cluster # 6821

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Oryza sativa
cluster # 6821 cluster # 6821 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6821#0 length = 730 sequences # 4

consensusID : consensus_6821#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 730
fasta sequence

                              [AGAGCAATACCATTACAGGTAGAACTTTATTACTAAAGACAAAATTATTCTTGTAGTATGATGCTAGTACTACACGTATGTACTACTAGTATATATGGAGAGATATGTCATGGTACACACAGTGGCAGTGGCAGAATGTTCAATTTCTCCACAGAGACGACCAAAGGGATAGATGAGAATATACACGCACATTCCACAGGCACGGAATGAAAGAAAAGAGAAGGAAAAGAGGAAAGGCAGAAGAAACTGCAGGCGGGCAGCAAGATAGGAATCTCATCAAGAAAAAAAAAAGAGAAAAGAATGGTGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAGTTGTTCTTCTTCTCTTGCGCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCGCCGGGCGGATGGCTGCCTGTCTGCGTCTGCGTCTACCACCGCCCGGGACTGGACTGGACCTCGCGCGCGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAAAACTCCCCGTATGTTATGATGCTTCTGCTGCACGTACTTGGTCCAGATGACGAGTGAATTGGCAAGGACGGACGGACGGACGGAAGGGAACGGAATGGGTAGGTACGGTAGTAGTTGTGTTCAGAGGAGGACGTCGGACTTGGCGGGTAGTCGCTTGTAGAAGTTGAAGGGGACGGACGGCTGCTTGCTGCGGAAGCGCGGATGGCGGAGGA]

[+] EMBL CB651732             [AGAGCAATACCATTACAGGTAGAACTTTATTACTAAAGACAAAATTATTCTTGTAGTATGATGCTAGTACTACACGTATGTACTACTAGTATATATGGAGAGATATGTCATGGTACACACAGTGGCAGTGGCAGAATGTTCAATTTCTCCACAGAGACGACCAAAGGGATAGATGAGAATATACACGCACATTCCACAGGCACGGAATGAAAGAAAAGAGAAGGAAAAGAGGAAAGGCAGAAGAAACTGCAGGCGGGCAGCAAGATAGGAATCTCATCAAG  AAAAAAAAGAGAAAAGAATGGTGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAGTTGTTCTTCTTCTCTTGCGCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCGCCGGGCGGATGGCTGCCTGTCTGCGTCTGCGTCTACCACCGCCCGGGACTGGACTGGACCTCGCGCGCGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAAAACTCCCCGTATGTTATGATGCTTCTGCTGCACGTACTTGGTCCAGATGACGAGTGAATTGGCAAGGACGGACGGACGGACGGAAGGGAACGGAATGGGTAGGTACGGTAGTAGTTGTGTTCAGAGGAGGACGTCGGACTTGGCGGGTAGTCGCTTGTAGAAGTTGAAGGGGACGGACGGCTGCTTGCTGCGGAAGCGCGGATGGCGGAGGA]
[-] EMBL AU174349             [                                                                                                                           tttttTGGCAGAATGTTCAATTTCTCCACAGAGACGACCAAAGGGATAGATGAGAATATACACGCACATTCCACAGGCACGGAATGAAAGAAAAGAGAAGGAAAAGAGGAAAGGCAGAAGAAACTGCAGGCGGGCAGCAAGATAGGAATCTCATCAAGAAAAAAAAAAGAGAAAAGAATGGTGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAGTTGTTCTTCTTCTCTTGCGCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCGCCGGGCGGATGGCTGCCTGTCTGCGTCTGCGTCTACCACCGCCCGGGACTGGACTGGACCTCGCGCGCGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAAAACTCCCCGTATGTTATGATGCTTCTGCTGCACGTACTTGGn                                                                                                                                                                          ]
[-] EMBL AU174348             [                                                                                                                                                                                      ACACGCACATTCCACAGGCACGGAATGAAAGAAAAGAGAAGGAAAAGAGGAAAGGCAGAAGAAACTGCAGGCGGGCAGCAAGATAGGAATCTCATCAAGAAAAAAAAAAGAGAAAAGAATGGTGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAGTTGTTCTTCTTCTCTTGCGCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCGCCGGGCGGATGGCTGCCTGTCTGCGTCTGCGTCTACCACCGCCCGGGACTGGACTGGACCTCGCGCGCGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAAAACTCCCCGTATGTTATGATGCTTCTGCTGCACGTACTTGGTCCAGATGACGAGTGAATTGGCAAGGACGGACGGACGGACGGAAGGGAACGGAATGG                                                                                                                  ]
[-] EMBL D42670               [                                                                                                                                                                                                                                                                                                                TGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAGTTGTTCTTCNTCTCTTG GCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCG CGNGCGGATGGCTGCCTGTCTGCGTCTG GTCTACCACCGCCCGGGACTGGACTGGACCT  CGNGNGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAA                                                                                                                                                                                                                    ]




>consensus_6821#0
AGAGCAATACCATTACAGGTAGAACTTTATTACTAAAGACAAAATTATTCTTGTAGTATG
ATGCTAGTACTACACGTATGTACTACTAGTATATATGGAGAGATATGTCATGGTACACAC
AGTGGCAGTGGCAGAATGTTCAATTTCTCCACAGAGACGACCAAAGGGATAGATGAGAAT
ATACACGCACATTCCACAGGCACGGAATGAAAGAAAAGAGAAGGAAAAGAGGAAAGGCAG
AAGAAACTGCAGGCGGGCAGCAAGATAGGAATCTCATCAAGAAAAAAAAAAGAGAAAAGA
ATGGTGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAG
TTGTTCTTCTTCTCTTGCGCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCGCCGGGC
GGATGGCTGCCTGTCTGCGTCTGCGTCTACCACCGCCCGGGACTGGACTGGACCTCGCGC
GCGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAAAACTCCCCGTATGTTATGATGC
TTCTGCTGCACGTACTTGGTCCAGATGACGAGTGAATTGGCAAGGACGGACGGACGGACG
GAAGGGAACGGAATGGGTAGGTACGGTAGTAGTTGTGTTCAGAGGAGGACGTCGGACTTG
GCGGGTAGTCGCTTGTAGAAGTTGAAGGGGACGGACGGCTGCTTGCTGCGGAAGCGCGGA
TGGCGGAGGA

clustalw multiple alignements is not computed in this case