cluster # 6892

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Oryza sativa
cluster # 6892 cluster # 6892 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6892#0 length = 844 sequences # 4
consensusID : consensus_6892#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 844
fasta sequence
                              [CGCGAGCGAGCGAGTGCTTCCGCCGCATCCATCCTGATCTCTGAGGATTATTCCAACTTCTGAGGCAAGATGTCGTACATGCGAGGCGACCTGCTCACTAGGACACGGAAGCTGGTGAAGGGCATGGCCAAACCTGCCCCTGCATGGCTCAAGGCCATGGAGCAGGCACCTCCACCCACATTCCCTCGTACTGATGGGAAGATTAAGAAGATCGAGTTGCCAGAAGATGTTTATGTCAAGAGGTTCTTCAAAAAGCATCCAGATTCACTCTACCATGACGCAATCAAGA--TAAGCGGGNTTTGATCCACCGCCAGCACGAGTTTTTGCTT-GGCGTGTCTT-AGAATTG-AAAAAGGACGGAGTCAATGAAGAT-GATGCAATGGCTGTA-GC-AGATATGGAGTAT-GCA-GCAGAGAAGAAAGCCA-AG-AAGAAA-GCATACAAGGAGCTGAAAGAAATCGCGCGCATCGAAGGAAAAAGGCCACCCCCGAATCCATACCCAAGCGCCATCAAAGAAATACAGGCAGAGGAAAAGAAGTATGTGAGAGAGCGTTT-CCATAACCCCAAGATACTTGAGATTGTTAAGAAGAT-GAAAGAGGATAAGGAGTTA-TTTTTAAAGATAGAGAAGCATCCAGGGCTGGGCAGTAGCTGGTATATTGCCATACT-GTTGGTCAACTAGGTATTGTTGCTTATGATATTAACAAGCTGCTGTTTGAATCTGACTATTGTTTAACTTTCTCAT-GAAGAAATAATAGTTGCACAAATCGCGTTTGGTAGGTAGCAAACAGAAAAATCATACCAGTTTTGATATATGTTTGCTATGTGGATGCAAAGGCGACTTCATTAGAAAAAA]

[+] EMBL CF313893             [CGCGAGCGAGCGAGTGCTTCCGCCGCATCCATCCTGATCTCTGAGGATTATTCCAACTTCTGAGGCAAGATGTCGTACATGCGAGGCGACCTGCTCACTAGGACACGGAAGCTGGTGAAGGGCATGGCCAAACCTGCCCCTGCATGGCTCAAGGCCATGGAGCAGGCACCTCCACCCACATTCCCTCGTACTGATGGGAAGATTAAGAAGATCGAGTTGCCAGAAGATGTTTATGTCAAGAGGTTCTTCAAAAAGCATCCAGATTCACTCTACCATGACGCAATCAAGA  TAAGCGGGNTTTGATCCACCGCCAGCACGAGTTTTTGCTT GGCGTGTCTT AGAATTG AAAAAGGACGGAGTCAATGAAGAT GATGCAATGGCTGTA GC AGATATGGAGTAT GCA GCAGAGAAGAAAGCCA AG AAGAAA GCATACAAGGAGCTGAAAGAAATCGCGCGCATCGAAGGAAAAAGGCCACCCCCGAATCCATACCCAAGCGCCATCAAAGAAATACAGGCAGAGGAAAAGAAGTATGTGAGAGAGCGTTT CCATAACCCCAAG                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI796123             [                                                                                                                                                                                                                                                                                          ATCAAGAATTACCCGGGTTTTGATCCACC CCAGCACGAGTTTTTGCTTGGGCGTGTCTTGAGAATTGAAAAAAGGACGGAGTCAATGAAGATGGAT CAATGGCTGTACGCAAGATATGGAGTATCGCACGCAGAGAAGAAA CCATAGTAAGAAACGCATACAAGGAGCTGAAAGAAATCGCGCGCATCGAAGGAAAAAGGCCACCCCCGAATCCATACCCAAGC CCATTAAAGAAATACAGCCAGAGGAAAAGAAGTATGTGAGAGAGCGTTTGCCATAACCCCTAGATACTTGAGATTGTTAAGAAGATGGAAAGAGGATAAGGAGTTATTTTTTAAAGATAGAGAAGCATCCAGGGCTGGGCAGTAGCTGGTATATT CCATACTGGTTGGTCAACTAGGTATTGTTGCTTATGATATTAACAAGCTGCTGTTGGAATCg                                                                                                                                      ]
[-] EMBL CF313894             [                                                                                                                                                                                                                                                                                                                                                                             CAATGAAGAT GATGCAATGGCTGTA GC AGATATGGAGTAT GCA GCAGAGAAGAAAGCCA AG AAGAAA GCATACAAGGAGCTGAAAGAAATCGCGCGCATCGAAGGAAAAAGGCCACCCCCGAATCCATACCCAAGCGCCATCAAAGAAATACAGGCAGAGGAAAAGAAGTATGTGAGAGAGCGTTT CCATAACCCCAAGATACTTGAGATTGTTAAGAAGAT GAAAGAGGATAAGGAGTTA TTTTTAAAGATAGAGAAGCATCCAGGGCTGGGCAGTAGCTGGTATATTGCCATACT GTTGGTCAACTAGGTATTGTTGCTTATGATATTAACAAGCTGCTGTTTGAATCTGACTATTGTTTAACTTTCTCAT GAAGAAATAATAGTTGCACAAATCGCGTTTGGTAGGTAGCAAACAGAAAAATCATACCAGTTTTGATATATGTTTGCTATGTGGATGCAAAGGCGACTTCATTAGAAAAAA]
[+] EMBL OS1826A              [                                                                                                                                                                                                                                                                                                                                                                                                                                               G AAGAAA GCATACAAGGAGCTGAAAGAAATCGCGCGCATCGAAGGAAAAAGGCCACCCCCGAATCCATACCCAAGCGCCATCAAAGAAATACAGGCAGAGGAAAAGAAGTATGTNAGAGAGCGTTT CCATAACCCCAAGATACTTGAGATTGTTAAGAAGAT GAAAGAGGATAAGGAGTTATTTTTTAAAGATAGAGAAGCATCCAGGGCTGGGCAGTAGCTGGTATATTGCCATACT GTTGGTCAACTAGGTATTGTTGCTTATGATATTAACAAGCTGCTGTTTGAATCTGACTATTGTTTAACTTTCTCATGGAAGAAATAATAGTTGCACAAATCGCGTTTGGTAGGTAGCAAACAGAAAAATCATACCAGTTTTGATATATGTTTGCTATGTGGn                          ]




>consensus_6892#0
CGCGAGCGAGCGAGTGCTTCCGCCGCATCCATCCTGATCTCTGAGGATTATTCCAACTTC
TGAGGCAAGATGTCGTACATGCGAGGCGACCTGCTCACTAGGACACGGAAGCTGGTGAAG
GGCATGGCCAAACCTGCCCCTGCATGGCTCAAGGCCATGGAGCAGGCACCTCCACCCACA
TTCCCTCGTACTGATGGGAAGATTAAGAAGATCGAGTTGCCAGAAGATGTTTATGTCAAG
AGGTTCTTCAAAAAGCATCCAGATTCACTCTACCATGACGCAATCAAGATAAGCGGGNTT
TGATCCACCGCCAGCACGAGTTTTTGCTTGGCGTGTCTTAGAATTGAAAAAGGACGGAGT
CAATGAAGATGATGCAATGGCTGTAGCAGATATGGAGTATGCAGCAGAGAAGAAAGCCAA
GAAGAAAGCATACAAGGAGCTGAAAGAAATCGCGCGCATCGAAGGAAAAAGGCCACCCCC
GAATCCATACCCAAGCGCCATCAAAGAAATACAGGCAGAGGAAAAGAAGTATGTGAGAGA
GCGTTTCCATAACCCCAAGATACTTGAGATTGTTAAGAAGATGAAAGAGGATAAGGAGTT
ATTTTTAAAGATAGAGAAGCATCCAGGGCTGGGCAGTAGCTGGTATATTGCCATACTGTT
GGTCAACTAGGTATTGTTGCTTATGATATTAACAAGCTGCTGTTTGAATCTGACTATTGT
TTAACTTTCTCATGAAGAAATAATAGTTGCACAAATCGCGTTTGGTAGGTAGCAAACAGA
AAAATCATACCAGTTTTGATATATGTTTGCTATGTGGATGCAAAGGCGACTTCATTAGAA
AAAA
clustalw multiple alignements is not computed in this case