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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6739 cluster # 6739       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6739#0 length = 867 sequences # 4  

consensusID : consensus_6739#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 867
fasta sequence
                              [TTTTTGTTCAAATGAAGAGACCTCTTATTTAACTTATACGAAGGCCATTCAACTAGTTACGAGAAGATGTCTAGCTACAACAATACATCACATTTTTCTCTGCATGCTAGCTGCTACATTGGATTGTTGGCTACAGCTCGATACAACTTCCTCACCCTACTATATAT-ATACATATACAAGGCCGAGGAATCCAAGACAACACCTGAATAGCTCCTTCAGGGTTGGAACGGAACGACCG-ATATA-TTATCACTTCACTGGCCAATGAGCTCTACTAACAAAGCCTCCACTCCAGCACCGTGCATGTGGAATGGTTACATCTTATCCACCAAACACACAAGTTGACAGCAATTAGCAGCTCCTGATGACCAAGAATCTGATCTACTCTCATTGCTTCTCTACTCATGGAAATCCTCGTAAGGTGACTCTGATGATGAGTCCGAGTCGCTTTGATATGGCGTTGTTTCGCGTGGACTAGATGGCAGTGAATCTTGCAATGTCAGGCCTGTGTTCTTCTGCCCCCTGGGACGGAGCTTTCTTGTATGTCTCCGTAAGAGCTTCTTAGTGATTGTAAGCTGTCTAGCAAAAGGGAACTCGCCATCGCTGTCACTCCATTCGTCATGGCATTCATTGTCTCCATCTCCACGCACAGTCCGTAGCACAAACGCCTTTGCTTTACGGCGCTGTGAATTAAAGAGCCCTCTAATTGATGTGACAAATCCATCCCCTGCGCCTTCACCCGGCCTCTTCAGCCATGACACAGGAAACTGATCGGGCTTTCCGTGATGGTCACCGTCACTGTCACTTAAATTCAGATCATGATCAGGAACAGCTCCATCATGTGTTTCCCGAATTGTGGGCCTTAAACTT]

[-] EMBL BI813270             [TTTTTGTTCAAATGAAGAGACCTCTTATTTAACTTATACGAAGGCCATTCAACTAGTTACGAGAAGATGTCTAGCTACAACAATACATCACATTTTTCTCTGCATGCTAGCTGCTACATTGGATTGTTGGCTACAGCTCGATACAACTTCCTCACCCTACTATATATAATACATATACAAGGCCGAGGAATCCAAGACAACACCTGAATAGCTCCTTCAGGGTTGGAACGGAACGACCGAATATACTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL AK062837             [         AAATGAAGAGACCTCTTATTTAACTTATACGAAGGCCATTCAACTAGTTACGAGAAGATGTCTAGCTACAACAATACATCACATTTTTCTCTGCATGCTAGCTGCTACATTGGATTGTTGGCTACAGCTCGATACAACTTCCTCACCCTACTATATAT ATACATATACAAGGCCGAGGAATCCAAGACAACACCTGAATAGCTCCTTCAGGGTTGGAACGGAACGACCG ATATA TTATCACTTCACTGGCCAATGAGCTCTACTAACAAAGCCTCCACTCCAGCACCGTGCATGTGGAATGGTTACATCTTATCCACCAAACACACAAGTTGACAGCAATTAGCAGCTCCTGATGACCAAGAATCTGATCTACTCTCATTGCTTCTCTACTCATGGAAATCCTCGTAAGGTGACTCTGATGATGAGTCCGAGTCGCTTTGATATGGCGTTGTTTCGCGTGGACTAGATGGCAGTGAATCTTGCAATGTCAGGCCTGTGTTCTTCTGCCCCCTGGGACGGAGCTTTCTTGTATGTCTCCGTAAGAGCTTCTTAGTGATTGTAAGCTGTCTAGCAAAAGG                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB627917             [                                   ATACGAAGGCCATTCAACTAGTTACGAGAAGATGTCTAGCTACAACAATACATCACATTTTTCTCTGCATGCTAGCTGCTACATTGGATTGTTGGCTACAGCTCGATACAACTTCCTCACCCTACTATATAT ATACATATACAAGGCCGAGGAATCCAAGACAACACCTGAATAGCTCCTTCAGGGTTGGAACGGAACGACCG ATATA TTATCACTTCACTGGCCAATGAGCTCTACTAACAAAGCCTCCACTCCAGCACCGTGCATGTGGAATGGTTACATCTTATCCACCAAACACACAAGTTGACAGCAATTAGCAGCTCCTGATGATCAAGAATCTGATCTACTCTCATTGCTTCTCTACTCATGGAAATCCTCGTAAGGTGACTCTGATGATGAGTCCGAGTCGCTTTGATATGGCGTTGTTTCGCGTGGACTAGATGGCAGTGAATCTTGCAATGTCAGGCCTGTGTTCTTCTGCCCCCTGGGACGGAGCTTTCTTGTATGTCTCCGTAAGAGCTTCTTAGTGATTGTAAGCTGTCTAGCAAAAGGGAACTCGCCATCGCTGTCACTCCATTCGTCATGGCATTCATTGTCTCCATCTCCACGCACAGTCCGTAGCACAAACGCCTTTGCTTTACGGCGCTGTGAATTAAAGAGCCCTCTAATTGATGTGACAAATCCATCCCCTGCGCCTTCACCCGGCCTCTTCAGCCATGACACAGGAAACTGATCGGGCTTTCCGTGATGGTCACCGTCACTGTCACTTAAATTCAGATCATGATCAGGAACAGCTCCATCATGTGTTTCCCGAATTGTGGGCCTTAAACTT]
[-] EMBL CB000853             [                                                                                              TTTCTCTGCATGCTAGCTGCTACATTGGATTGTTGGCTACAGCTCGATACAACTTCCTCACCCTACTATATAT ATACATATACAAGGCCGAGGAATCCAAGACAACACCTGAATAGCTCCTTCAGGGTTGGAACGGAACGACCG ATATA TTATCACTTCACTGGCCAATGAGCTCTACTAACAAAGCCTCCACTCCAGCACCGTGCATGTGGAATGGTTACATCTTATCCACCAAACACACAAGTTGACAGCAATTAGCAGCTCCTGATGACCAAGAATCTGATCTACTCTCATTGCTTCTCTACTCATGGAAATCCTCGTAAGGTGACTCTGATGATGAGTCCGAGTCGCTTTGATATGGCGTTGTTTCGCGTGGACTAGATGGCAGTGAATCTTGCAATGTCAGGCCTGTGTTCTTCTGCCCCCTGGGACGGAGCTTTCTTGTATGTCTCCGTAAGAGCTTCTTAGTGATTGTAAGCTGTCTAGCAAAAGGGAATTCGCCATCGCTGTCACTCCATTCGTCATGGCATTCATTGTCTCCATCTCCACGCACAGTCCGTAGCACAAACGCCTTTGC                                                                                                                                                                                                    ]


>consensus_6739#0 TTTTTGTTCAAATGAAGAGACCTCTTATTTAACTTATACGAAGGCCATTCAACTAGTTAC GAGAAGATGTCTAGCTACAACAATACATCACATTTTTCTCTGCATGCTAGCTGCTACATT GGATTGTTGGCTACAGCTCGATACAACTTCCTCACCCTACTATATATATACATATACAAG GCCGAGGAATCCAAGACAACACCTGAATAGCTCCTTCAGGGTTGGAACGGAACGACCGAT ATATTATCACTTCACTGGCCAATGAGCTCTACTAACAAAGCCTCCACTCCAGCACCGTGC ATGTGGAATGGTTACATCTTATCCACCAAACACACAAGTTGACAGCAATTAGCAGCTCCT GATGACCAAGAATCTGATCTACTCTCATTGCTTCTCTACTCATGGAAATCCTCGTAAGGT GACTCTGATGATGAGTCCGAGTCGCTTTGATATGGCGTTGTTTCGCGTGGACTAGATGGC AGTGAATCTTGCAATGTCAGGCCTGTGTTCTTCTGCCCCCTGGGACGGAGCTTTCTTGTA TGTCTCCGTAAGAGCTTCTTAGTGATTGTAAGCTGTCTAGCAAAAGGGAACTCGCCATCG CTGTCACTCCATTCGTCATGGCATTCATTGTCTCCATCTCCACGCACAGTCCGTAGCACA AACGCCTTTGCTTTACGGCGCTGTGAATTAAAGAGCCCTCTAATTGATGTGACAAATCCA TCCCCTGCGCCTTCACCCGGCCTCTTCAGCCATGACACAGGAAACTGATCGGGCTTTCCG TGATGGTCACCGTCACTGTCACTTAAATTCAGATCATGATCAGGAACAGCTCCATCATGT GTTTCCCGAATTGTGGGCCTTAAACTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)