cluster # 6996

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Oryza sativa
cluster # 6996 cluster # 6996 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6996#0 length = 355 sequences # 4

consensusID : consensus_6996#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 355
fasta sequence

                              [GAAAAGAACCCCTCTCGACCTCGCAATCAAGCGTGCGCGCGCTCGCTCGCCATCCGCCATGGGAGAAGTCGCCGCGGAGCTCCTGTACGGCATGCCGGCGATGCGGCTTTCATGGCCGGGGCCCGACGGAATCAGCGGCGGCG-GCGCCGAGGCCGCCGGCGGCTGCGGCGCCCTGCTCGCGGAGCTCAGGCAACTGTGGGGGGAGATAGGGAAGAGCAGGGAGGAGAGGGAGCGGACGGTGCGGGAGCTGGAGATGGAGTTCATGCGCGTTTACCGACGCAAGGTCGACGAGGCCACCGCCGAGCGGGCNTCGCTGCACCATTCGCTCGCCGCCGGNAAGGGCGAGATCNCCGCG]

[+] EMBL OSS3969A             [GAAAAGAACCCCTCTCGACCTCGCAATCAAGCGTGCGCGCGCTCGCTCGCCATCCGCCATGGGAGAAGTCGCCGCGGAG TCCTGTACGGCATGCCGGCGATGCGGCTTTCATGGCCGGGGCCCGACGGAATCAGCGGCGGCG GCG CGAGGCCGCCGGCGGCTGCGGCGCCCTGCTCGCGGAG TCAGGCAACTNTGGGGGGAGATAGGGAAGAGCAGGGAGGAGAGGGAGCGGACGGTGCGGGAGCTGGAGATGGAGTTCATGCGCGTTTACCGACGCAAGGTCGACGAGGCCACCGCCGAGCGGGCNTCGCTGCACCATTCGCTCGCCGCCGGNAAGGGCGAGATCNCCGCG]
[+] EMBL CB637248             [        CCCCTCTCGACCTCGCAATCAAGCGTGCGCGCGCTCGCTCGCCATCCGCCATGGGAGAAGTCGCCGCGGAGCTCCTGTACGGCATGCCGGCGATGCGGCTTTCATGGCCGGGGCCCGACGGAATCA CGGCGGCG GCGCCNNAGCCGCCGGCGGCTGCGGCGCCCTGCTCGCGGAGCTCAGGCAACTGTGGGGGGAGATAGGGAAGAGCAGGGAGGAGAGGGAGCGGACGGTGCGGGAGCTGGAAATGGAGTGCATGCGCG                                                                                      ]
[+] EMBL CB640438             [         CCCTCTCGACCTCGCAATCAAGCGTGCGCGCGCTCGCTCGCCATCCGCCATGGGAGAAGTCGCCGCGGAGCTCCTGTACGGCATGCCGGCGATGCGGCTTTCATGGCCGGGGCCCGACGGAATCAGCGGCGGCGNGCGCCGA GCCGCCGGCGGCTGCGGCGCCCTGCTCGCGGAGCTCAGGCAACTGGGGGGGGAGATAGGGAAGAGCAGGGAGGAG                                                                                                                                 ]
[+] EMBL CB637133             [                 ACCTCGCAATCAAGCGTGCGCGCGCTCGCTCGCCATCCGCCATGGGAGAAGTCGCCGCGGAGCTCCTGTACGGCATGCCGGCGATGCGGCTTTCATGGCCGGGGCCCGACGGAATCAGCGGCGGCG Gnc                                                                                                                                                                                                                 ]




>consensus_6996#0
GAAAAGAACCCCTCTCGACCTCGCAATCAAGCGTGCGCGCGCTCGCTCGCCATCCGCCAT
GGGAGAAGTCGCCGCGGAGCTCCTGTACGGCATGCCGGCGATGCGGCTTTCATGGCCGGG
GCCCGACGGAATCAGCGGCGGCGGCGCCGAGGCCGCCGGCGGCTGCGGCGCCCTGCTCGC
GGAGCTCAGGCAACTGTGGGGGGAGATAGGGAAGAGCAGGGAGGAGAGGGAGCGGACGGT
GCGGGAGCTGGAGATGGAGTTCATGCGCGTTTACCGACGCAAGGTCGACGAGGCCACCGC
CGAGCGGGCNTCGCTGCACCATTCGCTCGCCGCCGGNAAGGGCGAGATCNCCGCG

clustalw multiple alignements is not computed in this case