cluster # 6968

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Oryza sativa
cluster # 6968 cluster # 6968 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6968#0 length = 720 sequences # 4

consensusID : consensus_6968#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 720
fasta sequence

                              [GCCTCCGACTCCCCTCCCGTCTCCTCGCGCCGCCGCCGCCGCCGCCGAGCAGCGCCGATCCCCACCCACCCCGGCGGGCAAGCGGCGCCGGCGTCGTCCTGCTCCCCACACCCAGCCGCCGGTGGGCACACGCACAGAGAGATCCTAGCAACTATGGTGATCCCTCCACCGGAAAGGGCGGCTAGGATCACGCGCTTTCTGAAGCCCTACCTTCTGAGGATGCATTTCTCGAACAAGTATGTATCCGCTCAGGTGGTTCACACCCCAACGGCGACGGTCGCCTGTTCCGCGAGCTCGCAGGAGAAGCTGCTGAGGCCGAACATGGAGTCCACTCGCGATGTCGCTGCCGCTGCCAAGATCGGTAAGCTGCTCGGCGAGCGGCTGCTGCAGAAGGGCATACCCGCTGTGTGCATCCACATGAAGAGAGAGCAGAAGTACCATGGGAAGGTCAGGGCTGTCATTGACTCTGTTAGAGAAGCTGGAGTCAAGCTGTTGTAGTCTCTAAAACAGTAGAATCTTTTATTAAAATTTCTGCAAGCTTGTTCCTCTGAATCTCAGGCAAAATCTGAAAGATGTCGGATCAGACAGGAAATTTTCATTTCGGTATTGAGGGCTAGATGGCCTATGTGGAGATGTTCCTGGTGAATAAAGGATTTTGTACTATTGACTACTGGGAC-AAAAAAAGTTATTTTATCATCGGTAACTTTACTCAAAAAAAAA]

[+] EMBL AK063884             [GCCTCCGACTCCCCTCCCGTCTCCTCGCGCCGCCGCCGCCGCCGCCGAGCAGCGCCGATCCCCACCCACCCCGGCGGGCAAGCGGCGCCGGCGTCGTCCTGCTCCCCACACCCAGCCGCCGGTGGGCACACGCACAGAGAGATCCTAGCAACTATGGTGATCCCTCCACCGGAAAGGGCGGCTAGGATCACGCGCTTTCTGAAGCCCTACCTTCTGAGGATGCATTTCTCGAACAAGTATGTATCCGCTCAGGTGGTTCACACCCCAACGGCGACGGTCGCCTGTTCCGCGAGCTCGCAGGAGAAGCTGCTGAGGCCGAACATGGAGTCCACTCGCGATGTCGCTGCCGCTGCCAAGATCGGTAAGCTGCTCGGCGAGCGGCTGCTGCAGAAGGGCATACCCGCTGTGTGCATCCACATGAAGAGAGAGCAGAAGTACCATGGGAAGGTCAGGGCTGTCATTGACTCTGTTAGAGAAGCTGGAGTCAAGCTGTTGTAGTCTCTAAAACAGTAGAATCTTTTATTAAAATTTCTGCAAGCTTGTTCCTCTGAATCTCAGGCAAAATCTGAAAGATGTCGGATCAGACAGGAAATTTTCATTTCGGTATTGAGGGCTAGATGGCCTATGTGGAGATGTTCCTGGTGAATAAAGGATTTTGTACTATTGACTACTGGGAC AAAAAAAGTTATTTTATCATCGGT                   ]
[+] EMBL AK099373             [                  GTCTCCTCGCGCCGCCGCCGCCGCCGCCGAGCAGCGCCGATCCCCACCCACCCCGGCGGGCAAGCGGCGCCGGCGTCGTCCTGCTCCCCACACCCAGCCGCCGGTGGGCACACGCACAGAGAGATCCTAGCAACTATGGTGATCCCTCCACCGGAAAGGGCGGCTAGGATCACGCGCTTTCTGAAGCCCTACCTTCTGAGGATGCATTTCTCGAACAAGTATGTATCCGCTCAGGTGGTTCACACCCCAACGGCGACGGTCGCCTGTTCCGCGAGCTCGCAGGAGAAGCTGCTGAGGCCGAACATGGAGTCCACTCGCGATGTCGCTGCCGCTGCCAAGATCGGTAAGCTGCTCGGCGAGCGGCTGCTGCAGAAGGGCATACCCGCTGTGTGCATCCACATGAAGAGAGAGCAGAAGTACCATGGGAAGGTCAGGGCTGTCATTGACTCTGTTAGAGAAGCTGGAGTCAAGCTGTTGTAGTCTCTAAAACAGTAGAATCTTTTATTAAAATTTCTGCAAGCTTGTTCCTCTGAATCTCAGGCAAAATCTGAAAGATGTCGGATCAGACAGGAAATTTTCATTTCGGTATTGAGGGCTAGATGGCCTATGTGGAGATGTTCCTGGTGAATAAAGGATTTTGTACTATT                                                        ]
[+] EMBL AU078302             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGAAAGATGTCGGATCAGACAGGAAATTTTCATTTCGGTATTGAGGGCTAGATGGCCTATGTGGAGATGTTCCTGGTGAATAAAGGATTTTGTACTATTGACTACTGGGACAAAAAAAAGTTATTTTATCATCGGTAACTTTACTCAAAAAAAAA]
[+] EMBL AU176445             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAAAGATGTCGGATCAGACAGGAAATTTTCATTTCGGTATTGAGGGCTAGATGGCCTATGTGGAGATGTTCCTGGTGAATAAAGGATTTTGTACTATTGACTACTGGGACAAAAAAAAGTTATTTTATCATCGGTAACTTTACTCAAAAAAAAA]




>consensus_6968#0
GCCTCCGACTCCCCTCCCGTCTCCTCGCGCCGCCGCCGCCGCCGCCGAGCAGCGCCGATC
CCCACCCACCCCGGCGGGCAAGCGGCGCCGGCGTCGTCCTGCTCCCCACACCCAGCCGCC
GGTGGGCACACGCACAGAGAGATCCTAGCAACTATGGTGATCCCTCCACCGGAAAGGGCG
GCTAGGATCACGCGCTTTCTGAAGCCCTACCTTCTGAGGATGCATTTCTCGAACAAGTAT
GTATCCGCTCAGGTGGTTCACACCCCAACGGCGACGGTCGCCTGTTCCGCGAGCTCGCAG
GAGAAGCTGCTGAGGCCGAACATGGAGTCCACTCGCGATGTCGCTGCCGCTGCCAAGATC
GGTAAGCTGCTCGGCGAGCGGCTGCTGCAGAAGGGCATACCCGCTGTGTGCATCCACATG
AAGAGAGAGCAGAAGTACCATGGGAAGGTCAGGGCTGTCATTGACTCTGTTAGAGAAGCT
GGAGTCAAGCTGTTGTAGTCTCTAAAACAGTAGAATCTTTTATTAAAATTTCTGCAAGCT
TGTTCCTCTGAATCTCAGGCAAAATCTGAAAGATGTCGGATCAGACAGGAAATTTTCATT
TCGGTATTGAGGGCTAGATGGCCTATGTGGAGATGTTCCTGGTGAATAAAGGATTTTGTA
CTATTGACTACTGGGACAAAAAAAGTTATTTTATCATCGGTAACTTTACTCAAAAAAAAA

clustalw multiple alignements is not computed in this case