These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6815#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 891 fasta sequence [TTTTTTTTTTAAGTTAAAAGGACCAATATCCTTCTTAGTTTATATGAATTGCAGTCAAGTACCGTAGCAGAGATTTTCTTTACAGGTAAACACCACATTTTTACAGCAGCAAAATA-TGGATTTCCAAATTC-TT-GCTAGGACAATTAG-TT---GGTGCTACAACAAAAAC-TGCTCCA-GTAGCGCAAGCTCGGGAGAACGAGTAAA-TATAACT-T-GTTATATAACATACAAAAAC-T-GTATAA-GTAATTAAAGAAGCGCATATGAACCAACAATTTAAAGTCTCAAGG-CAGCAA-T--GCTTCAGGCCTGAAGTCAATCCGAAGCCCTAACACCCTCCTAACCTCTGCTGGTGTCAAAAGCCAGT-GTCAGATGCCC-GGCATTGTCACCCCAGAAATCCAGTATCTCCGATACCC-GCTCAAAATTCAGAATTGTTGACATCTGGGAAAGTCTTGAGAACTT-GTCTCGGACTGGTCTCTGTGACATTTCCGAGAAAGTGGTTGATCAGGGAGCGTACCTCCTTGTCGAGCTGGAGCCCACCAAGCGTGGCTGAACCTCTTCTGCATCATTATCACTTCAAGCCTCTTGACAATGAAGTCGATGATTAAGTGCGCCAAGGAATCATAGTTGTTTGATGTCATCACGGGCTGGAGCCATGCAACATTAGTATTAACTGTAAGGAGAAGCTTCTGCACCCATGGATCATTCACCTCATTTTCTCCATATTCGGCATCATCCAGCTCATAACTGACAGTGGCAACAGTGTCCAGAACAGGACGAACACGGGGTGCCACAGATGCCACTAAATGCTCCAGTCCAGAATGAAGGATCTTCTTGAAGGAAGCACTGATCTCACCTAGCTCAGATAAACAGGATTTGATTTTCTCTCGGTCAGCAGGAGCA] [-] EMBL BQ908800 [TTTTTTTTTTAAGTTAAAAGGACCAATATCCTTCTTAGTTTATATGAATTGCAGTCAAGTACCGTAGCAGAGATTTTCTTTACAGGTAAACACCACAATATTACAGCAGCAAAATAGTGGATTTCCAAATTC TTGGCTAGGACAATTAG TTGTGGGTGCTACAACAAAAACGTGGTCCAGGTAGCGCAAGCTCGGGAGAACGAGTAAA TATAACTGTGGTTATATAACATACAAAAACGTGGTATAA GTAATTAAAGAAGCGCATATGAACCAACAATTTAAAGTCTCAAGGNCAGCAA TTNGCTTCAGGCCTGAAGTCAATCCGAAGCCCTAACACCCTCCTAACCTCTGCTGGTGTCAAAAGCCAGTGGTCAGATGCCCGGGCATTGTCACCCCAGAAATCCAGTATCTCCGATACCCGGCTCAAAATTCAGAATTGTTGACATCTGGGAAAGTCTTGAGAACTTGGTCTCGGACTGGTCcgg ] [-] EMBL BM038837 [ tttttTTTTTACAGCAGCAAAATA TGGATTTCCAAATTC TT G TAGGACAATTAG TT GGTGCTACAACAAAAAC TG TCCA GTAGCGCAAGCTCGGGAGAACGAGTAAA TATAACTNT GTTATATAACATACAAAAAC T GTATAA GTAATTAAAGAAGCGCATATGAACCAACAATTTAAAGTCTCAAGG CAGCAA T GGTTCAGGCCTGAAGTCAATCCGAAGCCCTAACACCCTCCTAACCTCTGCTGGTGTCAAAAGCCAGT GTCAGATGCCC GGCATTGTCACCCCAGAAATCCAGTATCTCCGATACCC GCTCAAAATTCAGAATTGTTGACATCTGGGAAAGTCTTGAGAACTT GTCTCGGACTGGTCTCTGTGACATTTCCGAGAAAGTGGTTGATCAGGGAGCGTACCTCCTTGTCGAGCTGGAGCCCACCAAGCGTGGCTGAACCTCTTCTGCATCATTATCACTTCAAGCCTCTTGACAATGAAGTCGATGATTAAGTGCGCCA ] [-] EMBL BI812216 [ TTTTTACAGCAGCAAAATA TGGATTTCCAAATTC TT GCTAGGACAATTAG TT GGTGCTACAACAAAAAC TGCTCCA GTAGCGCAAGCTCGGGAGAACGAGTAAACTATAACT T GTTATATAACATACAAAAAC T GTATAACGTAATTAAAGAAGCGCATATGAACCAACAATTTAAAGTCTCAAGG CAGCAA T GCTTCAGGCCTGAAGT ] [+] EMBL CB633133 [ AAATA TGGATTTCCAAATTCTTT GCTAGGACAATTAGTTT GGTGCTACAACAAAAAC TGCTCCA GTAGCGCAAGCTCGGGAGAACGAGTAAA TATAACT T GTTATATAACATACAAAAAC T GTATAA GTAATTAAAGAAGCGCATATGAACCAACAATTTAAAGTCTCAAGG CAGCAATT GCTTCAGGCCTGAAGTCAATCCGAAGCCCTAACACCCTCCTAACCTCTGCTGGTGTCAAAAGCCA T GTCAGATGCCC GGCATTGTCACCCCAGAAATCCAGTATCTCCGATACCC GCTCAAAATTCAGAATTGTTGACATCTGGGAAAGTCTTGAGAACTT GTCTCGGACTGGTCTCTGTGACATTTCCGAGAAA TGGTTGATCAGGGAGCGTACCTCCTTGTCGAGCTGGAGCCCACCAAGC TGGCTGAACCTCTTCTGCATCATTATCACTTCAAGCCTCTTGACAATGAAGTCGATGATTAAGTGCACAAAGGAATCATAGTTGTTTGATGTCATCACGGGCTGGAGCCATGCAACATTAGTATTAACTGTAAGGAGAAGCTTCTGCACCCATGGATCATTCACCTCATTTTCTCCATATTCGGCATCATCCAGCTCATAACTGACAGTGGCAACAGTGTCCAGAACAGGACGAACACGGGGTGCCACAGATGCCACTAAATGCTCCAGTCCAGAATGAAGGATCTTCTTGAAGGAAGCACTGATCTCACCTAGCTCAGATAAACAGGATTTGATTTTCTCTCGGTCAGCAGGAGCA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||