cluster # 6842

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Oryza sativa
cluster # 6842 cluster # 6842 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6842#0 length = 575 sequences # 4

consensusID : consensus_6842#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 575
fasta sequence

                              [GCGCTTGTCTGACCGGGGATCTTCGAGCGCATCCCACATCNCGGGATCTTANCGACGTCNGACAACTGCGAGGCCTACTGCACCTGGCGTGGGACAAGTGGACGCGGCGTACCC-GCGACACGGTTCTACGTGGGGATGACGGCATCGGAGATGACG-CA-CGGGTGGGTGCACCCCAAGAACGTCTACTACGAC-GTCGCCCCGTCCACGCAGAAGGCGGAC-AACTACGGCGGCTTCATGATCTGGGACCGATACTACGACAAGCTGAGCAACTACACCAGCATGGTCAAGGCCTATGCTTGAGCCTCATCTGATCGTGATCGACTTCTCCCATCCGTGCCAGTAGGCCACA-CAGCATCACTGGCTACTACAAACTCTGTCTGTCGAATACTCTGTCTGT-C-ATCGCCTATCCTCCACCTCGTCTATGTCCGTGTATGCATTTGTGCTTGCAAGAAAGAATAAAGTGAAGAATAAAC-GTTATTAGGGCTACATAATAAAAGTGGAGAATAAACNTTATATGTAT-AACCC-GTTGA-C-ATAAAGTACTCAATCTCGAGCATTTTCCTGGCTAAAAAAAAAAA]

[+] EMBL BM038825             [GCGCTTGTCTGACCGGGGATCTTCGAGCGCATCCCACATCNCGGGATCTTANCGACGTCNGACAACTGCGAGGCCTACTGCACCTGGCGTGGGACAAGTGGACGCGGCGTACCC GCGACACGGTTCTACGTGGGGATGACGGCATCGGAGATGACG CA CGGGTGGGTGCACCCCAAGAACGTCTACTACGACAGTCGCCCCGTCCACGCAGAAGGCGGAC AACTACGGCGGCTTCATGATCTGGGACCGATACTACGACAAGCTGAGCAACTACACCAGCATGGTCAAGGCCTATGCTTGAGCCTCATCTGATCGTGATCGACTTCTCCCATCCGTGCCAGTAGGCCACA CAGCCTCACTGGCTACTAC AACTCTGTCTGTCGAATACTCTGTCTGT C ATCGCCTATCCTCCACCTCGTCTATGTCCGTGTATGCATTTGTGCTTGCAAGAAAGAATAAAGTGAAGAATAAAC GTTATTAGGGCTACATAATAACNCTGGAGAATAAACTTTATATGTAA AAaa                                                      ]
[+] EMBL BM419409             [                                                                                                           CGTACCCGGCGACACGGTTTTACGTGGGGATGACGGCATCGGAGATGACGCCACCGGGTGGGTGCACCCCCAGAACGTCTACTACGAC GTCGCCCCGTCCACGCAGAAGGCGGAC AACTACGGCGGCTTCATGATCTGGGACCGATACTACGACAAGCTGAGCAACTACNCCNGCATGGTCAAGGCCTATGCTTGAGCCTCATCTGATCGTGATCGACTTCTCCCATCCGTGCCCGTAGGCCACAGCAGCATCACTGGCTACTACNAACTCTGTCTGTCGAATACTCTGTCTGTCC ATCGCCTATCCTCCCCCTCGTCTATGTCCGTGTANGCATTTGTGCTTGCCAGAAAGAATAAAGTGAAGAATAACN GTTATTAGGGCTACATAATAAAAGTGGAGAATAAACNTTATATGTATGACCCC GTTGACC ATAAAGTACTCCATCTCGAGCNTTTTCCTGGCTTAAAAAAAAAA]
[+] EMBL BQ907374             [                                                                                                                                                               A CGGGTGGGTGCACCCCAAGAACGTCTACTACGAC GTCGCCCCGTCCACGCAGAA GCGGAC AACTACGGCGGCTTCATGATCTGGGACCGATACTACGACAAGCTGAGCAACTACACCAGCATGGTCAAGGCCTATGCTTGAGCCTCATCTGATCGTGATCGACTTCTCCCATCCGTGCCAGTAGGCCAAG CAGCATCACTGGCTACTACAAACTCTGTCTGTCGAATACTCTGTCTGT C ATCGCCTATCCTCCACCTCGTCTATGTCCGTGTATGCATTTGTGCTTGCAAGAAAGAATAAAGTGAAGAATAAAC GTTATTAGGGCTACATAATAAAAGTGGAGAATAAAC TTATATGTAT GACCC GTTGA C ATAAAGTACTCAATCTCGAGCATTTTCCTGGCTAAAAAA     ]
[+] EMBL BI811769             [                                                                                                                                                                              CCCAAGAACGTCTACTACGAC GTCGCCCCGTCCACGCAGAA GCGGACAAACTAC GCGGCTTCATGATCTGGGACCGATACTACGACAAGCTGAGCAACTACACCAGCATGGTCAAGGCCTATGCTTGAGCCTCATCTGATCGTGATCGACTTCTCCCATCCGTGCCAGTAGGCCAAG CAGCATCACTGGCTACTACAAACTCTGTCTGTCGAATACTCTGTCTGT CAATCGCCTATCCTCCACCTCGTCTATGTCCGTGTATGCATTTGTGCTTGCAAGAAAGAATAAAGTGAAGAATAAACAGTTATTAGGGCTACATAATAAAAGTGGAGAATAAACATTATATGTAT GACCCAGTTGA CAATAAAGTACTCAATCTCGAGCATTTTCCTGGCTAAAAA      ]




>consensus_6842#0
GCGCTTGTCTGACCGGGGATCTTCGAGCGCATCCCACATCNCGGGATCTTANCGACGTCN
GACAACTGCGAGGCCTACTGCACCTGGCGTGGGACAAGTGGACGCGGCGTACCCGCGACA
CGGTTCTACGTGGGGATGACGGCATCGGAGATGACGCACGGGTGGGTGCACCCCAAGAAC
GTCTACTACGACGTCGCCCCGTCCACGCAGAAGGCGGACAACTACGGCGGCTTCATGATC
TGGGACCGATACTACGACAAGCTGAGCAACTACACCAGCATGGTCAAGGCCTATGCTTGA
GCCTCATCTGATCGTGATCGACTTCTCCCATCCGTGCCAGTAGGCCACACAGCATCACTG
GCTACTACAAACTCTGTCTGTCGAATACTCTGTCTGTCATCGCCTATCCTCCACCTCGTC
TATGTCCGTGTATGCATTTGTGCTTGCAAGAAAGAATAAAGTGAAGAATAAACGTTATTA
GGGCTACATAATAAAAGTGGAGAATAAACNTTATATGTATAACCCGTTGACATAAAGTAC
TCAATCTCGAGCATTTTCCTGGCTAAAAAAAAAAA

clustalw multiple alignements is not computed in this case