These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6850#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2179 fasta sequence [CTTTGCGAGCAGCGAGGAGGGTGGAATCGAGTTCGAGCGGCGGCGAATCGGGAGCGGCGAGATTGGGGGAGGCGGCCGGAGATGGAGGAGGAGGTGACGGGGAGTCGAGGGGGGTTGGGGGGAGGGAAGAAGATGGCGGCGGGGGAGGTGGAGCTGAAGGAGAAGGCGGGGACGGCGTGGAGCCACTCGTACCTGAACCAGAAGCCATGGCACCCGCTCTCCTACCCGAACCAGCGGCGGAAGTGGATCGCCGAGCAGATCCACGCCAACCGCGCGCGCCGCCAGGAGGAGGTGCAGCGTGAGTTCGCGCAGGAGCAGGAGTTCTTCCGCCAGACCGCCCTCTTCTCCAAGAAGGACAAGGAGAAGAGAGTGCAAAAGCAGCTGAAATTGAAGATGAGAAGAGGAGGTCTGGTGAAGGTGATGCAACCCAAAGTGCTGCTGCTGCAAGCACCTCTTCAATGCCTGATAAGGAACTTGACAAGACCCACGCAGGTCCAGATAAGAAAAACAGGCCAAAAGATGTTTTTGGCCGGCCATTGCCAACAGAACAAGAATTTGAAGTGCTGAAAAATGCTCCAAGGTTGGAGACAGGTGCTCCTGCGAGGGTTAAACCATTTGGAGTTGAAGTTCGTAACGTTAGATGTTTAAGGTGTGGAAACTATGGTCATCAGAGTGGTGACCGAGAATGCCCACTGAAGGATGTGATCATGCCTAACGAGGAGAGCCGACTGAAAAGGGATGATCCTCTTACAGCTATAATGGCACAGACTGATTCAAGTGAGCCTTTGAAGTGGGAACTTAGGCAAAAGCCAGGCATGAGCCCTCCACGTGGTGGATACAACCCAGATGATCCTAATCAGCAGATTGTAGCCGAGGACATCTTTGATGAATATGGAGGATTTCTTGGTGGATGTGATATTCCAGCTCTTCTTTCCAACTTTTCTGCTAGCAAATCAAAGAAACGCTCCAAGAGTAAAAGCAAGCATAGGCAGGCTGAGCCTGCTGCTCATGAGGAATCTTCACACTCTGAAGCTGAGAAGAGCAACAGGACATCAAGGAGCAAGAGAAAGAAAGAATATTGTTCTGATTCGTCATTTTCTGGTGCTGAGGTGGAAGCTAGAAAAAGCAAGCAAAAATCAAAGCACAAGAAGAAACACCTGCCAGAGTCTTTGTCTGATTCAAAAGTTGAAGTTGGTAGAGATACAAGAAGACATCAAAAGAGAGAGCATAGGAAGAAGAAAAGAAATATCACTGAGTCAGAGTCTTCATCTGATTCAGAAGTTGATATAGATACAAGGAAACATCCGAAGAGGGAGCACAGGAAGAAGAAAAGAGATGTCACTGAGTCATATTCTTCATCTGATTCAGAAGTTGAAGTTGATAGAGATACAAGGAGGCATCCGAAGAGAGAGCATAGGAAGGAGAAAAGAAATATGACTGAAAATGGGCATTCAAGCCGATCGAGGGAGAAGCACCACTACAGTGACACTAGTACTTCGGACAATGAGAAGCACTCAATGGGACATAAGGATGAGCAATACTACAGCGATTCAAGTTCTTCTAGGAGCAATCGGCATTCAAGAAGGTCAAGGGAAAAGAGGTACTACAGTGACTCAAGTTCTCCTGAGCACAATAGGCATTCAGGGAGATCAAAGGAGAAGAGGGCCTATACTGACTTGAGCACGCATGACAGGGATAGG-CATTCAAAGAGATCGAGGGATAAGCGGGAGTACACTGAATCAAGGCCTTATGAGAGCAATAAGCATTCAAGGACATTGAAGGTGAACTGGCACTACTCTGATTCAAGTGCTTCTGATTATTCAAACTCCGAACGGCACTATAGTCATCGCCATCGTAGAAGAAAATGAGCAGTGTTGTATAATCTGCATGATGTCTCCACAGAAGATCGCTCTGCCGTTTATATGATGTCATTAGCTACATATGCTTGGTCATTTTCTTAAGGCCACCAGGGTCCACGGGTTGCTGGTGTTTGGTGACTGCAGCTGCTAATCGACTTGTGATGCGATAGTAATGTATGTGACTGAATTTTGTCTTCTGTAGAAGAATTGTTGTGCCTTTTGTTGTAGGCTTGTACCCGAGGGACTTTTATTAATTTAAAAAATATCTTGTTTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK100402 [CTTTGCGAGCAGCGAGGAGGGTGGAATCGAGTTCGAGCGGCGGCGAATCGGGAGCGGCGAGATTGGGGGAGGCGGCCGGAGATGGAGGAGGAGGTGACGGGGAGTCGAGGGGGGTTGGGGGGAGGGAAGAAGATGGCGGCGGGGGAGGTGGAGCTGAAGGAGAAGGCGGGGACGGCGTGGAGCCACTCGTACCTGAACCAGAAGCCATGGCACCCGCTCTCCTACCCGAACCAGCGGCGGAAGTGGATCGCCGAGCAGATCCACGCCAACCGCGCGCGCCGCCAGGAGGAGGTGCAGCGTGAGTTCGCGCAGGAGCAGGAGTTCTTCCGCCAGACCGCCCTCTTCTCCAAGAAGGACAAGGAGAAGAGAGTGCAAAAGCAGCTGAAATTGAAGATGAGAAGAGGAGGTCTGGTGAAGGTGATGCAACCCAAAGTGCTGCTGCTGCAAGCACCTCTTCAATGCCTGATAAGGAACTTGACAAGACCCACGCAGGTCCAGATAAGAAAAACAGGCCAAAAGATGTTTTTGGCCGGCCATTGCCAACAGAACAAGAATTTGAAGTGCTGAAAAATGCTCCAAGGTTGGAGACAGGTGCTCCTGCGAGGGTTAAACCATTTGGAGTTGAAGTTCGTAACGTTAGATGTTTAAGGTGTGGAAACTATGGTCATCAGAGTGGTGACCGAGAATGCCCACTGAAGGATGTGATCATGCCTAACGAGGAGAGCCGACTGAAAAGGGATGATCCTCTTACAGCTATAATGGCACAGACTGATTCAAGTGAGCCTTTGAAGTGGGAACTTAGGCAAAAGCCAGGCATGAGCCCTCCACGTGGTGGATACAACCCAGATGATCCTAATCAGCAGATTGTAGCCGAGGACATCTTTGATGAATATGGAGGATTTCTTGGTGGATGTGATATTCCAGCTCTTCTTTCCAACTTTTCTGCTAGCAAATCAAAGAAACGCTCCAAGAGTAAAAGCAAGCATAGGCAGGCTGAGCCTGCTGCTCATGAGGAATCTTCACACTCTGAAGCTGAGAAGAGCAACAGGACATCAAGGAGCAAGAGAAAGAAAGAATATTGTTCTGATTCGTCATTTTCTGGTGCTGAGGTGGAAGCTAGAAAAAGCAAGCAAAAATCAAAGCACAAGAAGAAACACCTGCCAGAGTCTTTGTCTGATTCAAAAGTTGAAGTTGGTAGAGATACAAGAAGACATCAAAAGAGAGAGCATAGGAAGAAGAAAAGAAATATCACTGAGTCAGAGTCTTCATCTGATTCAGAAGTTGATATAGATACAAGGAAACATCCGAAGAGGGAGCACAGGAAGAAGAAAAGAGATGTCACTGAGTCATATTCTTCATCTGATTCAGAAGTTGAAGTTGATAGAGATACAAGGAGGCATCCGAAGAGAGAGCATAGGAAGGAGAAAAGAAATATGACTGAAAATGGGCATTCAAGCCGATCGAGGGAGAAGCACCACTACAGTGACACTAGTACTTCGGACAATGAGAAGCACTCAATGGGACATAAGGATGAGCAATACTACAGCGATTCAAGTTCTTCTAGGAGCAATCGGCATTCAAGAAGGTCAAGGGAAAAGAGGTACTACAGTGACTCAAGTTCTCCTGAGCACAATAGGCATTCAGGGAGATCAAAGGAGAAGAGGGCCTATACTGACTTGAGCACGCATGACAGGGATAGG CATTCAAAGAGATCGAGGGATAAGCGGGAGTACACTGAATCAAGGCCTTATGAGAGCAATAAGCATTCAAGGACATTGAAGGTGAACTGGCACTACTCTGATTCAAGTGCTTCTGATTATTCAAACTCCGAACGGCACTATAGTCATCGCCATCGTAGAAGAAAATGAGCAGTGTTGTATAATCTGCATGATGTCTCCACAGAAGATCGCTCTGCCGTTTATATGATGTCATTAGCTACATATGCTTGGTCATTTTCTTAAGGCCACCAGGGTCCACGGGTTGCTGGTGTTTGGTGACTGCAGCTGCTAATCGACTTGTGATGCGATAGTAATGTATGTGACTGAATTTTGTCTTCTGTAGAAGAATTGTTGTGCCTTTTGTTGTAGGCTTGTACCCGAGGGACTTTTATTAATTTAAAAAATAT ] [+] EMBL C73668 [ AAGGAAACATCCGAAGAGGGAGCACAGGAAGAAGAAAAGAGATGTCACTGAGTCATATTCTTCATCTGATTCAGAAGTTGAAGTTGATAGAGATACAAGGAGGCATCCGAAGAGAGAGCATAGGAAGGAGAAAAGAAATATGACTGAAAATGGGCATTCAAGCCGATCGAGGGAGAAGCACCACTACAGTGACACTAGTACTTCGGACAATGAGAAGCACTCAATGGGACATAAGGATGAGCAATACTACAGCGATTCAAGTTCTTCTAGGAGCAATCGGCATTCAAGAAGGTCAAGGGAAAAGAGGTACTACAGTGACTCAAGTTCTCCTGAGCACAATAGGCATTCAGNGAGATCAAAGGAGAAGAGGGCCTATACTGACTTGAGCACGCATTACAGGGATAGGCCTTTCAAAGAGATCGAGGGATAAGCCGGAGTA ] [-] EMBL CA763393 [ AGAAGCACCACTACAGTGACACTAGTACTTCGGACAATGAGAAGCACTCAATGGGACATAAGGATGAGCAATACTACAGCGATTCAAGTTCTTCTAGGAGCAATCGGCATTCAAGAAGGTCAAGGGAAAAGAGGTACTACAGTGACTCAAGTTCTCCTGAGCACAATAGGCATTCAAGGAGATCAAAGGAGAAGAGGGCCTATACTGACTTGAGCACGCATGACAGGGATAGG CATTCAAAGAGATCGAGGGATAAGCGGGAGTACACTGAATCAAGGCCTTATGAGAGCAATAAGCATTCAAGGACATTGAAGGTGAACTGGCACTACTCTGATTCAAGTGCTTCTGATTATTCAAACTCCGAACGGCACTATAGTCATCGCCATCGTAGAAGAAAATGAGCAGTGTTGTATAATCTGCATGATGTCTCCACAGAAGATCGCTCTGCCGTTTATATGATGTCATTAGCTACATATGCTTGGTCATTTTCTTAAGGCCACCAGGGTCCACGGGTTGCTGGTGTTTGGTGACTGCAGCTGCTAATCGACTTGTGATGCGATAGTAATGTATGTGACTGAATTTTGTCTTCTGTAGAAGAATTGTTGTGCCTTTTGTTGTAGGCTTGTACCCGAGGGACTTTTATTAATTTAAAAAATATCTTGTTTGGCAAAAAAAA ] [+] EMBL AU091914 [ AATCAAGGCCTTNTGAGAGCAATAAGCATTCAAGGACATTGAAGGTGAACTGGCACTACTCTGATTCAAGTGCTTCTGATTATTCAAACTCCGAACGGCACTATAGTCATCGCCATCGTAGAAGAAAATGAGCAGTGTTGTATAATCTGCATGATGTCTCCACAGAAGATCGCTCTGCCGTTTATATGATGTCATTAGCTACATATGCTTGGTCATTTTCTTAAGGCCACCAGGGTCCACGGGTTGCTGGTGTTTGGTGACTGCAGCTGCTAATCGACTTGTGATGCGATAGTAATGTATGTGACTGAATTTTGTCTTCTGTAGAAGAATTGTTGTGCCTTTTGTTGTAGGCTTGTACCCGAGGGACTTTTATTAATTTAAAAACCATCTTGTTTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||