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Oryza sativa
cluster # 6826 cluster # 6826       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6826#0 length = 1075 sequences # 4  
consensusID : consensus_6826#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1075
fasta sequence 
                              [CTCTTTCTCTCTCTCCATCGGGTGGACGACGAGACGACGACGGCGGCGAAGGAGGAGGAGGAGGAGGAGAAGAGCGAGGAAACCCGTCTGCGCGGCCACGCGACGCTAGGGGGCCGAGAGCCTGCAGCGGTCGCCGCGGCTGGAGCATGAGGTGGCCGCGGCCCATCTCGCCTGGCCGCCGGCTCCTCCCGGTCGTCGTGCTGTTCGTCGCCCTCTGCTCGATCCCTGGGATTTTTTCTCAGAGGCTCGTCACACTTGACAGCATTGATATATTTACTACTCATGAGTGGTTCCCGAGTAAGCCAACTGTGTATTTCCTTTGCGATGGTGAGGACAAGGTGTATTTGCCTGACGTGAAGGATGCAAACAATATATACACCTTTAAGGGCGAAGAATCATGGCAGCCCTTAACAGAACTTCCAGAAAAGAAATGCAAGAGGTGTGGTTTGTACGAAGAGGATACATTTAAACATGATTTGTATGATGAATGGGAGCTGTGTTCTAGTGATTTCAAAAAAGGAAAATACACCCATTTCAAGGAGGGCCAGTTCAATGCTACTTTCCTATGCCCAAATTGCACTGCCTCTGCGGGTGATTCTGCAAACCATGATTCTAGCTCAGAAGTGGAAACTAAAAAGTCATCCGTTACTGTAATCATAATAGTCAGT-GTTCTTTC-TTC-TGTCCTTGTTATCATTG-CATTATTTGGGGGCTACAA-GTACTGG-CTGAAGAAGAAGAGGGAGCGGGATCA-GTTACGATTCCTC-AACTCTTCGAAGAGGGAGACGACATTGAAGACGAACTGGGCCTT-GCAATGAACTCTGAACAGCA-CATATAGTTAGGTTCCTGAAGCTCTGTGGAGAGGGAGGTGACACTGAAGATGAGCTGCCCCTGTCAAGGAACTCTTTCCAAAACATCACGTACAGTCTGACCTGGGACCTTTTCAGATGGATTCTCCATGTCATGTATAAATGGACAGCTTTAGCTTAGAAATTTTTGTTATGTAGTGATACACCATAGTTTCTGAATGAATGATTGACAAAAAAATGTTCTTC-ATTCATAGAAGTTTTCCCCAGAAAAA]

[+] EMBL AK101658             [CTCTTTCTCTCTCTCCATCGGGTGGACGACGAGACGACGACGGCGGCGAAGGAGGAGGAGGAGGAGGAGAAGAGCGAGGAAACCCGTCTGCGCGGCCACGCGACGCTAGGGGGCCGAGAGCCTGCAGCGGTCGCCGCGGCTGGAGCATGAGGTGGCCGCGGCCCATCTCGCCTGGCCGCCGGCTCCTCCCGGTCGTCGTGCTGTTCGTCGCCCTCTGCTCGATCCCTGGGATTTTTTCTCAGAGGCTCGTCACACTTGACAGCATTGATATATTTACTACTCATGAGTGGTTCCCGAGTAAGCCAACTGTGTATTTCCTTTGCGATGGTGAGGACAAGGTGTATTTGCCTGACGTGAAGGATGCAAACAATATATACACCTTTAAGGGCGAAGAATCATGGCAGCCCTTAACAGAACTTCCAGAAAAGAAATGCAAGAGGTGTGGTTTGTACGAAGAGGATACATTTAAACATGATTTGTATGATGAATGGGAGCTGTGTTCTAGTGATTTCAAAAAAGGAAAATACACCCATTTCAAGGAGGGCCAGTTCAATGCTACTTTCCTATGCCCAAATTGCACTGCCTCTGCGGGTGATTCTGCAAACCATGATTCTAGCTCAGAAGTGGAAACTAAAAAGTCATCCGTTACTGTAATCATAATAGTCAGT GTTCTTTC TTC TGTCCTTGTTATCATTG CATTATTTGGGGGCTACAA GTACTGG CTGAAGAAGAAGAGGGAGCGGGATCA GTTACGATTCCTCAAACTCTTCGAAGAGGGAGACGACATTGAAGACGAACTGGGCCTTGGCAATGAACTCTGAACAGCA CATATAGTTAGGTTCCTGAAGCTCTGTGGAGAGGGAGGTGACACTGAAGATGAGCTGCCCCTGGCAAGGAACTCTTTCCAAAACATCACGTACAGTCTGACCTGGGACCTTTTCAGATGGATTCTCCATGTCATGTATAAATGGACAGCTTTAGCTTAGAAATTTTTGTTATGTAGTGATACACCATAGTTTCTGAATGAATGATTGACAAAAAAATGT                                ]
[+] EMBL CA999248             [                                                                              GAAACCCGTCTGCGCGGCCACGCGACGCTAGGGGGCCGAGAGCCTGCAGCGGTCGCCGCGGCTGGAGCATGAGGTGGCCGCGGCCCATCTCGCCTGGCCGCCGGCTCCTCCCGGTCGTCGTGCTGTTCGTCGCCCTCTGCTCGATCCCTGGGATTTTTTCTCAGAGGCTCGTCACACTTGACAGCATTGATATATTTACTACTCATGAGTGGTTCCCGAGTAAGCCAACTGTGTATTTCCTTTGCAATGGTGAGGACAAGGTGTATTTGCCTGACGTGAAGGATGCAAACAATATATACACCTTTAAGGGCGAAGAATCATGGCAGCCCTTAACAGAACTTCCAGAAAAGAAATGCAAGAGGTGTGGTTTGTACGAAGAGGATACATTTAAACATGATTTGTATGATGAATGGGAGCTGTGTTCTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BI812032             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGTTACTGTAATCATAATAGTCAGTGGTTCTTTCGTTCTTGTCCTTGTTATCATTGCCATTATTT GGGGCTACAAGGTACTGGCCTGAAGAAGAAGAGGGAGCGGGATCACGTTACGATTCCTC AACTCTTCGAAGAGGGAGACGACATTGAAGACGAACTGGGCCTT GCAATGAACTCTGAACAGCACCATATAGTTAGGTTCCTGAAGCTCTGTGGAGAGGGAGGTGACACTGAAGATGAGCTGCCCCTGTCAAGGAACTCTTTCCCAAACATCACGTACAGTCTGACCTGGGACCTTTTCAGATGGATTCTCCATGTCATGTATAAATGGACAGCTTTAGCTTAGAAATTTTTGTTATGTAGTGATACACCATAGTTTCTGAATGAATGATTGACAAAAAAATGTTCTTCAATTCATAGAAGTTTTCCCCAGAAAAA]
[+] EMBL BI812160             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           agtAAGAAGAGGGAGCGGGATCA GTTACGATTCCTC AACTCTTCGAAGAGGGAGACGACATTGAAGACGAACTGGCCCTT GCAATGAACTCTGAACAGCA CATATAGTTAGGTTCCTGAAGCTCTGTGGAGAGGGAGGTGACACTGAAGATGAGCTGCCCCTGTCAAGGAACTCTTTCCAAAACATCACGTACAGTCTGACCTGGGACCTTTTCAGATGGATTCTCCATGTCATGTATAAATGGACAGCTTTAGCTTAGAAATTTTTGTTATGTAGTGATACACCATAGTTTCTGAATGAATGATTGAC AAAAAATGTTCTTC ATTCATAGAAGTTTTCCCCAGAAAAA]




>consensus_6826#0
CTCTTTCTCTCTCTCCATCGGGTGGACGACGAGACGACGACGGCGGCGAAGGAGGAGGAG
GAGGAGGAGAAGAGCGAGGAAACCCGTCTGCGCGGCCACGCGACGCTAGGGGGCCGAGAG
CCTGCAGCGGTCGCCGCGGCTGGAGCATGAGGTGGCCGCGGCCCATCTCGCCTGGCCGCC
GGCTCCTCCCGGTCGTCGTGCTGTTCGTCGCCCTCTGCTCGATCCCTGGGATTTTTTCTC
AGAGGCTCGTCACACTTGACAGCATTGATATATTTACTACTCATGAGTGGTTCCCGAGTA
AGCCAACTGTGTATTTCCTTTGCGATGGTGAGGACAAGGTGTATTTGCCTGACGTGAAGG
ATGCAAACAATATATACACCTTTAAGGGCGAAGAATCATGGCAGCCCTTAACAGAACTTC
CAGAAAAGAAATGCAAGAGGTGTGGTTTGTACGAAGAGGATACATTTAAACATGATTTGT
ATGATGAATGGGAGCTGTGTTCTAGTGATTTCAAAAAAGGAAAATACACCCATTTCAAGG
AGGGCCAGTTCAATGCTACTTTCCTATGCCCAAATTGCACTGCCTCTGCGGGTGATTCTG
CAAACCATGATTCTAGCTCAGAAGTGGAAACTAAAAAGTCATCCGTTACTGTAATCATAA
TAGTCAGTGTTCTTTCTTCTGTCCTTGTTATCATTGCATTATTTGGGGGCTACAAGTACT
GGCTGAAGAAGAAGAGGGAGCGGGATCAGTTACGATTCCTCAACTCTTCGAAGAGGGAGA
CGACATTGAAGACGAACTGGGCCTTGCAATGAACTCTGAACAGCACATATAGTTAGGTTC
CTGAAGCTCTGTGGAGAGGGAGGTGACACTGAAGATGAGCTGCCCCTGTCAAGGAACTCT
TTCCAAAACATCACGTACAGTCTGACCTGGGACCTTTTCAGATGGATTCTCCATGTCATG
TATAAATGGACAGCTTTAGCTTAGAAATTTTTGTTATGTAGTGATACACCATAGTTTCTG
AATGAATGATTGACAAAAAAATGTTCTTCATTCATAGAAGTTTTCCCCAGAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)