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Oryza sativa
cluster # 6981 cluster # 6981       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6981#0 length = 2570 sequences # 4  
consensusID : consensus_6981#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2570
fasta sequence 
                              [ATCAGCTGGCCTTTTGTGACTTTTGTCCATCAATCATACAGTCACGCTCCTTCCTCGGAAATTTATAATCTTCGAATCAGAGATCGATGTCGCGGCGGCCGTCCGTAGCACCGGAGCCGGCTCCGCGGCTGGTCTGCAATGCAACCACGGGTGATCTACCGGCAGGCTGCAACCTCGGCCTGCTGGCCCGTATCGAACTCCTGGTGCTCTTCTGCTCCGCCATCCTCGCGCTCCTCGTCTTCCTCGGCTCCTCCAGGCGCCGGAGCAGCAGCGCCACCGTCCGCCTCGTCGTGTGGGGCGCCTTCACGGTGTCCTACCCGGTGGCGGCCTACACCATCGGCCTCATGCAGTCGTCCCCTTTCCACCACGAGCTCTTCGTGGTCTGGTCCTGCTTCTTCCTCTTCGTCCTCGCCAGCTCCGACTCCATCACCGCCTACACCCTCGCCGACATCAAGAGCCCGGCCACCGTGCTGCTCAACCGAGGCCTCCAGGTCATCTACGTCTCCGTGCTCCTCCACTACTACGCCTCCGTGCTCTCCCCGAAGCTCAAGATCTACCTCTTCATCGTTTGGCTCGTGAGCTTGGGGAAGATCGCGTTGAGCGCCCTCGGCTACCGGCTGGCGCTGCGCTCCGACAGGTTGGAGGCGGACAACAAGCTCGTCGCTGATTACATGACCTACGAGCACGACCTGAGCCGGCAGGGCGGCAGCGACGGAGATCCGGTGACCATGGAAGGGTACAAGTACATAGTCAGAGGGGAGGAGACGGACGTCATGGAGCTAACGGCGCCGGACTACGTCAAGAAGATCAAGGTGGACGGCGCGCGTGCGCTGG-T-GACGGTCGAGAGCGTCTGGCGGTGCAAGGGGCGGTTGCTGATGGGCAGCTCCGTCGCCGACGCCAGCGCCGCCGCGCGACGGGATCTTTGCCTCTCCTTTGCCCTGTTCAAGCTGCTCCGGCGGAGG-TGCAGCAACTATCCCCTGGCCGAGTCCGGCCAACCCAAGACGAGGGACTTTGTCCTCAGGGGCCTCCTCGGACAGGGAAAAGACGACGACGACGACGGCGACGGCGACCGGAGATCAAGACGAGACGGCAGAGCTTTCCGGGTGATCGAAGTGGAGCTCGGCTTCCTCTACGACCTGTTCTACACGAGGTATCCCTTCATCTGCCACGCCGCGGTGAGCACGGCACCGCACCTCGCCATGTGCGCCCTCGTGATGACCATCAGCGTGCTCACCCTCTCCTCCCACTCGCTGCGACACTACCACCCTACTCACCATAGAAGCATCGAGGTCAATGGCGTCAACCTCGACGTCGCCCTCACCATGTTCATCATAGCGCTAGTCATCGTCCTCGAGGCGTACCAGTTCGTCGCCGTGCTCTTCTCCGACTGGCAGAAGGTGAAGATGCTGTGCAGGTACGTCCTCCGGCCGTCATGGCAGGGGAACCCGTTCTTCGAGGCGGTGTTGCGCGTGCTGTGCTACTGCGGCAGTGGCGTGTACTGGAAGAAGACGATGAGCCAGTACTCCATCGTCCGCCACGCCTCTCCTGGCCACGCCGTGAAGGACTGGCTGTCGCGGGCGACTCGCCGGTGGCTGGACAGGCTCATGTTCAACGGCGGCAAGGCGCGATCGGTGAAGGTGTCGGCCGCGGTGGAGAGCGCGCTCGCGTCTGCACTGAGGGATCGCGACGACGATGACGGCGTCCTCGGCGGCGGCGGCCGCGCCACGCTGCGGCAACACAGGCTAGACTGGGCGTGGGGAGGCGCGACGTGGCGCACGTGCGCGCACGCCATTCTCATCTGGCACATCGCCACTTGCCTCTGTGCCATGCAGATGCCGGCGGCAATAACCCACAAGAAGACGCGGCCGCGAGCGAGAAAGGCCGCCGGCGGCGGCGACGGCGACGGCGACCGTGCAGTGGCGACGAGCCTGTCGAGGTACTGCGCTTACCTGGTGTCGTCGGCGCCGGAGCTGTTGCCGGAGCACCAGTACACCACCCGGACGATCGCCGAGGCGGTGCTCCTCGAGCTCCGGGTCTGCCTCCGTGGCTGCGCGTCGGACAAGGAGGTCTTGGACAGGTTGAAGGCGGTGGCGGAGACGGCGACCGCGAGCTCGCCGGAGAGCGGCATCCATGTGCACGGTGCGAGGCTTTGGACACAGCTGATGGTGATCCCGGACCAGGAGATGACGTGGAAGCTCCTGGCCAGGGTGTGGGCGGAGCTGATGCTGTTCGTCACCCCGGCGGACAATGCGACGGCGCACGTCCAGCATTTGACGATGGGCGGCGAGCACATTACCCACCTCTGGGCACTGCTGACACACGCTGGCATCGTCGACCGGCCTAATTCTCCGTCCCCACACCCACATCCGGCGCCGTAAATTGGCACCACTGTATATCGGTCATTATATTCCTCCTTATTGCTGCTATATTTAATTGTGTTCCTCCTTATTACTGTTGTATTTTGTGTCCGCTGAGTACTTCTGTTTTTGAGTTAAATGTTCATGTTTGTTTTGGTGCTCAGTTAGCTTTAATTTGGTGTCTTAGTAGAGACCTTAATTCTAGCTCAAGCA]

[+] EMBL AK107164             [ATCAGCTGGCCTTTTGTGACTTTTGTCCATCAATCATACAGTCACGCTCCTTCCTCGGAAATTTATAATCTTCGAATCAGAGATCGATGTCGCGGCGGCCGTCCGTAGCACCGGAGCCGGCTCCGCGGCTGGTCTGCAATGCAACCACGGGTGATCTACCGGCAGGCTGCAACCTCGGCCTGCTGGCCCGTATCGAACTCCTGGTGCTCTTCTGCTCCGCCATCCTCGCGCTCCTCGTCTTCCTCGGCTCCTCCAGGCGCCGGAGCAGCAGCGCCACCGTCCGCCTCGTCGTGTGGGGCGCCTTCACGGTGTCCTACCCGGTGGCGGCCTACACCATCGGCCTCATGCAGTCGTCCCCTTTCCACCACGAGCTCTTCGTGGTCTGGTCCTGCTTCTTCCTCTTCGTCCTCGCCAGCTCCGACTCCATCACCGCCTACACCCTCGCCGACATCAAGAGCCCGGCCACCGTGCTGCTCAACCGAGGCCTCCAGGTCATCTACGTCTCCGTGCTCCTCCACTACTACGCCTCCGTGCTCTCCCCGAAGCTCAAGATCTACCTCTTCATCGTTTGGCTCGTGAGCTTGGGGAAGATCGCGTTGAGCGCCCTCGGCTACCGGCTGGCGCTGCGCTCCGACAGGTTGGAGGCGGACAACAAGCTCGTCGCTGATTACATGACCTACGAGCACGACCTGAGCCGGCAGGGCGGCAGCGACGGAGATCCGGTGACCATGGAAGGGTACAAGTACATAGTCAGAGGGGAGGAGACGGACGTCATGGAGCTAACGGCGCCGGACTACGTCAAGAAGATCAAGGTGGACGGCGCGCGTGCGCTGG T GACGGTCGAGAGCGTCTGGCGGTGCAAGGGGCGGTTGCTGATGGGCAGCTCCGTCGCCGACGCCAGCGCCGCCGCGCGACGGGATCTTTGCCTCTCCTTTGCCCTGTTCAAGCTGCTCCGGCGGAGG TGCAGCAACTATCCCCTGGCCGAGTCCGGCCAACCCAAGACGAGGGACTTTGTCCTCAGGGGCCTCCTCGGACAGGGAAAAGACGACGACGACGACGGCGACGGCGACCGGAGATCAAGACGAGACGGCAGAGCTTTCCGGGTGATCGAAGTGGAGCTCGGCTTCCTCTACGACCTGTTCTACACGAGGTATCCCTTCATCTGCCACGCCGCGGTGAGCACGGCACCGCACCTCGCCATGTGCGCCCTCGTGATGACCATCAGCGTGCTCACCCTCTCCTCCCACTCGCTGCGACACTACCACCCTACTCACCATAGAAGCATCGAGGTCAATGGCGTCAACCTCGACGTCGCCCTCACCATGTTCATCATAGCGCTAGTCATCGTCCTCGAGGCGTACCAGTTCGTCGCCGTGCTCTTCTCCGACTGGCAGAAGGTGAAGATGCTGTGCAGGTACGTCCTCCGGCCGTCATGGCAGGGGAACCCGTTCTTCGAGGCGGTGTTGCGCGTGCTGTGCTACTGCGGCAGTGGCGTGTACTGGAAGAAGACGATGAGCCAGTACTCCATCGTCCGCCACGCCTCTCCTGGCCACGCCGTGAAGGACTGGCTGTCGCGGGCGACTCGCCGGTGGCTGGACAGGCTCATGTTCAACGGCGGCAAGGCGCGATCGGTGAAGGTGTCGGCCGCGGTGGAGAGCGCGCTCGCGTCTGCACTGAGGGATCGCGACGACGATGACGGCGTCCTCGGCGGCGGCGGCCGCGCCACGCTGCGGCAACACAGGCTAGACTGGGCGTGGGGAGGCGCGACGTGGCGCACGTGCGCGCACGCCATTCTCATCTGGCACATCGCCACTTGCCTCTGTGCCATGCAGATGCCGGCGGCAATAACCCACAAGAAGACGCGGCCGCGAGCGAGAAAGGCCGCCGGCGGCGGCGACGGCGACGGCGACCGTGCAGTGGCGACGAGCCTGTCGAGGTACTGCGCTTACCTGGTGTCGTCGGCGCCGGAGCTGTTGCCGGAGCACCAGTACACCACCCGGACGATCGCCGAGGCGGTGCTCCTCGAGCTCCGGGTCTGCCTCCGTGGCTGCGCGTCGGACAAGGAGGTCTTGGACAGGTTGAAGGCGGTGGCGGAGACGGCGACCGCGAGCTCGCCGGAGAGCGGCATCCATGTGCACGGTGCGAGGCTTTGGACACAGCTGATGGTGATCCCGGACCAGGAGATGACGTGGAAGCTCCTGGCCAGGGTGTGGGCGGAGCTGATGCTGTTCGTCACCCCGGCGGACAATGCGACGGCGCACGTCCAGCATTTGACGATGGGCGGCGAGCACATTACCCACCTCTGGGCACTGCTGACACACGCTGGCATCGTCGACCGGCCTAATTCTCCGTCCCCACACCCACATCCGGCGCCGTAAATTGGCACCACTGTATATCGGTCATTATATTCCTCCTTATTGCTGCTATATTTAATTGT                                                                                                                                     ]
[+] EMBL C73655               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ntnCTGGNTNGACGGTCGAGAGCGTCTGGCGNTGCAAGGGGCGGTTGCTGATNGGCAGCTCCGTCGCCGACGCCAGCGCCGCCGCG ANCGGANTCTTTGCCTCTCCTTTGCCCTGTTCAAGCTGCTCCGGCGGAGGTTGCAGCAACTATCCCCTGGCCGAGTCC GCAAGCCCAAGACGAGGGACTTTGT CTCAGGGGCCTCCTCGGACAGGGAAAAGACGACGACGACGACGGCGACGGC ACCGGAGATCAAGACGAGACGGCAGA NTTTCCGGGTGATCGAAGTGGAGCTCGGCTTCCTCTACGACCTGTTCTACACGAGGTATCCCTTCATCTGCCACGCCGCGGTGAG ACGGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU108182             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACTACCACCCTACTCACCATAGAAGCATCGAGGTCAATGGCGTCAACCTCGACGTCGCCCTCACCATGTTCATCATAGCGCTAGTCATCGTCCTCGAGGCGTACCAGTTCGTCGCCGTGCTCTTCTCCGACTGGCAGAAGGTGAAGATGCTGTGCAGGTACGTCCTCCGGCCGTCATGGCAGGGGAACCCGTTCTTCGAGGCGGTGTTGCGCGTGCTGTGCTACTGCGGCAGTGGCGTGTACTGGAAGAAGACGATGAGCCAGTACTCCATCGTCCGCCACGCCTCTCCTGGCCACGCCGTGAAGGACTGGCTGTCGCGGGCGACTCGCCGGTGGCTGGACAGGCTCATGTTCAACGGCGGCAAGGCGCGATCGGTGAAGGTGTCGGCCGCGGTGGAGAGCGCGCTCGCGTCTGCACTGAGGGATCGCGACGACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB645737             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGGCGGCAATAACCCACAAGAAGACGCGGCCGCGAGCGAGAAAGGCCGCCGGCGGCGGCGACGGCGACGGCGACCGTGCAGTGGCGACGAGCCTGTCGAGGTACTGCGCTTACCTGGTGTCGTCGGCGCCGGAGCTGTTGCCGGAGCACCAGTACACCACCCGGACGATCGCCGAGGCGGTGCTCCTCGAGCTCCGGGTCTGCCTCCGTGGCTGCGCGTCGGACAAGGAGGTCTTGGACAGGTTGAAGGCGGTGGCGGAGACGGCGACCGCGAGCTCGCCGGAGAGCGGCATCCATGTGCACGGTGCGAGGCTTTGGACACAGCTGATGGTGATCCCGGACCAGGAGATGACGTGGAAGCTCCTGGCCAGGGTGTGGGCGGAGCTGATGCTGTTCGTCACCCCGGCGGACAATGCGACGGCGCACGTCCAGCATTTGACGATGGGCGGCGAGCACATTACCCACCTCTGGGCACTGCTGACACACGCTGGCATCGTCGACCGGCCTAATTCTCCGTCCCCACACCCACATCCGGCGCCGTAAATTGGCACCACTGTATATCGGTCATTATATTCCTCCTTATTGCTGCTATATTTAATTGTGTTCCTCCTTATTACTGTTGTATTTTGTGTCCGCTGAGTACTTCTGTTTTTGAGTTAAATGTTCATGTTTGTTTTGGTGCTCAGTTAGCTTTAATTTGGTGTCTTAGTAGAGACCTTAATTCTAGCTCAAGCA]




>consensus_6981#0
ATCAGCTGGCCTTTTGTGACTTTTGTCCATCAATCATACAGTCACGCTCCTTCCTCGGAA
ATTTATAATCTTCGAATCAGAGATCGATGTCGCGGCGGCCGTCCGTAGCACCGGAGCCGG
CTCCGCGGCTGGTCTGCAATGCAACCACGGGTGATCTACCGGCAGGCTGCAACCTCGGCC
TGCTGGCCCGTATCGAACTCCTGGTGCTCTTCTGCTCCGCCATCCTCGCGCTCCTCGTCT
TCCTCGGCTCCTCCAGGCGCCGGAGCAGCAGCGCCACCGTCCGCCTCGTCGTGTGGGGCG
CCTTCACGGTGTCCTACCCGGTGGCGGCCTACACCATCGGCCTCATGCAGTCGTCCCCTT
TCCACCACGAGCTCTTCGTGGTCTGGTCCTGCTTCTTCCTCTTCGTCCTCGCCAGCTCCG
ACTCCATCACCGCCTACACCCTCGCCGACATCAAGAGCCCGGCCACCGTGCTGCTCAACC
GAGGCCTCCAGGTCATCTACGTCTCCGTGCTCCTCCACTACTACGCCTCCGTGCTCTCCC
CGAAGCTCAAGATCTACCTCTTCATCGTTTGGCTCGTGAGCTTGGGGAAGATCGCGTTGA
GCGCCCTCGGCTACCGGCTGGCGCTGCGCTCCGACAGGTTGGAGGCGGACAACAAGCTCG
TCGCTGATTACATGACCTACGAGCACGACCTGAGCCGGCAGGGCGGCAGCGACGGAGATC
CGGTGACCATGGAAGGGTACAAGTACATAGTCAGAGGGGAGGAGACGGACGTCATGGAGC
TAACGGCGCCGGACTACGTCAAGAAGATCAAGGTGGACGGCGCGCGTGCGCTGGTGACGG
TCGAGAGCGTCTGGCGGTGCAAGGGGCGGTTGCTGATGGGCAGCTCCGTCGCCGACGCCA
GCGCCGCCGCGCGACGGGATCTTTGCCTCTCCTTTGCCCTGTTCAAGCTGCTCCGGCGGA
GGTGCAGCAACTATCCCCTGGCCGAGTCCGGCCAACCCAAGACGAGGGACTTTGTCCTCA
GGGGCCTCCTCGGACAGGGAAAAGACGACGACGACGACGGCGACGGCGACCGGAGATCAA
GACGAGACGGCAGAGCTTTCCGGGTGATCGAAGTGGAGCTCGGCTTCCTCTACGACCTGT
TCTACACGAGGTATCCCTTCATCTGCCACGCCGCGGTGAGCACGGCACCGCACCTCGCCA
TGTGCGCCCTCGTGATGACCATCAGCGTGCTCACCCTCTCCTCCCACTCGCTGCGACACT
ACCACCCTACTCACCATAGAAGCATCGAGGTCAATGGCGTCAACCTCGACGTCGCCCTCA
CCATGTTCATCATAGCGCTAGTCATCGTCCTCGAGGCGTACCAGTTCGTCGCCGTGCTCT
TCTCCGACTGGCAGAAGGTGAAGATGCTGTGCAGGTACGTCCTCCGGCCGTCATGGCAGG
GGAACCCGTTCTTCGAGGCGGTGTTGCGCGTGCTGTGCTACTGCGGCAGTGGCGTGTACT
GGAAGAAGACGATGAGCCAGTACTCCATCGTCCGCCACGCCTCTCCTGGCCACGCCGTGA
AGGACTGGCTGTCGCGGGCGACTCGCCGGTGGCTGGACAGGCTCATGTTCAACGGCGGCA
AGGCGCGATCGGTGAAGGTGTCGGCCGCGGTGGAGAGCGCGCTCGCGTCTGCACTGAGGG
ATCGCGACGACGATGACGGCGTCCTCGGCGGCGGCGGCCGCGCCACGCTGCGGCAACACA
GGCTAGACTGGGCGTGGGGAGGCGCGACGTGGCGCACGTGCGCGCACGCCATTCTCATCT
GGCACATCGCCACTTGCCTCTGTGCCATGCAGATGCCGGCGGCAATAACCCACAAGAAGA
CGCGGCCGCGAGCGAGAAAGGCCGCCGGCGGCGGCGACGGCGACGGCGACCGTGCAGTGG
CGACGAGCCTGTCGAGGTACTGCGCTTACCTGGTGTCGTCGGCGCCGGAGCTGTTGCCGG
AGCACCAGTACACCACCCGGACGATCGCCGAGGCGGTGCTCCTCGAGCTCCGGGTCTGCC
TCCGTGGCTGCGCGTCGGACAAGGAGGTCTTGGACAGGTTGAAGGCGGTGGCGGAGACGG
CGACCGCGAGCTCGCCGGAGAGCGGCATCCATGTGCACGGTGCGAGGCTTTGGACACAGC
TGATGGTGATCCCGGACCAGGAGATGACGTGGAAGCTCCTGGCCAGGGTGTGGGCGGAGC
TGATGCTGTTCGTCACCCCGGCGGACAATGCGACGGCGCACGTCCAGCATTTGACGATGG
GCGGCGAGCACATTACCCACCTCTGGGCACTGCTGACACACGCTGGCATCGTCGACCGGC
CTAATTCTCCGTCCCCACACCCACATCCGGCGCCGTAAATTGGCACCACTGTATATCGGT
CATTATATTCCTCCTTATTGCTGCTATATTTAATTGTGTTCCTCCTTATTACTGTTGTAT
TTTGTGTCCGCTGAGTACTTCTGTTTTTGAGTTAAATGTTCATGTTTGTTTTGGTGCTCA
GTTAGCTTTAATTTGGTGTCTTAGTAGAGACCTTAATTCTAGCTCAAGCA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)