cluster # 6891

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Oryza sativa
cluster # 6891 cluster # 6891 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6891#0 length = 1320 sequences # 4
consensusID : consensus_6891#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1320
fasta sequence
                              [ACTGAACCGCCGCAGCCGCACTCCTCTCCCGCGCTCATCCGTTCGTCTGTCGTCTGTTCCGGTTGCTTTGGCGGGCAGCTAGGGTTTAGGCGCGGGGCCCTCCCGAATCCCCGATGTACGGCGTCGGCGTCGGCGGCGGCGGCGGCGGGAACTACGATGGCGGGGGAGGGAACGCCAGCTCCCTCTTCGGCGGCGGCGGATTCATGCCCTCGCAGGCGACCAACGCCGCGGAGGGGACCAGCGGCGGCGGCGGCGGCTTCCCCAAGAGTCGGAACGCCCAGGCGCTGCTCCCGCTCACCGTGAAGCAGATCATGGACGCGTCCCAGACCAACGACGACAAGTCGAATTTTGCTGTCAATGGCATGGAGGTGTCCACGGTTAGGCTTGTAGGACGCATGTTAAATAAGCTTGATCGGGTTACGGATGTATCATTCACTCTTGATGATGGTACAGGCAGGGTACCTGTGAATCGC-TGGGAAAACGATAGCACTGATACTAAGGAGATGGCTGACATTCAGAATGGTGACTATGTTATTGTCAATGGTGGTCTAAAAGGTTTTCAAGGGAAGCGTCAGGTGGTTGCTTACTCTGTGAGGCGTATAACCAACTTCAATGATGTAACACATCACTTTCTTCACTGCGTTCATGTGCACTTGGAGCTTACCAGGCCGAAGTCCCAAGTAAATGCTAATACAGCAACAGGAACTCCTAACCAAACTATGCCTAGGGATAGCATGGCGTATAACCAAAGTCCACTTACTAATCAGGCCTCAACATTTTCTGCACCACAAAATACTGGTACTGGAACAAATATGATCGACTTGGTCTTGAATGTTTTTCATGACCCAGCAGTTATGAATGATGACCATGGAGTAGGCGTAGATTATGTGAGCCGTCGTCTTAATCTACCAGAGGAAACAGTCGGGAAAATCATT-ATAGACCAAGTTGATCTGGGACATTTGTATGCCACTATCGATGACCACCA-TTACAAGTCCACAATGAATGGTTGATCGTATTCAATATTATACGTATGCTTCACAGCTTCAAGGTCGCATGGAGCCAAGAAATGTGTGCACTCCGCGAGAGTAGTTACTGCAGAGTGCCTCGCGTGATTTTTCTACAGGAGATCACCAGGCAATCAGCTTAACTGTTCAATTAAGTTGTTTATCTAAATAACTACTCCCTTGGCAGTCAGGCGAGTAGCTTGATAGCA-TGTTAGATCTTTAGGAGCTTCTTTTGTGTTTCAAACAACTATGAACGTGTTTGCAATTGAAGCATCTTATTTTCTTATGA-CAGTA-CAGGCAAGTTACTCAAAAAAAA]

[+] EMBL AK073723             [ACTGAACCGCCGCAGCCGCACTCCTCTCCCGCGCTCATCCGTTCGTCTGTCGTCTGTTCCGGTTGCTTTGGCGGGCAGCTAGGGTTTAGGCGCGGGGCCCTCCCGAATCCCCGATGTACGGCGTCGGCGTCGGCGGCGGCGGCGGCGGGAACTACGATGGCGGGGGAGGGAACGCCAGCTCCCTCTTCGGCGGCGGCGGATTCATGCCCTCGCAGGCGACCAACGCCGCGGAGGGGACCAGCGGCGGCGGCGGCGGCTTCCCCAAGAGTCGGAACGCCCAGGCGCTGCTCCCGCTCACCGTGAAGCAGATCATGGACGCGTCCCAGACCAACGACGACAAGTCGAATTTTGCTGTCAATGGCATGGAGGTGTCCACGGTTAGGCTTGTAGGACGCATGTTAAATAAGCTTGATCGGGTTACGGATGTATCATTCACTCTTGATGATGGTACAGGCAGGGTACCTGTGAATCGC TGGGAAAACGATAGCACTGATACTAAGGAGATGGCTGACATTCAGAATGGTGACTATGTTATTGTCAATGGTGGTCTAAAAGGTTTTCAAGGGAAGCGTCAGGTGGTTGCTTACTCTGTGAGGCGTATAACCAACTTCAATGATGTAACACATCACTTTCTTCACTGCGTTCATGTGCACTTGGAGCTTACCAGGCCGAAGTCCCAAGTAAATGCTAATACAGCAACAGGAACTCCTAACCAAACTATGCCTAGGGATAGCATGGCGTATAACCAAAGTCCACTTACTAATCAGGCCTCAACATTTTCTGCACCACAAAATACTGGTACTGGAACAAATATGATCGACTTGGTCTTGAATGTTTTTCATGACCCAGCAGTTATGAATGATGACCATGGAGTAGGCGTAGATTATGTGAGCCGTCGTCTTAATCTACCAGAGGAAACAGTCGGGAAAATCATT ATAGACCAAGTTGATCTGGGACATTTGTATGCCACTATCGATGACCACCA TTACAAGTCCACAATGAATGGTTGATCGTATTCAATATTATACGTATGCTTCACAGCTTCAAGGTCGCATGGAGCCAAGAAATGTGTGCACTCCGCGAGAGTAGTTACTGCAGAGTGCCTCGCGTGATTTTTCTACAGGAGATCACCAGGCAATCAGCTTAACTGTTCAATTAAGTTGTTTATCTAAATAACTACTCCCTTGGCAGTCAGGCGAGTAGCTTGATAGCA TGTTAGATCTTTAGGAGCTTCTTTTGTGTTTCAAACAACTATGAACGTGTTTGCAATTGAAGCATCTTATTTTCTTATGA CAGTA CAGGC                 ]
[+] EMBL AU090513             [                                                                                          CGCGGGGCCCTCCCGAATCCCCGATGTACGGCGTCGGCGTCGGCGGCGGCGGCGGCGGGAACTACGATGGCGGGGGAGGGAACGCCAGCNCCCTCTTCGGCGGCGGCGGATTCATGCNCTCGCAGGCGACCAACGCCGCGGAGGGGACCAGCNGCGGCGGCGGCGGCTTCCCCAAGAGTTGGAACGCCCAGGCGCTGCTCCCGCTCACCGTGAAGCAGATCATGGACGCGTCCCAGAACAACGACGACAAGT GAATTTTGCTGT AATGGCATGGAGGTGTCCACGGTTAGGCTTTTAGGACGCATGTTAAATAAGCTTGATCGGGTTAACGATGTTTTAATCACTCTTGATGATGGTANAGGCAAGGTANCTTTTAATTGCTTGGGAAAACGATAACCCTta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BI809535             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACAGTCGGGAAAATCATTGATAGACCAAGTTGATCTGGGACATTTGTATGCCACTATCGATGACCACCAGTTACAAGTCCACAATGAATGGTTGATCGTATTCAATGTTATACGTATGCTTCACAGCTTCAAGGTCGCATGGAGCCAAGAAATGTGTGCACTCCGCGAGAGTAGTTACTGCAGAGTGCCTCGCGTGATTTTTCTACAGGAGATCACCAGGCAATCAGCTTAACTGTTCAATTAAGTTGTTTATCTAAATAACTACTCCCTTGGCAGTCAGGCGAGTAGCTTGATAGCACTGTTAGATCTTTAGGAG   CTTTTGTGTTTCAAACAACTATGAACGTGTTTGCAATTGAAGCATCTTATTTTCTTATGACCAGTACCAGGCAAGTTACTCAAAAAAAA]
[+] EMBL AU032338             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAATAACTACTCCCTTGGCAGTCAGGCGAGTAGCTTGATAGCA TGTTAGATCTTTAGGAGCTTCTTTTGTGTTTCAAACAACTATGAACGTGTTTGCAATTGAAGCATCTTATTTTCTTATGA CAaaa                       ]




>consensus_6891#0
ACTGAACCGCCGCAGCCGCACTCCTCTCCCGCGCTCATCCGTTCGTCTGTCGTCTGTTCC
GGTTGCTTTGGCGGGCAGCTAGGGTTTAGGCGCGGGGCCCTCCCGAATCCCCGATGTACG
GCGTCGGCGTCGGCGGCGGCGGCGGCGGGAACTACGATGGCGGGGGAGGGAACGCCAGCT
CCCTCTTCGGCGGCGGCGGATTCATGCCCTCGCAGGCGACCAACGCCGCGGAGGGGACCA
GCGGCGGCGGCGGCGGCTTCCCCAAGAGTCGGAACGCCCAGGCGCTGCTCCCGCTCACCG
TGAAGCAGATCATGGACGCGTCCCAGACCAACGACGACAAGTCGAATTTTGCTGTCAATG
GCATGGAGGTGTCCACGGTTAGGCTTGTAGGACGCATGTTAAATAAGCTTGATCGGGTTA
CGGATGTATCATTCACTCTTGATGATGGTACAGGCAGGGTACCTGTGAATCGCTGGGAAA
ACGATAGCACTGATACTAAGGAGATGGCTGACATTCAGAATGGTGACTATGTTATTGTCA
ATGGTGGTCTAAAAGGTTTTCAAGGGAAGCGTCAGGTGGTTGCTTACTCTGTGAGGCGTA
TAACCAACTTCAATGATGTAACACATCACTTTCTTCACTGCGTTCATGTGCACTTGGAGC
TTACCAGGCCGAAGTCCCAAGTAAATGCTAATACAGCAACAGGAACTCCTAACCAAACTA
TGCCTAGGGATAGCATGGCGTATAACCAAAGTCCACTTACTAATCAGGCCTCAACATTTT
CTGCACCACAAAATACTGGTACTGGAACAAATATGATCGACTTGGTCTTGAATGTTTTTC
ATGACCCAGCAGTTATGAATGATGACCATGGAGTAGGCGTAGATTATGTGAGCCGTCGTC
TTAATCTACCAGAGGAAACAGTCGGGAAAATCATTATAGACCAAGTTGATCTGGGACATT
TGTATGCCACTATCGATGACCACCATTACAAGTCCACAATGAATGGTTGATCGTATTCAA
TATTATACGTATGCTTCACAGCTTCAAGGTCGCATGGAGCCAAGAAATGTGTGCACTCCG
CGAGAGTAGTTACTGCAGAGTGCCTCGCGTGATTTTTCTACAGGAGATCACCAGGCAATC
AGCTTAACTGTTCAATTAAGTTGTTTATCTAAATAACTACTCCCTTGGCAGTCAGGCGAG
TAGCTTGATAGCATGTTAGATCTTTAGGAGCTTCTTTTGTGTTTCAAACAACTATGAACG
TGTTTGCAATTGAAGCATCTTATTTTCTTATGACAGTACAGGCAAGTTACTCAAAAAAAA
clustalw multiple alignements is not computed in this case