACAGTCCCATCAC
GTTCATCGGCTAGTGAGCAATCTAATGAATCAACTTGGACAAGCTACAGTGGCTCAACCT
TCCACAGCTCCACAGGTCTTGCCATCTCAACCAGGCGGCACAAGTGCAGTCAACCCGCAG
ATCCGCGGTCATCTTTTCCCTGCGCAACAACGCAGCCAAGCAATGAGACCACAAGCAGTG
CCCCGACCTACAATTTCTCAGGCACCACCTCGTGCACAGTCTCCCTTCTTGCCAGCTACT
GCTCGGCCTCCGAGCACACCTCCCCCTATCGGAACTTCCGATGATCTTCAGGAGCTTCCT
GTGGATGAAAGCTGGCGTCCCACAGGGCAGATGAGAGGGAGCCTGACTGGTGAAGCTTAC
AGCGTAGCGATTGGACGCTACAACCCCAGTGTGAACATTGCTGGTCAGCAGACAAGTCAT
GTGACAAGTCAGGCTCGGCCAGCTGGTCCGGATGCGCGCAGGTAATGGTAAGTCAGATAA
CTATGCATTGCTCATCAAGAAGATTTTGTTGGTGGCTCTGAACTCTGAATCTGCTAAGAT
AGATGATCTCTCTCCCTAGCTATGTTAGATTGTCGTTAATCTGTTTAGCTTTAGGAGGTT
GCGAGAGCCTAGTGAGGGTGCTAACGCGCTAAACTGACTTGCAATGCTGGAACACCGTTT
TGTAGCAGTTCCTGTGCTGCTCAACTTACAAGTTAGTTATACAACCCGCGCTGCATATGT
ACAAAGCCTTATTATGTTGTGTATTGCGGCTATCTTATTATACTCTTTGTGTTATTTGAT
CATTTCTGTGCTGGATTCTGCC

consensusID : consensus_6704#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 313
fasta sequence

                              [TCAGGNTCGCCCAGCTGTTCCGGATGCGCGCAGGTAATGGTAAGTCAGATAACTATGCATTGCTCATCAAGAAGATTTTGTTGGTGGCTCTGAACTCTGAATCTGCTAAGATAGATGATCTCTCTCCCTAGCTATGTTAGATTGTCGTTAATCTGTTTAGCTTTAGGAGGTTGCGAGAGCCTAGTGAGGGTGCTAACGCGCTAAACTGACTTGCAATGCTGGAACACCGTTTTGTAGCAGTTCCTGTGCTGCTCAACTTACAAGTTAGTTATACAACCCGCGCTGCATATGTACAAANCCTTAAAAAAAAAAA]

[+] EMBL AA753584             [TCAGGNTCGCCCAGCTGTTCCGGATGCGCGCAGGTAATGGTAAGTCAGATAACTATGCATTGCTCATCAAGAAGATTTTGTTGGTGGCTCTGAACTCTGAATCTGCTAAGATAGATGATCTCTCTCCCTAGCTATGTTAGATTGTCGTTAATCTGTTTAGCTTTAGGAGGTTGCGAGAGCCTAGTGAGGGTGCTAACGCGCTAAACTGACTTGCAATGCTGGAACACCGTTTTGTAGCAGTTCCTGTGCTGCTCAACTTACAAGTTAGTTATACAACCCGCGCTGCATATGTACAAANCCTTAAAAAAAAAAA]




>consensus_6704#1
TCAGGNTCGCCCAGCTGTTCCGGATGCGCGCAGGTAATGGTAAGTCAGATAACTATGCAT
TGCTCATCAAGAAGATTTTGTTGGTGGCTCTGAACTCTGAATCTGCTAAGATAGATGATC
TCTCTCCCTAGCTATGTTAGATTGTCGTTAATCTGTTTAGCTTTAGGAGGTTGCGAGAGC
CTAGTGAGGGTGCTAACGCGCTAAACTGACTTGCAATGCTGGAACACCGTTTTGTAGCAG
TTCCTGTGCTGCTCAACTTACAAGTTAGTTATACAACCCGCGCTGCATATGTACAAANCC
TTAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6704#0      AGCATCCATCCAAATTCCCAAAAGAGGAAACTACGCTGCGCCACCGACTCTCTCGCCGCC 60
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GCACCCTCCTCCCTCCCTCCCTCGCTCGCCTCCGCCGCCGCCTCCGCTGCCTCTCCGGTG 120
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GGGGCCATGGCGAGCGCGGCGCCGCTGCCCCCCACGCCGCCGCCATCGCAGCAGCAGCAG 180
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      CCGCAGCCGCAGGGCAAGGAGCAGCAGCAGCAGATGGCGGTGGCGATGAACGCGCGCCGC 240
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      CTGGTGATGATCGGGGACCGCCTCAGGACCCACTTCCGCGGCGGCGGCGGGACCGTCCTC 300
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GAGCCGCCCGACCTCGCGCACCTCGTCTACGCCTTCGCCAGAGGGATCGATTTCGCTCTT 360
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      TCTAGCGGCGATGTTCCTACCGTGGCCAGTGAAATACCCAGCATTTTGAAGAAGGTGTAT 420
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      CTGGTAGGAAAAGATCAATTTCTGCAATCTTCTGTTATGGTGCTAATGATATCATGCAAG 480
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      AATGCTTGTTCTGAAAAATGGTTTCAACCCACAGATTGTACTGAAATTCTCAGGATGGCT 540
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      AATGAGCTCTCTGGCAAATTCTGCACGCCTGTCAGCCAGCCAGATAATGACAGCACTGTG 600
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      ATCCAAATTATTTCAACAATAATGCCAAGGTACTATCCTCAATTGAAGTTTGAACGTCTA 660
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GTCACTTCGCTGGAAGCAAAGGTTGGATATGATGTTTTAATGGCCGATTTTTTCATCCAT 720
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      AAGAATGTGCCTCGAGAGGAAAAGATTAATCTAATTGTTGTGCAAAAGGAAGACTTAAAT 780
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GCCTCATCATGTATTGCAAACCCGCCACATGTGAGCTTTTTAGTCAATGGAAAAGGCGTG 840
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GACAAGAGGACAAATGTTTCAATGGAAACAGGACCCCAGTTCCCCACTGATATTACTAGG 900
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      ATGCTCAAATACGGGGCAAACATCATCCAAGCTATAGGATATTTTAATGCTAACTATATC 960
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      ATAGCTGTTGCATTTCTGAATAAATTGGAGTCCTTTGACGCTCCAAACCTAAATGATTAT 1020
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GCACAACCAGTCGCTGCTGATCCTCCTGATTCTGATTTACTCGAAGGGCCATCTAGAGTT 1080
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      TCCCTGAAGTGCCCCATAAGTTTTAGGCGCATAAAAACTCCCATCAAAGGGCGCCTATGC 1140
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      AAACACTATCAGTGTTTTGATTATGATAATTACATGGAGTTGAACTTGAGGAAGCCGACT 1200
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      TGGCGCTGTCCATTTTGTAATACACCTTCAAACTTCACTGACCTACGGATTGATCAAAAG 1260
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      ATGGTCAAGATATTACAAGAGACTGGAGAAGATACTATTGATGTCCTTGTGTTTGCTGAT 1320
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GGATCTTGGAAAGCCATTTCAACTAATGATGAGAGATCTGATAGACATTCCAGTGACGTC 1380
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      ATTCAGCAGAGTAGAGATACTATGGACACTGATGCGACTGCTGATGATGTCATAGATCTG 1440
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      ATAAATGAAGACAATGATGGTGATGTGCCAATGAGTTTTACCTCTGCATCAGAAGATGTG 1500
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      AAGCCTTTCTTGAATTGTCAGGATCTATCTGTGGCAGACTATCTTTCGGATTTGCCTATG 1560
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      AACACAGTTTCGCAGGCAGAAGATCTATATGCAGGCGGTGCAAGCCGTGGAAACAATGAA 1620
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      CGTGGAAATGCCACTTCAACTTCTGGCCAAAATTCATCACTGCCTTCTACTGGCGGTCTG 1680
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GGCTCTAGTTCATTCGGGACTTTGGAGTCTATTCTGCCTCATAACATTCTGCACCCTGTT 1740
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      ATCACAGATGCAGTCTCTCCTTCTCTTGATACCTCTAATTCTGTAGTTCTGAGACAGCAT 1800
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GTAGCACAAGGAACACGTTCTGATATTGTGCCGTCGCAACCACGAATAGATCCACAGCTT 1860
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      AGATTAGAAATTGCAAGACCTCCTATACCAAGGAATGTCGCGAGAGAACCTACAGGAATT 1920
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      CAGGCTCTGCCAGTGCAACCACAGAGAGTGCGACCAAATATCTACAATTGTCCACCTCCT 1980
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      TTCCCACAATCCAGTCCAGCTTCAGCATATCAAGTACATCAGGTGACAAACGCAGATAGT 2040
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GTCATTACTGCTATGAGCACTGGTATTGGATCACTATCAAGGGCTCCAGATGCTGCTACG 2100
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      TTATTGCAACACCAGTCAACACAGCAGGAGATTCGAGCCACGCAAAACTATCATCAAGGC 2160
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      CAGTTCATTGGGCTTACTGCTCCTCAAAATTTCATGGGTACAAGACCGCCGCCAGGAGTC 2220
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      CCAGGACAGGCTATAGGTGCTAATGCCCATGGAGCTCCCCCCGCACAACAGTCCCATCAC 2280
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GTTCATCGGCTAGTGAGCAATCTAATGAATCAACTTGGACAAGCTACAGTGGCTCAACCT 2340
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      TCCACAGCTCCACAGGTCTTGCCATCTCAACCAGGCGGCACAAGTGCAGTCAACCCGCAG 2400
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      ATCCGCGGTCATCTTTTCCCTGCGCAACAACGCAGCCAAGCAATGAGACCACAAGCAGTG 2460
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      CCCCGACCTACAATTTCTCAGGCACCACCTCGTGCACAGTCTCCCTTCTTGCCAGCTACT 2520
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GCTCGGCCTCCGAGCACACCTCCCCCTATCGGAACTTCCGATGATCTTCAGGAGCTTCCT 2580
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GTGGATGAAAGCTGGCGTCCCACAGGGCAGATGAGAGGGAGCCTGACTGGTGAAGCTTAC 2640
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      AGCGTAGCGATTGGACGCTACAACCCCAGTGTGAACATTGCTGGTCAGCAGACAAGTCAT 2700
consensus_6704#1      ------------------------------------------------------------
                                                                                  

consensus_6704#0      GTGACAAGTCAGGCTCGGCCAGCTGGTCCGGATGCGCGCAGGTAATGGTAAGTCAGATAA 2760
consensus_6704#1      --------TCAGGNTCGCCCAGCTGTTCCGGATGCGCGCAGGTAATGGTAAGTCAGATAA 52
                              ***** *** ******* **********************************

consensus_6704#0      CTATGCATTGCTCATCAAGAAGATTTTGTTGGTGGCTCTGAACTCTGAATCTGCTAAGAT 2820
consensus_6704#1      CTATGCATTGCTCATCAAGAAGATTTTGTTGGTGGCTCTGAACTCTGAATCTGCTAAGAT 112
                      ************************************************************

consensus_6704#0      AGATGATCTCTCTCCCTAGCTATGTTAGATTGTCGTTAATCTGTTTAGCTTTAGGAGGTT 2880
consensus_6704#1      AGATGATCTCTCTCCCTAGCTATGTTAGATTGTCGTTAATCTGTTTAGCTTTAGGAGGTT 172
                      ************************************************************

consensus_6704#0      GCGAGAGCCTAGTGAGGGTGCTAACGCGCTAAACTGACTTGCAATGCTGGAACACCGTTT 2940
consensus_6704#1      GCGAGAGCCTAGTGAGGGTGCTAACGCGCTAAACTGACTTGCAATGCTGGAACACCGTTT 232
                      ************************************************************

consensus_6704#0      TGTAGCAGTTCCTGTGCTGCTCAACTTACAAGTTAGTTATACAACCCGCGCTGCATATGT 3000
consensus_6704#1      TGTAGCAGTTCCTGTGCTGCTCAACTTACAAGTTAGTTATACAACCCGCGCTGCATATGT 292
                      ************************************************************

consensus_6704#0      ACAAAGCCTTATTATGTTGTGTATTGCGGCTATCTTATTATACTCTTTGTGTTATTTGAT 3060
consensus_6704#1      ACAAANCCTTAAAAAAAAAAA--------------------------------------- 313
                      ***** *****  *                                              

consensus_6704#0      CATTTCTGTGCTGGATTCTGCC 3082
consensus_6704#1      ----------------------