cluster # 6904

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Oryza sativa
cluster # 6904 cluster # 6904 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6904#0 length = 2337 sequences # 4
consensusID : consensus_6904#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2337
fasta sequence
                              [GTTTGAAATTGCCTCATTCCTTTCAGCGTGATGATGATTCTGGCCCTGTTTTAATTGAAGAAGGGAATGACCCTCTGACTACTATATATCAGGCCCAACAGGGCTGGTCGACATACATGCCTAATGATTCTGGAGAAACTAATAACCATGGAGATATACCTCCTACACAAATCACTTCAATGGGAGCACACTTTGAGACCGAAGGCTACCTCAAGCAGCCTGATTCGTTTTCTGCAGAGCAAAAAATTTCGGAGTTTGCTGAGAAGCAAAGATCTGATTCTTGTGAGAGGGAATGTTCAGAAACTGAGACAGAAGATGATGCTGAACTTTTGCAAAGATATGCTAAGAGGCAATCCCCGGGGTCAGATGCATGCGATCCTTATTCCATTCAGGCTTCTAAAAAGTCAAGGCATGTGGATGGTGATGTTGCGGATGATATGGTGGCCTTCTCTACTGGTATTCCTCAACAAAATGTCTTAAAGGAGGAGGATGGTTCATCTGAGCTAGGTGTATCCCAGTGGCATATGAAAGGTAAACGCAACCAACGTAGTGCGTTGAAGAGGCCTATGGGTAAGACAGATGGAAATATATCGTTAGACAGATCTAATAGTTCACTGAAAGGGTCATTGTATAGGGTCAACGAAAGTAATCCGAATATGGAGAGTACTGGTGCATCCAGCCATCAGTATTTTGGTCGAAGTTTTTATCAGACCCAAGAGTTGGATTATGATTACGATAATGCAGATCTAACTAATAAAGCTAGGGGCCATGCAGAAGTTAGATATTATGGTAAAGACTACCCCCCATCTTTGACACCTACAAGGGATCTTGAACAGAGTTACACTTCTTTCAACAACACTGAAACTTATTGCAAGACTTCTCCACCAAATAAGAATGGAGATCAGATGTCTTCTCTTGGTAGGAAAGCATGCTTGGAAGGAGCTTCATTGTATCGACAAAATTATTCCTCCCAACTTGGTTACATGGGCCCAATGCTATTTAATGTTGACCTGAATGTACAGGCTGGCTATCAAGGGGAGCATGTTCCATTGGTTTCTTTGATGAGCAGACTGAATGGCAAAGCAATAGTTGGGCATCCTATCCAAATTGAAATACTTGAAGATGGTTCAACTGACCACCTTGTTTTGGCCAGTGATGATTTTCTGGAACATAGCACCTCTGCATCACCTGCTTGGCGTACAGGCAGAAGGACTGCTATGCCAAGAATTCCACGTTCTAATTCAACACGGGTGACCTTGGATGATGGTGACGATGAGGGCCTGTGGGATATGAATCCGCCCTTTAGTAGATCCTCCACCCCCTTCAATCAGCAGTTTAGGCTTTCAAAACGAAGCAACACCAGTTTTCGGAGCCCATTGTCACATAGATCTCAAAAGAAGCCCTCTAATTCCAAAAAAGGAAGCTCATCAAGTCAGAAAGTCAGAGCCCTTTCTTCCATTTCAATTGGAAAAAGGCATCACAGAGAAGGTCGTCAAGCAAAGCTGCACAATATTTTGGGTGATTTGATCAAACCAGAGGGAGCAATTCCACTTGTCACGTGTGTTCCTGCAAAGGTCGTCTTCAGTAGGATAATGGAAGCTGTTGGGAGGCCATCTCTTTCTATCGCTCACCGTGCCAGAGTGGCTAGTCCTGCCATACGGGATGCACAGCGTTAGCTTGCTATGGTTGGCATTGTTTGATCTGGTTCAGACTTTGCAACTTTTATATGTACATTCTCTGGCATTGCTGTGGCATAATGTTCATACATCAAACGTGCTCATCTCTGACTGCAGTGGATGACGTAAAGATTGAGAACCATTAGTTGTATTCCATTCCAAATGCCATATCTTGATTAGGCAATCTGATGGATACCTTCTCCGGAGAATAGCCAACCACCTCCCTGAAGTAGCTTGTTCGCAGAGCAATAAGAATGGTGACCACTACTTGGA-TTGGCTGTCTCCTGTACTGTAAAGTACTAACTTCAGCATTTTATACCATGTCTGTTTAGTTGAATTTTTACA-TACATAGCCAACAATCAATAGGTTGTCATGTATA-TTGCTACACCTATATTCAGATGTAGTAGTTATTTACTGTTTAGAGGAACCTGTTTCACCTTTATGTTCAGAAGCACATATTTAGGTAGTTGATGTAACATATCAGAA-CAGGTACACCAAATGATGTAAACAGTCTATCTTCGCTGTTAACCGTCGTATCACAGTATATGTCAATAACCAGATTTGGTAGTTCTGAAAACTTCTACAGTGTGTTATATATGGCATTCTTTGTGTCAAGAACAGATCTAGGATTGTGATATACTTCGCATACATCTTCATACAT]

[+] EMBL AK072303             [GTTTGAAATTGCCTCATTCCTTTCAGCGTGATGATGATTCTGGCCCTGTTTTAATTGAAGAAGGGAATGACCCTCTGACTACTATATATCAGGCCCAACAGGGCTGGTCGACATACATGCCTAATGATTCTGGAGAAACTAATAACCATGGAGATATACCTCCTACACAAATCACTTCAATGGGAGCACACTTTGAGACCGAAGGCTACCTCAAGCAGCCTGATTCGTTTTCTGCAGAGCAAAAAATTTCGGAGTTTGCTGAGAAGCAAAGATCTGATTCTTGTGAGAGGGAATGTTCAGAAACTGAGACAGAAGATGATGCTGAACTTTTGCAAAGATATGCTAAGAGGCAATCCCCGGGGTCAGATGCATGCGATCCTTATTCCATTCAGGCTTCTAAAAAGTCAAGGCATGTGGATGGTGATGTTGCGGATGATATGGTGGCCTTCTCTACTGGTATTCCTCAACAAAATGTCTTAAAGGAGGAGGATGGTTCATCTGAGCTAGGTGTATCCCAGTGGCATATGAAAGGTAAACGCAACCAACGTAGTGCGTTGAAGAGGCCTATGGGTAAGACAGATGGAAATATATCGTTAGACAGATCTAATAGTTCACTGAAAGGGTCATTGTATAGGGTCAACGAAAGTAATCCGAATATGGAGAGTACTGGTGCATCCAGCCATCAGTATTTTGGTCGAAGTTTTTATCAGACCCAAGAGTTGGATTATGATTACGATAATGCAGATCTAACTAATAAAGCTAGGGGCCATGCAGAAGTTAGATATTATGGTAAAGACTACCCCCCATCTTTGACACCTACAAGGGATCTTGAACAGAGTTACACTTCTTTCAACAACACTGAAACTTATTGCAAGACTTCTCCACCAAATAAGAATGGAGATCAGATGTCTTCTCTTGGTAGGAAAGCATGCTTGGAAGGAGCTTCATTGTATCGACAAAATTATTCCTCCCAACTTGGTTACATGGGCCCAATGCTATTTAATGTTGACCTGAATGTACAGGCTGGCTATCAAGGGGAGCATGTTCCATTGGTTTCTTTGATGAGCAGACTGAATGGCAAAGCAATAGTTGGGCATCCTATCCAAATTGAAATACTTGAAGATGGTTCAACTGACCACCTTGTTTTGGCCAGTGATGATTTTCTGGAACATAGCACCTCTGCATCACCTGCTTGGCGTACAGGCAGAAGGACTGCTATGCCAAGAATTCCACGTTCTAATTCAACACGGGTGACCTTGGATGATGGTGACGATGAGGGCCTGTGGGATATGAATCCGCCCTTTAGTAGATCCTCCACCCCCTTCAATCAGCAGTTTAGGCTTTCAAAACGAAGCAACACCAGTTTTCGGAGCCCATTGTCACATAGATCTCAAAAGAAGCCCTCTAATTCCAAAAAAGGAAGCTCATCAAGTCAGAAAGTCAGAGCCCTTTCTTCCATTTCAATTGGAAAAAGGCATCACAGAGAAGGTCGTCAAGCAAAGCTGCACAATATTTTGGGTGATTTGATCAAACCAGAGGGAGCAATTCCACTTGTCACGTGTGTTCCTGCAAAGGTCGTCTTCAGTAGGATAATGGAAGCTGTTGGGAGGCCATCTCTTTCTATCGCTCACCGTGCCAGAGTGGCTAGTCCTGCCATACGGGATGCACAGCGTTAGCTTGCTATGGTTGGCATTGTTTGATCTGGTTCAGACTTTGCAACTTTTATATGTACATTCTCTGGCATTGCTGTGGCATAATGTTCATACATCAAACGTGCTCATCTCTGACTGCAGTGGATGACGTAAAGATTGAGAACCATTAGTTGTATTCCATTCCAAATGCCATATCTTGATTAGGCAATCTGATGGATACCTTCTCCGGAGAATAGCCAACCACCTCCCTGAAGTAGCTTGTTCGCAGAGCAATAAGAATGGTGACCACTACTTGGA TTGGCTGTCTCCTGTACTGTAAAGTACTAACTTCAGCATTTTATACCATGTCTGTTTAGTTGAATTTTTACA TACATAGCCAACAATCAATAGGTTGTCATGTATA TTGCTACACCTATATTCAGATGTAGTAGTTATTTACTGTTTAGAGGAACCTGTTTCACCTTTATGTTCAGAAGCACATATTTAGGTAGTTGATGTAACATATCAGAA CAGGTACACCAAATGATGTAAACAGTCTATCTTCGCTGTTAACCGTCGTATCACAGTATATGTCAATAACCAGATTTGGTAGTTCTGAAAACTTCTACAGTGTGTTATATATGGCATTCTTTGTGTCAAGAACAGATCTAGGATTGTGATATACTTCGCATACATCTTCATACAT]
[+] EMBL CB671498             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGGATGGTTCATCTGAGCTAGGTGTATCCCAGTGGCATATGAAAGGTAAACGCAACCAACGTAGTGCGTTGAAGAGGCCTATGGGTAAGACAGATGGAAATATATCGTTAGACAGATCTAATAGTTCACTGAAAGGGTCATTGTATAGGGTCAACGAAAGTAATCCGAATATGGAGAGTACTGGTGCATCCAGCCATCAGTATTTTGGTCGAAGTTTTTATCAGACCCAAGAGTTGGATTATGATTACGATAATGCAGATCTAACTAATAAAGCTAGGGGCCATGCAGAAGTTAGATATTATGGTAAAGACTACCCCCCATCTTTGACACCTACAAGGGATCTTGAACAGAGTTACACTTCTTTCAACAACACTGAAACTTATTGCAAGACTTCTCCACCAAATAAGAATGGAGATCAGATGTCTTCTCTTGGTAGGAAAGCATGCTTGGAAGGAGCTTCATTGTATCGACAAAATTATTCCTCCCAACTTGGTTACATGGGCCCAATGCTATTTAATGTTGACCTGAATGTACAGGCTGGCTATCAAGGGGAGCATGTTCCATTGGTTTCTTTGATGAGCAGACTGAATGGCAAAGCAATAGTTGGGCATCCTATCCAAATTGAAATACTTGAAGATGGTTCAACTGACCACCTTGTTTTGGCCAGTGATGATTTTCTGGAACATAGCACCTCTGCATCACCTGCTTGGCGTACAGGCAGAAGGACTGCTATGCCAAGAATTCCACGTTCTAATTCGACACGGGTGACCTTGGATGATGGTGACGATGAGGGCCTGTGGGATATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB671499             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGGTGATTTGATCAAACCAGAGGGAGCAATTCCACTTGTCACGTGTGTTCCTGCAAAGGTCGTCTTCAGTAGGATAATGGAAGCTGTTGGGAGGCCATCTCTTTCTATCGCTCACCGTGCCAGAGTGGCTAGTCCTGCCATACGGGATGCACAGCGTTAGCTTGCTATGGTTGGCATTGTTTGATCTGGTTCAGACTTTGCAACTTTTATATGTACATTCTCTGGCATTGCTGTGGCATAATGTTCATACATCAAACGTGCTCATCTCTGACTGCAGTGGATGACGTAAAGATTGAGAACCATTAGTTGTATTCCATTCCAAATGCCATATCTTGATTAGGCAATCTGATGGATACCTTCTCCGGAGAATAGCCAACCACCTCCCTGAAGTAGCTTGTTCGCAGAGCAATAAGAATGGTGACCACTACTTGGA TTGGCTGTCTCCTGTACTGTAAAGTACTAACTTCAGCATTTTATACCATGTCTGTTTAGTTGAATTTTTACA TACATAGCCAACAATCAATAGGTTGTCATGTATA TTGCTACACCTATATTCAGATGTAGTAGTTATTTACTGTTTAGAGGAACCTGTTTCACCTTTATGTTCAGAAGCACATATTTAGGTAGTTGATGTAACATATCAGAA CAGGTACACCAAATGATGTAAACAGTCTATCTTCGCTGTTAACCGTCGTATCACAGTATATGTCAATAACCAGATTTGGTAGTTCTGAAAACTTCTACAGTGTGTTATATATGGCATTCTTTGTGTCAAGAACAGATAGAGGATTGTGATATACTTCGCATACATCTTCA     ]
[+] EMBL BI800257             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAGAGCAATAAGAATGGTGACCACTACTTGGACTTGGCTGTCTCCTGTACTGTAAAGTACTAACTTCAGCATTTTATACCATGTCTGTTTAGTTGAATTTTTACACTACATAGCCAACAATCAATAGGTTGTCATGTATACTTGCTACACCTATATTCAGATGTAGTAGTTATTTACTGTTTAGAGGAACCTGTTTCACCTTTATGTTCAGAAGCACATATTTAGGTAGTTGATGTAACATATCAGAACCAGGTACACCAATCGATGTAAACAGTCTATCTTCGCTGTTAACCGTCGTATCACAGTAaaaaaaaa                                                                                                             ]




>consensus_6904#0
GTTTGAAATTGCCTCATTCCTTTCAGCGTGATGATGATTCTGGCCCTGTTTTAATTGAAG
AAGGGAATGACCCTCTGACTACTATATATCAGGCCCAACAGGGCTGGTCGACATACATGC
CTAATGATTCTGGAGAAACTAATAACCATGGAGATATACCTCCTACACAAATCACTTCAA
TGGGAGCACACTTTGAGACCGAAGGCTACCTCAAGCAGCCTGATTCGTTTTCTGCAGAGC
AAAAAATTTCGGAGTTTGCTGAGAAGCAAAGATCTGATTCTTGTGAGAGGGAATGTTCAG
AAACTGAGACAGAAGATGATGCTGAACTTTTGCAAAGATATGCTAAGAGGCAATCCCCGG
GGTCAGATGCATGCGATCCTTATTCCATTCAGGCTTCTAAAAAGTCAAGGCATGTGGATG
GTGATGTTGCGGATGATATGGTGGCCTTCTCTACTGGTATTCCTCAACAAAATGTCTTAA
AGGAGGAGGATGGTTCATCTGAGCTAGGTGTATCCCAGTGGCATATGAAAGGTAAACGCA
ACCAACGTAGTGCGTTGAAGAGGCCTATGGGTAAGACAGATGGAAATATATCGTTAGACA
GATCTAATAGTTCACTGAAAGGGTCATTGTATAGGGTCAACGAAAGTAATCCGAATATGG
AGAGTACTGGTGCATCCAGCCATCAGTATTTTGGTCGAAGTTTTTATCAGACCCAAGAGT
TGGATTATGATTACGATAATGCAGATCTAACTAATAAAGCTAGGGGCCATGCAGAAGTTA
GATATTATGGTAAAGACTACCCCCCATCTTTGACACCTACAAGGGATCTTGAACAGAGTT
ACACTTCTTTCAACAACACTGAAACTTATTGCAAGACTTCTCCACCAAATAAGAATGGAG
ATCAGATGTCTTCTCTTGGTAGGAAAGCATGCTTGGAAGGAGCTTCATTGTATCGACAAA
ATTATTCCTCCCAACTTGGTTACATGGGCCCAATGCTATTTAATGTTGACCTGAATGTAC
AGGCTGGCTATCAAGGGGAGCATGTTCCATTGGTTTCTTTGATGAGCAGACTGAATGGCA
AAGCAATAGTTGGGCATCCTATCCAAATTGAAATACTTGAAGATGGTTCAACTGACCACC
TTGTTTTGGCCAGTGATGATTTTCTGGAACATAGCACCTCTGCATCACCTGCTTGGCGTA
CAGGCAGAAGGACTGCTATGCCAAGAATTCCACGTTCTAATTCAACACGGGTGACCTTGG
ATGATGGTGACGATGAGGGCCTGTGGGATATGAATCCGCCCTTTAGTAGATCCTCCACCC
CCTTCAATCAGCAGTTTAGGCTTTCAAAACGAAGCAACACCAGTTTTCGGAGCCCATTGT
CACATAGATCTCAAAAGAAGCCCTCTAATTCCAAAAAAGGAAGCTCATCAAGTCAGAAAG
TCAGAGCCCTTTCTTCCATTTCAATTGGAAAAAGGCATCACAGAGAAGGTCGTCAAGCAA
AGCTGCACAATATTTTGGGTGATTTGATCAAACCAGAGGGAGCAATTCCACTTGTCACGT
GTGTTCCTGCAAAGGTCGTCTTCAGTAGGATAATGGAAGCTGTTGGGAGGCCATCTCTTT
CTATCGCTCACCGTGCCAGAGTGGCTAGTCCTGCCATACGGGATGCACAGCGTTAGCTTG
CTATGGTTGGCATTGTTTGATCTGGTTCAGACTTTGCAACTTTTATATGTACATTCTCTG
GCATTGCTGTGGCATAATGTTCATACATCAAACGTGCTCATCTCTGACTGCAGTGGATGA
CGTAAAGATTGAGAACCATTAGTTGTATTCCATTCCAAATGCCATATCTTGATTAGGCAA
TCTGATGGATACCTTCTCCGGAGAATAGCCAACCACCTCCCTGAAGTAGCTTGTTCGCAG
AGCAATAAGAATGGTGACCACTACTTGGATTGGCTGTCTCCTGTACTGTAAAGTACTAAC
TTCAGCATTTTATACCATGTCTGTTTAGTTGAATTTTTACATACATAGCCAACAATCAAT
AGGTTGTCATGTATATTGCTACACCTATATTCAGATGTAGTAGTTATTTACTGTTTAGAG
GAACCTGTTTCACCTTTATGTTCAGAAGCACATATTTAGGTAGTTGATGTAACATATCAG
AACAGGTACACCAAATGATGTAAACAGTCTATCTTCGCTGTTAACCGTCGTATCACAGTA
TATGTCAATAACCAGATTTGGTAGTTCTGAAAACTTCTACAGTGTGTTATATATGGCATT
CTTTGTGTCAAGAACAGATCTAGGATTGTGATATACTTCGCATACATCTTCATACAT
clustalw multiple alignements is not computed in this case