cluster # 6730

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Oryza sativa
cluster # 6730 cluster # 6730 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6730#0 length = 667 sequences # 4

consensusID : consensus_6730#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 667
fasta sequence

                              [AACGAACTGTTCCAGGAAAACCAAAGGCAAAAACGAGAGAAAAATAGCCACCACGAACCCTTCCTCCCCCACTGTCTCCCACTTTTTCACGTTTTCCGGCGAGCGCGGCGGCTAGCCATGGA-TGG-CGTCGGCGGCGGCGGCG-GCGGCATCCTGTCGTACGAGAAGCTGGAGGGGTACGCGATCTGGGTCGGGGCCAGCGTGGCGTCGGCCTTCTTCGCGTCCATGGAGAGCTGCTCCTGCATCCACGTCCACACCGCCGACGACGAGGGCGACGACTACGACCCCGAGGAGGCCAAGGACCGCCCCCTCATGCTCTCCCGCCCCCAGGCCCTCCCCGAGTACTACTACGACCGATCCGCCTCCTCCGCCTCCTTCGCCAAGATGTGATCTCATCTGCTGCTCCCTTCTCTGATCCGCTTCTTGATTAGTTTCTGCGTGTTCGTGTGATCTGTGGATGCGTGTGGTTCAATTGGCGTTCTTTCGGTGGGGGGCATTCAAGAAACCATCGTCCCTGCA-TTGTGCGGTGTGTTTGTGTTCATAAAGTGTGTGACTCGAATAGCTTATGGATTTGTGATTGTAATTCTCTTGAG--TTTTTTTTTTGGTTCATCTGTTCTGTACCTGATTCCTGATTTGGTCGTATAAAGCATCTTGTTCTATAAAAAAAAAA]

[+] EMBL AK063028             [AACGAACTGTTCCAGGAAAACCAAAGGCAAAAACGAGAGAAAAATAGCCACCACGAACCCTTCCTCCCCCACTGTCTCCCACTTTTTCACGTTTTCCGGCGAGCGCGGCGGCTAGCCATGGA TGG CGTCGGCGGCGGCGGCG GCGGCATCCTGTCGTACGAGAAGCTGGAGGGGTACGCGATCTGGGTCGGGGCCAGCGTGGCGTCGGCCTTCTTCGCGTCCATGGAGAGCTGCTCCTGCATCCACGTCCACACCGCCGACGACGAGGGCGACGACTACGACCCCGAGGAGGCCAAGGACCGCCCCCTCATGCTCTCCCGCCCCCAGGCCCTCCCCGAGTACTACTACGACCGATCCGCCTCCTCCGCCTCCTTCGCCAAGATGTGATCTCATCTGCTGCTCCCTTCTCTGATCCGCTTCTTGATTAGTTTCTGCGTGTTCGTGTGATCTGTGGATGCGTGTGGTTCAATTGGCGTTCTTTCGGTGGGGGGCATTCAAGAAACCATCGTCCCTGCA TTGTGCGGTGTGTTTGTGTTCATAAAGTGTGTGACTCGAATAGCTTATGGATTTGTGATTGTAATTCTCTTGAG  TTTTT                                                                        ]
[+] EMBL C74155               [                                   AGAGAAAAATAGCCACCACGAACCCTTCCTCCCCCACTGTCTCCCACTTTTTCACGTTTTCCGGCGAGCGCGGNGGCTAGCCATGGA TGG CGTCGGCGGNGGNGGNG GCGGNATCCTGTCGTACGAGAAGCTGGAGGGGTACGCGATCTGGGTCGGGGCCAGCGTGGCGTCGGCCTTCTTCGCGT CATGGAGAGCTGCTCCTGCATCCACGTCCACACCGNCGACGACGAGGGCGACGACTACGAC                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BI796718             [                                                                                                                      gGGATTGGCCTTCGCCGGC  CGGCGCGC GCATCCTGTCGTACGAGAAGCTGGAGGGGTACACGATCTGGGTCGGGGCCAGCGTGGCGTC GCCTTCTTCGCGTCCATGGAGAGCTGCTCCTGCATCCACGTCCACACCGCCGACGACGAGGGCGACGACTACGACCCCGAGGAGGCCAAGGACCGCCCCCTCATGCTCTCCCGCCCCCAGGCCCTCCCCGAGTACTACTACGACCGATCCGCCTCCTCCGCCTCCTTCGCC AGATGTGATCTCATCTGCTGCTCCCTTCTCTGATCCGCTTCTTGATTAGTTTCTGCGTGTTCGTGTGATCTGTGGATGCGTGTGGTTCAATTGGCGTTCTTTCGGTGGGGGGCATTCAAGAAACCATCGTCCCTGCACTTGTGCGGTGTGTTTGTGTTCATAAAGTGTGTGACTCGAATAGCTTATGGATTTGTGATTGTAATTCTCTTGAGTTTTTTTTTTTTGGTTCATCTGTTCTGTACCTGATTCCTGATTTGGTCGTATAAAGCATCTTGTTCTATAAAAAAAAAA]
[+] EMBL AU101398             [                                                                                                                                                           GTCGTACGAGAAGCTGGAGGGGTACGCGATCTGGGTCGGGGCCAGCGTGGCGTCGGCCTTCTTCGCGTCCATGGAGAGCTGCTCCTGCATCCACGTCCACACCGCCGACGACGAGGGCGACGACTACGACCCCGAGGAGGCCAAGGACCGCCCCCTCATGCTCTCCCGCCCCCAGGCCCTCCCCGAGTACTACTACGACCGATCCGCCTCCTCCGCCTCCTTCGCCAAGATGTGATCTCATCTGCTGCTCCCTTCTCTGATCCGCTTCTTGATTAGTTTCTGCGTGTTCGTGTGATCTGTGGATGCGTGTGGTTCAATTGGCGTTCTTTCGGTGGGGGGCATTCAAGAAACCATCGTCCCTGCA TTGTGCGGTGTGTTTGTGTTCATAAAGTGTGTGACTCGAATAGCTTATGGATTTGTGATTGTAATTCTCTTGAG  TTTTTTTTTTGGTTCATCTGTTCTGTACCTGATTCCTGATTTGGTCGTATAAAGCATCTTGTTCTATAAAAAAA   ]




>consensus_6730#0
AACGAACTGTTCCAGGAAAACCAAAGGCAAAAACGAGAGAAAAATAGCCACCACGAACCC
TTCCTCCCCCACTGTCTCCCACTTTTTCACGTTTTCCGGCGAGCGCGGCGGCTAGCCATG
GATGGCGTCGGCGGCGGCGGCGGCGGCATCCTGTCGTACGAGAAGCTGGAGGGGTACGCG
ATCTGGGTCGGGGCCAGCGTGGCGTCGGCCTTCTTCGCGTCCATGGAGAGCTGCTCCTGC
ATCCACGTCCACACCGCCGACGACGAGGGCGACGACTACGACCCCGAGGAGGCCAAGGAC
CGCCCCCTCATGCTCTCCCGCCCCCAGGCCCTCCCCGAGTACTACTACGACCGATCCGCC
TCCTCCGCCTCCTTCGCCAAGATGTGATCTCATCTGCTGCTCCCTTCTCTGATCCGCTTC
TTGATTAGTTTCTGCGTGTTCGTGTGATCTGTGGATGCGTGTGGTTCAATTGGCGTTCTT
TCGGTGGGGGGCATTCAAGAAACCATCGTCCCTGCATTGTGCGGTGTGTTTGTGTTCATA
AAGTGTGTGACTCGAATAGCTTATGGATTTGTGATTGTAATTCTCTTGAGTTTTTTTTTT
GGTTCATCTGTTCTGTACCTGATTCCTGATTTGGTCGTATAAAGCATCTTGTTCTATAAA
AAAAAAA

clustalw multiple alignements is not computed in this case