These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6981#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2570 fasta sequence [ATCAGCTGGCCTTTTGTGACTTTTGTCCATCAATCATACAGTCACGCTCCTTCCTCGGAAATTTATAATCTTCGAATCAGAGATCGATGTCGCGGCGGCCGTCCGTAGCACCGGAGCCGGCTCCGCGGCTGGTCTGCAATGCAACCACGGGTGATCTACCGGCAGGCTGCAACCTCGGCCTGCTGGCCCGTATCGAACTCCTGGTGCTCTTCTGCTCCGCCATCCTCGCGCTCCTCGTCTTCCTCGGCTCCTCCAGGCGCCGGAGCAGCAGCGCCACCGTCCGCCTCGTCGTGTGGGGCGCCTTCACGGTGTCCTACCCGGTGGCGGCCTACACCATCGGCCTCATGCAGTCGTCCCCTTTCCACCACGAGCTCTTCGTGGTCTGGTCCTGCTTCTTCCTCTTCGTCCTCGCCAGCTCCGACTCCATCACCGCCTACACCCTCGCCGACATCAAGAGCCCGGCCACCGTGCTGCTCAACCGAGGCCTCCAGGTCATCTACGTCTCCGTGCTCCTCCACTACTACGCCTCCGTGCTCTCCCCGAAGCTCAAGATCTACCTCTTCATCGTTTGGCTCGTGAGCTTGGGGAAGATCGCGTTGAGCGCCCTCGGCTACCGGCTGGCGCTGCGCTCCGACAGGTTGGAGGCGGACAACAAGCTCGTCGCTGATTACATGACCTACGAGCACGACCTGAGCCGGCAGGGCGGCAGCGACGGAGATCCGGTGACCATGGAAGGGTACAAGTACATAGTCAGAGGGGAGGAGACGGACGTCATGGAGCTAACGGCGCCGGACTACGTCAAGAAGATCAAGGTGGACGGCGCGCGTGCGCTGG-T-GACGGTCGAGAGCGTCTGGCGGTGCAAGGGGCGGTTGCTGATGGGCAGCTCCGTCGCCGACGCCAGCGCCGCCGCGCGACGGGATCTTTGCCTCTCCTTTGCCCTGTTCAAGCTGCTCCGGCGGAGG-TGCAGCAACTATCCCCTGGCCGAGTCCGGCCAACCCAAGACGAGGGACTTTGTCCTCAGGGGCCTCCTCGGACAGGGAAAAGACGACGACGACGACGGCGACGGCGACCGGAGATCAAGACGAGACGGCAGAGCTTTCCGGGTGATCGAAGTGGAGCTCGGCTTCCTCTACGACCTGTTCTACACGAGGTATCCCTTCATCTGCCACGCCGCGGTGAGCACGGCACCGCACCTCGCCATGTGCGCCCTCGTGATGACCATCAGCGTGCTCACCCTCTCCTCCCACTCGCTGCGACACTACCACCCTACTCACCATAGAAGCATCGAGGTCAATGGCGTCAACCTCGACGTCGCCCTCACCATGTTCATCATAGCGCTAGTCATCGTCCTCGAGGCGTACCAGTTCGTCGCCGTGCTCTTCTCCGACTGGCAGAAGGTGAAGATGCTGTGCAGGTACGTCCTCCGGCCGTCATGGCAGGGGAACCCGTTCTTCGAGGCGGTGTTGCGCGTGCTGTGCTACTGCGGCAGTGGCGTGTACTGGAAGAAGACGATGAGCCAGTACTCCATCGTCCGCCACGCCTCTCCTGGCCACGCCGTGAAGGACTGGCTGTCGCGGGCGACTCGCCGGTGGCTGGACAGGCTCATGTTCAACGGCGGCAAGGCGCGATCGGTGAAGGTGTCGGCCGCGGTGGAGAGCGCGCTCGCGTCTGCACTGAGGGATCGCGACGACGATGACGGCGTCCTCGGCGGCGGCGGCCGCGCCACGCTGCGGCAACACAGGCTAGACTGGGCGTGGGGAGGCGCGACGTGGCGCACGTGCGCGCACGCCATTCTCATCTGGCACATCGCCACTTGCCTCTGTGCCATGCAGATGCCGGCGGCAATAACCCACAAGAAGACGCGGCCGCGAGCGAGAAAGGCCGCCGGCGGCGGCGACGGCGACGGCGACCGTGCAGTGGCGACGAGCCTGTCGAGGTACTGCGCTTACCTGGTGTCGTCGGCGCCGGAGCTGTTGCCGGAGCACCAGTACACCACCCGGACGATCGCCGAGGCGGTGCTCCTCGAGCTCCGGGTCTGCCTCCGTGGCTGCGCGTCGGACAAGGAGGTCTTGGACAGGTTGAAGGCGGTGGCGGAGACGGCGACCGCGAGCTCGCCGGAGAGCGGCATCCATGTGCACGGTGCGAGGCTTTGGACACAGCTGATGGTGATCCCGGACCAGGAGATGACGTGGAAGCTCCTGGCCAGGGTGTGGGCGGAGCTGATGCTGTTCGTCACCCCGGCGGACAATGCGACGGCGCACGTCCAGCATTTGACGATGGGCGGCGAGCACATTACCCACCTCTGGGCACTGCTGACACACGCTGGCATCGTCGACCGGCCTAATTCTCCGTCCCCACACCCACATCCGGCGCCGTAAATTGGCACCACTGTATATCGGTCATTATATTCCTCCTTATTGCTGCTATATTTAATTGTGTTCCTCCTTATTACTGTTGTATTTTGTGTCCGCTGAGTACTTCTGTTTTTGAGTTAAATGTTCATGTTTGTTTTGGTGCTCAGTTAGCTTTAATTTGGTGTCTTAGTAGAGACCTTAATTCTAGCTCAAGCA] [+] EMBL AK107164 [ATCAGCTGGCCTTTTGTGACTTTTGTCCATCAATCATACAGTCACGCTCCTTCCTCGGAAATTTATAATCTTCGAATCAGAGATCGATGTCGCGGCGGCCGTCCGTAGCACCGGAGCCGGCTCCGCGGCTGGTCTGCAATGCAACCACGGGTGATCTACCGGCAGGCTGCAACCTCGGCCTGCTGGCCCGTATCGAACTCCTGGTGCTCTTCTGCTCCGCCATCCTCGCGCTCCTCGTCTTCCTCGGCTCCTCCAGGCGCCGGAGCAGCAGCGCCACCGTCCGCCTCGTCGTGTGGGGCGCCTTCACGGTGTCCTACCCGGTGGCGGCCTACACCATCGGCCTCATGCAGTCGTCCCCTTTCCACCACGAGCTCTTCGTGGTCTGGTCCTGCTTCTTCCTCTTCGTCCTCGCCAGCTCCGACTCCATCACCGCCTACACCCTCGCCGACATCAAGAGCCCGGCCACCGTGCTGCTCAACCGAGGCCTCCAGGTCATCTACGTCTCCGTGCTCCTCCACTACTACGCCTCCGTGCTCTCCCCGAAGCTCAAGATCTACCTCTTCATCGTTTGGCTCGTGAGCTTGGGGAAGATCGCGTTGAGCGCCCTCGGCTACCGGCTGGCGCTGCGCTCCGACAGGTTGGAGGCGGACAACAAGCTCGTCGCTGATTACATGACCTACGAGCACGACCTGAGCCGGCAGGGCGGCAGCGACGGAGATCCGGTGACCATGGAAGGGTACAAGTACATAGTCAGAGGGGAGGAGACGGACGTCATGGAGCTAACGGCGCCGGACTACGTCAAGAAGATCAAGGTGGACGGCGCGCGTGCGCTGG T GACGGTCGAGAGCGTCTGGCGGTGCAAGGGGCGGTTGCTGATGGGCAGCTCCGTCGCCGACGCCAGCGCCGCCGCGCGACGGGATCTTTGCCTCTCCTTTGCCCTGTTCAAGCTGCTCCGGCGGAGG TGCAGCAACTATCCCCTGGCCGAGTCCGGCCAACCCAAGACGAGGGACTTTGTCCTCAGGGGCCTCCTCGGACAGGGAAAAGACGACGACGACGACGGCGACGGCGACCGGAGATCAAGACGAGACGGCAGAGCTTTCCGGGTGATCGAAGTGGAGCTCGGCTTCCTCTACGACCTGTTCTACACGAGGTATCCCTTCATCTGCCACGCCGCGGTGAGCACGGCACCGCACCTCGCCATGTGCGCCCTCGTGATGACCATCAGCGTGCTCACCCTCTCCTCCCACTCGCTGCGACACTACCACCCTACTCACCATAGAAGCATCGAGGTCAATGGCGTCAACCTCGACGTCGCCCTCACCATGTTCATCATAGCGCTAGTCATCGTCCTCGAGGCGTACCAGTTCGTCGCCGTGCTCTTCTCCGACTGGCAGAAGGTGAAGATGCTGTGCAGGTACGTCCTCCGGCCGTCATGGCAGGGGAACCCGTTCTTCGAGGCGGTGTTGCGCGTGCTGTGCTACTGCGGCAGTGGCGTGTACTGGAAGAAGACGATGAGCCAGTACTCCATCGTCCGCCACGCCTCTCCTGGCCACGCCGTGAAGGACTGGCTGTCGCGGGCGACTCGCCGGTGGCTGGACAGGCTCATGTTCAACGGCGGCAAGGCGCGATCGGTGAAGGTGTCGGCCGCGGTGGAGAGCGCGCTCGCGTCTGCACTGAGGGATCGCGACGACGATGACGGCGTCCTCGGCGGCGGCGGCCGCGCCACGCTGCGGCAACACAGGCTAGACTGGGCGTGGGGAGGCGCGACGTGGCGCACGTGCGCGCACGCCATTCTCATCTGGCACATCGCCACTTGCCTCTGTGCCATGCAGATGCCGGCGGCAATAACCCACAAGAAGACGCGGCCGCGAGCGAGAAAGGCCGCCGGCGGCGGCGACGGCGACGGCGACCGTGCAGTGGCGACGAGCCTGTCGAGGTACTGCGCTTACCTGGTGTCGTCGGCGCCGGAGCTGTTGCCGGAGCACCAGTACACCACCCGGACGATCGCCGAGGCGGTGCTCCTCGAGCTCCGGGTCTGCCTCCGTGGCTGCGCGTCGGACAAGGAGGTCTTGGACAGGTTGAAGGCGGTGGCGGAGACGGCGACCGCGAGCTCGCCGGAGAGCGGCATCCATGTGCACGGTGCGAGGCTTTGGACACAGCTGATGGTGATCCCGGACCAGGAGATGACGTGGAAGCTCCTGGCCAGGGTGTGGGCGGAGCTGATGCTGTTCGTCACCCCGGCGGACAATGCGACGGCGCACGTCCAGCATTTGACGATGGGCGGCGAGCACATTACCCACCTCTGGGCACTGCTGACACACGCTGGCATCGTCGACCGGCCTAATTCTCCGTCCCCACACCCACATCCGGCGCCGTAAATTGGCACCACTGTATATCGGTCATTATATTCCTCCTTATTGCTGCTATATTTAATTGT ] [+] EMBL C73655 [ ntnCTGGNTNGACGGTCGAGAGCGTCTGGCGNTGCAAGGGGCGGTTGCTGATNGGCAGCTCCGTCGCCGACGCCAGCGCCGCCGCG ANCGGANTCTTTGCCTCTCCTTTGCCCTGTTCAAGCTGCTCCGGCGGAGGTTGCAGCAACTATCCCCTGGCCGAGTCC GCAAGCCCAAGACGAGGGACTTTGT CTCAGGGGCCTCCTCGGACAGGGAAAAGACGACGACGACGACGGCGACGGC ACCGGAGATCAAGACGAGACGGCAGA NTTTCCGGGTGATCGAAGTGGAGCTCGGCTTCCTCTACGACCTGTTCTACACGAGGTATCCCTTCATCTGCCACGCCGCGGTGAG ACGGa ] [+] EMBL AU108182 [ ACTACCACCCTACTCACCATAGAAGCATCGAGGTCAATGGCGTCAACCTCGACGTCGCCCTCACCATGTTCATCATAGCGCTAGTCATCGTCCTCGAGGCGTACCAGTTCGTCGCCGTGCTCTTCTCCGACTGGCAGAAGGTGAAGATGCTGTGCAGGTACGTCCTCCGGCCGTCATGGCAGGGGAACCCGTTCTTCGAGGCGGTGTTGCGCGTGCTGTGCTACTGCGGCAGTGGCGTGTACTGGAAGAAGACGATGAGCCAGTACTCCATCGTCCGCCACGCCTCTCCTGGCCACGCCGTGAAGGACTGGCTGTCGCGGGCGACTCGCCGGTGGCTGGACAGGCTCATGTTCAACGGCGGCAAGGCGCGATCGGTGAAGGTGTCGGCCGCGGTGGAGAGCGCGCTCGCGTCTGCACTGAGGGATCGCGACGACGA ] [-] EMBL CB645737 [ CGGCGGCAATAACCCACAAGAAGACGCGGCCGCGAGCGAGAAAGGCCGCCGGCGGCGGCGACGGCGACGGCGACCGTGCAGTGGCGACGAGCCTGTCGAGGTACTGCGCTTACCTGGTGTCGTCGGCGCCGGAGCTGTTGCCGGAGCACCAGTACACCACCCGGACGATCGCCGAGGCGGTGCTCCTCGAGCTCCGGGTCTGCCTCCGTGGCTGCGCGTCGGACAAGGAGGTCTTGGACAGGTTGAAGGCGGTGGCGGAGACGGCGACCGCGAGCTCGCCGGAGAGCGGCATCCATGTGCACGGTGCGAGGCTTTGGACACAGCTGATGGTGATCCCGGACCAGGAGATGACGTGGAAGCTCCTGGCCAGGGTGTGGGCGGAGCTGATGCTGTTCGTCACCCCGGCGGACAATGCGACGGCGCACGTCCAGCATTTGACGATGGGCGGCGAGCACATTACCCACCTCTGGGCACTGCTGACACACGCTGGCATCGTCGACCGGCCTAATTCTCCGTCCCCACACCCACATCCGGCGCCGTAAATTGGCACCACTGTATATCGGTCATTATATTCCTCCTTATTGCTGCTATATTTAATTGTGTTCCTCCTTATTACTGTTGTATTTTGTGTCCGCTGAGTACTTCTGTTTTTGAGTTAAATGTTCATGTTTGTTTTGGTGCTCAGTTAGCTTTAATTTGGTGTCTTAGTAGAGACCTTAATTCTAGCTCAAGCA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||