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Oryza sativa
cluster # 6946 cluster # 6946       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6946#0 length = 1072 sequences # 4  
consensusID : consensus_6946#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1072
fasta sequence 
                              [TTCGGACGAGCGCCACCACCGGACACCGGAGGAGCATCGAGGAATGAGGAAAGATATGCGAGGCGGTTCGGCTCTGCCTCTGCTGCTGCTGCTGCTGCTGTGCTGCTCGCTCGCCGCCGTGCAGCCGGCGCGCGCGCTCTTCCACCTGCGCGGCGCGGGCGCGTACGTCGAACAGCTTCGCGGCGGCGGTGGCTACGGCGAGGAGAAGGTACCGATGACGGTCGTGGTGCCGGACTACTCGCCGCGGCCGGCTCCGTTCGGGGCGCCCGCGCCCGCGCCGGCGATACCGCCGTTGCCTGGCTCGGACGACGGCGGCGGCGGCGACATGCCGACGCTGCCGTCTGAGCGGCGGAGCCCGCGCGGCGCGCTTCCCGGAGGCAATGCGGGTGCTGAAGCCAACGCCGGCGCGCCGTCGCCTGCCGCCGCGGCGGCAAGCACGAGCACGGCCTTCATCAGCAGCAGCCCGGCGGTGCCGCTCCCCGCCGGCGTCACCGACTCCGCCACCGTCCTGCCCATGCCCACCCCCGGCCAGGAACAGCAGCAGGTAACCAACCAACCAACCAATCAAACAACTGTTCATCACCTCTTTGGATGCCAATGCCATCTCCTCCTCTGATAAACTCCAAAGCAACCCAGCAAACATCTGATTCATTTCATTTCTT-TTAGTTTCTTGTAACTCCCCAAAAACCTTTTT-CTCAGAGCTTTCTTGCTGCATCTTTGCGAGCTCATATTACTTTTCCTTTTCCCTTTGCATCCATCATACCTTTTTCTAGCCTAGTAGCTCGCTCTCTGACTGACGACGAACTTTTGCAATTTGCTCCATTGGTTGGTGGTGACGCCTTTTGCAGGCCGTGGGGATGGGCACCCTGCCTCGAGCTAGGACGGTGCAGGTGCAGCTCGCCGTTCCTCTCGTCATGATGCTGTTCTTTTCGGCTCTCTGGTAGTAGAGTAGAAGTACAACTAGTAGTAATAGTTCTTTTTTACTATTGTAATCACTAGTGTTTACTGCTTTCTCCTCTGTAGATTGCTCGAAGTCCTAACCATGCGTTTGTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK111485             [TTCGGACGAGCGCCACCACCGGACACCGGAGGAGCATCGAGGAATGAGGAAAGATATGCGAGGCGGTTCGGCTCTGCCTCTGCTGCTGCTGCTGCTGCTGTGCTGCTCGCTCGCCGCCGTGCAGCCGGCGCGCGCGCTCTTCCACCTGCGCGGCGCGGGCGCGTACGTCGAACAGCTTCGCGGCGGCGGTGGCTACGGCGAGGAGAAGGTACCGATGACGGTCGTGGTGCCGGACTACTCGCCGCGGCCGGCTCCGTTCGGGGCGCCCGCGCCCGCGCCGGCGATACCGCCGTTGCCTGGCTCGGACGACGGCGGCGGCGGCGACATGCCGACGCTGCCGTCTGAGCGGCGGAGCCCGCGCGGCGCGCTTCCCGGAGGCAATGCGGGTGCTGAAGCCAACGCCGGCGCGCCGTCGCCTGCCGCCGCGGCGGCAAGCACGAGCACGGCCTTCATCAGCAGCAGCCCGGCGGTGCCGCTCCCCGCCGGCGTCACCGACTCCGCCACCGTCCTGCCCATGCCCACCCCCGGCCAGGAACAGCAGCAGGTAACCAACCAACCAACCAATCAAACAACTGTTCATCACCTCTTTGGATGCCAATGCCATCTCCTCCTCTGATAAACTCCAAAGCAACCCAGCAAACATCTGATTCATTTCATTTCTT TTAGTTTCTTGTAACTCCCCAAAAACCTTTTT CTCAGAGCTTTCTTGCTGCATCTTTGCGAGCTCATATTACTTTTCCTTTTCCCTTTGCATCCATCATACCTTTTTCTAGCCTAGTAGCTCGCTCTCTGACTGACGACGAACTTTTGCAATTTGCTCCATTGGTTGGTGGTGACGCCTTTTGCAGGCCGTGGGGATGGGCACCCTGCCTCGAGCTAGGACGGTGCAGGTGCAGCTCGCCGTTCCTCTCGTCATGATGCTGTTCTTTTCGGCTCTCTGGTAGTAGAGTAGAAGTACAACTAGTAGTAATAGTTCTTTTTTACTATTGTAATCACTAGTGTTTACTGCTTTCTCCTCTGTAGATTGCTCGAAGTCCTAACCATGCGTTTG                     ]
[+] EMBL AU069057             [              ACCACCGGACACCGGAGGAGCATCGAGGAATGAGGAAAGATATGCNAGGCGGTTCGGCTCTGCCTCTGCTGCTGCTGCTGCTGCTGTNCTGCTCGCTCGCCGNCGTGCAGCCGGCGCGNGCNCTCTTCCACCTGCNAGGCGCGGGCGCGTACGTAGAACAGNTTCGCGGCGGCGNTGGCTACGGCGAGGAGAAGGTANCGATGACGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSS0854A             [                                    TCGAGGAATGAGGAAAGATATGCGAGGCGNTTCGGCTCTGNCNCTGCTGCTGCTGCTGCTGCTGTGCTGCTCGCTCGCCGTCGTGCAGCCGACGCGCGCGCTCTTCCACCTNCGCGGCGCGGGCGCGTACGNCGAACAGCTTCGCGGCGGCGGTGGCTACGNCGAGGAGAAGGTACCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU166887             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CATGTGATTCATTTCANTTCTTGTTAGTTTCTTGTAACTCCCCAAAAACCTTTTTNTTCAAAGCTTTTTTGCTGCATCTTTGCGAGCTCATATTACTTTTCCTTTTCCCTTTGCATCCATCATACCTTTTTCTAGCCTAGTAGCTCGCTNTNTGACTGACGACGAACTTTTGCAATTTGCTCCATTGGTTGGTGGTGACGCCTTTTGCAGGCCGTGGGGATGGGCACCCTGCCTCGAGCCAGGACGGTGCAGGTGCAGCTCGCCGTTCCTCTCGTCATGATGCTGTTCTTTTCGGCTCTCTGGTAGTAGAGTAGAAGTACAACTAGTAGTAATAGTTCTTTTTTACTATTGTAATCACTAGTGTTTACTGCTTTNTCCTCTGTAGATTGCTCGAAGTCCTAACCATGCGTTTGTAAAAAAAAAAAAAAAAAAAA]




>consensus_6946#0
TTCGGACGAGCGCCACCACCGGACACCGGAGGAGCATCGAGGAATGAGGAAAGATATGCG
AGGCGGTTCGGCTCTGCCTCTGCTGCTGCTGCTGCTGCTGTGCTGCTCGCTCGCCGCCGT
GCAGCCGGCGCGCGCGCTCTTCCACCTGCGCGGCGCGGGCGCGTACGTCGAACAGCTTCG
CGGCGGCGGTGGCTACGGCGAGGAGAAGGTACCGATGACGGTCGTGGTGCCGGACTACTC
GCCGCGGCCGGCTCCGTTCGGGGCGCCCGCGCCCGCGCCGGCGATACCGCCGTTGCCTGG
CTCGGACGACGGCGGCGGCGGCGACATGCCGACGCTGCCGTCTGAGCGGCGGAGCCCGCG
CGGCGCGCTTCCCGGAGGCAATGCGGGTGCTGAAGCCAACGCCGGCGCGCCGTCGCCTGC
CGCCGCGGCGGCAAGCACGAGCACGGCCTTCATCAGCAGCAGCCCGGCGGTGCCGCTCCC
CGCCGGCGTCACCGACTCCGCCACCGTCCTGCCCATGCCCACCCCCGGCCAGGAACAGCA
GCAGGTAACCAACCAACCAACCAATCAAACAACTGTTCATCACCTCTTTGGATGCCAATG
CCATCTCCTCCTCTGATAAACTCCAAAGCAACCCAGCAAACATCTGATTCATTTCATTTC
TTTTAGTTTCTTGTAACTCCCCAAAAACCTTTTTCTCAGAGCTTTCTTGCTGCATCTTTG
CGAGCTCATATTACTTTTCCTTTTCCCTTTGCATCCATCATACCTTTTTCTAGCCTAGTA
GCTCGCTCTCTGACTGACGACGAACTTTTGCAATTTGCTCCATTGGTTGGTGGTGACGCC
TTTTGCAGGCCGTGGGGATGGGCACCCTGCCTCGAGCTAGGACGGTGCAGGTGCAGCTCG
CCGTTCCTCTCGTCATGATGCTGTTCTTTTCGGCTCTCTGGTAGTAGAGTAGAAGTACAA
CTAGTAGTAATAGTTCTTTTTTACTATTGTAATCACTAGTGTTTACTGCTTTCTCCTCTG
TAGATTGCTCGAAGTCCTAACCATGCGTTTGTAAAAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)