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Oryza sativa
cluster # 6975 cluster # 6975       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6975#0 length = 3220 sequences # 2  
 consensus_6975#1 length = 540 sequences # 2  
consensusID : consensus_6975#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3220
fasta sequence 
                              [CTTCCGTCTCGCCCAAATCGGCGCACCACCACCGCCCCGCCGTCCACGAATCGAACTGACCGGAGAGATCTCGCGATCCCCTCCCCACCCCTTCCTGCGCCGGTGGCGACCATGTCCACGGCGGCGCGGCGCGGCCACCCGCCGCCGCACGAGAACGGCGTGGGCGGGCACGCCGACGACGAGCCAGACGAGGACGGCGAGGAGGAGGAGGAGGAGGGGGAGGGGGAGGTGGAGGATGATGAGGAGGAGGAGCCGCGGCTCAAGTACCAGCGGCTGGGCGGGAGCGTCCCCGCGATCGTCTCCACCGACGCCGCCGCGGCCATCGCCGTCGCCGACCGCATGGTCGCGCTCGGCACGCACAACGGCACCCTCCACATCCTCGACTTCCAGGGTAATCAGGTAAAGGAAATTGCTGCTCACACAGCAACTATCAACGACATCAGTTTTGATGCAGACGGTGAATATATAGGAAGCTGCTCTGATGATGGGACTGTAGTAATAAGCAGCCTCTTCACTGATGAAAAACTGAAGTTTGAGTACCATCAACCCATGAAAGCAATTGCCTTAGACCCTAATTATTACAACAACTATAGAAGGTTCGCTACAGGGGGTTTAGCAGGTCAAGTACTTGTGCTGACAAAAAAGTCGTGGGGAGGTGGCTACCATAAAAAGGTTCTGCGTGATGGCGAAGGACCAATCCATTCTATGAAATGGAGGACAGACCTCCTTGCCTGGGCTAACGATGCAGGGGTAAAAGTGCATGATATGAAGACAGACAAAGGAATCGCGTTTATAGAGAGGCCAAAAGGAATTCCTCGGCCAGAGTTTTTACTTCCTCAGTTGGTCTGGCAGGATGATACCATCTTAGTTATTGGATGGGGAACAAGTGTCAAGATTGCAGCAATTCGAACAGATTCATCTCAAGGACTCAATGGCATACAGAGGAGTATCACTGCAAGTAATGAGAAGTACGTGGATATTGTGGGTTCGTTCCAAACAGGCTATCACATATCCGGGATTGCTCCATTTGGTGATCTTTTAGTTGTGCTTGCATATTCCAGAGGAGGAAGACAGAGAAAACAGTTTTAGCAATTCTGTTCCTTCACGTCAGGGAACTGCCCAGCGTCCAGAAATACATCTTGTATCATGGAAAAATGATGAACTTACCACAGATGCTCTTCCTATTCATGGTTATGAGCATTATAAGGCAAAGGATTATGCTCTTGCTCATGCTCCTTTCTCAGGAAGCAGCAATGCAGGTGGACAGTGGGCTGCTGGTGATGAACCTTTGTATTACATTGTATCTCCTAAAGATATAGTGGTCGCAAAGCCAAGAGATGCTGAAGACCATATTTCTTGGCTTCTTCAACATGGTTGGCATGAAAAGGCATTGGCTGCAGTTGAAGCAGGACAAGGACGAACCGAGCTTCTTGATGAGGTGGGTTCGAGATACCTTGATCATTTGATAATTGAAAGAAAATATGCTGAAGCTGCACGCCTCTGTCCAAAATTGTTGCGAGGATCTCCTTCAGCATGGGAGAGGTGGGTCTTTCACTTTGCCCATCTTCGCCAACTTGCTGTATTAGTTCCTTACATACCTACAGAGAATCCTCAGCTGAGTGATACAGCTTACGAGGTTGCTCTTGTAGCTTTAACTACCAATCCTTCTTTTCATGAACTTCTCTTGACAACTGTAAAAAAATGGCCACCTACATTATACTCCGCTTCACCTGTCATATCTGCAATTGAGCCACAGCTAAATTCCTCTTCAATGACTGATTCATTAAAAGAGGCTTTAGCTGAATTGTATGTCATCAACAGTCAATATGACAAGGCCCTTTCTCTGTATGCTGAACTCTTGAAGCCAGAAGTATTCGAATTTATTGAGAAGCACAACTTGCATGATGCCATTCATGACAAGGTTGTCAATCTTATGATATTGGATAGTAAAAGAACTGTAAACCTATTGATCCAGCATCGTGATACGATCCCCCCGAATGAAGTTGTAGGACAGTTGTTGCATGCTAGTAAAAGTTGTGACAAAAGACATTTGTTGCATCTGTATTTACATGCTCTGTTTGAGACAGACATGAATGCTGGAAAAGACTATCATGACATGCAGGTGGAGCTTTATGCAGAGTATGAGCCAAGGATGCTAATACCCTTCCTCCGTACCAGTCAGCATTACAGGCTTGACAAGGCATATGAAATCTTTGCACAAAAAGAGCTTGTACGGGAGCAAGTTTTTGTGCTTGGTCGTATGGGAAATGCAAAGGAAGCTCTCTCTACAATTATAAACAAATTGGAAGATATTCAGGAGGCCGTTGAATTTGTGATGGAGCAACACGATGATGAGTTATGGGAGGAATTGATAAGACAGTGCCTCCAAAAACCTGAGATGGTTGGAATGCTGTTGGAACATACTGTTGGCAATCTTGATCCTTTGTACATTGTTAGTTTGGTTCCTGATGGGCTAGAAATACCAAGGTTGCGGGATCGCCTTGTGAAAATTGTGACAGACTATCGAA-CAGAAACTTCATTAAGACATGGGTGCAATGATATACTTAAGGCTGATTGCGTAAACCTTTTGGTAAAATATTATCACGAGGCTCGGCGTGGAGTCTACATGGCTAGTATGGACGAGGAGGTGACAGGAACTAGGGTTGCTGAAGGATCTTCACGAGCAAACGAGAGATCATCAAGTTTACGAGCTTTAGAGATCAAATCCAGAACAAGGTGTGGTGCTCGGTGTTGCTTGTGCTTTGATCCTTTGTCGATTCAGGACATCTCTGTCATCGTGTTCTACTGCTGCCACGCATATCACACGTCTTGCCTCGAAGGCGGGTTGGACTTGATGAAATCGAACAGTAGTACTCAGGACAGCGACGAGGATGATGAAGGTACCCCATCAGGCGAGTCTCGAATGCGCTGTGTATTGTGTACTACAGCTGCTGCATAATAACTTATTTCGTAACGAGTAGTCCATATCCATGTGTTGTGTTGTAAGTTTGAGCCTTGTAATTAGCGTGTTATTCTGGCGTGATAAATATGTACAATAGGTTAATTCTTTGGGGGGAAGCCATATCCTCAGCAAGAGGAGTTTTGTGTAGATTTGACAGATATGTTGATTACTTGAGCAAAGTTGTACGGCATTTTTCTTAATGCCACGAGTGCCAGACCATCGGAAGTTCATTCCGATTCTTATCAAAAAAAAAAAAAA]

[+] EMBL AK073992             [CTTCCGTCTCGCCCAAATCGGCGCACCACCACCGCCCCGCCGTCCACGAATCGAACTGACCGGAGAGATCTCGCGATCCCCTCCCCACCCCTTCCTGCGCCGGTGGCGACCATGTCCACGGCGGCGCGGCGCGGCCACCCGCCGCCGCACGAGAACGGCGTGGGCGGGCACGCCGACGACGAGCCAGACGAGGACGGCGAGGAGGAGGAGGAGGAGGGGGAGGGGGAGGTGGAGGATGATGAGGAGGAGGAGCCGCGGCTCAAGTACCAGCGGCTGGGCGGGAGCGTCCCCGCGATCGTCTCCACCGACGCCGCCGCGGCCATCGCCGTCGCCGACCGCATGGTCGCGCTCGGCACGCACAACGGCACCCTCCACATCCTCGACTTCCAGGGTAATCAGGTAAAGGAAATTGCTGCTCACACAGCAACTATCAACGACATCAGTTTTGATGCAGACGGTGAATATATAGGAAGCTGCTCTGATGATGGGACTGTAGTAATAAGCAGCCTCTTCACTGATGAAAAACTGAAGTTTGAGTACCATCAACCCATGAAAGCAATTGCCTTAGACCCTAATTATTACAACAACTATAGAAGGTTCGCTACAGGGGGTTTAGCAGGTCAAGTACTTGTGCTGACAAAAAAGTCGTGGGGAGGTGGCTACCATAAAAAGGTTCTGCGTGATGGCGAAGGACCAATCCATTCTATGAAATGGAGGACAGACCTCCTTGCCTGGGCTAACGATGCAGGGGTAAAAGTGCATGATATGAAGACAGACAAAGGAATCGCGTTTATAGAGAGGCCAAAAGGAATTCCTCGGCCAGAGTTTTTACTTCCTCAGTTGGTCTGGCAGGATGATACCATCTTAGTTATTGGATGGGGAACAAGTGTCAAGATTGCAGCAATTCGAACAGATTCATCTCAAGGACTCAATGGCATACAGAGGAGTATCACTGCAAGTAATGAGAAGTACGTGGATATTGTGGGTTCGTTCCAAACAGGCTATCACATATCCGGGATTGCTCCATTTGGTGATCTTTTAGTTGTGCTTGCATATTCCAGAGGAGGAAGACAGAGAAAACAGTTTTAGCAATTCTGTTCCTTCACGTCAGGGAACTGCCCAGCGTCCAGAAATACATCTTGTATCATGGAAAAATGATGAACTTACCACAGATGCTCTTCCTATTCATGGTTATGAGCATTATAAGGCAAAGGATTATGCTCTTGCTCATGCTCCTTTCTCAGGAAGCAGCAATGCAGGTGGACAGTGGGCTGCTGGTGATGAACCTTTGTATTACATTGTATCTCCTAAAGATATAGTGGTCGCAAAGCCAAGAGATGCTGAAGACCATATTTCTTGGCTTCTTCAACATGGTTGGCATGAAAAGGCATTGGCTGCAGTTGAAGCAGGACAAGGACGAACCGAGCTTCTTGATGAGGTGGGTTCGAGATACCTTGATCATTTGATAATTGAAAGAAAATATGCTGAAGCTGCACGCCTCTGTCCAAAATTGTTGCGAGGATCTCCTTCAGCATGGGAGAGGTGGGTCTTTCACTTTGCCCATCTTCGCCAACTTGCTGTATTAGTTCCTTACATACCTACAGAGAATCCTCAGCTGAGTGATACAGCTTACGAGGTTGCTCTTGTAGCTTTAACTACCAATCCTTCTTTTCATGAACTTCTCTTGACAACTGTAAAAAAATGGCCACCTACATTATACTCCGCTTCACCTGTCATATCTGCAATTGAGCCACAGCTAAATTCCTCTTCAATGACTGATTCATTAAAAGAGGCTTTAGCTGAATTGTATGTCATCAACAGTCAATATGACAAGGCCCTTTCTCTGTATGCTGAACTCTTGAAGCCAGAAGTATTCGAATTTATTGAGAAGCACAACTTGCATGATGCCATTCATGACAAGGTTGTCAATCTTATGATATTGGATAGTAAAAGAACTGTAAACCTATTGATCCAGCATCGTGATACGATCCCCCCGAATGAAGTTGTAGGACAGTTGTTGCATGCTAGTAAAAGTTGTGACAAAAGACATTTGTTGCATCTGTATTTACATGCTCTGTTTGAGACAGACATGAATGCTGGAAAAGACTATCATGACATGCAGGTGGAGCTTTATGCAGAGTATGAGCCAAGGATGCTAATACCCTTCCTCCGTACCAGTCAGCATTACAGGCTTGACAAGGCATATGAAATCTTTGCACAAAAAGAGCTTGTACGGGAGCAAGTTTTTGTGCTTGGTCGTATGGGAAATGCAAAGGAAGCTCTCTCTACAATTATAAACAAATTGGAAGATATTCAGGAGGCCGTTGAATTTGTGATGGAGCAACACGATGATGAGTTATGGGAGGAATTGATAAGACAGTGCCTCCAAAAACCTGAGATGGTTGGAATGCTGTTGGAACATACTGTTGGCAATCTTGATCCTTTGTACATTGTTAGTTTGGTTCCTGATGGGCTAGAAATACCAAGGTTGCGGGATCGCCTTGTGAAAATTGTGACAGACTATCGAA CAGAAACTTCATTAAGACATGGGTGCAATGATATACTTAAGGCTGATTGCGTAAACCTTTTGGTAAAATATTATCACGAGGCTCGGCGTGGAGTCTACATGGCTAGTATGGACGAGGAGGTGACAGGAACTAGGGTTGCTGAAGGATCTTCACGAGCAAACGAGAGATCATCAAGTTTACGAGCTTTAGAGATCAAATCCAGAACAAGGTGTGGTGCTCGGTGTTGCTTGTGCTTTGATCCTTTGTCGATTCAGGACATCTCTGTCATCGTGTTCTACTGCTGCCACGCATATCACACGTCTTGCCTCGAAGGCGGGTTGGACTTGATGAAATCGAACAGTAGTACTCAGGACAGCGACGAGGATGATGAAGGTACCCCATCAGGCGAGTCTCGAATGCGCTGTGTATTGTGTACTACAGCTGCTGCATAATAACTTATTTCGTAACGAGTAGTCCATATCCATGTGTTGTGTTGTAAGTTTGAGCCTTGTAATTAGCGTGTTATTCTGGCGTGATAAATATGTACAATAGGTTAATTCTTTGGGGGGAAGCCATATCCTCAGCAAGAGGAGTTTTGTGTAGATTTGACAGATATGTTGATTACTTGAGCAAAGTTGTACGGCATTTTTCTTAATGCCACGAGTGCCAGACCATCGGAAGTTCATTCCG                       ]
[+] EMBL AU092346             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGAACCAGAAACTTCATTAAGACATGGNTGCAATGATATACTTAAGGCTGATTGCGT AACCTTTTGGTAAAATATTATCACGAGGCTCGGCGTGGAGTCTACATGGCTAGTATGGACGAGGAGGTGACAGGAACTAGGGTTGCTGAAGGATCTTCACGAGCAAACGAGAGATCATCAAGTTTACGAGCTTTAGAGATCAAATCCAGAACAAGGTGTGGTGCTCGGTGTTGCTTGTGCTTTGATCCTTTGTCGATTCAGGACATCTCTGTCATCGTGTTCTACTGCTGCCACGCATATCACACGTCTTGCCTCGAAGGCGGGTTGGACTTGATGAAATCGAACAGTAGTACTCAGGACAGCGACGAGGATGATGAAGGTACCCCATCAGGCGAGTCTCGAATGCGCTGTGTATTGTGTACTACAGCTGCTGCATAATAACTTATTTCGTAACGAGTAGTCCATATCCATGTGTTGTGTTGTAAGTTTGAGCCTTGTAATTAGCGTGTTATTCTGGCGTGATAAATATGTACAATAGGTTAATTCTTTGGGGGGAAGCCATATCCTCAGCAAGAGGAGTTTTGTGTAGATTTGACAGATATGTTGATTACTTGAGCAAAGTTGTACGGCATTTTTCTTAATGCCACGAGTGCCAGACCATCGGAAGTTCATTCCGATTCTTATCAAAAAAAAAAAAAA]




>consensus_6975#0
CTTCCGTCTCGCCCAAATCGGCGCACCACCACCGCCCCGCCGTCCACGAATCGAACTGAC
CGGAGAGATCTCGCGATCCCCTCCCCACCCCTTCCTGCGCCGGTGGCGACCATGTCCACG
GCGGCGCGGCGCGGCCACCCGCCGCCGCACGAGAACGGCGTGGGCGGGCACGCCGACGAC
GAGCCAGACGAGGACGGCGAGGAGGAGGAGGAGGAGGGGGAGGGGGAGGTGGAGGATGAT
GAGGAGGAGGAGCCGCGGCTCAAGTACCAGCGGCTGGGCGGGAGCGTCCCCGCGATCGTC
TCCACCGACGCCGCCGCGGCCATCGCCGTCGCCGACCGCATGGTCGCGCTCGGCACGCAC
AACGGCACCCTCCACATCCTCGACTTCCAGGGTAATCAGGTAAAGGAAATTGCTGCTCAC
ACAGCAACTATCAACGACATCAGTTTTGATGCAGACGGTGAATATATAGGAAGCTGCTCT
GATGATGGGACTGTAGTAATAAGCAGCCTCTTCACTGATGAAAAACTGAAGTTTGAGTAC
CATCAACCCATGAAAGCAATTGCCTTAGACCCTAATTATTACAACAACTATAGAAGGTTC
GCTACAGGGGGTTTAGCAGGTCAAGTACTTGTGCTGACAAAAAAGTCGTGGGGAGGTGGC
TACCATAAAAAGGTTCTGCGTGATGGCGAAGGACCAATCCATTCTATGAAATGGAGGACA
GACCTCCTTGCCTGGGCTAACGATGCAGGGGTAAAAGTGCATGATATGAAGACAGACAAA
GGAATCGCGTTTATAGAGAGGCCAAAAGGAATTCCTCGGCCAGAGTTTTTACTTCCTCAG
TTGGTCTGGCAGGATGATACCATCTTAGTTATTGGATGGGGAACAAGTGTCAAGATTGCA
GCAATTCGAACAGATTCATCTCAAGGACTCAATGGCATACAGAGGAGTATCACTGCAAGT
AATGAGAAGTACGTGGATATTGTGGGTTCGTTCCAAACAGGCTATCACATATCCGGGATT
GCTCCATTTGGTGATCTTTTAGTTGTGCTTGCATATTCCAGAGGAGGAAGACAGAGAAAA
CAGTTTTAGCAATTCTGTTCCTTCACGTCAGGGAACTGCCCAGCGTCCAGAAATACATCT
TGTATCATGGAAAAATGATGAACTTACCACAGATGCTCTTCCTATTCATGGTTATGAGCA
TTATAAGGCAAAGGATTATGCTCTTGCTCATGCTCCTTTCTCAGGAAGCAGCAATGCAGG
TGGACAGTGGGCTGCTGGTGATGAACCTTTGTATTACATTGTATCTCCTAAAGATATAGT
GGTCGCAAAGCCAAGAGATGCTGAAGACCATATTTCTTGGCTTCTTCAACATGGTTGGCA
TGAAAAGGCATTGGCTGCAGTTGAAGCAGGACAAGGACGAACCGAGCTTCTTGATGAGGT
GGGTTCGAGATACCTTGATCATTTGATAATTGAAAGAAAATATGCTGAAGCTGCACGCCT
CTGTCCAAAATTGTTGCGAGGATCTCCTTCAGCATGGGAGAGGTGGGTCTTTCACTTTGC
CCATCTTCGCCAACTTGCTGTATTAGTTCCTTACATACCTACAGAGAATCCTCAGCTGAG
TGATACAGCTTACGAGGTTGCTCTTGTAGCTTTAACTACCAATCCTTCTTTTCATGAACT
TCTCTTGACAACTGTAAAAAAATGGCCACCTACATTATACTCCGCTTCACCTGTCATATC
TGCAATTGAGCCACAGCTAAATTCCTCTTCAATGACTGATTCATTAAAAGAGGCTTTAGC
TGAATTGTATGTCATCAACAGTCAATATGACAAGGCCCTTTCTCTGTATGCTGAACTCTT
GAAGCCAGAAGTATTCGAATTTATTGAGAAGCACAACTTGCATGATGCCATTCATGACAA
GGTTGTCAATCTTATGATATTGGATAGTAAAAGAACTGTAAACCTATTGATCCAGCATCG
TGATACGATCCCCCCGAATGAAGTTGTAGGACAGTTGTTGCATGCTAGTAAAAGTTGTGA
CAAAAGACATTTGTTGCATCTGTATTTACATGCTCTGTTTGAGACAGACATGAATGCTGG
AAAAGACTATCATGACATGCAGGTGGAGCTTTATGCAGAGTATGAGCCAAGGATGCTAAT
ACCCTTCCTCCGTACCAGTCAGCATTACAGGCTTGACAAGGCATATGAAATCTTTGCACA
AAAAGAGCTTGTACGGGAGCAAGTTTTTGTGCTTGGTCGTATGGGAAATGCAAAGGAAGC
TCTCTCTACAATTATAAACAAATTGGAAGATATTCAGGAGGCCGTTGAATTTGTGATGGA
GCAACACGATGATGAGTTATGGGAGGAATTGATAAGACAGTGCCTCCAAAAACCTGAGAT
GGTTGGAATGCTGTTGGAACATACTGTTGGCAATCTTGATCCTTTGTACATTGTTAGTTT
GGTTCCTGATGGGCTAGAAATACCAAGGTTGCGGGATCGCCTTGTGAAAATTGTGACAGA
CTATCGAACAGAAACTTCATTAAGACATGGGTGCAATGATATACTTAAGGCTGATTGCGT
AAACCTTTTGGTAAAATATTATCACGAGGCTCGGCGTGGAGTCTACATGGCTAGTATGGA
CGAGGAGGTGACAGGAACTAGGGTTGCTGAAGGATCTTCACGAGCAAACGAGAGATCATC
AAGTTTACGAGCTTTAGAGATCAAATCCAGAACAAGGTGTGGTGCTCGGTGTTGCTTGTG
CTTTGATCCTTTGTCGATTCAGGACATCTCTGTCATCGTGTTCTACTGCTGCCACGCATA
TCACACGTCTTGCCTCGAAGGCGGGTTGGACTTGATGAAATCGAACAGTAGTACTCAGGA
CAGCGACGAGGATGATGAAGGTACCCCATCAGGCGAGTCTCGAATGCGCTGTGTATTGTG
TACTACAGCTGCTGCATAATAACTTATTTCGTAACGAGTAGTCCATATCCATGTGTTGTG
TTGTAAGTTTGAGCCTTGTAATTAGCGTGTTATTCTGGCGTGATAAATATGTACAATAGG
TTAATTCTTTGGGGGGAAGCCATATCCTCAGCAAGAGGAGTTTTGTGTAGATTTGACAGA
TATGTTGATTACTTGAGCAAAGTTGTACGGCATTTTTCTTAATGCCACGAGTGCCAGACC
ATCGGAAGTTCATTCCGATTCTTATCAAAAAAAAAAAAAA

consensusID : consensus_6975#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 540
fasta sequence 
                              [CCCCCCGAATGAAGTTGTAGGACAGTTGTTGCATGCTAGTAAAAGTTGTGACAAAAGACATTTGTTGCATCTGTATTTACATGCTCTGTTTGAGACAGACATGAATGCTGGAAAAGACTATCATGACATGCAGGT-GGAGCTTTATGCAGAGTATGAGCCAAGGATGCTAATACCCTTCCTCCGTACCAGTCAGCATTACAGGCTTGACAAGGCATATGAAATCTTTGCACAAAAAGAGCTTGTACGGGAGC-AAGTTTTTGTGCTTGGTCGTAT-GGGAAATGCAAAGGAAGCTCTCTCTACAATTATAAACAAATTGGAAGATATTCAGGAGGCCGTT-GAATTTGTGATGGAGCAACACGATGATGAGTTATGGGAGGAATTGATAAGACAGTGCCTCCAAAAACCTGAGATGGTTGGAATGCTGTTGGAACATACTGTTGGCAATCTTGATCCTTTGTACATTGTTAGTTTGGTTCCTGATGGGCTNNNNNNACNNNNNNNGCGNGNTCNNCTTGTGAAATTGTGANNNNCTATNNNNNN]

[+] EMBL CF196163             [CCCCCCGAATGAAGTTGTAGGACAGTTGTTGCATGCTAGTAAAAGTTGTGACAAAAGACATTTGTTGCATCTGTATTTACATGCTCTGTTTGAGACAGACATGAATGCTGGAAAAGACTATCATGACATGCAGGT GGAGCTTTATGCAGAGTATGAGCCAAGGATGCTAATACCCTTCCTCCGTACCAGTCAGCATTACAGGCTTGACAAGGCATATGAAATCTTTGCACAAAAAGAGCTTGTACGGGAGC AAGTTTTTGTGCTTGGTCGTAT GGGAAATGCAAAGGAAGCTCTCTCTACAATTATAAACAAATTGGAAGATATTCAGGAGGCCGTT GAATTTGTGATGGAGCAACACGATGATGAGTTATGGGAGGAATTGATAAGACAGTGCCTCCAAAAACCTGAGATGGTTGGAATGCTGTTGGAACATACTGTTGGCAATCTTGATCCTTTGTACATTGTTAGTTTGGTTCCTGATGGGCTNNNNNNACNNNNNNNGCGNGNTCNNCTTGTGAAATTGTGANNNNCTATNNNNNN]
[+] EMBL C26555               [                                                          CATTTGTTGCATCTGTATTTACATGCTCTGTTTGAGACAGACATGAATGCTGGAAAAGACTATCATGACATGCAGGTGGGGGCTTNATNCAGAGTNTNANCCAAGGNTGCTAATACCCTTCCTCCGTACCAGTCAGCATTACAGGCTTGACAAGGCATATGAAATCTTTGCACAAAAAGAGCTTGTACGGGAGCAAAGTTTTTGTGCTTGGTCGTATGGGGAAATGCAAAGGAAGCTCTCTCTACAATTATAAACAAATTGGAGGATATTCAGGAGGCCGTTGGAATTTGTGATGGNGCACCACGGTGAT                                                                                                                                                                                ]




>consensus_6975#1
CCCCCCGAATGAAGTTGTAGGACAGTTGTTGCATGCTAGTAAAAGTTGTGACAAAAGACA
TTTGTTGCATCTGTATTTACATGCTCTGTTTGAGACAGACATGAATGCTGGAAAAGACTA
TCATGACATGCAGGTGGAGCTTTATGCAGAGTATGAGCCAAGGATGCTAATACCCTTCCT
CCGTACCAGTCAGCATTACAGGCTTGACAAGGCATATGAAATCTTTGCACAAAAAGAGCT
TGTACGGGAGCAAGTTTTTGTGCTTGGTCGTATGGGAAATGCAAAGGAAGCTCTCTCTAC
AATTATAAACAAATTGGAAGATATTCAGGAGGCCGTTGAATTTGTGATGGAGCAACACGA
TGATGAGTTATGGGAGGAATTGATAAGACAGTGCCTCCAAAAACCTGAGATGGTTGGAAT
GCTGTTGGAACATACTGTTGGCAATCTTGATCCTTTGTACATTGTTAGTTTGGTTCCTGA
TGGGCTNNNNNNACNNNNNNNGCGNGNTCNNCTTGTGAAATTGTGANNNNCTATNNNNNN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6975#0      CTTCCGTCTCGCCCAAATCGGCGCACCACCACCGCCCCGCCGTCCACGAATCGAACTGAC 60
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      CGGAGAGATCTCGCGATCCCCTCCCCACCCCTTCCTGCGCCGGTGGCGACCATGTCCACG 120
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GCGGCGCGGCGCGGCCACCCGCCGCCGCACGAGAACGGCGTGGGCGGGCACGCCGACGAC 180
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GAGCCAGACGAGGACGGCGAGGAGGAGGAGGAGGAGGGGGAGGGGGAGGTGGAGGATGAT 240
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GAGGAGGAGGAGCCGCGGCTCAAGTACCAGCGGCTGGGCGGGAGCGTCCCCGCGATCGTC 300
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TCCACCGACGCCGCCGCGGCCATCGCCGTCGCCGACCGCATGGTCGCGCTCGGCACGCAC 360
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      AACGGCACCCTCCACATCCTCGACTTCCAGGGTAATCAGGTAAAGGAAATTGCTGCTCAC 420
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      ACAGCAACTATCAACGACATCAGTTTTGATGCAGACGGTGAATATATAGGAAGCTGCTCT 480
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GATGATGGGACTGTAGTAATAAGCAGCCTCTTCACTGATGAAAAACTGAAGTTTGAGTAC 540
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      CATCAACCCATGAAAGCAATTGCCTTAGACCCTAATTATTACAACAACTATAGAAGGTTC 600
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GCTACAGGGGGTTTAGCAGGTCAAGTACTTGTGCTGACAAAAAAGTCGTGGGGAGGTGGC 660
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TACCATAAAAAGGTTCTGCGTGATGGCGAAGGACCAATCCATTCTATGAAATGGAGGACA 720
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GACCTCCTTGCCTGGGCTAACGATGCAGGGGTAAAAGTGCATGATATGAAGACAGACAAA 780
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GGAATCGCGTTTATAGAGAGGCCAAAAGGAATTCCTCGGCCAGAGTTTTTACTTCCTCAG 840
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TTGGTCTGGCAGGATGATACCATCTTAGTTATTGGATGGGGAACAAGTGTCAAGATTGCA 900
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GCAATTCGAACAGATTCATCTCAAGGACTCAATGGCATACAGAGGAGTATCACTGCAAGT 960
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      AATGAGAAGTACGTGGATATTGTGGGTTCGTTCCAAACAGGCTATCACATATCCGGGATT 1020
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GCTCCATTTGGTGATCTTTTAGTTGTGCTTGCATATTCCAGAGGAGGAAGACAGAGAAAA 1080
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      CAGTTTTAGCAATTCTGTTCCTTCACGTCAGGGAACTGCCCAGCGTCCAGAAATACATCT 1140
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TGTATCATGGAAAAATGATGAACTTACCACAGATGCTCTTCCTATTCATGGTTATGAGCA 1200
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TTATAAGGCAAAGGATTATGCTCTTGCTCATGCTCCTTTCTCAGGAAGCAGCAATGCAGG 1260
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TGGACAGTGGGCTGCTGGTGATGAACCTTTGTATTACATTGTATCTCCTAAAGATATAGT 1320
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GGTCGCAAAGCCAAGAGATGCTGAAGACCATATTTCTTGGCTTCTTCAACATGGTTGGCA 1380
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TGAAAAGGCATTGGCTGCAGTTGAAGCAGGACAAGGACGAACCGAGCTTCTTGATGAGGT 1440
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GGGTTCGAGATACCTTGATCATTTGATAATTGAAAGAAAATATGCTGAAGCTGCACGCCT 1500
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      CTGTCCAAAATTGTTGCGAGGATCTCCTTCAGCATGGGAGAGGTGGGTCTTTCACTTTGC 1560
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      CCATCTTCGCCAACTTGCTGTATTAGTTCCTTACATACCTACAGAGAATCCTCAGCTGAG 1620
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TGATACAGCTTACGAGGTTGCTCTTGTAGCTTTAACTACCAATCCTTCTTTTCATGAACT 1680
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TCTCTTGACAACTGTAAAAAAATGGCCACCTACATTATACTCCGCTTCACCTGTCATATC 1740
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TGCAATTGAGCCACAGCTAAATTCCTCTTCAATGACTGATTCATTAAAAGAGGCTTTAGC 1800
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TGAATTGTATGTCATCAACAGTCAATATGACAAGGCCCTTTCTCTGTATGCTGAACTCTT 1860
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GAAGCCAGAAGTATTCGAATTTATTGAGAAGCACAACTTGCATGATGCCATTCATGACAA 1920
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      GGTTGTCAATCTTATGATATTGGATAGTAAAAGAACTGTAAACCTATTGATCCAGCATCG 1980
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TGATACGATCCCCCCGAATGAAGTTGTAGGACAGTTGTTGCATGCTAGTAAAAGTTGTGA 2040
consensus_6975#1      ---------CCCCCCGAATGAAGTTGTAGGACAGTTGTTGCATGCTAGTAAAAGTTGTGA 51
                               ***************************************************

consensus_6975#0      CAAAAGACATTTGTTGCATCTGTATTTACATGCTCTGTTTGAGACAGACATGAATGCTGG 2100
consensus_6975#1      CAAAAGACATTTGTTGCATCTGTATTTACATGCTCTGTTTGAGACAGACATGAATGCTGG 111
                      ************************************************************

consensus_6975#0      AAAAGACTATCATGACATGCAGGTGGAGCTTTATGCAGAGTATGAGCCAAGGATGCTAAT 2160
consensus_6975#1      AAAAGACTATCATGACATGCAGGTGGAGCTTTATGCAGAGTATGAGCCAAGGATGCTAAT 171
                      ************************************************************

consensus_6975#0      ACCCTTCCTCCGTACCAGTCAGCATTACAGGCTTGACAAGGCATATGAAATCTTTGCACA 2220
consensus_6975#1      ACCCTTCCTCCGTACCAGTCAGCATTACAGGCTTGACAAGGCATATGAAATCTTTGCACA 231
                      ************************************************************

consensus_6975#0      AAAAGAGCTTGTACGGGAGCAAGTTTTTGTGCTTGGTCGTATGGGAAATGCAAAGGAAGC 2280
consensus_6975#1      AAAAGAGCTTGTACGGGAGCAAGTTTTTGTGCTTGGTCGTATGGGAAATGCAAAGGAAGC 291
                      ************************************************************

consensus_6975#0      TCTCTCTACAATTATAAACAAATTGGAAGATATTCAGGAGGCCGTTGAATTTGTGATGGA 2340
consensus_6975#1      TCTCTCTACAATTATAAACAAATTGGAAGATATTCAGGAGGCCGTTGAATTTGTGATGGA 351
                      ************************************************************

consensus_6975#0      GCAACACGATGATGAGTTATGGGAGGAATTGATAAGACAGTGCCTCCAAAAACCTGAGAT 2400
consensus_6975#1      GCAACACGATGATGAGTTATGGGAGGAATTGATAAGACAGTGCCTCCAAAAACCTGAGAT 411
                      ************************************************************

consensus_6975#0      GGTTGGAATGCTGTTGGAACATACTGTTGGCAATCTTGATCCTTTGTACATTGTTAGTTT 2460
consensus_6975#1      GGTTGGAATGCTGTTGGAACATACTGTTGGCAATCTTGATCCTTTGTACATTGTTAGTTT 471
                      ************************************************************

consensus_6975#0      GGTTCCTGATGGGCTAGAAATACCAAGGTTGCGGGATCGCCTTGTGAAAATTGTGACAGA 2520
consensus_6975#1      GGTTCCTGATGGGCTNNNNNNACNNNNNNNGCGNGNTCNNCTTGTGAAA-TTGTGANNNN 530
                      ***************      **       *** * **  ********* ******    

consensus_6975#0      CTATCGAACAGAAACTTCATTAAGACATGGGTGCAATGATATACTTAAGGCTGATTGCGT 2580
consensus_6975#1      CTATNNNNNN-------------------------------------------------- 540
                      ****                                                        

consensus_6975#0      AAACCTTTTGGTAAAATATTATCACGAGGCTCGGCGTGGAGTCTACATGGCTAGTATGGA 2640
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      CGAGGAGGTGACAGGAACTAGGGTTGCTGAAGGATCTTCACGAGCAAACGAGAGATCATC 2700
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      AAGTTTACGAGCTTTAGAGATCAAATCCAGAACAAGGTGTGGTGCTCGGTGTTGCTTGTG 2760
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      CTTTGATCCTTTGTCGATTCAGGACATCTCTGTCATCGTGTTCTACTGCTGCCACGCATA 2820
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TCACACGTCTTGCCTCGAAGGCGGGTTGGACTTGATGAAATCGAACAGTAGTACTCAGGA 2880
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      CAGCGACGAGGATGATGAAGGTACCCCATCAGGCGAGTCTCGAATGCGCTGTGTATTGTG 2940
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TACTACAGCTGCTGCATAATAACTTATTTCGTAACGAGTAGTCCATATCCATGTGTTGTG 3000
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TTGTAAGTTTGAGCCTTGTAATTAGCGTGTTATTCTGGCGTGATAAATATGTACAATAGG 3060
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TTAATTCTTTGGGGGGAAGCCATATCCTCAGCAAGAGGAGTTTTGTGTAGATTTGACAGA 3120
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      TATGTTGATTACTTGAGCAAAGTTGTACGGCATTTTTCTTAATGCCACGAGTGCCAGACC 3180
consensus_6975#1      ------------------------------------------------------------
                                                                                  

consensus_6975#0      ATCGGAAGTTCATTCCGATTCTTATCAAAAAAAAAAAAAA 3220
consensus_6975#1      ----------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)