These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6816#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1368 fasta sequence [AGAGGTAGCTGGAGGAGAGCTGCTCGGCGAGGGCGAGGATGGCGATGGGCGACGCGAAGCCCTCGGCGGTGCACATCCCGATGCCCGCGCGCGACCGCGACCGCGACCGGGACCGCGAGCTGCTGCTCGTCCCGCCCGCCGCCGTCGCCACCTCCGCCTCCGCCTCCGCCTCGGCCGCGGGCCGCGACTCCGACTCCGACGACGAGTCCAAGCCTTCCTCCGCCTCCGCCGCCGCCGCCGCCGCGCAGACCGGCCGTGAGGCGTTTCACAAGGTTGTGCATAGCTGGGCGTCCAAGAAGTTCATGACCGGATGTGTAATCCTCTTTCCACTTGCAGTTACATTCTATATCACATGGTGGTTCTTTCGCTTTGTGGATGGGTTTTTCTCCCCAATATATGCTCATCTTGGAATCAATATATTTGGACTTGGTTTTGTAACTTCAATATCATTCATTTTTGTGGTTGGTGTGTTCATGTCATCTTGGCTGGGGGCATCTATTCTCGGTCTGGGAGAGTGGTTTATAAAGAGAATGCCATTTGTTCGCCATATTTACAATGCATCCAAGCAGATCAGTGCTG-CCATTT-CACCTGATCAGAACAAACATGCATTCAAGGAAGTGGTCATTATAAGGCATCCCAGAATTGGCGAATATGCATTTGGATTCATCACTTCGGAAGTTCTACTTCAGGATTATTCCAGTGAGGAACAAATGTACTGTGTATATGTACCAACCAACCATCTCTACATTGGGGACATATTTCTGGTCAACTCAAGTGATGTGATTAGACCAAACTTATCTGTTCGTGAAGGCAT-CGAGATTGTCGTTTCAGGAGGCATGTCAATGCCTCAAGTTCTATCCATAGTGGAAACGGAGCAGAACCAATGGAGCAGGATGAGATCTAGTCGAAGCTAAGATAACCCTCCTACGTGTGCCCAGATTTCGCTTGTAATCCCGTGTTTACTGGTTTCTGTAAGTACAAGGGTAGGATCCAATAGTAGAATGTACAGTTCTCCTGGCTGGGAATGCAAAATCACGCTGTGCACGCACTTAAGCTGTCACTCCATTCAAATGCGCGCGTGTGAACTTCGTTCCTTAGGTTGGAGCTTCATGAGGTAGAGTTTGTCCTGACGGTTTAGATGACACAGTTTATTCGCTTCATTTA-TTTGGTTAAGAGGGAGTTCTAGTTCTGATTGTCTGAAAAATCTTTTCCAGTTGCCACTGGCTTACTAATGACATGGTTAAGTGCATGTGTTTGTGTATGACAGTACGAG-ATTTGTGGCCTGAATGTTGTACNCATGNACCGAATGACTACCCTATGACCAACGNGCATTTGACTTGGAAGCTTAANAATGGGNGGGTAAAATTG] [+] EMBL AK071119 [AGAGGTAGCTGGAGGAGAGCTGCTCGGCGAGGGCGAGGATGGCGATGGGCGACGCGAAGCCCTCGGCGGTGCACATCCCGATGCCCGCGCGCGACCGCGACCGCGACCGGGACCGCGAGCTGCTGCTCGTCCCGCCCGCCGCCGTCGCCACCTCCGCCTCCGCCTCCGCCTCGGCCGCGGGCCGCGACTCCGACTCCGACGACGAGTCCAAGCCTTCCTCCGCCTCCGCCGCCGCCGCCGCCGCGCAGACCGGCCGTGAGGCGTTTCACAAGGTTGTGCATAGCTGGGCGTCCAAGAAGTTCATGACCGGATGTGTAATCCTCTTTCCACTTGCAGTTACATTCTATATCACATGGTGGTTCTTTCGCTTTGTGGATGGGTTTTTCTCCCCAATATATGCTCATCTTGGAATCAATATATTTGGACTTGGTTTTGTAACTTCAATATCATTCATTTTTGTGGTTGGTGTGTTCATGTCATCTTGGCTGGGGGCATCTATTCTCGGTCTGGGAGAGTGGTTTATAAAGAGAATGCCATTTGTTCGCCATATTTACAATGCATCCAAGCAGATCAGTGCTG CCATTT CACCTGATCAGAACAAACATGCATTCAAGGAAGTGGTCATTATAAGGCATCCCAGAATTGGCGAATATGCATTTGGATTCATCACTTCGGAAGTTCTACTTCAGGATTATTCCAGTGAGGAACAAATGTACTGTGTATATGTACCAACCAACCATCTCTACATTGGGGACATATTTCTGGTCAACTCAAGTGATGTGATTAGACCAAACTTATCTGTTCGTGAAGGCAT CGAGATTGTCGTTTCAGGAGGCATGTCAATGCCTCAAGTTCTATCCATAGTGGAAACGGAGCAGAACCAATGGAGCAGGATGAGATCTAGTCGAAGCTAAGATAACCCTCCTACGTGTGCCCAGATTTCGCTTGTAATCCCGTGTTTACTGGTTTCTGTAAGTACAAGGGTAGGATCCAATAGTAGAATGTACAGTTCTCCTGGCTGGGAATGCAAAATCACGCTGTGCACGCACTTAAGCTGTCACTCCATTCAAATGCGCGCGTGTGAACTTCGTTCCTTAGGTTGGAGCTTCATGAGGTAGAGTTTGTCCTGACGGTTTAGATGACACAGTTTATTCGCTTCATTTA TTTGGTTAAGAGGGAGTTCTAGTTCTGATTGTCTGAAAAATCTTTTCCAGTTGCCACTGGCTTACTAATGACATGGTTAAGTGCATGTGTTTGTGTATGACAGTACGAG ATTTGTGGCCTGAATGT ] [+] EMBL CA767510 [ GGTTTATAAAGAGAATGCCATTTGTTCGCCATATTTACAATGCATCCAAGCAGATCAGTGCTG CCATTT CACCTGATCAGAACAAACATGCATTCAAGGAAGTGGTCATTATAAGGCATCCCAGAATTGGCGAATATGCATTTGGATTCATCACTTCGGAAGTTCTACTTCAGGATTATTCCAGTGAGGAACAAATGTACTGTGTATATGTACCAACCAACCATCTCTACATTGGGGACATATTTCTGGTCAACTCAAGTGATGTGATTAGACCAAACTTATCTGTTCGTGAAGGCAT CGAGATTGTCGTTTCAGGAGGCATGTCAATGCCTCAAGTTCTATCCATAGTGGAAACGGAGCAGAACCAATGGAGCAGGATGAGATCTAGTCGAAGCTAAGATAACCCTCCTACGTGTGCCCAGATTTCGCTTGTAATCCCGTGTTTACTGGTTTCTGTAAGTACAAGGGTAGGATCCAATAGTAGAATGTACAGTTCTCCTGGCTGGGAATGCAAAATCACGCTGTGCACGCACTTAAGCTGTCACTCCATTCAAATGCGCGCGTGTGAACTTCGTTCCTTAGGTTGGAGCTTCATGAGGTAGAGTTTGTCCTGACGGTTTAGATGACACAGNTTATTCGCTTCATTTATTTTGGTTAAGANGGAGNTCTAGTTCTGATTGTCTGAAAAATCTTTTNCAGNTGNCACTGGCTTACTAATGACATGGNTAAGTGCATGNGNTTGNGGATGACAGTACGAGAATTTGNGGCCTGAATGTTGTACNCATGNACCGAATGACTACCCTATGACCAACGNGCATTTGACTTGGAAGCTTAANAATGGGNGGGTAAAATTG] [+] EMBL AU030028 [ cgGTGCTGCCCATTTCCACCTGATCAGAACAAACATGCATTCAAGGAAGTGGCCATTATAAGGCATCCCAGAATTGGCGAATATGCATTTGGATTCATCACTTCGGAAGTTCTACTTCAGGATTATTCCAGTGAGGAACAAATGTACTGTGTATATGTACCAACCAACCATCTCTACATTGGGGACATATTTCTGGTCAACTCAAGTGATGTGATTAGACCAAACTTATCTGTTCGTGAAGGCATCCGAGATTGTCGTTTCAGGAGGCATNTCAATGCCTCAAGTTCTATCCATAGTGGAAACGGAGCAGAACCAATGGAGCAGGATGAGATCTAGTCGAAGCTAAGATAACCCTCCTACGTGTGCCCAGATTTCGCTTGTAATCCCGTGTTTACTGGTTTCTGTAAGTACAAGGGTAGGATCCAATAGTAGAATGTACAGTTCTCCTGGCTGGGAATGCAAAATCACGCTGTGCACGCACTTAAGCTGTCACTCCATTCAAATGCGCGCGTGTGAACTTCGTTCCTTAGGTTGGAGCTTCATGAGGTAGAGTTTGTCCTGACGGTTTAGATGACACAGTTTATTCGCTTCATTTA TTTGGTTAAGAGGGAGTTCTAGTTCTGATTGTCTGAAAAAaaaaa ] [+] EMBL AU030027 [ TTT CACCTGATCAGAACAAACATGCATTCAAGGAAGTGGTCATTATAAGGCATCCCAGAATTGGCGAATATGCATTTGGATTCATCACTTCGGAAGTTCTACTTCAGGATTATTCCAGTGAGGAACAAATGTACTGTGTATATGTACCAACCAACCATCTCTACATTGGGGACATATTTCTGGTCAACTCAAGTGATGTGATTAGACCAAACTTATCTGTTCGTGAAGGCAT CGAGATTGTCGTTTCAGGAGGCATGTC ATGCTCCAAGTTCTATCCATAGTGG NACGGAGCAG ACC ATGGAGCAGGATGA ATCTA TCG AGCTAAGAT ANCCTCCTACGNGTGCCaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||