These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6833#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1561 fasta sequence [ACCTCCCGCGGCGGGCACCTCTGCCCCTCACCGCCTCCGTCTCGCCGCCGACGATGCTGCCAGGTCGCCGCCGCGGCGGGTGGAATCGGCCGCCGCGCCGTCTCCCTCGCCGGCGTCGCCTCCTGGCTCACCGCCACTGCTGCCGGCCGGGCAGACGCGAGCCCGTTTGACAAATACGTCAAGAAGAAGAAGCTGGAGCCATTGGAGACCTACGTTCCGGCAGTACTGTTGACTCAGGACCAATTCAGGGATCTAGAGAAGTCATTAGAATTTGAGAAGCCAAGATATGATGAGAGCAGATCATTACTTCGTTCTGGTCCAGCATCTTCTCTGCGTATCAATATTCGAGCAGTAAGATACTGATCGTATGGTGAATGTGATTCTGGTTCTCAAGTTAACGAGATACCAAGGCAATAAATATGGGCGTTTGGCTCCATTATATTGGTGGTGTGGCCCACTTTGATACTCTCAATTGAAACTAGCTAGTGGAGTCGCGCATTCGCGCAACCATGACCTGTATGTCAAAACCAGTAGTATATGAGCCCATTTACAGTATGCACTAATCGCACAACTAAAATAAATTTATGTCAAGTTTTAGCTGGTCCATATGTAACAAAGAACACATTATAAATGAGAGTCCTGAATAAAACTGTAGCCTAAACAATAGAGGTTCATTTGTGCATGAAATTAAATTCCAGTCCAAACGATAATGTTGGTATGGGGGTAAACTGTAGGCACATTTCTGCTACCTGTGCTTTATCTCCTGACTAATGTTTGATCATACGGTTCACATTTGTTCTCCTTATTTTGCCCTTCTCTAGTTTGTCTTGTTGCATACGTGGTCCAATGAGGTGCTTTGAAAACATTTTGTTTTCACTACTTTAGATATGGCATTAATATTCCTATAGACTGTCTGTTTTAAACATTCAGGAGTTGAGATTAATCAGCAAGTTTCAACTGCCCTTTTTTTTCCTTAAACATCAAGATATTTTACTTGTTCAGATTATGCCCATTGCCATAACTGGTTCAAACATCCAGAGAATGTGTATTCGATCTAATGATGTCAGATTATGTGTGCTTAAAACAAACTAAGCCCACTAGATATGCATTGAATTCACCTGAAGAAGAAAACAAAATGCAGGTGGCGCAGTATGCTTCTAGCAGTGGTCAAGGCAAAGCTGCCTCTGATGCAGTGGACGAATGCTTACGAGCATTGGAAGATCTTGACTCA-CTGCTACTACAAGCATCA-CGGAACAACCCATCAGCGTCTGTCGATGT-CATGAGGAGCAAAATCAGTGTAGCCCTTGGAGCTTTAGACAACCTCCTTCAGACTGTGCCATCAGCAGTGCTGGACAAAGGGAAGGCCATTGCCAATGCATACCGGACTCCTACGGATGATTATGAAATGGGCGATGCAACAGAGTTGGATCCAAGATTGAAACAACTACAGGATATTCTTTGATGCTGAATTTGTTAACACATACTGAAAGTTTTGTCAATGTGACTGTACTATATGTGAATTGTGAAGTGAAATATAGTTTGTACTTCTTGCCAAAAAAAA] [+] EMBL CB617852 [ACCTCCCGCGGCGGGCACCTCTGCCCCTCACCGCCTCCGTCTCGCCGCCGACGATGCTGCCAGGTCGCCGCCGCGGCGGGTGGAATCGGCCGCCGCGCCGTCTCCCTCGCCGGCGTCGCCTCCTGGCTCACCGCCACTGCTGCCGGCCGGGCAGACGCGAGCCCGTTTGACAAATACGTCAAGAAGAAGAAGCTGGAGCCATTGGAGACCTACGTTCCGGCAGTACTGTTGACTCAGGACCAATTCAGGGATCTAGAGAAGTCATTAGAATTTGAGAAGCCAAGATATGATGAGAGCAGATCATTACTTCGTTCTGGTCCAGCATCTTCTCTGCGTATCAATATTCGAGCAGTAAGATACTGATCGTATGGTGAATGTGATTCTGGTTCTCAAGTTAACGAGATACCAAGGCAATAAATATGGGCGTTTGGCTCCATTATATTGGTGGTGTGGCCCACTTTGATACTCTCAATTGAAACTAGCTAGTGGAGTCGCGCATTCGCGCAACCATGACCTGTATGTCAAAACCAGTAGTATATGAGCCCATTTACAGTATGCACTAATCGCACAACTAAAATAAATTTATGTCAAGTTTTAGCTGGTCCATATGTAACAAAGAACACATTATAAATGAGAGTCCTGAATAAAACTGTAGCCTAAACAATAGAGGTTCATTTGTGCATGAAATTAAATTCCAGTCCAAACGATAATGTTGGTATGGGGGTAAACTGTAGGCACATTTCTGCTACCTGTGCTTTATCTCCTGACTAATGTTTGATCATACGGTTCACATTTGTTCT ] [+] EMBL CA999693 [ TGAATAAAACTGTAGCCTAAACAATAGAGGTTCATTTGTGCATGAAATTAAATTCCAGTCCAAACGATAATGTTGGTATGGGGGTAAACTGTAGGCACATTTCTGCTACCTGTGCTTTATCTCCTGACTAATGTTTGATCATACGGTTCACATTTGTTCTCCTTATTTTGCCCTTCTCTAGTTTGTCTTGTTGCATACGTGGTCCAATGAGGTGCTTTGAAAACATTTTGTTTTCACTACTTTAGATATGGCATTAATATTCCTATAGACTGTCTGTTTTAAACATTCAGGAGTTGAGATTAATCAGCAAGTTTCAACTGCCCTTTTTTTTCCTTAAACATCAAGATATTTTACTTGTTCAGATTATGCCCATTGCCATAACTGGTTCAAACATCCAGAGAATGTGTATTCGATCTAATGATGTCAGATTATGTGTGCTTAAAACAAACTAAGCCCACTAGATATGCATTGAATTCACCTGAAGAAGAAAACAAAATGCAGGTGGCGCAGTATGCTTCTAGCAGTGGTCAAGGCAAAGCTGCCTCTGATGCAGTGGACGAATGCTTACGAGCATTGGAAGATCTTGACT ] [-] EMBL CB617853 [ CTCTAGTTTGTCTTGTTGCATACGTGGTCCAATGAGGTGCTTTGAAAACATTTTGTTTTCACTACTTTAGATATGGCATTAATATTCCTATAGACTGTCTGTTTTAAACATTCAGGAGTTGAGATTAATCAGCAAGTTTCAACTGCCCTTTTTATTCCTTAAACATCAAGATATTTTACTTGTTCAGATTATGCCCATTGCCATAACTGGTTCAAACATCCAGAGAATGTGTATTCGATCTAATGATGTCAGATTATGTGTGCTTAAAACAAACTAAGCCCACTAGATATGCATTGAATTCCCCTGAAGAAGAAAACAAAATGCAGGTGGCGCAGTATGCTTCTAGCAGTGGTCAAGGCAAAGCTGCCTCTGATGCAGTGGACGAATGCTTACGAGCATTGGAAGATCTTGACTCA CTGCTACTACAAGCATCA CGGAACAACCCATCAGCGTCTGTCGATGT CATGAGGAGCAAAATCAGTGTAGCCCTTGGAGCTTTAGACAACCTCCTTCAGACTGTGCCATCAGCAGTGCTGGACAAAGGGAAGGCCATTGCCAATGCATACCGGACTCCTACGGATGATTATGAAATGGGCGATGCAACAGAGTTGGATCCAAGATTGAAACAACTACAGGATATTCTTTGATGCTGAATTTGTTAACACATACTGAAAGTTTTGTCAATGTGACTGTACTATATGTGAATTGTGAAGTGAAATATAGTTTGTACTTCTTGCCAAAAAA ] [+] EMBL BI811955 [ catGTGGACGAATGCTTACGAGCATTGGAAGATCTTGACTCACCTGCTACTACAAGCATCACCGGAACAACCCATCAGCGTCTGTCGATGTCCATGAGGA CCAAATCAGTGTAGCCCTTGGAGCTTTAGAC ACCTCCTTCAGACTGTGCCATCA CAGTGCTGGACAAAGGGAA GCCATTGCCAATGCATACCGGACTCCTACGGATGATTATGAAATGGGCGATGCAACAGAGTTGGATCCAAGATTGAGACAACTACAGGATATTCTTTGATGCTGAATTTGTTAACACATACTGAAAGTTTTGTC ATGTGACTGTACTATATGTGAATTGTGAAGTGAAATATAGTTTGTACTTCTTGCCCAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||