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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6838#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3749 fasta sequence
[CGCGTTCCCCTCTCCCTCCCCCTCCCCCCTCTCCGGCGATGAGCTCAGGCGGACGCGGCGGCAAGCGGCGAGGGGCGCCGCCCCCGGGGCCATCCGGGGCGGCGGCGAAGCGGGCCCACCCCGGTGGCACCCCGCAGCCGCCTCCGCCCGCCGCGACGGCGGCGGCGCCCGTGGCGGAGGAGGAGGACATGATGGACGAGGACGTCTTCCTCGACGAGACCATCCTGGCGGAGGACGAGGAGGCGTTGCTGCTGCTCGACCGGGACGAGGCCCTCGCCTCACGCCTCTCCCGCTGGAGGCGCCCCGCGCTCCCCGCCGACCTAGCGTCCGGCTGCTCGCGCAATGTTGCTTTTCAGCAGCTGGAGATAGATTATGTTATTGGTGAGAGCCACAAAGTACTGCTCCCCAACTCATCTGGTCCTGCAGCTATACTCAGGATATTTGGCGTAACTAGAGAAGGTCACAGTGTATGCTGCCAAGTGCATGGATTTGAGCCATATTTTTACATCAGTTGTCCAATGGGGATGGGCCCTGATGATATTTCACGCTTCCACCAAACACTAGAGGGGAGGATGAAGGATTCAAATAGGAACAGCAACGTGCCAAGGTTTGTGAAGAGAATCGAACTTGTGCAGAAGCAGACAATCATGCATTACCAACCACAGCAATCTCAGCCTTTCCTCAAGATAGTGGTTGCTTTGCCAACAATGGTTGCTAGTTGTCGCGGCATCCTGGAAAGGGGCATAACAATTGAAGGCCTTGGTTCGAAGAGTTTTCTGACATATGAAAGCAACATTCTTTTTGCACTTCGCTTCATGATTGACTGCAATATTGTTGGTGGTAATTGGATTGAAGTTCCTGCCGGAAAGTATATGAAGGCAGCTCGTATCATGTCCTATTGTCAGCTAGAGTTGGATTGCCTATATTCGGATTTGGTAAGCCATGCTGCTGAAGGAGAACATTCTAAGATGGCTCCATTTCGCATATTAAGTTTTGATATTGAATGTGCCGGTCGCAAAGGTCACTTCCCAGAACCAACTCATGATCCCGTTATTCAGATAGCTAACTTGGTCACCCTTCAAGGAGAAGGACAACCTTTTGTACGCAATGTTATGACGCTTAAATCATGTTCTCCCATTGTTGGAGTTGATGTTATGTCATTTGACACAGAGAGGGATGTTCTACTTGCTTGGAGGGATTTCATACGTGAAGTGGACCCTGATATTATTATTGGATACAATATCTGCAAATTTGACTTACCCTATCTTATTGAGAGAGCTGAAGTTCTTAAGATAGTAGAGTTTCCAATACTTGGACGAATCAGAAATAGTCGTGTTCGTGTCCGTGACACAACTTTCTCTTCAAGGCAATATGGTATGCGTGAAAGTAAAGATGTAGCAGTGGAAGGAAGAGTACAATTTGATCTTCTGCAGGCTATGCAACGGGATTACAAGCTTAGTTCTTATTCATTAAACTCTGTATCTGCACATTTCCTCGGGGAGCAAAAAGAGGATGTTCATCACTCAATTATATCTGATCTTCAAAATGGGAATTCAGAGACACGAAGACGGCTTGCGGTTTATTGTTTGAAGGATGCCTATCTTCCACAACGACTGCTAGATAAGTTGATGTATATCTACAACTATGTGGAAATGGCAAGAGTCACTGGAGTTCCCATTTCATTTCTTCTTTCAAGGGGACAGAGCATTAAGGTCCTCTCACAGCTACTCAGGAAAGCAAAACAGAAAAACCTTGTTATACCAAATATAAAGGGTCAAGCGTCTGGACAGGATACCTTTGAAGGTGCAACTGTTTTGGAGGCAAGGGCTGGATTTTATGAGAAACCCATTGCGACTTTGGACTTTGCTTCGTTGTATCCATCCATCATGATGGCATATAACCTATGCTACTGTACTTTGGTCCCCCCTGAGGATGCCCGCAAACTCAACCTGCCTCCAGAAAGTGTCAACAAAACCCCATCTGGTGAAACATTTGTGAAACCAGATGTGCAAAAGGGTATACTTCCTGAAATCCTTGAAGAATTGTTGGCTGCTCGGAAAAGGGCGAAAGCAGATTTGAAGGAAGCAAAGGATCCATTTGAAAGGGCCGTTCTTGATGGTCGTCAGCTTGCCCTAAAAATAAGCGCAAACTCTGTCTATGGTTTTACTGGAGCGACTGTTGGTCAATTACCTTGTTTAGAAATTTCTTCAAGTGTGACCAGCTATGGTCGACAGATGATTGAACATACAAAAAAGCTTGTTGAAGATAAATTCACGACACTTGGAGGCTATGAGCACAATGCAGAGGTCATCTATGGAGATACTGATTCTGTAATGGTACAGTTCGGTGTTTCTACTGTTGAGGACGCAATGAAGCTAGGAAGAGAAGCTGCAGACTACATTAGTGGAACATTTATTAAGCCCATCAAGCTTGAGTTTGAGAAGATCTATTTCCCTTATCTACTGATTAGCAAGAAGAGATATGCTGGTTTGTACTGGACAAATCCTGAGAAATTTGACAAAATGGACACGAAAGGTATTGAAACAGTGAGAAGGGACAACTGTTTATTAGTAAAGAACCTGGTTACTGAGTGCCTTCATAAAATACTAGTGGACAGAGATGTTCCTGGTGCAGTTCAATATGTCAAGAACACCATTTCTGATCTACTAATGAACCGTGTAGACTTATCTCTTCTAGTTATAACAAAGGGTTTGACTAAAACAGGAGAGGATTATGCTGTCAAAGCTGCCCATGTGGAGCTTGCTGAGAGAATGCGAAAGAGGGACGCTGCTACTGCT-CCTACT-GTTGG-TGACC-GGGTTCCTTAT-GTTATAAT-CAAAGCAGCAAAAGGGG--CAAAGGCATAT-GAGAGGT-CAGAAGATCCTATTTATGTTTTGGATAATAACATACCAATAGATCCCCAATACTACCTTGAGAACCAAATCAGCAAACCACTTTTGAGGATCTTTGAGCCGATTCTGAAGAATGCCAGTAGAGAGCTGCTTCATGGAAGTCACACCAGGGCTGTTTCAATCTCAACTCCTTCAAATAGTGGAATAATGAAATTTGCAAAGAAACAATTGACATGCCTCGGATGCAAAGCAGTTATAAGTGGTTCCAATCAAACGCTTTGCTTTCATTGCAA-GGGAAGAGAAGCAGAGTTATACTGCAAAACTGTAGGAAACGTTTCTGAGCTGGAGATGCTCTTTGGGAGGCTCTGGACGCAGTGCCAGGAGTGCCAAGGCTCCCTTCATCAGGACGTTCTCTGCACAAGCCGGGATTGTCCTATTTTCTACCGCCGAAGAAAGGCGCAGAAGGATATGGCTGAAGCTAGAGTACAGCTTCAACGTTGGGACTTCTGAGTCCTCTCATACTGACGGAGTACTACTTTCCCCAAATATTGCGAAACCATTACTGTGAGGCACGCCATTGCGGGATCATGTGATTGCATCTTCATGCATGATGGCTCTGGCTTGTTTAGTTGGATCGGCTGAAATAGCTTTGTTCTACGGTCAGTTTGTTGTATTTTTAGGTGGTAGGTTATCTGTACCTCTAGCCGCTAACAGGGTAATCTAGTTGCTTCCCTTGGTGCATTGATGCAGCCATGTGTAAGGTAGATAAACAATTTTTTT---TCATCATCTTTTAACTTCATGAGGTGATTGAGGCTGAGAAGCACCCATTCAAGAAA-ACCCACCATGTGAATCTTTTTAACTTCTAGGCTATTTTCCCATAATGTAAAAAAAAAAAAAAAAAAA]
[+] EMBL AB037899 [CGCGTTCCCCTCTCCCTCCCCCTCCCCCCTCTCCGGCGATGAGCTCAGGCGGACGCGGCGGCAAGCGGCGAGGGGCGCCGCCCCCGGGGCCATCCGGGGCGGCGGCGAAGCGGGCCCACCCCGGTGGCACCCCGCAGCCGCCTCCGCCCGCCGCGACGGCGGCGGCGCCCGTGGCGGAGGAGGAGGACATGATGGACGAGGACGTCTTCCTCGACGAGACCATCCTGGCGGAGGACGAGGAGGCGTTGCTGCTGCTCGACCGGGACGAGGCCCTCGCCTCACGCCTCTCCCGCTGGAGGCGCCCCGCGCTCCCCGCCGACCTAGCGTCCGGCTGCTCGCGCAATGTTGCTTTTCAGCAGCTGGAGATAGATTATGTTATTGGTGAGAGCCACAAAGTACTGCTCCCCAACTCATCTGGTCCTGCAGCTATACTCAGGATATTTGGCGTAACTAGAGAAGGTCACAGTGTATGCTGCCAAGTGCATGGATTTGAGCCATATTTTTACATCAGTTGTCCAATGGGGATGGGCCCTGATGATATTTCACGCTTCCACCAAACACTAGAGGGGAGGATGAAGGATTCAAATAGGAACAGCAACGTGCCAAGGTTTGTGAAGAGAATCGAACTTGTGCAGAAGCAGACAATCATGCATTACCAACCACAGCAATCTCAGCCTTTCCTCAAGATAGTGGTTGCTTTGCCAACAATGGTTGCTAGTTGTCGCGGCATCCTGGAAAGGGGCATAACAATTGAAGGCCTTGGTTCGAAGAGTTTTCTGACATATGAAAGCAACATTCTTTTTGCACTTCGCTTCATGATTGACTGCAATATTGTTGGTGGTAATTGGATTGAAGTTCCTGCCGGAAAGTATATGAAGGCAGCTCGTATCATGTCCTATTGTCAGCTAGAGTTGGATTGCCTATATTCGGATTTGGTAAGCCATGCTGCTGAAGGAGAACATTCTAAGATGGCTCCATTTCGCATATTAAGTTTTGATATTGAATGTGCCGGTCGCAAAGGTCACTTCCCAGAACCAACTCATGATCCCGTTATTCAGATAGCTAACTTGGTCACCCTTCAAGGAGAAGGACAACCTTTTGTACGCAATGTTATGACGCTTAAATCATGTTCTCCCATTGTTGGAGTTGATGTTATGTCATTTGACACAGAGAGGGATGTTCTACTTGCTTGGAGGGATTTCATACGTGAAGTGGACCCTGATATTATTATTGGATACAATATCTGCAAATTTGACTTACCCTATCTTATTGAGAGAGCTGAAGTTCTTAAGATAGTAGAGTTTCCAATACTTGGACGAATCAGAAATAGTCGTGTTCGTGTCCGTGACACAACTTTCTCTTCAAGGCAATATGGTATGCGTGAAAGTAAAGATGTAGCAGTGGAAGGAAGAGTACAATTTGATCTTCTGCAGGCTATGCAACGGGATTACAAGCTTAGTTCTTATTCATTAAACTCTGTATCTGCACATTTCCTCGGGGAGCAAAAAGAGGATGTTCATCACTCAATTATATCTGATCTTCAAAATGGGAATTCAGAGACACGAAGACGGCTTGCGGTTTATTGTTTGAAGGATGCCTATCTTCCACAACGACTGCTAGATAAGTTGATGTATATCTACAACTATGTGGAAATGGCAAGAGTCACTGGAGTTCCCATTTCATTTCTTCTTTCAAGGGGACAGAGCATTAAGGTCCTCTCACAGCTACTCAGGAAAGCAAAACAGAAAAACCTTGTTATACCAAATATAAAGGGTCAAGCGTCTGGACAGGATACCTTTGAAGGTGCAACTGTTTTGGAGGCAAGGGCTGGATTTTATGAGAAACCCATTGCGACTTTGGACTTTGCTTCGTTGTATCCATCCATCATGATGGCATATAACCTATGCTACTGTACTTTGGTCCCCCCTGAGGATGCCCGCAAACTCAACCTGCCTCCAGAAAGTGTCAACAAAACCCCATCTGGTGAAACATTTGTGAAACCAGATGTGCAAAAGGGTATACTTCCTGAAATCCTTGAAGAATTGTTGGCTGCTCGGAAAAGGGCGAAAGCAGATTTGAAGGAAGCAAAGGATCCATTTGAAAGGGCCGTTCTTGATGGTCGTCAGCTTGCCCTAAAAATAAGCGCAAACTCTGTCTATGGTTTTACTGGAGCGACTGTTGGTCAATTACCTTGTTTAGAAATTTCTTCAAGTGTGACCAGCTATGGTCGACAGATGATTGAACATACAAAAAAGCTTGTTGAAGATAAATTCACGACACTTGGAGGCTATGAGCACAATGCAGAGGTCATCTATGGAGATACTGATTCTGTAATGGTACAGTTCGGTGTTTCTACTGTTGAGGACGCAATGAAGCTAGGAAGAGAAGCTGCAGACTACATTAGTGGAACATTTATTAAGCCCATCAAGCTTGAGTTTGAGAAGATCTATTTCCCTTATCTACTGATTAGCAAGAAGAGATATGCTGGTTTGTACTGGACAAATCCTGAGAAATTTGACAAAATGGACACGAAAGGTATTGAAACAGTGAGAAGGGACAACTGTTTATTAGTAAAGAACCTGGTTACTGAGTGCCTTCATAAAATACTAGTGGACAGAGATGTTCCTGGTGCAGTTCAATATGTCAAGAACACCATTTCTGATCTACTAATGAACCGTGTAGACTTATCTCTTCTAGTTATAACAAAGGGTTTGACTAAAACAGGAGAGGATTATGCTGTCAAAGCTGCCCATGTGGAGCTTGCTGAGAGAATGCGAAAGAGGGACGCTGCTACTGCT CCTACT GTTGG TGACC GGGTTCCTTAT GTTATAAT CAAAGCAGCAAAAGGGG CAAAGGCATAT GAGAGGT CAGAAGATCCTATTTATGTTTTGGATAATAACATACCAATAGATCCCCAATACTACCTTGAGAACCAAATCAGCAAACCACTTTTGAGGATCTTTGAGCCGATTCTGAAGAATGCCAGTAGAGAGCTGCTTCATGGAAGTCACACCAGGGCTGTTTCAATCTCAACTCCTTCAAATAGTGGAATAATGAAATTTGCAAAGAAACAATTGACATGCCTCGGATGCAAAGCAGTTATAAGTGGTTCCAATCAAACGCTTTGCTTTCATTGCAA GGGAAGAGAAGCAGAGTTATACTGCAAAACTGTAGGAAACGTTTCTGAGCTGGAGATGCTCTTTGGGAGGCTCTGGACGCAGTGCCAGGAGTGCCAAGGCTCCCTTCATCAGGACGTTCTCTGCACAAGCCGGGATTGTCCTATTTTCTACCGCCGAAGAAAGGCGCAGAAGGATATGGCTGAAGCTAGAGTACAGCTTCAACGTTGGGACTTCTGAGTCCTCTCATACTGACGGAGTACTACTTTCCCCAAATATTGCGAAACCATTACTGTGAGGCACGCCATTGCGGGATCATGTGATTGCATCTTCATGCATGATGGCTCTGGCTTGTTTAGTTGGATCGGCTGAAATAGCTTTGTTCTACGGTCAGTTTGTTGTATTTTTAGGTGGTAGGTTATCTGTACCTCTAGCCGCTAACAGGGTAATCTAGTTGCTTCCCTTGGTGCATTGATGCAGCCATGTGTAAGGTAGATAAACAATTTTTTT TCATCATCTTTTAACTTCATGAGGTGATTGAGGCTGAGAAGCACCCATTCAAGAAA Aaaaa ]
[+] EMBL AU030559 [ TACTGGACAAATCCTGAGAAATTTGACAAAATGGACACGAAAGGTATTGAAACAGTGAGAAGGGACAACTGTTTATTAGTAAAGAACCTGGTTACTGAGTGCCTTCATAAAATACTAGTGGACAGAGATGTTCCTGGTGCAGTTCAATATGTCAAGAACACCATTTCTGATCTACTAATGAACCGTGTAGACTTATCTCTTCTAGTTATAACAAAGGGTTTGACTAAAACAGGAGAGGATTATGCTGTCAAAGCTGCCCATGTGGAGCTTGCTGAGAGAATGCGAAAGAGGGACGCTGCTACTGCTCCCTACTGGTTGGTTGACCGGGGTTCCTTATGGTTATAATCCAAAGCAGCCAAAGGGGGCCAANGGCATATGGAGAGGTCCAGAAG TCCTATTTATGTTTTGGga ]
[-] EMBL CA759879 [ AACAATTGACATGCCTNGGATGCAAAGCAGTTATAAGTGGTTCCAATCAAACACTTTGCTCTCA TGCAAGGGGAAGAGAAGCAGAGTTATACTGCAAAACTGTAGGAAACGTTTCTGAGCTGGAGATGCTCTTTGGGAGGCTCTGGACGCAGTGCCAGGAGTGCCAAGGCTCCCTTCATCAGGACGTTCTCTGCACAAGCCGGGATTGTCCTATTTTCTACCGCCGAAGAAAGGCGCAGAAGGATATGGCTGAAGCTAGAGTACAGCTTCAACGTTGGGACTTCTGAGTCCTCTCATACTGACGGAGTACTACTTTCCCCAAATATTGCGAAACCATTACTGTGAGGCACGCCATTGCGGGATCATGTGATTGCATCTTCATGCATGATGGCTCTGGCTTGTTTAGTTGGATCGGCTGAAATAGCTTTGTTCTACGGTCAGTTTGTTGTATTTTTAGGTGGTAGGTTAGCTGTACCTCTAGCCGCTAACAGGGTAATCTAGTTGCTTCCCTTGGTGCATTGATGCAGCCATGTGTAAGGTAGATAAACAATTTTTTTTCATCATCATCTTTTAACTTCATGAGGTGATTGAGGCTGAGAAGCACCCATTCAAGAAATCCCCCCCATGTGAATCTTTTTAACTTCTAGGCTATTTTCCCATAATGTAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU101484 [ TCTGGACGCAGTGCCAGGAGTGCCAAGGCTCCCTTCATCAGGACGTTCTCTGCACAAGCCGGGATTGTCCTATTTTCTACCGCCGAAGAAAGGCGCAGAAGGATATGGCTGAAGCTAGAGTACAGCTTCAACGTTGGGACTTCTGAGTCCTCTCATACTGACGGAGTACTACTTTCCCCAAATATTGCGAAACCATTACTGTGAGGCACGCCATTGCGGGATCATGTGATTGCATCTTCATGCATGATGGCTCTGGCTTGTTTAGTTGGATCGGCTGAAATAGCTTTGTTCTACGGTCAGTTTGTTGTATTTTTAGGTGGTAGGTTATCTGTACCTCTAGCCGCTAACAGGGTAATCTAGTTGCTTCCCTTGGTGCATTGATGCAGCCATGTGTAAGGTAGATAAACAATTTTTTT TCATCATCTTTTAACTTCATGAGGTGATTGAGGCTGAGAAGCACCCATTCAAGAAA TCCCACCATGTGAATCTTTTTAACTTCTAGGCTATTTTCACAAAAaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||