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Oryza sativa
cluster # 6887 cluster # 6887       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6887#0 length = 3334 sequences # 3  
 consensus_6887#1 length = 379 sequences # 1  
consensusID : consensus_6887#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3334
fasta sequence 
                              [GTTTAACGCAAAACTTGTTTTGCAGAGTATCCAGAGTAGACTCGAGAAAAGTCGTCGTTCGCCATTCCCATCCGCCGCCAAGGCTCCAAACCTCCCTTCCCCTCCGCAGCTCCGCCTTACGACGCCATGGCCGTCGCCTCGCTGTCGCCGCCGCCGGATTGAGGGCGCCGCCATCAGCCGGCCGCGTCGCTGCTCTTCGCGTGCTCCTCGCAACGGGGGGCGGCGGGGTCCGTCCAACTGCCGCTCCTACCACCTCTTCATCAGCAGCAGCAACGCCCGCTTTCTCCGCCACCGGCAGCCGAGGCGCCGCCTCCTCCGCCCACATCGCAGCGTTGACTTCTCCAGGTTGGCTCGCCAACTCCATCGGCTGTAGACTTCCAGCCTTCCAGATGGCAAGTGCCTTGACGGGAGTGATGACATCCGTCATCAACAAGCTCACTGCTCTTCTTGGGAAGGAGTACATGAAGTTGAAAGGAGTACAGGGGGAGGTGGAGTTTATGATAGATGAGCTGAGCAGCATGAATGCTCTCCTTCATAGGCTGGCGGAGGAGGACCAACACCTTGATGTGCAAACGAAGGAGTGGCGTAACCAAGTGCGCGAAATGTATTATGACATTGAGGACTGTATCGATGACTTCATGCATCACCTTGGCCATACTGACATTGCTGAGTCTGCAGGGCTTGTCCATAGGATGGCCCAACACCTTAAGACTCTGAGGGTGCGCCACCAAATTGCCAACCAAATCGAGAAGCTCAAAGCACGCGTTGAAGATGCAAGCAAGCGGCGATTGAGGTATAAGCTTGATGAGCGCACCTTCAATCTTAGTACTGCAGGGGCCATTGACCCCCGGTTACCTTCTCTATATGCTGAGTCAGACGGGCTTGTTGGAATTGAACAACCAAGGGATGTGGTTATCAAGTTGCTAACGGAGGGAGAGGGTGCATCATCGCAGAAGCTAAAGGTGATATCCATTGTGGGTCCTGGAGGTCTAGGTAAAACTACACTTGCGAATGAGGTGTTTCGCAAACTAGAGAGCCAGTTCCAGTGTCGAGCTTTTGTTTCTCTGTCACAGCAGCCTGATGTGAAGAAGATTGTAAGAAACATATACTGTCAAGTCAGCCAGCAGGAGTATGGTAACATAGATATATGGGATGAGGAAAAGCTGATAAACGCAACCCGAGAATTCCTAACGAACAAGAGGTACTTTGTCGTCATTGATGATATATGGAGTACTCAAGCATGGAAGACCATAAGATGTGCTTTATTTGTGAATAATTGTGGAAGCAGAATAATGACGACAACACGCAATATGGCAATAGCCAAGTCATGTTGCACTCCTGACCATGATCGTGTCTTTGAAATAATGCCTCTTAGTATAGATAACTCGAAGAGTTTGTTTTTGAAACGAATATTTGGCTCAAAGGATGTGTGCATTCCTCAATTGGATGAGGTTTGTTATGAAATATTGAAAAAATGTGGCGGGTCGCCATTGGCTATTATTACAATAGCTAGCTTATTGGCTAATAAAGCTAATACCAAGGAAGAATGGGAAAGGGTGCGTAATTCTATCGGTTCAACACTGCAAAAAGATCCTGATGTAGAAGAGATGAGAAGGATATTATCCTTGAGCTATGATGATCTTCCCCAACATTTGAAGACATGCTTACTGTATCTAAGCATATTTCCAGAAGATTATGAGATTGAGAGGGATCGACTAGTAGAGAGGTGGGTTGCTGAAGGATTCATTATTACAGAGGGGGGGCATGACTTGAAGGAAATAGGAGACTGTTATTTTAGTGATCTTATCAATAGAAGCATGATTGAACCGGTGAAAATCCAATACAATGGTCGAGTTTTTTCCTGCCGAGTCCATGATATGATTCTTGATCTCCTTACATGCAAGTCAACTGAAGAAAATTTTGCCACCTTCATGGGTGGCCAAAATCAGAAATTAGTGCTACAGGGTAAGGTTCGTCGGCTCTCTCTCAACTATTACACTCAAGATCACATCATGGTTCCATCAACAGCAATCATCACACATTGCCGATCTCTCAGTATTTTTGGGTATGCTGAACAGAAGCCTCCTCTTTCAATGTTTCCAGTTCTTCGTGTACTTGATATAGAAAATGGTGAAGATATGGAAAGCAGCTATACCAAACACATAAGGAAGCTGATTCAGTTGAAGTACCTGCGACTGAATGTAAGAAGCGTAGCTGAACTTCCTGAAAAACTTGGAGAGCTACAACATTTGCAGACTCTTGATCTCAGACGGACAAACATAAGAAAATTGCCAGAGAGCTTCGTTCGTCTGCAAAATTTGACATATTTGCGTGTCAATAATCTGGATTTGCCTGAAGGAATTGGACATCTGCATGCTCTGCAGGAGCTAACAGAGATCAGAATCAGCCAGGACTGCTTGGCATCTTCCTTGTTGGAGCTAAGAAATCTGACGAAGCACACATTGACTACAAAGTTTTCGCCGATAATTTAGTGTCATCGCTTCGCAAACTGGGCAGACTCAACCTTCGAATAATGTGCATCCTGGGTTATTATGCGTGTTCCATAGAGTTCTTGTTGGATTCATGGTTCCCCTCCCCTCATCTCCTCCAATCATTTGCGATGGGCATGAACTATCATTTCCCCAGAGTCCCATCCTGGATCGCATCACTTGACAACCTCACTTGCTTAGAAATCAACATAGACCTGGTGGATGAGAAAGTGATACAGATTCTTGGGGATTTACCTGTTCTGATATTTCTGTGGCTGATATCAAAAGAAGCAGGTCCCAATGAAAGGCTCGTCATAAGAAGTAACATGTTTGTATGCCTGAAGGAGTTCCACTTCACCTGCTGGAGAAATTGGGAAGGGCTGATGTTTGAAGCTGGGGCAATGGCAAAGGTTGAGATGCTGCGGGTTTCGTTCGACGCCGGTGGCAGTGTTCTTGATTTCGGCATCCAGCACCTGGCTTCCCTCAGGCATCTCATCGTCGAGATCGTCTGTGGCGGTGCGACGCTTCGGGAGGTGGAGGCACTGGAAGATGCCATTAGGCACTCAGCTGATCTCCTTCCATGCCACCCAGCAGTTGAAGTTCGAACTTGGGATGAAGAAAAGATGGTGAAGGAGGAGGTGCAAATCATGGCTGAAGAGAAGATCCAAACAAACAGCTAAAAAACCAGCATGACTTTGCTACCAGTGAAGGCAGCTGAGCAGTATTTTAAGGCCCCGTTTGGTACGGCTCCAAACTCCAACTCCCAGCTCCAAACTCCTACTCCAGTTGAAGCTAGCTCCTATTGGAGTTACAGACCGATCAAAAGTGTTTGGCAAACTTTTAGC]

[+] EMBL AK065775             [GTTTAACGCAAAACTTGTTTTGCAGAGTATCCAGAGTAGACTCGAGAAAAGTCGTCGTTCGCCATTCCCATCCGCCGCCAAGGCTCCAAACCTCCCTTCCCCTCCGCAGCTCCGCCTTACGACGCCATGGCCGTCGCCTCGCTGTCGCCGCCGCCGGATTGAGGGCGCCGCCATCAGCCGGCCGCGTCGCTGCTCTTCGCGTGCTCCTCGCAACGGGGGGCGGCGGGGTCCGTCCAACTGCCGCTCCTACCACCTCTTCATCAGCAGCAGCAACGCCCGCTTTCTCCGCCACCGGCAGCCGAGGCGCCGCCTCCTCCGCCCACATCGCAGCGTTGACTTCTCCAGGTTGGCTCGCCAACTCCATCGGCTGTAGACTTCCAGCCTTCCAGATGGCAAGTGCCTTGACGGGAGTGATGACATCCGTCATCAACAAGCTCACTGCTCTTCTTGGGAAGGAGTACATGAAGTTGAAAGGAGTACAGGGGGAGGTGGAGTTTATGATAGATGAGCTGAGCAGCATGAATGCTCTCCTTCATAGGCTGGCGGAGGAGGACCAACACCTTGATGTGCAAACGAAGGAGTGGCGTAACCAAGTGCGCGAAATGTATTATGACATTGAGGACTGTATCGATGACTTCATGCATCACCTTGGCCATACTGACATTGCTGAGTCTGCAGGGCTTGTCCATAGGATGGCCCAACACCTTAAGACTCTGAGGGTGCGCCACCAAATTGCCAACCAAATCGAGAAGCTCAAAGCACGCGTTGAAGATGCAAGCAAGCGGCGATTGAGGTATAAGCTTGATGAGCGCACCTTCAATCTTAGTACTGCAGGGGCCATTGACCCCCGGTTACCTTCTCTATATGCTGAGTCAGACGGGCTTGTTGGAATTGAACAACCAAGGGATGTGGTTATCAAGTTGCTAACGGAGGGAGAGGGTGCATCATCGCAGAAGCTAAAGGTGATATCCATTGTGGGTCCTGGAGGTCTAGGTAAAACTACACTTGCGAATGAGGTGTTTCGCAAACTAGAGAGCCAGTTCCAGTGTCGAGCTTTTGTTTCTCTGTCACAGCAGCCTGATGTGAAGAAGATTGTAAGAAACATATACTGTCAAGTCAGCCAGCAGGAGTATGGTAACATAGATATATGGGATGAGGAAAAGCTGATAAACGCAACCCGAGAATTCCTAACGAACAAGAGGTACTTTGTCGTCATTGATGATATATGGAGTACTCAAGCATGGAAGACCATAAGATGTGCTTTATTTGTGAATAATTGTGGAAGCAGAATAATGACGACAACACGCAATATGGCAATAGCCAAGTCATGTTGCACTCCTGACCATGATCGTGTCTTTGAAATAATGCCTCTTAGTATAGATAACTCGAAGAGTTTGTTTTTGAAACGAATATTTGGCTCAAAGGATGTGTGCATTCCTCAATTGGATGAGGTTTGTTATGAAATATTGAAAAAATGTGGCGGGTCGCCATTGGCTATTATTACAATAGCTAGCTTATTGGCTAATAAAGCTAATACCAAGGAAGAATGGGAAAGGGTGCGTAATTCTATCGGTTCAACACTGCAAAAAGATCCTGATGTAGAAGAGATGAGAAGGATATTATCCTTGAGCTATGATGATCTTCCCCAACATTTGAAGACATGCTTACTGTATCTAAGCATATTTCCAGAAGATTATGAGATTGAGAGGGATCGACTAGTAGAGAGGTGGGTTGCTGAAGGATTCATTATTACAGAGGGGGGGCATGACTTGAAGGAAATAGGAGACTGTTATTTTAGTGATCTTATCAATAGAAGCATGATTGAACCGGTGAAAATCCAATACAATGGTCGAGTTTTTTCCTGCCGAGTCCATGATATGATTCTTGATCTCCTTACATGCAAGTCAACTGAAGAAAATTTTGCCACCTTCATGGGTGGCCAAAATCAGAAATTAGTGCTACAGGGTAAGGTTCGTCGGCTCTCTCTCAACTATTACACTCAAGATCACATCATGGTTCCATCAACAGCAATCATCACACATTGCCGATCTCTCAGTATTTTTGGGTATGCTGAACAGAAGCCTCCTCTTTCAATGTTTCCAGTTCTTCGTGTACTTGATATAGAAAATGGTGAAGATATGGAAAGCAGCTATACCAAACACATAAGGAAGCTGATTCAGTTGAAGTACCTGCGACTGAATGTAAGAAGCGTAGCTGAACTTCCTGAAAAACTTGGAGAGCTACAACATTTGCAGACTCTTGATCTCAGACGGACAAACATAAGAAAATTGCCAGAGAGCTTCGTTCGTCTGCAAAATTTGACATATTTGCGTGTCAATAATCTGGATTTGCCTGAAGGAATTGGACATCTGCATGCTCTGCAGGAGCTAACAGAGATCAGAATCAGCCAGGACTGCTTGGCATCTTCCTTGTTGGAGCTAAGAAATCTGACGAAGCACACATTGACTACAAAGTTTTCGCCGATAATTTAGTGTCATCGCTTCGCAAACTGGGCAGACTCAACCTTCGAATAATGTGCATCCTGGGTTATTATGCGTGTTCCATAGAGTTCTTGTTGGATTCATGGTTCCCCTCCCCTCATCTCCTCCAATCATTTGCGATGGGCATGAACTATCATTTCCCCAGAGTCCCATCCTGGATCGCATCACTTGACAACCTCACTTGCTTAGAAATCAACATAGACCTGGTGGATGAGAAAGTGATACAGATTCTTGGGGATTTACCTGTTCTGATATTTCTGTGGCTGATATCAAAAGAAGCAGGTCCCAATGAAAGGCTCGTCATAAGAAGTAACATGTTTGTATGCCTGAAGGAGTTCCACTTCACCTGCTGGAGAAATTGGGAAGGGCTGATGTTTGAAGCTGGGGCAATGGCAAAGGTTGAGATGCTGCGGGTTTCGTTCGACGCCGGTGGCAGTGTTCTTGATTTCGGCATCCAGCACCTGGCTTCCCTCAGGCATCTCATCGTCGAGATCGTCTGTGGCGGTGCGACGCTTCGGGAGGTGGAGGCACTGGAAGATGCCATTAGGCACTCAGCTGATCTCCTTCCATGCCACCCAGCAGTTGAAGTTCGAACTTGGGATGAAGAAAAGATGGTGAAGGAGGAGGTGCAAATCATGGCTGAAGAGAAGATCCAAACAAACAGCTAAAAAACCAGCATGACTTTGCTACCAGTGAAGGCAGCTGAGCAGTATTTTAAGGCCCCGTTTGGTACGGCTCCAAACTCCAACTCCCAGCTCCAAACTCCTACTCCAGTTGAAGCTAGCTCCTATTGGAGTTACAGACCGATCAAAAGTGTTTGGCAAACTTTTAGC]
[+] EMBL AK073176             [                                                                                    TCCAAACCTCCCTTCCCCTCCGCAGCTCCGCCTTACGACGCCATGGCCGTCGCCTCGCTGTCGCCGCCGCCGGATTGAGGGCGCCGCCATCAGCCGGCCGCGTCGCTGCTCTTCGCGTGCTCCTCGCAACGGGGGGCGGCGGGGTCCGTCCAACTGCCGCTCCTACCACCTCTTCATCAGCAGCAGCAACGCCCGCTTTCTCCGCCACCGGCAGCCGAGGCGCCGCCTCCTCCGCCCACATCGCAGCGTTGACTTCTCCAGGTTGGCTCGCCAACTCCATCGGCTGTAGACTTCCAGCCTTCCAGATGGCAAGTGCCTTGACGGGAGTGATGACATCCGTCATCAACAAGCTCACTGCTCTTCTTGGGAAGGAGTACATGAAGTTGAAAGGAGTACAGGGGGAGGTGGAGTTTATGATAGATGAGCTGAGCAGCATGAATGCTCTCCTTCATAGGCTGGCGGAGGAGGACCAACACCTTGATGTGCAAACGAAGGAGTGGCGTAACCAAGTGCGCGAAATGTATTATGACATTGAGGACTGTATCGATGACTTCATGCATCACCTTGGCCATACTGACATTGCTGAGTCTGCAGGGCTTGTCCATAGGATGGCCCAACACCTTAAGACTCTGAGGGTGCGCCACCAAATTGCCAACCAAATCGAGAAGCTCAAAGCACGCGTTGAAGATGCAAGCAAGCGGCGATTGAGGTATAAGCTTGATGAGCGCACCTTCAATCTTAGTACTGCAGGGGCCATTGACCCCCGGTTACCTTCTCTATATGCTGAGTCAGACGGGCTTGTTGGAATTGAACAACCAAGGGATGTGGTTATCAAGTTGCTAACGGAGGGAGAGGGTGCATCATCGCAGAAGCTAAAGGTGATATCCATTGTGGGTCCTGGAGGTCTAGGTAAAACTACACTTGCGAATGAGGTGTTTCGCAAACTAGAGAGCCAGTTCCAGTGTCGAGCTTTTGTTTCTCTGTCACAGCAGCCTGATGTGAAGAAGATTGTAAGAAACATATACTGTCAAGTCAGCCAGCAGGAGTATGGTAACATAGATATATGGGATGAGGAAAAGCTGATAAACGCAACACGAGAATTCCTAACGAACAAGAGGTACTTTGTCGTCATTGATGATATATGGAGTACTCAAGCATGGAAGACCATAAGATGTGCTTTATTTGTGAATAATTGTGGAAGCAGAATAATGACGACAACACGCAATATGGCAATAGCCAAGTCATGTTGCACTCCTGACCATGATCGTGTCTTTGAAATAATGCCTCTTAGTATAGATAACTCGAAGAGTTTGTTTTTGAAACGAATATTTGGCTCAAAGGATGTGTGCATTCCTCAATTGGATGAGGTTTGTTATGAAATATTGAAAAAATGTGGCGGGTCGCCATTGGCTATTATTACAATAGCTAGCTTATTGGCTAATAAAGCTAATACCAAGGAAGAATGGGAAAGGGTGCGTAATTCTATCGGTTCAACACTGCAAAAAGATCCTGATGTAGAAGAGATGAGAAGGATATTATCCTTGAGCTATGATGATCTTCCCCAACATTTGAAGACATGCTTACTGTATCTAAGCACATTTCCAGAAGATTATGAGATTGAGAGGGATCGACTAGTAGAGAGGTGGGTTGCTGAAGGATTCATTATTACAGAGGGGGGGCATGACTTGAAGGAAATAGGAGACTGTTATTTTAGTGATCTTATCAATAGAAGCATGATTGAACCGGTGAAAATCCAATACAATGGTCGAGTTTTTTCCTGCCGAGTCCATGATATGATTCTTGATCTCCTTACATGCAAGTCAACTGAAGAAAATTTTGCCACCTTCATGGGTGGCCAAAATCAGAAATTAGTGCTACAGGGTAAGGTTCGTCGGCTCTCTCTCAACTATTACACTCAAGATCACATCATGGTTCCATCAACAGCAATCATCACACATTGCCGATCTCTCGGTATTTTTGGGTATGCTGAACAGAAGCCTCCTCTTTCAATGTTTCCAGTTCTTCGTGTACTTGATATAGAAAATGGTGAAGATATGGAAAGCAGCTATACCAAACACATAAGGAAGCTGATTCAGTTGAAGTACCTGCGACTGAATGTAAGAAGCGTAGCTGAACTTCCTGAAAAACTTGGAGAGCTACAACATTTGCAGACTCTTGATCTCAGACGGACAAACATAAGAAAATTGCCAGAGAGCTTCGTTCGTCTGCAAAATTTGACATATTTGCGTGTCAATAATCTGGATTTGCCTGAAGGAATTGGACATCTGCATGCTCTGCAGGAGCTAACAGAGATCAGAATCAGCCAGGACTGCTTGGCATCTTCCTTGTTGGAGCTAAGAAATCTGACGAAGCACACATTGACTACAAAGTTTTCGCCGATAATTTAGTGTCATCGCTTCGCAAACTGGGCAGACTCAACCTTCGAATAATGTGCATCCTGGGTTATTATGCGTGTTCCATAGAGTTCTTGTTGGATTCATGGTTCCCCTCCCCTCATCTCCTCCAATCATTTGCGATGGGCATGAACTATCATTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB639604             [                                                                                                                 GCCTTACGACGCCATGGCCGTCGCCTCGCTGTCGCCGCCGCCGGATTGAGGGCGCCGCCATCAGCCGGCCGCGTCGCTGCTCTTCGCGTGCTCCTCGCAACGGGGGGCGGCGGGGTCCGTCCAACTGCCGCTCCTACCACCTCTTCATCAGCAGCAGCAACGCCCGCTTTCTCCGCCACCGGCAGCCGAGGCGCCGCCTCCTCCGCCCACATCGCAGCGTTGACTTCTCCAGGTTGGCTCGCCAACTCCATCGGCTGTAGACTTCCAGCCTTCCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]




>consensus_6887#0
GTTTAACGCAAAACTTGTTTTGCAGAGTATCCAGAGTAGACTCGAGAAAAGTCGTCGTTC
GCCATTCCCATCCGCCGCCAAGGCTCCAAACCTCCCTTCCCCTCCGCAGCTCCGCCTTAC
GACGCCATGGCCGTCGCCTCGCTGTCGCCGCCGCCGGATTGAGGGCGCCGCCATCAGCCG
GCCGCGTCGCTGCTCTTCGCGTGCTCCTCGCAACGGGGGGCGGCGGGGTCCGTCCAACTG
CCGCTCCTACCACCTCTTCATCAGCAGCAGCAACGCCCGCTTTCTCCGCCACCGGCAGCC
GAGGCGCCGCCTCCTCCGCCCACATCGCAGCGTTGACTTCTCCAGGTTGGCTCGCCAACT
CCATCGGCTGTAGACTTCCAGCCTTCCAGATGGCAAGTGCCTTGACGGGAGTGATGACAT
CCGTCATCAACAAGCTCACTGCTCTTCTTGGGAAGGAGTACATGAAGTTGAAAGGAGTAC
AGGGGGAGGTGGAGTTTATGATAGATGAGCTGAGCAGCATGAATGCTCTCCTTCATAGGC
TGGCGGAGGAGGACCAACACCTTGATGTGCAAACGAAGGAGTGGCGTAACCAAGTGCGCG
AAATGTATTATGACATTGAGGACTGTATCGATGACTTCATGCATCACCTTGGCCATACTG
ACATTGCTGAGTCTGCAGGGCTTGTCCATAGGATGGCCCAACACCTTAAGACTCTGAGGG
TGCGCCACCAAATTGCCAACCAAATCGAGAAGCTCAAAGCACGCGTTGAAGATGCAAGCA
AGCGGCGATTGAGGTATAAGCTTGATGAGCGCACCTTCAATCTTAGTACTGCAGGGGCCA
TTGACCCCCGGTTACCTTCTCTATATGCTGAGTCAGACGGGCTTGTTGGAATTGAACAAC
CAAGGGATGTGGTTATCAAGTTGCTAACGGAGGGAGAGGGTGCATCATCGCAGAAGCTAA
AGGTGATATCCATTGTGGGTCCTGGAGGTCTAGGTAAAACTACACTTGCGAATGAGGTGT
TTCGCAAACTAGAGAGCCAGTTCCAGTGTCGAGCTTTTGTTTCTCTGTCACAGCAGCCTG
ATGTGAAGAAGATTGTAAGAAACATATACTGTCAAGTCAGCCAGCAGGAGTATGGTAACA
TAGATATATGGGATGAGGAAAAGCTGATAAACGCAACCCGAGAATTCCTAACGAACAAGA
GGTACTTTGTCGTCATTGATGATATATGGAGTACTCAAGCATGGAAGACCATAAGATGTG
CTTTATTTGTGAATAATTGTGGAAGCAGAATAATGACGACAACACGCAATATGGCAATAG
CCAAGTCATGTTGCACTCCTGACCATGATCGTGTCTTTGAAATAATGCCTCTTAGTATAG
ATAACTCGAAGAGTTTGTTTTTGAAACGAATATTTGGCTCAAAGGATGTGTGCATTCCTC
AATTGGATGAGGTTTGTTATGAAATATTGAAAAAATGTGGCGGGTCGCCATTGGCTATTA
TTACAATAGCTAGCTTATTGGCTAATAAAGCTAATACCAAGGAAGAATGGGAAAGGGTGC
GTAATTCTATCGGTTCAACACTGCAAAAAGATCCTGATGTAGAAGAGATGAGAAGGATAT
TATCCTTGAGCTATGATGATCTTCCCCAACATTTGAAGACATGCTTACTGTATCTAAGCA
TATTTCCAGAAGATTATGAGATTGAGAGGGATCGACTAGTAGAGAGGTGGGTTGCTGAAG
GATTCATTATTACAGAGGGGGGGCATGACTTGAAGGAAATAGGAGACTGTTATTTTAGTG
ATCTTATCAATAGAAGCATGATTGAACCGGTGAAAATCCAATACAATGGTCGAGTTTTTT
CCTGCCGAGTCCATGATATGATTCTTGATCTCCTTACATGCAAGTCAACTGAAGAAAATT
TTGCCACCTTCATGGGTGGCCAAAATCAGAAATTAGTGCTACAGGGTAAGGTTCGTCGGC
TCTCTCTCAACTATTACACTCAAGATCACATCATGGTTCCATCAACAGCAATCATCACAC
ATTGCCGATCTCTCAGTATTTTTGGGTATGCTGAACAGAAGCCTCCTCTTTCAATGTTTC
CAGTTCTTCGTGTACTTGATATAGAAAATGGTGAAGATATGGAAAGCAGCTATACCAAAC
ACATAAGGAAGCTGATTCAGTTGAAGTACCTGCGACTGAATGTAAGAAGCGTAGCTGAAC
TTCCTGAAAAACTTGGAGAGCTACAACATTTGCAGACTCTTGATCTCAGACGGACAAACA
TAAGAAAATTGCCAGAGAGCTTCGTTCGTCTGCAAAATTTGACATATTTGCGTGTCAATA
ATCTGGATTTGCCTGAAGGAATTGGACATCTGCATGCTCTGCAGGAGCTAACAGAGATCA
GAATCAGCCAGGACTGCTTGGCATCTTCCTTGTTGGAGCTAAGAAATCTGACGAAGCACA
CATTGACTACAAAGTTTTCGCCGATAATTTAGTGTCATCGCTTCGCAAACTGGGCAGACT
CAACCTTCGAATAATGTGCATCCTGGGTTATTATGCGTGTTCCATAGAGTTCTTGTTGGA
TTCATGGTTCCCCTCCCCTCATCTCCTCCAATCATTTGCGATGGGCATGAACTATCATTT
CCCCAGAGTCCCATCCTGGATCGCATCACTTGACAACCTCACTTGCTTAGAAATCAACAT
AGACCTGGTGGATGAGAAAGTGATACAGATTCTTGGGGATTTACCTGTTCTGATATTTCT
GTGGCTGATATCAAAAGAAGCAGGTCCCAATGAAAGGCTCGTCATAAGAAGTAACATGTT
TGTATGCCTGAAGGAGTTCCACTTCACCTGCTGGAGAAATTGGGAAGGGCTGATGTTTGA
AGCTGGGGCAATGGCAAAGGTTGAGATGCTGCGGGTTTCGTTCGACGCCGGTGGCAGTGT
TCTTGATTTCGGCATCCAGCACCTGGCTTCCCTCAGGCATCTCATCGTCGAGATCGTCTG
TGGCGGTGCGACGCTTCGGGAGGTGGAGGCACTGGAAGATGCCATTAGGCACTCAGCTGA
TCTCCTTCCATGCCACCCAGCAGTTGAAGTTCGAACTTGGGATGAAGAAAAGATGGTGAA
GGAGGAGGTGCAAATCATGGCTGAAGAGAAGATCCAAACAAACAGCTAAAAAACCAGCAT
GACTTTGCTACCAGTGAAGGCAGCTGAGCAGTATTTTAAGGCCCCGTTTGGTACGGCTCC
AAACTCCAACTCCCAGCTCCAAACTCCTACTCCAGTTGAAGCTAGCTCCTATTGGAGTTA
CAGACCGATCAAAAGTGTTTGGCAAACTTTTAGC

consensusID : consensus_6887#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 379
fasta sequence 
                              [TAAAAGCTCGTCAATAAGAATAACATGTGTTGTATGCTGAAGGAGTGTGCCAGTTCACCTGCTGGAGAAATTGGAAGGCCTGATGTTTGAAGACTGGGGCAATGCCAAAGGTTGAGGATGCTCGGTTGTCGTTCGACGCCGTTGCCAGTGTTCTTGATTGTGCGGCATCCAGCACCTGGGCTGTGCCCTGCAGGCATGCTGCATGCGTCGAGATGCGTCTGTGGCGGTGCGACGCTTCGGGAGTGGAGCACTGGAAGATGGCCATTAGGCACTGCAGCTGATCTGCCTTGCCATGGCCACCCAGCAGTTGAAGTTGCGAACTTGGGATGAAGAAAAGATGGTGAAGGAGGAGGTGCAAATCATGGCTGAAGAGAAGATG]

[+] EMBL BI809835             [TAAAAGCTCGTCAATAAGAATAACATGTGTTGTATGCTGAAGGAGTGTGCCAGTTCACCTGCTGGAGAAATTGGAAGGCCTGATGTTTGAAGACTGGGGCAATGCCAAAGGTTGAGGATGCTCGGTTGTCGTTCGACGCCGTTGCCAGTGTTCTTGATTGTGCGGCATCCAGCACCTGGGCTGTGCCCTGCAGGCATGCTGCATGCGTCGAGATGCGTCTGTGGCGGTGCGACGCTTCGGGAGTGGAGCACTGGAAGATGGCCATTAGGCACTGCAGCTGATCTGCCTTGCCATGGCCACCCAGCAGTTGAAGTTGCGAACTTGGGATGAAGAAAAGATGGTGAAGGAGGAGGTGCAAATCATGGCTGAAGAGAAGATG]




>consensus_6887#1
TAAAAGCTCGTCAATAAGAATAACATGTGTTGTATGCTGAAGGAGTGTGCCAGTTCACCT
GCTGGAGAAATTGGAAGGCCTGATGTTTGAAGACTGGGGCAATGCCAAAGGTTGAGGATG
CTCGGTTGTCGTTCGACGCCGTTGCCAGTGTTCTTGATTGTGCGGCATCCAGCACCTGGG
CTGTGCCCTGCAGGCATGCTGCATGCGTCGAGATGCGTCTGTGGCGGTGCGACGCTTCGG
GAGTGGAGCACTGGAAGATGGCCATTAGGCACTGCAGCTGATCTGCCTTGCCATGGCCAC
CCAGCAGTTGAAGTTGCGAACTTGGGATGAAGAAAAGATGGTGAAGGAGGAGGTGCAAAT
CATGGCTGAAGAGAAGATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6887#0      GTTTAACGCAAAACTTGTTTTGCAGAGTATCCAGAGTAGACTCGAGAAAAGTCGTCGTTC 60
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      GCCATTCCCATCCGCCGCCAAGGCTCCAAACCTCCCTTCCCCTCCGCAGCTCCGCCTTAC 120
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      GACGCCATGGCCGTCGCCTCGCTGTCGCCGCCGCCGGATTGAGGGCGCCGCCATCAGCCG 180
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      GCCGCGTCGCTGCTCTTCGCGTGCTCCTCGCAACGGGGGGCGGCGGGGTCCGTCCAACTG 240
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      CCGCTCCTACCACCTCTTCATCAGCAGCAGCAACGCCCGCTTTCTCCGCCACCGGCAGCC 300
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      GAGGCGCCGCCTCCTCCGCCCACATCGCAGCGTTGACTTCTCCAGGTTGGCTCGCCAACT 360
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      CCATCGGCTGTAGACTTCCAGCCTTCCAGATGGCAAGTGCCTTGACGGGAGTGATGACAT 420
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      CCGTCATCAACAAGCTCACTGCTCTTCTTGGGAAGGAGTACATGAAGTTGAAAGGAGTAC 480
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      AGGGGGAGGTGGAGTTTATGATAGATGAGCTGAGCAGCATGAATGCTCTCCTTCATAGGC 540
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TGGCGGAGGAGGACCAACACCTTGATGTGCAAACGAAGGAGTGGCGTAACCAAGTGCGCG 600
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      AAATGTATTATGACATTGAGGACTGTATCGATGACTTCATGCATCACCTTGGCCATACTG 660
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      ACATTGCTGAGTCTGCAGGGCTTGTCCATAGGATGGCCCAACACCTTAAGACTCTGAGGG 720
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TGCGCCACCAAATTGCCAACCAAATCGAGAAGCTCAAAGCACGCGTTGAAGATGCAAGCA 780
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      AGCGGCGATTGAGGTATAAGCTTGATGAGCGCACCTTCAATCTTAGTACTGCAGGGGCCA 840
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TTGACCCCCGGTTACCTTCTCTATATGCTGAGTCAGACGGGCTTGTTGGAATTGAACAAC 900
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      CAAGGGATGTGGTTATCAAGTTGCTAACGGAGGGAGAGGGTGCATCATCGCAGAAGCTAA 960
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      AGGTGATATCCATTGTGGGTCCTGGAGGTCTAGGTAAAACTACACTTGCGAATGAGGTGT 1020
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TTCGCAAACTAGAGAGCCAGTTCCAGTGTCGAGCTTTTGTTTCTCTGTCACAGCAGCCTG 1080
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      ATGTGAAGAAGATTGTAAGAAACATATACTGTCAAGTCAGCCAGCAGGAGTATGGTAACA 1140
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TAGATATATGGGATGAGGAAAAGCTGATAAACGCAACCCGAGAATTCCTAACGAACAAGA 1200
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      GGTACTTTGTCGTCATTGATGATATATGGAGTACTCAAGCATGGAAGACCATAAGATGTG 1260
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      CTTTATTTGTGAATAATTGTGGAAGCAGAATAATGACGACAACACGCAATATGGCAATAG 1320
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      CCAAGTCATGTTGCACTCCTGACCATGATCGTGTCTTTGAAATAATGCCTCTTAGTATAG 1380
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      ATAACTCGAAGAGTTTGTTTTTGAAACGAATATTTGGCTCAAAGGATGTGTGCATTCCTC 1440
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      AATTGGATGAGGTTTGTTATGAAATATTGAAAAAATGTGGCGGGTCGCCATTGGCTATTA 1500
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TTACAATAGCTAGCTTATTGGCTAATAAAGCTAATACCAAGGAAGAATGGGAAAGGGTGC 1560
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      GTAATTCTATCGGTTCAACACTGCAAAAAGATCCTGATGTAGAAGAGATGAGAAGGATAT 1620
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TATCCTTGAGCTATGATGATCTTCCCCAACATTTGAAGACATGCTTACTGTATCTAAGCA 1680
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TATTTCCAGAAGATTATGAGATTGAGAGGGATCGACTAGTAGAGAGGTGGGTTGCTGAAG 1740
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      GATTCATTATTACAGAGGGGGGGCATGACTTGAAGGAAATAGGAGACTGTTATTTTAGTG 1800
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      ATCTTATCAATAGAAGCATGATTGAACCGGTGAAAATCCAATACAATGGTCGAGTTTTTT 1860
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      CCTGCCGAGTCCATGATATGATTCTTGATCTCCTTACATGCAAGTCAACTGAAGAAAATT 1920
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TTGCCACCTTCATGGGTGGCCAAAATCAGAAATTAGTGCTACAGGGTAAGGTTCGTCGGC 1980
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TCTCTCTCAACTATTACACTCAAGATCACATCATGGTTCCATCAACAGCAATCATCACAC 2040
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      ATTGCCGATCTCTCAGTATTTTTGGGTATGCTGAACAGAAGCCTCCTCTTTCAATGTTTC 2100
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      CAGTTCTTCGTGTACTTGATATAGAAAATGGTGAAGATATGGAAAGCAGCTATACCAAAC 2160
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      ACATAAGGAAGCTGATTCAGTTGAAGTACCTGCGACTGAATGTAAGAAGCGTAGCTGAAC 2220
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TTCCTGAAAAACTTGGAGAGCTACAACATTTGCAGACTCTTGATCTCAGACGGACAAACA 2280
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TAAGAAAATTGCCAGAGAGCTTCGTTCGTCTGCAAAATTTGACATATTTGCGTGTCAATA 2340
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      ATCTGGATTTGCCTGAAGGAATTGGACATCTGCATGCTCTGCAGGAGCTAACAGAGATCA 2400
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      GAATCAGCCAGGACTGCTTGGCATCTTCCTTGTTGGAGCTAAGAAATCTGACGAAGCACA 2460
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      CATTGACTACAAAGTTTTCGCCGATAATTTAGTGTCATCGCTTCGCAAACTGGGCAGACT 2520
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      CAACCTTCGAATAATGTGCATCCTGGGTTATTATGCGTGTTCCATAGAGTTCTTGTTGGA 2580
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      TTCATGGTTCCCCTCCCCTCATCTCCTCCAATCATTTGCGATGGGCATGAACTATCATTT 2640
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      CCCCAGAGTCCCATCCTGGATCGCATCACTTGACAACCTCACTTGCTTAGAAATCAACAT 2700
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      AGACCTGGTGGATGAGAAAGTGATACAGATTCTTGGGGATTTACCTGTTCTGATATTTCT 2760
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      GTGGCTGATATCAAAAGAAGCAGGTCCCAATGAAAGGCTCGTCATAAGAAGTAACATGT- 2819
consensus_6887#1      -------------------------------TAAAAGCTCGTCAATAAGAATAACATGTG 29
                                                      *** ********  *  * ******** 

consensus_6887#0      TTGTATGCCTGAAGGAGTT--CCACTTCACCTGCTGGAGAAATTGGGAAGGGCTGATGTT 2877
consensus_6887#1      TTGTATGC-TGAAGGAGTGTGCCAGTTCACCTGCTGGAGAAATTGG-AAGGCCTGATGTT 87
                      ******** *********   *** ********************* **** ********

consensus_6887#0      TGAAG-CTGGGGCAATGGCAAAGGTTGAG-ATGCTGCGGGTTTCGTTCGACGCCGGTGGC 2935
consensus_6887#1      TGAAGACTGGGGCAATGCCAAAGGTTGAGGATGCT-CGGTTGTCGTTCGACGCCGTTGCC 146
                      ***** *********** *********** ***** *** * ************* ** *

consensus_6887#0      AGTGTTCTTGATTT--CGGCATCCAGCACCTGGCTT----CCCTCAGGCATCTCAT---C 2986
consensus_6887#1      AGTGTTCTTGATTGTGCGGCATCCAGCACCTGGGCTGTGCCCTGCAGGCATGCTGCATGC 206
                      *************   *****************  *    **  *******        *

consensus_6887#0      GTCGAGAT-CGTCTGTGGCGGTGCGACGCTTCGGGAGGTGGAGGCACTGGAAGATG-CCA 3044
consensus_6887#1      GTCGAGATGCGTCTGTGGCGGTGCGACGCTTCGGGAG-TGGAG-CACTGGAAGATGGCCA 264
                      ******** **************************** ***** ************ ***

consensus_6887#0      TTAGGCACT-CAGCTGATCTCCTT--CCATG-CCACCCAGCAGTTGAAGTT-CGAACTTG 3099
consensus_6887#1      TTAGGCACTGCAGCTGATCTGCCTTGCCATGGCCACCCAGCAGTTGAAGTTGCGAACTTG 324
                      ********* ********** * *  ***** ******************* ********

consensus_6887#0      GGATGAAGAAAAGATGGTGAAGGAGGAGGTGCAAATCATGGCTGAAGAGAAGATCCAAAC 3159
consensus_6887#1      GGATGAAGAAAAGATGGTGAAGGAGGAGGTGCAAATCATGGCTGAAGAGAAGATG----- 379
                      ******************************************************      

consensus_6887#0      AAACAGCTAAAAAACCAGCATGACTTTGCTACCAGTGAAGGCAGCTGAGCAGTATTTTAA 3219
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      GGCCCCGTTTGGTACGGCTCCAAACTCCAACTCCCAGCTCCAAACTCCTACTCCAGTTGA 3279
consensus_6887#1      ------------------------------------------------------------
                                                                                  

consensus_6887#0      AGCTAGCTCCTATTGGAGTTACAGACCGATCAAAAGTGTTTGGCAAACTTTTAGC 3334
consensus_6887#1      -------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)