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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6815 cluster # 6815       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6815#0 length = 891 sequences # 4  

consensusID : consensus_6815#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 891
fasta sequence
                              [TTTTTTTTTTAAGTTAAAAGGACCAATATCCTTCTTAGTTTATATGAATTGCAGTCAAGTACCGTAGCAGAGATTTTCTTTACAGGTAAACACCACATTTTTACAGCAGCAAAATA-TGGATTTCCAAATTC-TT-GCTAGGACAATTAG-TT---GGTGCTACAACAAAAAC-TGCTCCA-GTAGCGCAAGCTCGGGAGAACGAGTAAA-TATAACT-T-GTTATATAACATACAAAAAC-T-GTATAA-GTAATTAAAGAAGCGCATATGAACCAACAATTTAAAGTCTCAAGG-CAGCAA-T--GCTTCAGGCCTGAAGTCAATCCGAAGCCCTAACACCCTCCTAACCTCTGCTGGTGTCAAAAGCCAGT-GTCAGATGCCC-GGCATTGTCACCCCAGAAATCCAGTATCTCCGATACCC-GCTCAAAATTCAGAATTGTTGACATCTGGGAAAGTCTTGAGAACTT-GTCTCGGACTGGTCTCTGTGACATTTCCGAGAAAGTGGTTGATCAGGGAGCGTACCTCCTTGTCGAGCTGGAGCCCACCAAGCGTGGCTGAACCTCTTCTGCATCATTATCACTTCAAGCCTCTTGACAATGAAGTCGATGATTAAGTGCGCCAAGGAATCATAGTTGTTTGATGTCATCACGGGCTGGAGCCATGCAACATTAGTATTAACTGTAAGGAGAAGCTTCTGCACCCATGGATCATTCACCTCATTTTCTCCATATTCGGCATCATCCAGCTCATAACTGACAGTGGCAACAGTGTCCAGAACAGGACGAACACGGGGTGCCACAGATGCCACTAAATGCTCCAGTCCAGAATGAAGGATCTTCTTGAAGGAAGCACTGATCTCACCTAGCTCAGATAAACAGGATTTGATTTTCTCTCGGTCAGCAGGAGCA]

[-] EMBL BQ908800             [TTTTTTTTTTAAGTTAAAAGGACCAATATCCTTCTTAGTTTATATGAATTGCAGTCAAGTACCGTAGCAGAGATTTTCTTTACAGGTAAACACCACAATATTACAGCAGCAAAATAGTGGATTTCCAAATTC TTGGCTAGGACAATTAG TTGTGGGTGCTACAACAAAAACGTGGTCCAGGTAGCGCAAGCTCGGGAGAACGAGTAAA TATAACTGTGGTTATATAACATACAAAAACGTGGTATAA GTAATTAAAGAAGCGCATATGAACCAACAATTTAAAGTCTCAAGGNCAGCAA TTNGCTTCAGGCCTGAAGTCAATCCGAAGCCCTAACACCCTCCTAACCTCTGCTGGTGTCAAAAGCCAGTGGTCAGATGCCCGGGCATTGTCACCCCAGAAATCCAGTATCTCCGATACCCGGCTCAAAATTCAGAATTGTTGACATCTGGGAAAGTCTTGAGAACTTGGTCTCGGACTGGTCcgg                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL BM038837             [                                                                                            tttttTTTTTACAGCAGCAAAATA TGGATTTCCAAATTC TT G TAGGACAATTAG TT   GGTGCTACAACAAAAAC TG TCCA GTAGCGCAAGCTCGGGAGAACGAGTAAA TATAACTNT GTTATATAACATACAAAAAC T GTATAA GTAATTAAAGAAGCGCATATGAACCAACAATTTAAAGTCTCAAGG CAGCAA T  GGTTCAGGCCTGAAGTCAATCCGAAGCCCTAACACCCTCCTAACCTCTGCTGGTGTCAAAAGCCAGT GTCAGATGCCC GGCATTGTCACCCCAGAAATCCAGTATCTCCGATACCC GCTCAAAATTCAGAATTGTTGACATCTGGGAAAGTCTTGAGAACTT GTCTCGGACTGGTCTCTGTGACATTTCCGAGAAAGTGGTTGATCAGGGAGCGTACCTCCTTGTCGAGCTGGAGCCCACCAAGCGTGGCTGAACCTCTTCTGCATCATTATCACTTCAAGCCTCTTGACAATGAAGTCGATGATTAAGTGCGCCA                                                                                                                                                                                                                                                                                               ]
[-] EMBL BI812216             [                                                                                                 TTTTTACAGCAGCAAAATA TGGATTTCCAAATTC TT GCTAGGACAATTAG TT   GGTGCTACAACAAAAAC TGCTCCA GTAGCGCAAGCTCGGGAGAACGAGTAAACTATAACT T GTTATATAACATACAAAAAC T GTATAACGTAATTAAAGAAGCGCATATGAACCAACAATTTAAAGTCTCAAGG CAGCAA T  GCTTCAGGCCTGAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB633133             [                                                                                                               AAATA TGGATTTCCAAATTCTTT GCTAGGACAATTAGTTT   GGTGCTACAACAAAAAC TGCTCCA GTAGCGCAAGCTCGGGAGAACGAGTAAA TATAACT T GTTATATAACATACAAAAAC T GTATAA GTAATTAAAGAAGCGCATATGAACCAACAATTTAAAGTCTCAAGG CAGCAATT  GCTTCAGGCCTGAAGTCAATCCGAAGCCCTAACACCCTCCTAACCTCTGCTGGTGTCAAAAGCCA T GTCAGATGCCC GGCATTGTCACCCCAGAAATCCAGTATCTCCGATACCC GCTCAAAATTCAGAATTGTTGACATCTGGGAAAGTCTTGAGAACTT GTCTCGGACTGGTCTCTGTGACATTTCCGAGAAA TGGTTGATCAGGGAGCGTACCTCCTTGTCGAGCTGGAGCCCACCAAGC TGGCTGAACCTCTTCTGCATCATTATCACTTCAAGCCTCTTGACAATGAAGTCGATGATTAAGTGCACAAAGGAATCATAGTTGTTTGATGTCATCACGGGCTGGAGCCATGCAACATTAGTATTAACTGTAAGGAGAAGCTTCTGCACCCATGGATCATTCACCTCATTTTCTCCATATTCGGCATCATCCAGCTCATAACTGACAGTGGCAACAGTGTCCAGAACAGGACGAACACGGGGTGCCACAGATGCCACTAAATGCTCCAGTCCAGAATGAAGGATCTTCTTGAAGGAAGCACTGATCTCACCTAGCTCAGATAAACAGGATTTGATTTTCTCTCGGTCAGCAGGAGCA]


>consensus_6815#0 TTTTTTTTTTAAGTTAAAAGGACCAATATCCTTCTTAGTTTATATGAATTGCAGTCAAGT ACCGTAGCAGAGATTTTCTTTACAGGTAAACACCACATTTTTACAGCAGCAAAATATGGA TTTCCAAATTCTTGCTAGGACAATTAGTTGGTGCTACAACAAAAACTGCTCCAGTAGCGC AAGCTCGGGAGAACGAGTAAATATAACTTGTTATATAACATACAAAAACTGTATAAGTAA TTAAAGAAGCGCATATGAACCAACAATTTAAAGTCTCAAGGCAGCAATGCTTCAGGCCTG AAGTCAATCCGAAGCCCTAACACCCTCCTAACCTCTGCTGGTGTCAAAAGCCAGTGTCAG ATGCCCGGCATTGTCACCCCAGAAATCCAGTATCTCCGATACCCGCTCAAAATTCAGAAT TGTTGACATCTGGGAAAGTCTTGAGAACTTGTCTCGGACTGGTCTCTGTGACATTTCCGA GAAAGTGGTTGATCAGGGAGCGTACCTCCTTGTCGAGCTGGAGCCCACCAAGCGTGGCTG AACCTCTTCTGCATCATTATCACTTCAAGCCTCTTGACAATGAAGTCGATGATTAAGTGC GCCAAGGAATCATAGTTGTTTGATGTCATCACGGGCTGGAGCCATGCAACATTAGTATTA ACTGTAAGGAGAAGCTTCTGCACCCATGGATCATTCACCTCATTTTCTCCATATTCGGCA TCATCCAGCTCATAACTGACAGTGGCAACAGTGTCCAGAACAGGACGAACACGGGGTGCC ACAGATGCCACTAAATGCTCCAGTCCAGAATGAAGGATCTTCTTGAAGGAAGCACTGATC TCACCTAGCTCAGATAAACAGGATTTGATTTTCTCTCGGTCAGCAGGAGCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)