|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6978#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2712 fasta sequence
[CCGTCTTGCAACTAGCTCCGGTCCAAAACCGCACTTGTGTGCACGACGGCTACTCACTCTCGCAGTGGCGTGTTAGCATAGCACCGCTCGCTCGTTGCTCGCGCGCGCCGGGAATCCTAGCAATGGCCTCCTCCTCCCCGCTCTGCTGCTACCTGCTGCTCTTCGTCGTCGTCGTGGTGCTCACGGGCAGCTGCCGTGCCAGGGACACAGTCGTGCCCGGCCGCCCGCTCGCCGCGAACGAGACGCTGGTCTCGGGCGGCGACGCCAACTTCGTGCTCGGCTTCTTCACCCGGCCGGGCGCCAACAGCACCTACGTCGGCGTCTGGTACAACAAGGTCTCGGTCCGCACCGTCGTCTGGGTCGCCAACCGCGAGGACCCGCTCCCCGGCGACGTCGCGGACAACCCCGACGCCACGCTCTCCGTGTCGCCCACGGGCACGCTCGCCATTGTAGCGGGGAACTCGACCGTTGTGTGGTCGGTCACGCCGGCGGCCAAGCTGGCGAGCCCCACGGCCCGGATCATGGACAGCGGAAACCTGGTGATCGCGGACGGCGCTGGCGGTGGCGTGGCGTGGCAGGGGTTCGACTACCCGACCGACACGCTGCTCCCGGAGATGAGGCTGGGCGTCGACTACGTGAAGGGGAGGAACAGGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCCTCGCCGGGCCCCGTCGTGATGGCCATGGACACGTCCGGCGACCCCCAGGTGTTCATCTGGAACGGCGCCGAGAAGGTCTGGCGCTCCGGCCCCTGGGACGGCGTCCAGTTCACCGGCGTCCCGGACACCGTCACCTACTCCGGCTTCACCTTCAGCTTCATCAACAACGCCAAGGAAGTCACGTACAGCTTCCAGGTGCACAACGTGTCGATCATATCGAGGCTGGGGCTGAACAGCACGGGGAGCTACGGGCTGCTGCAGCGGTCGACGTGGGTGGAGGCGGCGGGGACGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGAGGTGTCCCCGTGCGGGGCCAACGGCGTGTGCGACACAAACAACCTGCCCGTCTGCTCCTGCCTCCGCGGCTTCACGCCCAAGTCGCCCGAGGCGTGGGCGCTGCGTGACGGCCGCGCGGGGTGCGTGCGGTCGACGCCGCTCGACTGCCAGAACGGCACCGACGGGTTCGTCGCCGTGGAGCACGCCAAGGTGCCCGACACGGAGCGGAGCGTCGTGGACCTGGGCCTCAGCCTGGAGCAGTGCCGGAAGGCGTGCCTCATGAACTGCTCCTGCACGGCGTACGCGAGCGCCAACGTGAGCGGTGGCGGCCGCGGCCACGGCGCCGGCACCGGCTGCGTCATGTGGACGACCGGGCTCACCGACCTGCGCGTGTACCCGGAGTTCGGCCAGGACCTCTTCGTCCGCCTCGCCGCCGCAGATCTCGGTTTAACAAGCAAATCTAACAAGGCACGTGTAATAATCGCCATCGTTGTCAGCATCTCATCGGTGACGTTTCTGTCAGTTCTCGCTGGTTTTCTCGTCTGGACAAGAAAGAAGAAGAGAGCAAGAAAAACCGGATCAAGCAAATGGAGCGGTGGTTCCCGCAGTACTGGTCGCCGCTATGAAGGAAGCAGTCATCACGATGATGATCTGGAACTTCCAATCTTTGATCTGGGGACAATTGCAGCTGCTACTGATGGTTTCTCAATCAACAACAAGCTCGGTGAGGGTGGCTTCGGACCAGTATACAAGGGTAAGCTCGAGGATGGACAAGAAATAGCAGTTAAAACGTTGTCCAAAACATCCGTACAGGGTCTCGACGAATTCAAGAATGAGGTAATGTTGATAGCTAAACTTCAGCATAGGAATCTTGTTCGGCTTCTCGGCTTCAGCATTAGTGGACAAGAAAGGATACTTGTGTACGAATACATGGCAAACAAGAGCCTAGACTACTTTCTGTTCGCGCGATACCGTATAATAGAAGGCATTACTAGAGGTTTACTATATCTTCACCAGGATTCAAGATACAGAATCATCCACAGAGACCTGAAGGCAAGTAATGTTCTTCTTGACAAGGAGATGACTCCCAAAATTTCTGACTTTGGCATGGCAAGAATGTTTGGAAGTGAAGAGACAGAAATCAATACCAGAAAAGTGGTCGGCACATATGGCTATATGTCTCCAGAATATGCAATGGACGGAGTCTTTTCTGTCAAATCAGATGTATTTAGTTTTGGAGTTTTACTACTGGAAATAATTAGTGGCAGGAGGAACAGAGGGGTTTATTCATATTCAAACCACCTAAATCTTCTGGGACATGCATGGAGCTTATGGAATGAAGGAAAAAGCTTGGAGTTAGCAGATGAAACAATGAATGGCTCGTTCGACTCAGATGAAGTACTCAAATGCATCAGAGTGGGACTCCTATGTGTGCAAGAGAACCCAGATGACCGTCCATTGATGTCTCAGGTGCTTCTGATGTTAGCTACGACAGATGCTACCACATTGCCAACTCCTAAACAGCCTGGCTTTGCAGCTAGAAGAATTCTAATGGAAACAGACACATCATCAAGCAAGCCAGACTGCAGCATATTCGACAGTGCAACAGTTACTATACTTGAAGGTCGATAGGATGTTAATGTGCTAATTGAACTTACTAGGGGAATGTGCATTACATAATGTGCTTTCTTCATCACCGTGTGTTTGAGCAACA]
[+] EMBL AY327041 [CCGTCTTGCAACTAGCTCCGGTCCAAAACCGCACTTGTGTGCACGACGGCTACTCACTCTCGCAGTGGCGTGTTAGCATAGCACCGCTCGCTCGTTGCTCGCGCGCGCCGGGAATCCTAGCAATGGCCTCCTCCTCCCCGCTCTGCTGCTACCTGCTGCTCTTCGTCGTCGTCGTGGTGCTCACGGGCAGCTGCCGTGCCAGGGACACAGTCGTGCCCGGCCGCCCGCTCGCCGCGAACGAGACGCTGGTCTCGGGCGGCGACGCCAACTTCGTGCTCGGCTTCTTCACCCGGCCGGGCGCCAACAGCACCTACGTCGGCGTCTGGTACAACAAGGTCTCGGTCCGCACCGTCGTCTGGGTCGCCAACCGCGAGGACCCGCTCCCCGGCGACGTCGCGGACAACCCCGACGCCACGCTCTCCGTGTCGCCCACGGGCACGCTCGCCATTGTAGCGGGGAACTCGACCGTTGTGTGGTCGGTCACGCCGGCGGCCAAGCTGGCGAGCCCCACGGCCCGGATCATGGACAGCGGAAACCTGGTGATCGCGGACGGCGCTGGCGGTGGCGTGGCGTGGCAGGGGTTCGACTACCCGACCGACACGCTGCTCCCGGAGATGAGGCTGGGCGTCGACTACGTGAAGGGGAGGAACAGGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCCTCGCCGGGCCCCGTCGTGATGGCCATGGACACGTCCGGCGACCCCCAGGTGTTCATCTGGAACGGCGCCGAGAAGGTCTGGCGCTCCGGCCCCTGGGACGGCGTCCAGTTCACCGGCGTCCCGGACACCGTCACCTACTCCGGCTTCACCTTCAGCTTCATCAACAACGCCAAGGAAGTCACGTACAGCTTCCAGGTGCACAACGTGTCGATCATATCGAGGCTGGGGCTGAACAGCACGGGGAGCTACGGGCTGCTGCAGCGGTCGACGTGGGTGGAGGCGGCGGGGACGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGAGGTGTCCCCGTGCGGGGCCAACGGCGTGTGCGACACAAACAACCTGCCCGTCTGCTCCTGCCTCCGCGGCTTCACGCCCAAGTCGCCCGAGGCGTGGGCGCTGCGTGACGGCCGCGCGGGGTGCGTGCGGTCGACGCCGCTCGACTGCCAGAACGGCACCGACGGGTTCGTCGCCGTGGAGCACGCCAAGGTGCCCGACACGGAGCGGAGCGTCGTGGACCTGGGCCTCAGCCTGGAGCAGTGCCGGAAGGCGTGCCTCATGAACTGCTCCTGCACGGCGTACGCGAGCGCCAACGTGAGCGGTGGCGGCCGCGGCCACGGCGCCGGCACCGGCTGCGTCATGTGGACGACCGGGCTCACCGACCTGCGCGTGTACCCGGAGTTCGGCCAGGACCTCTTCGTCCGCCTCGCCGCCGCAGATCTCGGTTTAACAAGCAAATCTAACAAGGCACGTGTAATAATCGCCATCGTTGTCAGCATCTCATCGGTGACGTTTCTGTCAGTTCTCGCTGGTTTTCTCGTCTGGACAAGAAAGAAGAAGAGAGCAAGAAAAACCGGATCAAGCAAATGGAGCGGTGGTTCCCGCAGTACTGGTCGCCGCTATGAAGGAAGCAGTCATCACGATGATGATCTGGAACTTCCAATCTTTGATCTGGGGACAATTGCAGCTGCTACTGATGGTTTCTCAATCAACAACAAGCTCGGTGAGGGTGGCTTCGGACCAGTATACAAGGGTAAGCTCGAGGATGGACAAGAAATAGCAGTTAAAACGTTGTCCAAAACATCCGTACAGGGTCTCGACGAATTCAAGAATGAGGTAATGTTGATAGCTAAACTTCAGCATAGGAATCTTGTTCGGCTTCTCGGCTTCAGCATTAGTGGACAAGAAAGGATACTTGTGTACGAATACATGGCAAACAAGAGCCTAGACTACTTTCTGTTCGCGCGATACCGTATAATAGAAGGCATTACTAGAGGTTTACTATATCTTCACCAGGATTCAAGATACAGAATCATCCACAGAGACCTGAAGGCAAGTAATGTTCTTCTTGACAAGGAGATGACTCCCAAAATTTCTGACTTTGGCATGGCAAGAATGTTTGGAAGTGAAGAGACAGAAATCAATACCAGAAAAGTGGTCGGCACATATGGCTATATGTCTCCAGAATATGCAATGGACGGAGTCTTTTCTGTCAAATCAGATGTATTTAGTTTTGGAGTTTTACTACTGGAAATAATTAGTGGCAGGAGGAACAGAGGGGTTTATTCATATTCAAACCACCTAAATCTTCTGGGACATGCATGGAGCTTATGGAATGAAGGAAAAAGCTTGGAGTTAGCAGATGAAACAATGAATGGCTCGTTCGACTCAGATGAAGTACTCAAATGCATCAGAGTGGGACTCCTATGTGTGCAAGAGAACCCAGATGACCGTCCATTGATGTCTCAGGTGCTTCTGATGTTAGCTACGACAGATGCTACCACATTGCCAACTCCTAAACAGCCTGGCTTTGCAGCTAGAAGAATTCTAATGGAAACAGACACATCATCAAGCAAGCCAGACTGCAGCATATTCGACAGTGCAACAGTTACTATACTTGAAGGTCGATAGGATGTTAATGTGCTAATTGAACTTACTAGGGGAATGTGCATTACATAATGTGCTTTCTTCATCACCGTGTGTTTGAGCAACA]
consensusID : consensus_6978#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2705 fasta sequence
[ACTCGCGCGCACCGCGACGAATCGACCATATGGCCATCCATCAGCTCAGCTTCGTGCTCCTCCTCATGCTGCACGCGCCGGCGACGTCGCGTGCCCGCGACAGCATCGCGCCGGGCGAGCCGCTCGCGGGCCACGACACGCTCGTCTCTGCCGGCGCCGGCGACAGCGGCGGCTTCGCGCTCGGGTTCTTCACCCCGCCGGGATCCAACGACACCTACGTCGGGGTGTGGTACGCGCGGGTGTCCCCCCGCACCGTCGTCTGGGTCGCCAACCGCGCCGACCCCGTCCCGGGCCCCGTCGACGGCAACGCCGGCGCCACGTTGTCCGTGTCCCGCGCCTGCGAGCTCGCCGTCGCCGACGCCAACTCCACCGTCGTGTGGTCGGTCACGCCGGCGACGACAGGGCCCTGCACGGCGAGGATACGGGACGACGGCAACCTGGTCGTCACCGACGAGCGCGGCCGGGTGGCGTGGCAGGGGTTCGACCACCCCACCGACACGCTGCTCCCCGGGATGAGGATTGGGGTGGACTTCGCCGCCGGCAACAACATGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCGTCGCCGAGCTCTGTGGTCGTGGCCATGGACACCTCCGGCGATCCGGAGGTGTTCCTCTGGAACGGGCCGAACAAGGTGTGGCGCTCCGGCCCCTGGGACGGCATGCAGTTCACCGGCGTCCCGGACACCATCACCTACAAGAACTTCAGCTTCAGCTTCGTGAACAGCGCCCGGGAGGTCACCTACAGCTTCCAGGTGCCCGACGCGAGCATCATGTCGCGGCTGGTGCTGAACAGCAGCGGCGGCGGGCTGGTGCAGCGGTGGACGTGGGTGGAGGCGGCGGGGGCGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGCCGTGTCGCCGTGCGGCGCCAACGGGGTGTGCGACACCAACAGCCTCCCCGTGTGCTCCTGCCTCCGCGGGTTCGCGCCGCGGTCGCCGGCGGCGTGGGCGCTGCGGGACGGCCGCGACGGGTGCGCGCGGGAGACGCCGCTCGGTTGCGCCAACGGCACCGACGGGTTCGCCGTGGTGCGGCACGCCAAGGCGCCCGACACGACCGCCGCGACGGTGGACTACGACGCCGGCCTCCAGCTGTGCCGGCGGAGGTGCCTGGGCAACTGCTCGTGCACGGCGTACGCCAACGCCAACCTCAGCGCGCCGCCCGGGCGCCGCGGCTGCGTCATGTGGACCGGCGAGCTGGAAGACCTTCGAGTGTACCCGGCCTTCGGCCAGGACCTCTACGTCCGCCTCGCCGCCGCCGATCTCGATTCAACAAGCAAGTCTAAGAAGAAGACGCACATTATAATTGCAGTAGTTGTCAGCATCTGTGCGCTGGCAACTATTTTAGCCCTTACTGGGATGTACATTTGGAGAACAAAGAAGACAAAAGCAAGGCGACAAGGACCAAGTAACTGGAGTGGTGGTTTACACAGTAGAGAGCTCCACAGTGAAGGAAATAGCCATGGGGATGACCTGGATCTGCCTCTATTTGGTTTGGAGACAATAGCATCAGCCACAAATGGTTTCTCAGCAGACAACAAACTTGGAGAAGGTGGCTTTGGGCCAGTATACAAGGGTACACTAGAGGATGGGCAAGAAATAGCAGTTAAAACACTTTCAAAGACGTCAGTACAGGGTCTTGATGAGTTCAGGAATGAGGTTATGTTGATAGCTAAACTCCAGCATCGAAATCTTGTTCAACTTATTGGCTACAGCGTTTGTGGACAAGAAAAGATGCTTCTATACGAATTTATGGAAAACAAAAGCCTGGACTGTTTCCTGTTTGACAAATCCAAGAGCAAGCTACTTGACTGGCAAACAAGATACCACATAATCGAGGGGATTGCCCGAGGTTTGCTGTATCTTCACCAGGACTCAAGATATAGAATCATCCACAGAGACCTGAAGACAAGCAACATTCTTCTGGATAAGGAGATGACTCCTAAAATTTCAGACTTTGGTATGGCAAGAATGTTTGGCAGTGACGACACGGAAATAAATACAGTTAGAGTGGTTGGCACATACGGCTATATGGCCCCCGAGTACGCAATGGATGGAGTATTTTCAGTGAAATCAGATGTACTTAGTTTCGGCGTCATAGTGCTAGAAATCATTTCTGGTAAAAGGAACAGGGGTGTCTACAGCTACTCCAGCCACCTAAACCTTCTAGCACGTGCATGGAGCTCATGGAGTGAAGGGAACAGCCTCGATCTCGTCGACAAAACACTGAACGGCTCATTCAACCAAGAGGAAGTGCTAAAATGCCTTAAAGTGGGGCTCCTATGTGTCCAGGAGAACCCGGACGACCGTCCTCTCATGTCCCAGGTGCTCCTGATGCTGGCCAGCGCCGATGCCACCTCATTGCCAGATCCCAGGAAGCCTGGGTTCGTCGCAAGAAGAGCTGCAACGGAGGACACGTCGTCGAGCAGACCAGACTGCAGCTTCGTGGACAGCATGACCATCACCATGATCGAGGGCAGGTAGGAATATAGGATCGGAGTCGGAGCGCGACATTGTACTGAAGATTACTAGAACGCCTTTGCCTTTGCATTTTACTAGGTATTCTGTGTAGAATCATATATAGTCTTGTGATTGATTAACCCTAGCACTGAGTTGCGAATTCAATCCCACCCAAATAACCAGAAA]
[+] EMBL AK110116 [ACTCGCGCGCACCGCGACGAATCGACCATATGGCCATCCATCAGCTCAGCTTCGTGCTCCTCCTCATGCTGCACGCGCCGGCGACGTCGCGTGCCCGCGACAGCATCGCGCCGGGCGAGCCGCTCGCGGGCCACGACACGCTCGTCTCTGCCGGCGCCGGCGACAGCGGCGGCTTCGCGCTCGGGTTCTTCACCCCGCCGGGATCCAACGACACCTACGTCGGGGTGTGGTACGCGCGGGTGTCCCCCCGCACCGTCGTCTGGGTCGCCAACCGCGCCGACCCCGTCCCGGGCCCCGTCGACGGCAACGCCGGCGCCACGTTGTCCGTGTCCCGCGCCTGCGAGCTCGCCGTCGCCGACGCCAACTCCACCGTCGTGTGGTCGGTCACGCCGGCGACGACAGGGCCCTGCACGGCGAGGATACGGGACGACGGCAACCTGGTCGTCACCGACGAGCGCGGCCGGGTGGCGTGGCAGGGGTTCGACCACCCCACCGACACGCTGCTCCCCGGGATGAGGATTGGGGTGGACTTCGCCGCCGGCAACAACATGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCGTCGCCGAGCTCTGTGGTCGTGGCCATGGACACCTCCGGCGATCCGGAGGTGTTCCTCTGGAACGGGCCGAACAAGGTGTGGCGCTCCGGCCCCTGGGACGGCATGCAGTTCACCGGCGTCCCGGACACCATCACCTACAAGAACTTCAGCTTCAGCTTCGTGAACAGCGCCCGGGAGGTCACCTACAGCTTCCAGGTGCCCGACGCGAGCATCATGTCGCGGCTGGTGCTGAACAGCAGCGGCGGCGGGCTGGTGCAGCGGTGGACGTGGGTGGAGGCGGCGGGGGCGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGCCGTGTCGCCGTGCGGCGCCAACGGGGTGTGCGACACCAACAGCCTCCCCGTGTGCTCCTGCCTCCGCGGGTTCGCGCCGCGGTCGCCGGCGGCGTGGGCGCTGCGGGACGGCCGCGACGGGTGCGCGCGGGAGACGCCGCTCGGTTGCGCCAACGGCACCGACGGGTTCGCCGTGGTGCGGCACGCCAAGGCGCCCGACACGACCGCCGCGACGGTGGACTACGACGCCGGCCTCCAGCTGTGCCGGCGGAGGTGCCTGGGCAACTGCTCGTGCACGGCGTACGCCAACGCCAACCTCAGCGCGCCGCCCGGGCGCCGCGGCTGCGTCATGTGGACCGGCGAGCTGGAAGACCTTCGAGTGTACCCGGCCTTCGGCCAGGACCTCTACGTCCGCCTCGCCGCCGCCGATCTCGATTCAACAAGCAAGTCTAAGAAGAAGACGCACATTATAATTGCAGTAGTTGTCAGCATCTGTGCGCTGGCAACTATTTTAGCCCTTACTGGGATGTACATTTGGAGAACAAAGAAGACAAAAGCAAGGCGACAAGGACCAAGTAACTGGAGTGGTGGTTTACACAGTAGAGAGCTCCACAGTGAAGGAAATAGCCATGGGGATGACCTGGATCTGCCTCTATTTGGTTTGGAGACAATAGCATCAGCCACAAATGGTTTCTCAGCAGACAACAAACTTGGAGAAGGTGGCTTTGGGCCAGTATACAAGGGTACACTAGAGGATGGGCAAGAAATAGCAGTTAAAACACTTTCAAAGACGTCAGTACAGGGTCTTGATGAGTTCAGGAATGAGGTTATGTTGATAGCTAAACTCCAGCATCGAAATCTTGTTCAACTTATTGGCTACAGCGTTTGTGGACAAGAAAAGATGCTTCTATACGAATTTATGGAAAACAAAAGCCTGGACTGTTTCCTGTTTGACAAATCCAAGAGCAAGCTACTTGACTGGCAAACAAGATACCACATAATCGAGGGGATTGCCCGAGGTTTGCTGTATCTTCACCAGGACTCAAGATATAGAATCATCCACAGAGACCTGAAGACAAGCAACATTCTTCTGGATAAGGAGATGACTCCTAAAATTTCAGACTTTGGTATGGCAAGAATGTTTGGCAGTGACGACACGGAAATAAATACAGTTAGAGTGGTTGGCACATACGGCTATATGGCCCCCGAGTACGCAATGGATGGAGTATTTTCAGTGAAATCAGATGTACTTAGTTTCGGCGTCATAGTGCTAGAAATCATTTCTGGTAAAAGGAACAGGGGTGTCTACAGCTACTCCAGCCACCTAAACCTTCTAGCACGTGCATGGAGCTCATGGAGTGAAGGGAACAGCCTCGATCTCGTCGACAAAACACTGAACGGCTCATTCAACCAAGAGGAAGTGCTAAAATGCCTTAAAGTGGGGCTCCTATGTGTCCAGGAGAACCCGGACGACCGTCCTCTCATGTCCCAGGTGCTCCTGATGCTGGCCAGCGCCGATGCCACCTCATTGCCAGATCCCAGGAAGCCTGGGTTCGTCGCAAGAAGAGCTGCAACGGAGGACACGTCGTCGAGCAGACCAGACTGCAGCTTCGTGGACAGCATGACCATCACCATGATCGAGGGCAGGTAGGAATATAGGATCGGAGTCGGAGCGCGACATTGTACTGAAGATTACTAGAACGCCTTTGCCTTTGCATTTTACTAGGTATTCTGTGTAGAATCATATATAGTCTTGTGATTGATTAACCCTAGCACTGAGTTGCGAATTCAATCCCACCCAAATAACCAGAAA]
[+] EMBL CB636103 [ ATCGACCATATGGCCATCCATCAGCTCAGCTTCGTGCTCCTCCTCATGCTGCTCGCGCCGGCGACGTCGCGTGCCCGCGACAGCATCGCGCCGGGCGAGCCGCTCGCGGGCCACGACACGCTCGTCTCTGCCGGCGCCGGCGACGGCGGCGGCTTCGCGCTCGGGTTCTTCACCCCGCCGGGATCCAACGACACCTACGTCGGGGTGTGG ]
[-] EMBL CB636104 [ GTATTTTCAGTGAAATCAGATGTATTCAGTTTCGGCGTCATAGTGCTAGAAATCATTTCTGGTAAAAGGAACAGGGGTGTCTACAGTTACTCCAGCCACCTAAACCTTTTAGCACGTGCATGGAGCTCATGGAGTGAAGGGAACAGCCTCGATCTCGTCGACAAAACACTGAACGGCTCATTCAACCAAGAGGAAGTGCTAAAATGCCTCAAAGTGGGGCTCCTATGTGTCCAGGAGAACCCGGACGACCGTCCTCTCATGTCCCAGGTGCTCCTGATGCTGGCCAGCGCCGATGCCACCTCATTGCCAGATCCCAGGAAGCCTGGGTTCGTCGCAAGAAGAGCTGCAACGGAGGACACGTCGTCGAGCAGACCAGACTGCAGCTTCGTGGACAGCATGACCATCACCATGATCGAGGGCAGGTAGGAATATAGGATCGGAGTCGGAGCGCGACATTGTACTGAAGATTACTAGAACGCCTTTGCCTTTGCATTTTACTAGGTATTCTGTG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6978#0 CCGTCTTGCAACTAGCTCCGGTCCAAAACCGCACTTGTGTGCACGACGGCTACTCACTCT 60
consensus_6978#1 ------------------------------------------------------------
consensus_6978#0 CGCAGTGGCGTGTTAGCATAGCACCGCTCGCTCGTTGCTCGCGCGCGCCGGGAATCCTAG 120
consensus_6978#1 ------------------------------------ACTCGCGCGCACCGCGAC-----G 19
********* *** ** *
consensus_6978#0 CAATGGCCTCCTCCTCCCCGCTCTGCTGCTACCTGCTGCTCTTCGTCGTCGTCGTGGTGC 180
consensus_6978#1 AATCGACCATATGGCCATCCATCAGCT-CAGCTTCGTGCTCCTCCTCAT----GCTGCAC 74
* * ** * * * ** *** * * * ***** ** ** * * * *
consensus_6978#0 TCACGGGCAGCTGC-CGTGCCAGGGACACAGTCGTGCCCGGCCGCCCGCTCGCCGCGAAC 239
consensus_6978#1 GCGCCGGCGACGTCGCGTGCCCGCGACAGCATCGCGCCGGGCGAGCCGCTCGCGGGCCAC 134
* * *** * * ****** * **** *** *** *** ******** * **
consensus_6978#0 GAGACGCTGGTCTCGGGCGGCGACGCCAAC---------TTCGTGCTCGGCTTCTTCACC 290
consensus_6978#1 GACACGCTCGTCTCTGCCGGCGCCGGCGACAGCGGCGGCTTCGCGCTCGGGTTCTTCACC 194
** ***** ***** * ***** ** * ** **** ****** *********
consensus_6978#0 CGGCCGGGCGCCAACAGCACCTACGTCGGCGTCTGGTACAACAAGGTCTCGGTCCGCACC 350
consensus_6978#1 CCGCCGGGATCCAACGACACCTACGTCGGGGTGTGGTACGCGCGGGTGTCCCCCCGCACC 254
* ****** ***** ************ ** ****** *** ** *******
consensus_6978#0 GTCGTCTGGGTCGCCAACCGCGAGGACCCGCTCCCCGGCGACGTCGCGGACAACCCCGAC 410
consensus_6978#1 GTCGTCTGGGTCGCCAACCGCGCCGACCCCGTCCCGGGCCCCGTCGACGGCAACGCCGGC 314
********************** ***** **** *** ***** * **** *** *
consensus_6978#0 GCCACGCTCTCCGTGTCGCCCACGGGCACGCTCGCCATTGTAGCGGGGAACTCGACCGTT 470
consensus_6978#1 GCCACGTTGTCCGTGTCCCGCGCCTGCGAGCTCGCCGTCGCCGACGCCAACTCCACCGTC 374
****** * ******** * * * ** ******* * * * * ***** *****
consensus_6978#0 GTGTGGTCGGTCACGCCGGCGGCCAAGCTGGCGAGCCCCACGGCCCGGATCATGGACAGC 530
consensus_6978#1 GTGTGGTCGGTCACGCCGGCGAC---GACAGGGCCCTGCACGGCGAGGATACGGGACGAC 431
********************* * * * * * ****** **** **** *
consensus_6978#0 GGAAACCTGGTGATCGCGGACGGCGCTGGCGGTGGCGTGGCGTGGCAGGGGTTCGACTAC 590
consensus_6978#1 GGCAACCTGGTCGTCACCGACGA-GC--GCGGCCGGGTGGCGTGGCAGGGGTTCGACCAC 488
** ******** ** * **** ** **** * ********************* **
consensus_6978#0 CCGACCGACACGCTGCTCCCGGAGATGAGGCTGGGCGTCGACTACGTGAAGGGGAGGAAC 650
consensus_6978#1 CCCACCGACACGCTGCTCCCCGGGATGAGGATTGGGGTGGACTTCGCCGCCGGCAACAAC 548
** ***************** * ******* * ** ** **** ** ** * ***
consensus_6978#0 AGGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCCTCGCCGGGCCCCGTCGTGATGGCC 710
consensus_6978#1 ATGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCGTCGCCGAGCTCTGTGGTCGTGGCC 608
* ********************************* ****** ** * ** ** *****
consensus_6978#0 ATGGACACGTCCGGCGACCCCCAGGTGTTCATCTGGAACGGCGCCGAGAAGGTCTGGCGC 770
consensus_6978#1 ATGGACACCTCCGGCGATCCGGAGGTGTTCCTCTGGAACGGGCCGAACAAGGTGTGGCGC 668
******** ******** ** ******** ********** * * ***** ******
consensus_6978#0 TCCGGCCCCTGGGACGGCGTCCAGTTCACCGGCGTCCCGGACACCGTCACCTACTCCGGC 830
consensus_6978#1 TCCGGCCCCTGGGACGGCATGCAGTTCACCGGCGTCCCGGACACCATCACCTACAAGAAC 728
****************** * ************************ ******** *
consensus_6978#0 TTCACCTTCAGCTTCATCAACAACGCCAAGGAAGTCACGTACAGCTTCCAGGTGCACAAC 890
consensus_6978#1 TTCAGCTTCAGCTTCGTGAACAGCGCCCGGGAGGTCACCTACAGCTTCCAGGTGCCCGAC 788
**** ********** * **** **** *** ***** **************** * **
consensus_6978#0 GTGTCGATCATATCGAGGCTGGGGCTGAACAGCACGGGGAGCTACGGGCTGCTGCAGCGG 950
consensus_6978#1 GCGAGCATCATGTCGCGGCTGGTGCTGAACAGCA---GCGGCGGCGGGCTGGTGCAGCGG 845
* * ***** *** ****** *********** * ** ******* ********
consensus_6978#0 TCGACGTGGGTGGAGGCGGCGGGGACGTGGAACCTGTACTGGTACGCGCCCAAGGACCAG 1010
consensus_6978#1 TGGACGTGGGTGGAGGCGGCGGGGGCGTGGAACCTGTACTGGTACGCGCCCAAGGACCAG 905
* ********************** ***********************************
consensus_6978#0 TGCGACGAGGTGTCCCCGTGCGGGGCCAACGGCGTGTGCGACACAAACAACCTGCCCGTC 1070
consensus_6978#1 TGCGACGCCGTGTCGCCGTGCGGCGCCAACGGGGTGTGCGACACCAACAGCCTCCCCGTG 965
******* ***** ******** ******** *********** **** *** *****
consensus_6978#0 TGCTCCTGCCTCCGCGGCTTCACGCCCAAGTCGCCCGAGGCGTGGGCGCTGCGTGACGGC 1130
consensus_6978#1 TGCTCCTGCCTCCGCGGGTTCGCGCCGCGGTCGCCGGCGGCGTGGGCGCTGCGGGACGGC 1025
***************** *** **** ****** * *************** ******
consensus_6978#0 CGCGCGGGGTGCGTGCGGTCGACGCCGCTCGACTGCCAGAACGGCACCGACGGGTTCGTC 1190
consensus_6978#1 CGCGACGGGTGCGCGCGGGAGACGCCGCTCGGTTGCGCCAACGGCACCGACGGGTTCGCC 1085
**** ******* **** *********** *** ******************* *
consensus_6978#0 GCCGTGGAGCACGCCAAGGTGCCCGACACGGAGCGGAGCGTCG-TGGACCTGGGCCTCAG 1249
consensus_6978#1 GTGGTGCGGCACGCCAAGGCGCCCGACACG-ACCGCCGCGACGGTGGACTACGACGCCGG 1144
* *** *********** ********** * ** *** ** ***** * * * *
consensus_6978#0 CCTGGAGCAGTGCCGGAAGGCGTGCCTCATGAACTGCTCCTGCACGGCGTACGCGAGCGC 1309
consensus_6978#1 CCTCCAGCTGTGCCGGCGGAGGTGCCTGGGCAACTGCTCGTGCACGGCGTACGCCAACGC 1204
*** *** ******* * ****** ******** ************** * ***
consensus_6978#0 CAACGTGAGCGGTGGCGGCCGCGGCCACGGCGCCGGCACCGGCTGCGTCATGTGGACGAC 1369
consensus_6978#1 CAACCTCAGCG--------CGCCGCCCGGGCGCCG----CGGCTGCGTCATGTGGACCGG 1252
**** * **** *** *** ******* ******************
consensus_6978#0 CGGGCTCACCGACCTGCGCGTGTACCCGGAGTTCGGCCAGGACCTCTTCGTCCGCCTCGC 1429
consensus_6978#1 CGAGCTGGAAGACCTTCGAGTGTACCCGGCCTTCGGCCAGGACCTCTACGTCCGCCTCGC 1312
** *** ***** ** ********** **************** ************
consensus_6978#0 CGCCGCAGATCTCGGTTTAACAAGCAAATCTAACAAGG---CACGTGTAATAATCGCCAT 1486
consensus_6978#1 CGCCGCCGATCTCGATTCAACAAGCAAGTCTAAGAAGAAGACGCACATTATAATTGCAGT 1372
****** ******* ** ********* ***** *** * * * ***** ** *
consensus_6978#0 CGTTGTCAGCATCTCATCGGTGACGTTTCTGTCAGTTCTCGCTGGTTTTCTCGTCTGGAC 1546
consensus_6978#1 AGTTGTCAGCATCTGTGCGCTGGCAACTATTTTAGCCCTTACTGGGATGTACATTTGGAG 1432
************* ** ** * * * * ** ** **** * * * ****
consensus_6978#0 AAGAAAGAAGAAGAGAGCAAGAAAAACCGGATCAAGCAAATGGAGCGGTGGTTCCCGCAG 1606
consensus_6978#1 AACAAAGAAGACAAAAGCAAGGCGACAAGGACCAAGTAACTGGAGTGGTGGTTTACACAG 1492
** ******** * ****** * *** **** ** ***** ******* * ***
consensus_6978#0 TACTGGTCGCCGCTATGAAGGAAGCAGTCATCACGATGATGATCTGGAACTTCCAATCTT 1666
consensus_6978#1 TAGAGAGCTCCACAGTGAAGGAAATAGCCAT---GGGGATGACCTGGATCTGCCTCTATT 1549
** * * ** * ******** ** *** * ***** ***** ** ** * **
consensus_6978#0 TGATCTGGGGACAATTGCAGCTGCTACTGATGGTTTCTCAATCAACAACAAGCTCGGTGA 1726
consensus_6978#1 TGGTTTGGAGACAATAGCATCAGCCACAAATGGTTTCTCAGCAGACAACAAACTTGGAGA 1609
** * *** ****** *** * ** ** *********** ******* ** ** **
consensus_6978#0 GGGTGGCTTCGGACCAGTATACAAGGGTAAGCTCGAGGATGGACAAGAAATAGCAGTTAA 1786
consensus_6978#1 AGGTGGCTTTGGGCCAGTATACAAGGGTACACTAGAGGATGGGCAAGAAATAGCAGTTAA 1669
******** ** **************** ** ******** *****************
consensus_6978#0 AACGTTGTCCAAAACATCCGTACAGGGTCTCGACGAATTCAAGAATGAGGTAATGTTGAT 1846
consensus_6978#1 AACACTTTCAAAGACGTCAGTACAGGGTCTTGATGAGTTCAGGAATGAGGTTATGTTGAT 1729
*** * ** ** ** ** *********** ** ** **** ********* ********
consensus_6978#0 AGCTAAACTTCAGCATAGGAATCTTGTTCGGCTTCTCGGCTTCAGCATTAGTGGACAAGA 1906
consensus_6978#1 AGCTAAACTCCAGCATCGAAATCTTGTTCAACTTATTGGCTACAGCGTTTGTGGACAAGA 1789
********* ****** * ********** *** * **** **** ** **********
consensus_6978#0 AAGGATACTTGTGTACGAATACATGGCAAACAAGAGCCTAGACTACTTTCTGTTCG---- 1962
consensus_6978#1 AAAGATGCTTCTATACGAATTTATGGAAAACAAAAGCCTGGACTGTTTCCTGTTTGACAA 1849
** *** *** * ******* **** ****** ***** **** ** ***** *
consensus_6978#0 -----------------------------CGCGATACCGTATAATAGAAGGCATTACTAG 1993
consensus_6978#1 ATCCAAGAGCAAGCTACTTGACTGGCAAACAAGATACCACATAATCGAGGGGATTGCCCG 1909
* ****** ***** ** ** *** * *
consensus_6978#0 AGGTTTACTATATCTTCACCAGGATTCAAGATACAGAATCATCCACAGAGACCTGAAGGC 2053
consensus_6978#1 AGGTTTGCTGTATCTTCACCAGGACTCAAGATATAGAATCATCCACAGAGACCTGAAGAC 1969
****** ** ************** ******** ************************ *
consensus_6978#0 AAGTAATGTTCTTCTTGACAAGGAGATGACTCCCAAAATTTCTGACTTTGGCATGGCAAG 2113
consensus_6978#1 AAGCAACATTCTTCTGGATAAGGAGATGACTCCTAAAATTTCAGACTTTGGTATGGCAAG 2029
*** ** ******* ** ************** ******** ******** ********
consensus_6978#0 AATGTTTGGAAGTGAAGAGACAGAAATCAATACCAGAAAAGTGGTCGGCACATATGGCTA 2173
consensus_6978#1 AATGTTTGGCAGTGACGACACGGAAATAAATACAGTTAGAGTGGTTGGCACATACGGCTA 2089
********* ***** ** ** ***** ***** * ****** ******** *****
consensus_6978#0 TATGTCTCCAGAATATGCAATGGACGGAGTCTTTTCTGTCAAATCAGATGTATTTAGTTT 2233
consensus_6978#1 TATGGCCCCCGAGTACGCAATGGATGGAGTATTTTCAGTGAAATCAGATGTACTTAGTTT 2149
**** * ** ** ** ******** ***** ***** ** ************ *******
consensus_6978#0 TGGAGTTTTACTACTGGAAATAATTAGTGGCAGGAGGAACAGAGGGGTTTATTCATATTC 2293
consensus_6978#1 CGGCGTCATAGTGCTAGAAATCATTTCTGGTAAAAGGAACAGGGGTGTCTACAGCTACTC 2209
** ** ** * ** ***** *** *** * ******** ** ** ** ** **
consensus_6978#0 AAACCACCTAAATCTTCTGGGACATGCATGGAGCTTATGGAATGAAGGAAAAAGCTTGGA 2353
consensus_6978#1 CAGCCACCTAAACCTTCTAGCACGTGCATGGAGCTCATGGAGTGAAGGGAACAGCCTCGA 2269
* ********* ***** * ** *********** ***** ****** ** *** * **
consensus_6978#0 GTTAGCAGATGAAACAATGAATGGCTCGTTCGACTCAGATGAAGTACTCAAATGCATCAG 2413
consensus_6978#1 TCTCGTCGACAAAACACTGAACGGCTCATTCAACCAAGAGGAAGTGCTAAAATGCCTTAA 2329
* * ** ***** **** ***** *** ** *** ***** ** ****** * *
consensus_6978#0 AGTGGGACTCCTATGTGTGCAAGAGAACCCAGATGACCGTCCATTGATGTCTCAGGTGCT 2473
consensus_6978#1 AGTGGGGCTCCTATGTGTCCAGGAGAACCCGGACGACCGTCCTCTCATGTCCCAGGTGCT 2389
****** *********** ** ******** ** ******** * ***** ********
consensus_6978#0 TCTGATGTTAGCTACGACAGATGCTACCACATTGCCAACTCCTAAACAGCCTGGCTTTGC 2533
consensus_6978#1 CCTGATGCTGGCCAGCGCCGATGCCACCTCATTGCCAGATCCCAGGAAGCCTGGGTTCGT 2449
****** * ** * * ***** *** ******** *** * ******* ** *
consensus_6978#0 AGCTAGAAGAATTCTAATGGAAACAGACACATCATCAAGCAAGCCAGACTGCAGCATATT 2593
consensus_6978#1 CGCAAGAAGAGCTGCAACGGA---GGACACGTCGTCGAGCAGACCAGACTGCAGCTTCGT 2506
** ****** * ** *** ***** ** ** **** ************ * *
consensus_6978#0 CGACAGTGCAACAGTTACTATACTTGAAGGTCGATAGGATGTTAATGTGCTAATTGAA-C 2652
consensus_6978#1 GGACAGCATGACCATCACCATGATCGAGGGCAGGTAGGAATATAGGATCGGAGTCGGAGC 2566
***** ** * ** ** * ** ** * ***** ** * * * * * *
consensus_6978#0 TTACTAGGGGAATGTGCATTAC-ATAATGTGCTTTCTTCA-----TCACCGTGTGTT-TG 2705
consensus_6978#1 GCGACATTGTACTGAAGATTACTAGAACGCCTTTGCCTTTGCATTTTACTAGGTATTCTG 2626
* * * ** ***** * ** * ** * * * ** ** ** **
consensus_6978#0 AGCAACA----------------------------------------------------- 2712
consensus_6978#1 TGTAGAATCATATATAGTCTTGTGATTGATTAACCCTAGCACTGAGTTGCGAATTCAATC 2686
* * *
consensus_6978#0 -------------------
consensus_6978#1 CCACCCAAATAACCAGAAA 2705
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||