These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6729#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1523 fasta sequence [TTAGATAAGCAAAACAGCCACCTAAGCCCACGCCGCGAAGTCGCCGCCACCGCCATGATCTCCGCGACGGCCACCGCCGCCTTCCTCGCCGCGGCGCCGGCCTCCTCCTCCTCCTGCACCACCCACCGCCGGCGCAGCGGCCTTCCCGCCATCTCCGCGTCCCTCGCAACCGCCTCCTCCACTGAGGAGCCGCTGCTGGTGCGGGCGGCGAGGGGCGAGGACGGGCTGCCGCGGCCGCCGGCGTGGATGATGCGGCAGGCCGGGCGGTACATGGCGGAGTACCAGGCGCTCGCCAAGCGCCACCCCTCGTTCCGGGAGCGGTCCGAGACGACCGAACTCATCGTCGAGATCACGCTGCAACCGTGGCGCGCCTTCGCGCCCGACGGCGTCATCCTGTTCTCGGACATACTCACGCCGCTGCCGGCCATTGGGGTGCCATTCGATATCTCCGACTCCAAGGGGCCTGTGATCCAGTCTCCCGTGAGGTCCGAGGAGCAGGTGAGGGAGCTCACCCCCATTGACTTCGAGAAGCTCCGGTTCGTCGGTGAGTCGCTCAAGATTCTACGCACTGAGATTGATGGACAAGCTGCTTTGCTAGGATTTGTGGGGGCCCCATGGACAATTGCAACTTATGTTGTTGAAGGGGGGATGACCAACACTTACACAAATATAAAGAGCATGTGCCACACAGCACCAAATGTGTTAAGGGGACTTTTGTCTCACCTTGCAGACGCCATATCTGAATACATTATTTACCAAGTAAACTCTGGGGCTCAATGTATACAAATATTTGATTCATGGGGTGGACAACTTCCACCTCATGTGTGGGAGCAGTGGTCAAAACCATATATCAAGCAGATTGTGAATAAGATTAAGATTGAATGCCCCAATGTACCACTTGTTCTCTATATAAATGGAAATGGAGGCTTGCTTGAGCGAATGACGGACACAGGAGTCGATGTTATTGGTCTTGACTGGACAGTGGATATGGCAGATGGAAGGAGACGCCTTGGTAACAAAATTAGTGTACAGGGGAATGTTGACCCAGCATTTCTATTTTCTCCATTACCAGTACTGACCGATGAAATTCATAGGGTTGTCAAATCAGCTGGTCCAAAAGGTCATATACTAAACTTGGGCCATGGTGTTCTTGTAAAAACACCAGAAGAAGCTGTAGCTCATTTCTTTGATGTCACGAGGAGCTTGAGATATGACACACTTTTCCAAGGTTGTGTTACTGAAGTTTTGGAGCCTGTTGCTTAACAATGGCCAATTGTCAGATATTTTTTTTAATCAGCTGATCCATGGTGTACCATCGTAGTTTTGTCTGCAAGCTATGTTGCTCCTTTTGTTGGCCATGTCTTTGTAGGAATATCACGATTCGTGACCAGGTCAATTCAATTTTATTCATTACTCTTAATAGCTGTATTCCTTCATCCATCCACAAAACAAAAACAAAAAGGCATGCCACCTGGTTTTACAAGAAAAGCCAGAGTAGGTTCAAGGTGTTTTGTCCATTTGTC] [+] EMBL AK072290 [TTAGATAAGCAAAACAGCCACCTAAGCCCACGCCGCGAAGTCGCCGCCACCGCCATGATCTCCGCGACGGCCACCGCCGCCTTCCTCGCCGCGGCGCCGGCCTCCTCCTCCTCCTGCACCACCCACCGCCGGCGCAGCGGCCTTCCCGCCATCTCCGCGTCCCTCGCAACCGCCTCCTCCACTGAGGAGCCGCTGCTGGTGCGGGCGGCGAGGGGCGAGGACGGGCTGCCGCGGCCGCCGGCGTGGATGATGCGGCAGGCCGGGCGGTACATGGCGGAGTACCAGGCGCTCGCCAAGCGCCACCCCTCGTTCCGGGAGCGGTCCGAGACGACCGAACTCATCGTCGAGATCACGCTGCAACCGTGGCGCGCCTTCGCGCCCGACGGCGTCATCCTGTTCTCGGACATACTCACGCCGCTGCCGGCCATTGGGGTGCCATTCGATATCTCCGACTCCAAGGGGCCTGTGATCCAGTCTCCCGTGAGGTCCGAGGAGCAGGTGAGGGAGCTCACCCCCATTGACTTCGAGAAGCTCCGGTTCGTCGGTGAGTCGCTCAAGATTCTACGCACTGAGATTGATGGACAAGCTGCTTTGCTAGGATTTGTGGGGGCCCCATGGACAATTGCAACTTATGTTGTTGAAGGGGGGATGACCAACACTTACACAAATATAAAGAGCATGTGCCACACAGCACCAAATGTGTTAAGGGGACTTTTGTCTCACCTTGCAGACGCCATATCTGAATACATTATTTACCAAGTAAACTCTGGGGCTCAATGTATACAAATATTTGATTCATGGGGTGGACAACTTCCACCTCATGTGTGGGAGCAGTGGTCAAAACCACATATCAAGCAGATTGTGAATAAGATTAAGATTGAATGCCCCAATGTACCACTTGTTCTCTATATAAATGGAAATGGAGGCTTGCTTGAGCGAATGACGGACACAGGAGTCGATGTTATTGGTCTTGACTGGACAGTGGATATGGCAGATGGAAGGAGACGCCTTGGTAACAAAATTAGTGTACAGGGGAATGTTGACCCAGCATTTCTATTTTCTCCATTACCAGTACTGACCGATGAAATTCATAGGGTTGTCAAATCAGCTGGTCCAAAAGGTCATATACTAAACTTGGGCCATGGTGTTCTTGTAAAAACACCAGAAGAAGCTGTAGCTCATTTCTTTGATGTCACGAGGAGCTTGAGATATGACACACTTTTCCAAGGTTGTGTTACTGAAGTTTTGGAGCCTGTTGCTTAACAATGGCCAATTGTCAGATATTTTTTTTAATCAGCTGATCCATGGTGTACCATCGTAGTTTTGTCTGCAAGCTATGTTGCTCCTTTTGTTGGCCATGTCTTTGTAGGAATATCACGATTCGTGACCAGGTCAATTCAATTTTATTCATTACTCTTAATAGCTGTATTCCTTCATCCATCCACAAAACAAAAACAAAAAGGCATGCCACCTGGTTTTACAAGAAAAGCCAGAGTAGGTTCAAGG ] [+] EMBL AK106203 [ TAGATAAGCAAAACAGCCACCTAAGCCCACGCCGCGAAGTCGCCGCCACCGCCATGATCTCCGCGACGGCCACCGCCGCCTTCCTCGCCGCGGCGCCGGCCTCCTCCTCCTCCTGCACCACCCACCGCCGGCGCAGCGGCCTTCCCGCCATCTCCGCGTCCCTCGCAACCGCCTCCTCCACTGAGGAGCCGCTGCTGGTGCGGGCGGCGAGGGGCGAGGACGGGCTGCCGCGGCCGCCGGCGTGGATGATGCGGCAGGCCGGGCGGTACATGGCGGAGTACCAGGCGCTCGCCAAGCGCCACCCCTCGTTCCGGGAGCGGTCCGAGACGACCGAACTCATCGTCGAGATCACGCTGCAACCGTGGCGCGCCTTCGCGCCCGACGGCGTCATCCTGTTCTCGGACATACTCACGCCGCTGCCGGCCATTGGGGTGCCATTCGATATCTCCGACTCCAAGGGGCCTGTGATCCAGTCTCCCGTGAGGTCCGAGGAGCAGGTGAGGGAGCTCACCCCCATTGACTTCGAGAAGCTCCGGTTCGTCGGTGAGTCGCTCAAGATTCTACGCACTGAGATTGATGGACAAGCTGCTTTGCTAGGATTTGTGGGGGCCCCATGGACAATTGCAACTTATGTTGTTGAAGGGGGGATGACCAACACTTACACAAATATAAAGAGCATGTGCCACACAGCACCAAATGTGTTAAGGGGACTTTTGTCTCACCTTGCAGACGCCATATCTGAATACATTATTTACCAAGTAAACTCTGGGGCTCAATGTATACAAATATTTGATTCATGGGGTGGACAACTTCCACCTCATGTGTGGGAGCAGTGGTCAAAACCATATATCAAGCAGATTGTGAATAAGATTAAGATTGAATGCCCCAATGTACCACTTGTTCTCTATATAAATGGAAATGGAGGCTTGCTTGAGCGAATGACGGACACAGGAGTCGATGTTATTGGTCTTGACTGGACAGTGGATATGGCAGATGGAAGGAGACGCCTTGGTAACAAAATTAGTGTACAGGGGAATGTTGACCCAGCATTTCTATTTTCTCCATTACCAGTACTGACCGATGAAATTCATAGGGTTGTCAAATCAGCTGGTCCAAAAGGTCATATACTAAACTTGGGCCATGGTGTTCTTGTAAAAACACCAGAAGAAGCTGTAGCTCATTTCTTTGATGTCACGAGGAGCTTGAGATATGACACACTTTTCCAAGGTTGTGTTACTGAAGTTTTGGAGCCTGTTGCTTAACAATGGCCAATTGTCAGATATTTTTTTTAATCAGCTGATCCATGGTGTACCATCGTAGTTTTGTCTGCAAGCTATGTTGCTCCTTTTGTTGGCCATGTCTTTGTAGGAATATCACGATTCGTGACCAGGTCAATTCAATTTTATTCATTACTCTTAATAGCTGTATTCCTTCATCCATCCACAAAACAAAAACAAAAAGGCATGCCACCTGGTTTTACAAGAAAAGCCAGAGTAGGTTCAAGGTGTTTTGTCCATTTGTC] [+] EMBL AK099135 [ AGATAAGCAAAACAGCCACCTAAGCCCACGCCGCGAAGTCGCCGCCACCGCCATGATCTCCGCGACGGCCACCGCCGCCTTCCTCGCCGCGGCGCCGGCCTCCTCCTCCTCCTGCACCACCCACCGCCGGCGCAGCGGCCTTCCCGCCATCTCCGCGTCCCTCGCAACCGCCTCCTCCACTGAGGAGCCGCTGCTGGTGCGGGCGGCGAGGGGCGAGGACGGGCTGCCGCGGCCGCCGGCGTGGATGATGCGGCAGGTCGGGCGGTACATGGCGGAGTACCAGGCGCTCGCCATGCGCCACCCCTCGTTCCGGGAGCGGTCCGAGACGACCGAACTCATCGTCGAGATCACGCTGCAACCGTGGCGCGCCTTCGCGCCCGACGGCGTCATCCTGTTCTCGGACATACTCACGCCGCTGCCGGCCATTGGGGTGCCATTCGATATCTCCGACTCCAAGGGGCCTGTGATCCAGTCTCCCGTGAGGTCCGAGGAGCAGGTGAGGGAGCTCACCCCCATTGACTTCGAGAAGCTCCGGTTCGTCGGTGAGTCGCTCAAGATTCTACGCACTGAGATTGATGGACAAGCTGCTTTGCTAGGATTTGTGGGGGCCCCATGGACAATTGCAACTTATGTTGTTGAAGGGGGGATGACCAACACTTACACAAATATAAAGAGCATGTGCCACACAGCACCAAATGTGTTAAGGGGACTTTTGTCTCACCTTGCAGACGCCATATCTGAATACATTATTTACCAAGTAAACTCTGGGGCTCAATGTATACAAATATTTGATTCATGGGGTGGACAACTTCCACCTCATGTGTGGGAGCAGTGGTCAAAACCATATATCAAGCAGATTGTGAATAAGATTAAGATTGAATGCCCCAATGTACCACTTGTTCTCTATATAAATGGAAATGGAGGCTTGCTTGAGCGAATGACGGACACAGGAGTCGATGTTATTGGTCTTGACTGGACAGTGGATATGGCAGATGGAAGGAGACGCCTTGGTAACAAAATTAGTGTACAGGGGAATGTTGACCCAGCATTTCTATTTTCTCCATTACCAGTACTGACCGATGAAATTCATAGGGTTGTCAAATCAGCTGGTCCAAAAGGTCATATACTAAACTTGGGCCATGGTGTTCTTGTAAAAACACCAGAAGAAGCTGTAGCTCATTTCTTTGATGTCACGAGGAGCTTGAGATATGACACACTTTTCCAAGGTTGTGTTACTGAAGTTTTGGAGCCTGTTGCTTAACAATGGCCAATTGTCAGATATTTTTTTTAATCAGCTGATCCATGGTGTACCATCGTAGTTTTGTCTGCAAGCTATGTTGCTCCTTTTGTTGGCCATGTCTTTGTAGGAATATCACGATTCGTGACCAGGTCAATTCAATTTTATTCATTACTCTTAATAGCTGTATTCCTTCATCCATCCACAAAACAAAAACAAAAAGGCATGCCACCTGGTTTTACAAGAAAAGCCAGAGTAGGTTCAAGG ] [+] EMBL AF074728 [ CAGCCACCTAAGCCCACGCCGCGAAGTCGCCGCCACCGCCATGATCTCCGCGACGGNCACCGCCGCCTTCCTCGCCGCGGCGCCGGCCTCCTCCTCCTCCTGCACCACCCACCGCCGGCGCAGCGGCCTTCCCGCCATCTCCGCGTCCCTCGCAACCGCCTCCTCCACTGAGGAGCCGCTGCTGGTGCGGGCGGCGAGGGGCGAGGACGGGCTGCCGCGGCCGCCGGCGTGGATGATGCGGCAGGCCGGGCGGTACATGGCGGAGTACCAGGCGCTCGCCAAGCGCCACCCCTCGTTCCGGGAGCGGTCCGAGACGACCGAACTCATCGTCGANATCACGCTGCAACCGTGGCGCGCCTTCGCGCCCGACGGCGTCATCCTGTTCTCGGACATACTCACGCCGCTGCCGGCCATTGGGGTGCCATTCGATATCTCCGACTCCAAGGGGCCTGTGATCCAGTCTCCCGTGAGGTCCGAGGAGCAGGTGAGGGAGCTCACCCCCATTGACTTCGANAA CTCCGGTTCGTCGGTGAGTCNCTCAAGATTCTACGCACTGAGATTGATGGACAAGCTGCTTTGCTAAGATTTGTGGGGG CCCATGGACAATTGCAACTTATGTTGTTGAAAGGGGGATGACCCACACTTACNCCAATNTNAAGA CATGTNNCACACAGCACCAAATGTTTTTAGGGGANTTTTGTCTC CCTTGCANACGCCATATCTGAATAC TTATTTA CAAGT AACTCTGGGG TCAATGTTTAC AATTTTTGA TCCTGGGGTGG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||