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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7016#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 4142 fasta sequence
[CGCGCCGCCGCCGCCGCTTCTCCTCCAGCCGCCGGCGGGGCCTCCCTTCCTACCCAAGCCTCCGCCGCCGTTCCCATCTCCTCGTCCTCCGTGCCACCGCCGGCGCCTCTTCCGCTGAATCCATCTCCACCTCCTCACCTATTCGCTAACGCCGCCTCCCATCCTCTCTTCTCTCCGGGCTCCGGCTAGATCCAAGTCGGCGTCGAGATCCAGGGCTCGAAAACCCCTCACCTATCCAAGGATTTCAGCGACGAGGGCTATGGTTCACTGCTGGGCATTGCTGCCTGTCTTTGCTGTCGATTTGACATAGTCCTTCCTAATCTTCTTCAGCATCACGACCACATCCTTCATTTCCATCCTTTGCTCTGGGGAGTCAGCCGAGCAGAGCAAGCCCAGCTCGAAGACTGGCTTAAGGAATCCATCAATGCTACTGGTAGAACAAGAGGTGTCCTGTAGAAGCTGGCCATCGACAACATGGACAAGATCTATAGGAAATGCCCAGTGAACCCACTGCCTGATGCTCAGATCTCCCACAAACATGGCATCTGTGGGTCTCTTCCTAGTGAACACTTCAAGTAGCATGATCCCATAGCTGAACACATCGCTCTTCCGTGACGCTTTTCCAAGAACCCCATACTCTGCACAAGAAAATTAGATTAATGACAACTGATTGCACCACTTAATTGTTGTGAAAAGATCAACTGGGTTGAGTAAGAGTACAAAAGCTACTAAGTACCTGGTGCCATGTAACCAATTGTTCCTGGCATGCTTGCAGAGATCGTAGAGTTATCATCGCCTAGTAACAACCTCGCAATGCCAAAGTCTGCCACATGTGCCGTCATTTCATCATCGAATAGCACATTACTAGGCTTCAAATCACAGTGTACGACCACCTCATAGTGCTCATGGTGCAGGTATTCCATTGCCATTGACACATCTAGCATAATATCCAACCTCTCGAGAAAGCCTAACTGCATCCTTTCTTCCGAGTGTAGGAGTGCTTCTAAGCTACCCTGAGGCATGTACTGAAGAACCAATGCTCTGAACTCCAGGTTGGAGCATGTGTTCAATATCTTTATCAAGTTGCGATGTCGAGCCATTCGAAGCACACGACACTCAGTATCAAAGCTTCTCATGGCATGTTCCAGATGGTTGTGTATAACTTTTATGGCAACCACCAAACCGCTACTCAACTGGCCCTTAAAAACTTTTCCGAAGCTTCCAGATCCCAACATATTGTCTTCACTGAAATTATCGGTAGCGCGAACAAGCTCATGGTAGGAGAGTAATTGGTGGCTGATCATGTCAAGCATACCAGAAGAAATATTTTGATGCTTAACTTTCTTTCTAATTATTCCATATAGGCAACAAGTTACCGCTGCAACTACTATGATTATACCCGGGAGTAAAATATACTTTAGTATGTGTCGATTTCTTTTGGGAGAGGTTGTTTGGCATGGAGAAAATCCTAAACGGACAACACCACATAGCCCTGAGTTCCCTGCCAAGGATTGCAACGTGATGTTTGAGAAGACACCTCCTTCTGGTATCTGACCTTCAAGCTTATTAAAAGACAGATTTAGGTTAGCAAGGCTGGTAAAATTGGCCAGGTATTTTGGGATGGTACCAGAAATGTTGTTATGGGATATATCCAAAATTTGCAAGCCAGATAGGTTACTGAAAGAGTCTGGAATGGAATCATGGAATTCATTGACAGATAAGTTCAGGTATCCTAACATCTGAAGATGTCCAATTGAATCAGGGAGGCTACCGACAAAGCGGTTCATATAGATATCCATGTAGTTAATTTGTTTTATATTGCCTATATCAACTGGCAATTCACCACTGAAGAAATTTTGAGATAGATCTAGCAGGATGAGCCTATCAAGATGAAATAAGCTCGGTGGTACTGTTGATGATAATTGGTTATGACCTAATGCTAGGTGCTCTAACTTGGTCAAATTACTGGGGTCCAATTGTAAGCCAGAGAACTTGTTGGTTCCAATGTATATTAATTCAATATTATTTAGCATGCCAGTGTTTAATGGGATGGAGCCAGACAAGTTATTTGTCTCCAAGTTAAGGAATACAAGATTCCTCATCATCATGATTGATTCTGGAATTTTACCATGCAGTTGGTTTCCCCCGAGATCTAGCACCTGAATCCCAGTTAAATTCGAAATCATAGCTGGAAGTTCACCGGTAAAGCTGTTCTCAAATGCAGAGAATACTCGCAACAGACTTGACAGATTCCCTACACTGCCTGGGAGGCTCCCGGTGAAATGATTCGAGTAGATGTAAAGGGTAGACAGATTTATACAGTTGGAAAGTATGGATAGAAAGTAACCGATATCTCCCTGTAGGTTGTTTTGTGCAATACTGAGTTGCTTCAACGAGTTCATGTTACCAATTGTTGCCGGTACTGAGCCATCCAACTGGTTCTCTGCCAATGAAAGGATTGTCAATGCTGATAGGTTACCAAGACAAGCAGGAATGGGACCTGTTAGTTGATTGGTTGTAAGATCCAGCACTGAAAGTTGGCC-TAGTTGTCCAATACCCACAGGGATGGCCCCTATTAGGTTGCACATTTCAAGGCCTAGTCTGGTTAGCATGGTGAGGTTGCTAAGTGCAGCAGGGATTGGGCCAGCATCAAGGTGATTCCTACTCAAAGAAACATCACTGAGATTCGTCGACTTGGCCAGCCACGAAGGGAAAACACCCTCAAATAGATCGTCACCGACGCGAAGAACTTGGAGGTACGGACACGCTGCGAGTCCTGGTGGAATTTGACCGGTGAATCTATTATGGGAGATTGAGAACCACTGCAGAACCGGGAGGCTGAAACTTGTGTTGCCCGGGATGGAGCCGGTCAAGCTATTAAAGCCAAGATCAACAACAGTTAACCTAGACATGTTGAAGATGGCTTGTGGCACTGGCCCAGTGAGATTATTGTACTGCAGCTCAAGCAACTCGAGCATTGGCAAAGAGCCGATGCAACCTGGTATAGGTCCTGACAGGCTGTTGTTGCCAATACTGAGATAAGCTAACAAAGGCGTGTTGTTGAATAGACTGTCCGGTATCGAGCCAGTAAGGTAATTCCCAATGAGATCAATGCTGCGAAGGCGGCGCAAGGCCTGTAGTTCTATTGGGATTGGACCGGATAGCTGGTTCGACGGGAGGTGGAGTAGTTGAAGCCTCATGAGGTTCCCTATGGTGGCTGGGATGCCACCTGAAAGGGCATTGTGGCCAAGATCAATGAGCTTGAGGCGATGTAGCCTTCCTATATCATCCGGCACCGAGCCCGTGAGGCCGGTATCGGTGAGGTTGAGGACGGAGAGGAAAGAAATGTTACCGAGGTGAGGCCCGAGCTCTCCTTGGAGAGGAATGCCCGGCAGCTCCAGGGCGGTGACGCGCTGCCGGTGGCGGCTGCACGAGACACCCACCCACTGGCAGAACGGTGTGCCAGCGGTCCAGTTGCCGGCAAGGATGTTGTCAGGATCGGAGAAGTGCACTTTCAAAGCCAGAAGCGCAGCGAGGTCGGTGTCGCTGCCATTGCTCTTGCTCAGACCTAGAGAAGAAGCAGAAGCCACAATGGACAGAGCAATCAACAGCGCAACGGAGATCCATACCGGCAATCCAATCGCCATGTCTGGGTGTGTGTGATGCATTGACAAGGAGTGAAGTAACTTCACTGGACGAACAAGTTGTGGTTTTATTTAGCAACTCGGTGCTTTCAACGTCTAGGACGAAGACCTTGACTGTTGCTCTCAGAAAGTGCAAGAAACTGTAACACTTTTGATAATTAGGAATGCTAGTACCACAGACTTGCTGGAAAATAATGTCATCACAGACTATATATTCAACCGATCACAGCGTGCACGACAAGCTAGATATGAGAGCTGTCTCTCTCTCAGCCATCAGCCATACACTCACTGAAAAATAATTTTCTGTCAAACAACTTGAAGGCAACCTTAGTCTTTGTCGATTGGGTGGTTAGTGGCGGGCCTTATCAGGAAAAATGTCTAGTACAAATTTAGAAACTACTGTTGGGTACATAATAGATGTCTGAGATTTGTCCACGTCACCCTGACTATTTTTTTTTACTCCAAATTTGTTACTCCTAGACTTATCTATGCGTAATC]
[+] EMBL AK069609 [CGCGCCGCCGCCGCCGCTTCTCCTCCAGCCGCCGGCGGGGCCTCCCTTCCTACCCAAGCCTCCGCCGCCGTTCCCATCTCCTCGTCCTCCGTGCCACCGCCGGCGCCTCTTCCGCTGAATCCATCTCCACCTCCTCACCTATTCGCTAACGCCGCCTCCCATCCTCTCTTCTCTCCGGGCTCCGGCTAGATCCAAGTCGGCGTCGAGATCCAGGGCTCGAAAACCCCTCACCTATCCAAGGATTTCAGCGACGAGGGCTATGGTTCACTGCTGGGCATTGCTGCCTGTCTTTGCTGTCGATTTGACATAGTCCTTCCTAATCTTCTTCAGCATCACGACCACATCCTTCATTTCCATCCTTTGCTCTGGGGAGTCAGCCGAGCAGAGCAAGCCCAGCTCGAAGACTGGCTTAAGGAATCCATCAATGCTACTGGTAGAACAAGAGGTGTCCTGTAGAAGCTGGCCATCGACAACATGGACAAGATCTATAGGAAATGCCCAGTGAACCCACTGCCTGATGCTCAGATCTCCCACAAACATGGCATCTGTGGGTCTCTTCCTAGTGAACACTTCAAGTAGCATGATCCCATAGCTGAACACATCGCTCTTCCGTGACGCTTTTCCAAGAACCCCATACTCTGCACAAGAAAATTAGATTAATGACAACTGATTGCACCACTTAATTGTTGTGAAAAGATCAACTGGGTTGAGTAAGAGTACAAAAGCTACTAAGTACCTGGTGCCATGTAACCAATTGTTCCTGGCATGCTTGCAGAGATCGTAGAGTTATCATCGCCTAGTAACAACCTCGCAATGCCAAAGTCTGCCACATGTGCCGTCATTTCATCATCGAATAGCACATTACTAGGCTTCAAATCACAGTGTACGACCACCTCATAGTGCTCATGGTGCAGGTATTCCATTGCCATTGACACATCTAGCATAATATCCAACCTCTCGAGAAAGCCTAACTGCATCCTTTCTTCCGAGTGTAGGAGTGCTTCTAAGCTACCCTGAGGCATGTACTGAAGAACCAATGCTCTGAACTCCAGGTTGGAGCATGTGTTCAATATCTTTATCAAGTTGCGATGTCGAGCCATTCGAAGCACACGACACTCAGTATCAAAGCTTCTCATGGCATGTTCCAGATGGTTGTGTATAACTTTTATGGCAACCACCAAACCGCTACTCAACTGGCCCTTAAAAACTTTTCCGAAGCTTCCAGATCCCAACATATTGTCTTCACTGAAATTATCGGTAGCGCGAACAAGCTCATGGTAGGAGAGTAATTGGTGGCTGATCATGTCAAGCATACCAGAAGAAATATTTTGATGCTTAACTTTCTTTCTAATTATTCCATATAGGCAACAAGTTACCGCTGCAACTACTATGATTATACCCGGGAGTAAAATATACTTTAGTATGTGTCGATTTCTTTTGGGAGAGGTTGTTTGGCATGGAGAAAATCCTAAACGGACAACACCACATAGCCCTGAGTTCCCTGCCAAGGATTGCAACGTGATGTTTGAGAAGACACCTCCTTCTGGTATCTGACCTTCAAGCTTATTAAAAGACAGATTTAGGTTAGCAAGGCTGGTAAAATTGGCCAGGTATTTTGGGATGGTACCAGAAATGTTGTTATGGGATATATCCAAAATTTGCAAGCCAGATAGGTTACTGAAAGAGTCTGGAATGGAATCATGGAATTCATTGACAGATAAGTTCAGGTATCCTAACATCTGAAGATGTCCAATTGAATCAGGGAGGCTACCGACAAAGCGGTTCATATAGATATCCATGTAGTTAATTTGTTTTATATTGCCTATATCAACTGGCAATTCACCACTGAAGAAATTTTGAGATAGATCTAGCAGGATGAGCCTATCAAGATGAAATAAGCTCGGTGGTACTGTTGATGATAATTGGTTATGACCTAATGCTAGGTGCTCTAACTTGGTCAAATTACTGGGGTCCAATTGTAAGCCAGAGAACTTGTTGGTTCCAATGTATATTAATTCAATATTATTTAGCATGCCAGTGTTTAATGGGATGGAGCCAGACAAGTTATTTGTCTCCAAGTTAAGGAATACAAGATTCCTCATCATCATGATTGATTCTGGAATTTTACCATGCAGTTGGTTTCCCCCGAGATCTAGCACCTGAATCCCAGTTAAATTCGAAATCATAGCTGGAAGTTCACCGGTAAAGCTGTTCTCAAATGCAGAGAATACTCGCAACAGACTTGACAGATTCCCTACACTGCCTGGGAGGCTCCCGGTGAAATGATTCGAGTAGATGTAAAGGGTAGACAGATTTATACAGTTGGAAAGTATGGATAGAAAGTAACCGATATCTCCCTGTAGGTTGTTTTGTGCAATACTGAGTTGCTTCAACGAGTTCATGTTACCAATTGTTGCCGGTACTGAGCCATCCAACTGGTTCTCTGCCAATGAAAGGATTGTCAATGCTGATAGGTTACCAAGACAAGCAGGAATGGGACCTGTTAGTTGATTGGTTGTAAGATCCAGCACTGAAAGTTGGCC TAGTTGTCCAATACCCACAGGGATGGCCCCTATTAGGTTGCACATTTCAAGGCCTAGTCTGGTTAGCATGGTGAGGTTGCTAAGTGCAGCAGGGATTGGGCCAGCATCAAGGTGATTCCTACTCAAAGAAACATCACTGAGATTCGTCGACTTGGCCAGCCACGAAGGGAAAACACCCTCAAATAGATCGTCACCGACGCGAAGAACTTGGAGGTACGGACACGCTGCGAGTCCTGGTGGAATTTGACCGGTGAATCTATTATGGGAGATTGAGAACCACTGCAGAACCGGGAGGCTGAAACTTGTGTTGCCCGGGATGGAGCCGGTCAAGCTATTAAAGCCAAGATCAACAACAGTTAACCTAGACATGTTGAAGATGGCTTGTGGCACTGGCCCAGTGAGATTATTGTACTGCAGCTCAAGCAACTCGAGCATTGGCAAAGAGCCGATGCAACCTGGTATAGGTCCTGACAGGCTGTTGTTGCCAATACTGAGATAAGCTAACAAAGGCGTGTTGTTGAATAGACTGTCCGGTATCGAGCCAGTAAGGTAATTCCCAATGAGATCAATGCTGCGAAGGCGGCGCAAGGCCTGTAGTTCTATTGGGATTGGACCGGATAGCTGGTTCGACGGGAGGTGGAGTAGTTGAAGCCTCATGAGGTTCCCTATGGTGGCTGGGATGCCACCTGAAAGGGCATTGTGGCCAAGATCAATGAGCTTGAGGCGATGTAGCCTTCCTATATCATCCGGCACCGAGCCCGTGAGGCCGGTATCGGTGAGGTTGAGGACGGAGAGGAAAGAAATGTTACCGAGGTGAGGCCCGAGCTCTCCTTGGAGAGGAATGCCCGGCAGCTCCAGGGCGGTGACGCGCTGCCGGTGGCGGCTGCACGAGACACCCACCCACTGGCAGAACGGTGTGCCAGCGGTCCAGTTGCCGGCAAGGATGTTGTCAGGATCGGAGAAGTGCACTTTCAAAGCCAGAAGCGCAGCGAGGTCGGTGTCGCTGCCATTGCTCTTGCTCAGACCTAGAGAAGAAGCAGAAGCCACAATGGACAGAGCAATCAACAGCGCAACGGAGATCCATACCGGCAATCCAATCGCCATGTCTGGGTGTGTGTGATGCATTGACAAGGAGTGAAGTAACTTCACTGGACGAACAAGTTGTGGTTTTATTTAGCAACTCGGTGCTTTCAACGTCTAGGACGAAGACCTTGACTGTTGCTCTCAGAAAGTGCAAGAAACTGTAACACTTTTGATAATTAGGAATGCTAGTACCACAGACTTGCTGGAAAATAATGTCATCACAGACTATATATTCAACCGATCACAGCGTGCACGACAAGCTAGATATGAGAGCTGTCTCTCTCTCAGCCATCAGCCATACACTCACTGAAAAATAATTTTCTGTCAAACAACTTGAAGGCAACCTTAGTCTTTGTCGATTGGGTGGTTAGTGGCGGGCCTTATCAGGAAAAATGTCTAGTACAAATTTAGAAACTACTGTTGGGTACATAATAGATGTCTGAGATTTGTCCACGTCACCCTGACTATTTTTTTTTACTCCAAATTTGTTACTCCTAGACTTATCTATGCGTAATC]
[+] EMBL CB659735 [ GGCCTTAGTTGTCCAATACCCACAGGGATGGCCCCTATTAGGTTGCACATTTCAAGGCCTAGTCTGGTTAGCATGGTGAGGTTGCTAAGTGCAGCAGGGATTGGGCCAGCATCAAGGTGATTCCTACTCAAAGAAACATCACTGAGATTCGTCGACTTGGCCAGCCACGAAGGGAAAACACCCTCAAATAGATTGTCACCGACGCGAAGAACTTGGAGGTACGGACACGCTGCGAGTCCTGGTGGAATTTGACCGGTGAATCTATTATGGGAGATTGAGAACCACTGCAGAACCGGGAGGCTGAAACTTGTGTTGCCCGGGATGGAGCCGGTCAAGCTATTAAAGCCAAGATCAACAACAGTTAACCTAGACATGTTGAAGATGGCTTGTGGCACTGGCCCAGTGAGATTATTGTACTGCAGCTCAAGCAACTCGAGCATTGGCAAAGAGCCGATGCAACCTGGTATAGGTCCTGACAGGCTGTTGTTGCCAATACTGAGATAAGCTAACAAAGGCGTGTTGTTGAATAGACTGTCCGGTATCGAGCCAGTAAGGTAATTCCCAATGAGATCAATGCTGCGAAGGCGGCGCAAGGCCTGTAGTTCTATTGGGATTGGACCGGATAGCTGGTTCGACGGGAGGTGGAGTAGTTGAAGCCTCATGAGGTTCCCTATGGTGGCTGGGATGCCACCTGAAAGGGCATTGTGGCCAAGATCAATGAGCTTGAGGCGATGTACCCTTCCTAT ]
[-] EMBL CB659736 [ TCCGGTATCGAGCCAGTAAGGTAATTCCCAATGAGATCAATGCTGCGAAGGCGGCGCAAGGCCTGTAGTTCTATTGGGATTGGACCGGATAGCTGGTTCGACGGGAGGTGGAGTAGTTGAAGCCTCATGAGGTTCCCTATGGTGGCTGGGATGCCACCTGAAAGGGCATTGTGGCCAAGATCAATGAGCTTGAGGCGATGTAGCCTTCCTATATCATCCGGCACCGAGCCCGTGAGGCCGGTATCGGTGAGGTTGAGGACGGAGAGGAAAGAAATGTTACCGAGGTGAGGCCCGAGCTCTCCTTGGAGAGGAATGCCCGGCAGCTCCAGGGCGGTGACGCGCTGCCGGTGGCGGCTGCACGAGACACCCACCCACTGGCAGAACGGTGTGCCAGCGGTCCAGTTGCCGGCAAGGATGTTGTCAGGATCGGAGAAGTGCACTTTCAAAGCCAGAAGCGCAGCGAGGTCGGTGTCGCTGCCATTGCTCTTGCTCAGACCTAGAGAAGAAGCAGAAGCCACAATGGACAGAGCAATCAACAGCGCAACGGAGATCCATACCGGCAATCCAATCGCCATGTCTGGGTGTGTGTGATGCATTGACAAGGAGTGAAGTAACTTCACTGGACGAACAAGTTGTGGTTTTATTTAGCAACTCGGTGCTTTCAACGTCTAGGACGAAGACCTTGACTGTTGCTCTCAGAAAGTGCAAGAAACTGTAACACTTTTGATAATTAGGAATGCTAGTACCACAGACTTGCTGGAAAATAATGTCATCACAGACTATAT ]
consensusID : consensus_7016#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 851 fasta sequence
[ATTCCTTTACTTGTTCTGAATGCAGGAGTGCTTCTAAGCTACCCTCGTGCATGTACTGAAGTACGAGTGCTCTGAAGTCCAGGTTGGAACAAGTGTTCAGAATCTTTATCAGGTTGTGATGTCGAGCAATTCGGAGTACACGACACTCGGTGTCAAAGCTTCTCATGGCATGTTCCAGATGCTGGTGTATAACTTTTATGGCAACCACCATACCGTTGCTCAACTGTCCCTTAAAAACTTTTCCAAAGCTTCCGAAGCCCAACATGTTATCATCACTGAAATCATCGGTTGCACGAAGAAGCTCATGATAGGACAGAAATTGATGGCTGATAAGGTCAGCCATACCAGCAGAAATCTTTTGATGGTTAGCTTTCTTTCTAATCATTGCATACAAGCAACAAGCTACAACTCCAACTACTATGATTATAGTCGGTAGCAAGTATTTTATCATGTGACCATTTCTCTTGGGGGAGGTGGTTTGGCATGGTGGGAATCCTAAACGGGCAGCACCACATAGCCCTGAGTTCCCCACCAAGTATTGTAAAGTGATGTTTGCAAAGATACCTCCTTCCGGTATTTGACCATGTAGTTTATTGAAAGATAGGTTCAAGCTAACAAGGGTCGTAAAATTAGCCAAGTAGTTTGGGATGGTACCAGAAATACTGTTATGGGATATGTCCAAAGTTTGCAAGCCAGTTAAATTACCAAAAGAGTCTGGAACAGAATCATAGAATTCGTTAGCTGATAGATTCAGGTGTGTTAACATCTGAAGTTCTCCTATCGAATCTGGGATGCTGCCAGAAAAGCTGTTGTCAGAGAGATCTATGATGGGTATTTGCTTCAAGTACCCT]
[+] EMBL CB622892 [ATTCCTTTACTTGTTCTGAATGCAGGAGTGCTTCTAAGCTACCCTCGTGCATGTACTGAAGTACGAGTGCTCTGAAGTCCAGGTTGGAACAAGTGTTCAGAATCTTTATCAGGTTGTGATGTCGAGCAATTCGGAGTACACGACACTCGGTGTCAAAGCTTCTCATGGCATGTTCCAGATGCTGGTGTATAACTTTTATGGCAACCACCATACCGTTGCTCAACTGTCCCTTAAAAACTTTTCCAAAGCTTCCGAAGCCCAACATGTTATCATCACTGAAATCATCGGTTGCACGAAGAAGCTCATGATAGGACAGAAATTGATGGCTGATAAGGTCAGCCATACCAGCAGAAATCTTTTGATGGTTAGCTTTCTTTCTAATCATTGCATACAAGCAACAAGCTACAACTCCAACTACTATGATTATAGTCGGTAGCAAGTATTTTATCATGTGACCATTTCTCTTGGGGGAGGTGGTTTGGCATGGTGGGAATCCTAAACGGGCAGCACCACATAGCCCTGAGTTCCCCACCAAGTATTGTAAAGTGATGTTTGCAAAGATACCTCCTTCCGGTATTTGACCATGTAGTTTATTGAAAGATAGGTTCAAGCTAACAAGGGTCGTAAAATTAGCCAAGTAGTTTGGGATGGTACCAGAAATACTGTTATGGGATATGTCCAAAGTTTGCAAGCCAGTTAAATTACCAAAAGAGTCTGGAACAGAATCATAGAATTCGTTAGCTGATAGATTCAGGTGTGTTAACATCTGAAGTTCTCCTATCGAATCTGGGATGCTGCCAGAAAAGCTGTTGTCAGAGAGATCTATGATGGGTATTTGCTTCAAGTACCCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7016#0 CGCGCCGCCGCCGCCGCTTCTCCTCCAGCCGCCGGCGGGGCCTCCCTTCCTACCCAAGCC 60
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TCCGCCGCCGTTCCCATCTCCTCGTCCTCCGTGCCACCGCCGGCGCCTCTTCCGCTGAAT 120
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 CCATCTCCACCTCCTCACCTATTCGCTAACGCCGCCTCCCATCCTCTCTTCTCTCCGGGC 180
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TCCGGCTAGATCCAAGTCGGCGTCGAGATCCAGGGCTCGAAAACCCCTCACCTATCCAAG 240
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GATTTCAGCGACGAGGGCTATGGTTCACTGCTGGGCATTGCTGCCTGTCTTTGCTGTCGA 300
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TTTGACATAGTCCTTCCTAATCTTCTTCAGCATCACGACCACATCCTTCATTTCCATCCT 360
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TTGCTCTGGGGAGTCAGCCGAGCAGAGCAAGCCCAGCTCGAAGACTGGCTTAAGGAATCC 420
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 ATCAATGCTACTGGTAGAACAAGAGGTGTCCTGTAGAAGCTGGCCATCGACAACATGGAC 480
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 AAGATCTATAGGAAATGCCCAGTGAACCCACTGCCTGATGCTCAGATCTCCCACAAACAT 540
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GGCATCTGTGGGTCTCTTCCTAGTGAACACTTCAAGTAGCATGATCCCATAGCTGAACAC 600
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 ATCGCTCTTCCGTGACGCTTTTCCAAGAACCCCATACTCTGCACAAGAAAATTAGATTAA 660
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TGACAACTGATTGCACCACTTAATTGTTGTGAAAAGATCAACTGGGTTGAGTAAGAGTAC 720
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 AAAAGCTACTAAGTACCTGGTGCCATGTAACCAATTGTTCCTGGCATGCTTGCAGAGATC 780
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GTAGAGTTATCATCGCCTAGTAACAACCTCGCAATGCCAAAGTCTGCCACATGTGCCGTC 840
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 ATTTCATCATCGAATAGCACATTACTAGGCTTCAAATCACAGTGTACGACCACCTCATAG 900
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TGCTCATGGTGCAGGTATTCCATTGCCATTGACACATCTAGCATAATATCCAACCTCTCG 960
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 AGAAAGCCTAACTGCATCCTTTCTTCCGAGTGTAGGAGTGCTTCTAAGCTACCCTGAGGC 1020
consensus_7016#1 ----------ATTCCTTTACTTGTTCTGAATGCAGGAGTGCTTCTAAGCTACCCTCGTGC 50
* * * * ** *** ** ** ********************** **
consensus_7016#0 ATGTACTGAAGAACCAATGCTCTGAACTCCAGGTTGGAGCATGTGTTCAATATCTTTATC 1080
consensus_7016#1 ATGTACTGAAGTACGAGTGCTCTGAAGTCCAGGTTGGAACAAGTGTTCAGAATCTTTATC 110
*********** ** * ********* *********** ** ******* *********
consensus_7016#0 AAGTTGCGATGTCGAGCCATTCGAAGCACACGACACTCAGTATCAAAGCTTCTCATGGCA 1140
consensus_7016#1 AGGTTGTGATGTCGAGCAATTCGGAGTACACGACACTCGGTGTCAAAGCTTCTCATGGCA 170
* **** ********** ***** ** *********** ** ******************
consensus_7016#0 TGTTCCAGATGGTTGTGTATAACTTTTATGGCAACCACCAAACCGCTACTCAACTGGCCC 1200
consensus_7016#1 TGTTCCAGATGCTGGTGTATAACTTTTATGGCAACCACCATACCGTTGCTCAACTGTCCC 230
*********** * ************************** **** * ******** ***
consensus_7016#0 TTAAAAACTTTTCCGAAGCTTCCAGATCCCAACATATTGTCTTCACTGAAATTATCGGTA 1260
consensus_7016#1 TTAAAAACTTTTCCAAAGCTTCCGAAGCCCAACATGTTATCATCACTGAAATCATCGGTT 290
************** ******** * ******** ** ** ********** ******
consensus_7016#0 GCGCGAACAAGCTCATGGTAGGAGAGTAATTGGTGGCTGATCATGTCAAGCATACCAGAA 1320
consensus_7016#1 GCACGAAGAAGCTCATGATAGGACAGAAATTGATGGCTGATAAGGTCAGCCATACCAGCA 350
** **** ********* ***** ** ***** ******** * **** ******** *
consensus_7016#0 GAAATATTTTGATGCTTAACTTTCTTTCTAATTATTCCATATAGGCAACAAGTTACCGCT 1380
consensus_7016#1 GAAATCTTTTGATGGTTAGCTTTCTTTCTAATCATTGCATACAAGCAACAAGCTACAACT 410
***** ******** *** ************* *** **** * ******** *** **
consensus_7016#0 GCAACTACTATGATTATACCCGGGAGTAAAATATACTTTAGTATGTGTCGATTTCTTTTG 1440
consensus_7016#1 CCAACTACTATGATTATAGTCGGTAGCAAG---TATTTTATCATGTGACCATTTCTCTTG 467
***************** *** ** ** ** **** ***** * ****** ***
consensus_7016#0 GGAGAGGTTGTTTGGCATGGAGAAAATCCTAAACGGACAACACCACATAGCCCTGAGTTC 1500
consensus_7016#1 GGGGAGGTGGTTTGGCATGGTGGGAATCCTAAACGGGCAGCACCACATAGCCCTGAGTTC 527
** ***** *********** * ************ ** ********************
consensus_7016#0 CCTGCCAAGGATTGCAACGTGATGTTTGAGAAGACACCTCCTTCTGGTATCTGACCTTCA 1560
consensus_7016#1 CCCACCAAGTATTGTAAAGTGATGTTTGCAAAGATACCTCCTTCCGGTATTTGACCATGT 587
** ***** **** ** ********** **** ********* ***** ***** *
consensus_7016#0 AGCTTATTAAAAGACAGATTTAGGTTAGCAAGGCTGGTAAAATTGGCCAGGTATTTTGGG 1620
consensus_7016#1 AGTTTATTGAAAGATAGGTTCAAGCTAACAAGGGTCGTAAAATTAGCCAAGTAGTTTGGG 647
** ***** ***** ** ** * * ** ***** * ******** **** *** ******
consensus_7016#0 ATGGTACCAGAAATGTTGTTATGGGATATATCCAAAATTTGCAAGCCAGATAGGTTACTG 1680
consensus_7016#1 ATGGTACCAGAAATACTGTTATGGGATATGTCCAAAGTTTGCAAGCCAGTTAAATTACCA 707
************** ************* ****** ************ ** ****
consensus_7016#0 AAAGAGTCTGGAATGGAATCATGGAATTCATTGACAGATAAGTTCAGGTATCCTAACATC 1740
consensus_7016#1 AAAGAGTCTGGAACAGAATCATAGAATTCGTTAGCTGATAGATTCAGGTGTGTTAACATC 767
************* ******* ****** ** * **** ******* * *******
consensus_7016#0 TGAAGATGTCCAATTGAATCAGGGAGGCTACCGACAAAGCGGTTCATATAGATATCCATG 1800
consensus_7016#1 TGAAGTTCTCCTATCGAATCTGGGATGCTGCCAGAAAAGCTGTTGTCAGAGAGATCTATG 827
***** * *** ** ***** **** *** ** ***** *** * *** *** ***
consensus_7016#0 TAGTTAATTTGTTTTATATTGCCTATATCAACTGGCAATTCACCACTGAAGAAATTTTGA 1860
consensus_7016#1 ATGGGTATTTGCTTCAAGTACCCT------------------------------------ 851
* ***** ** * * ***
consensus_7016#0 GATAGATCTAGCAGGATGAGCCTATCAAGATGAAATAAGCTCGGTGGTACTGTTGATGAT 1920
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 AATTGGTTATGACCTAATGCTAGGTGCTCTAACTTGGTCAAATTACTGGGGTCCAATTGT 1980
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 AAGCCAGAGAACTTGTTGGTTCCAATGTATATTAATTCAATATTATTTAGCATGCCAGTG 2040
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TTTAATGGGATGGAGCCAGACAAGTTATTTGTCTCCAAGTTAAGGAATACAAGATTCCTC 2100
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 ATCATCATGATTGATTCTGGAATTTTACCATGCAGTTGGTTTCCCCCGAGATCTAGCACC 2160
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TGAATCCCAGTTAAATTCGAAATCATAGCTGGAAGTTCACCGGTAAAGCTGTTCTCAAAT 2220
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GCAGAGAATACTCGCAACAGACTTGACAGATTCCCTACACTGCCTGGGAGGCTCCCGGTG 2280
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 AAATGATTCGAGTAGATGTAAAGGGTAGACAGATTTATACAGTTGGAAAGTATGGATAGA 2340
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 AAGTAACCGATATCTCCCTGTAGGTTGTTTTGTGCAATACTGAGTTGCTTCAACGAGTTC 2400
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 ATGTTACCAATTGTTGCCGGTACTGAGCCATCCAACTGGTTCTCTGCCAATGAAAGGATT 2460
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GTCAATGCTGATAGGTTACCAAGACAAGCAGGAATGGGACCTGTTAGTTGATTGGTTGTA 2520
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 AGATCCAGCACTGAAAGTTGGCCTAGTTGTCCAATACCCACAGGGATGGCCCCTATTAGG 2580
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TTGCACATTTCAAGGCCTAGTCTGGTTAGCATGGTGAGGTTGCTAAGTGCAGCAGGGATT 2640
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GGGCCAGCATCAAGGTGATTCCTACTCAAAGAAACATCACTGAGATTCGTCGACTTGGCC 2700
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 AGCCACGAAGGGAAAACACCCTCAAATAGATCGTCACCGACGCGAAGAACTTGGAGGTAC 2760
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GGACACGCTGCGAGTCCTGGTGGAATTTGACCGGTGAATCTATTATGGGAGATTGAGAAC 2820
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 CACTGCAGAACCGGGAGGCTGAAACTTGTGTTGCCCGGGATGGAGCCGGTCAAGCTATTA 2880
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 AAGCCAAGATCAACAACAGTTAACCTAGACATGTTGAAGATGGCTTGTGGCACTGGCCCA 2940
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GTGAGATTATTGTACTGCAGCTCAAGCAACTCGAGCATTGGCAAAGAGCCGATGCAACCT 3000
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GGTATAGGTCCTGACAGGCTGTTGTTGCCAATACTGAGATAAGCTAACAAAGGCGTGTTG 3060
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TTGAATAGACTGTCCGGTATCGAGCCAGTAAGGTAATTCCCAATGAGATCAATGCTGCGA 3120
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 AGGCGGCGCAAGGCCTGTAGTTCTATTGGGATTGGACCGGATAGCTGGTTCGACGGGAGG 3180
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TGGAGTAGTTGAAGCCTCATGAGGTTCCCTATGGTGGCTGGGATGCCACCTGAAAGGGCA 3240
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TTGTGGCCAAGATCAATGAGCTTGAGGCGATGTAGCCTTCCTATATCATCCGGCACCGAG 3300
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 CCCGTGAGGCCGGTATCGGTGAGGTTGAGGACGGAGAGGAAAGAAATGTTACCGAGGTGA 3360
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GGCCCGAGCTCTCCTTGGAGAGGAATGCCCGGCAGCTCCAGGGCGGTGACGCGCTGCCGG 3420
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TGGCGGCTGCACGAGACACCCACCCACTGGCAGAACGGTGTGCCAGCGGTCCAGTTGCCG 3480
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GCAAGGATGTTGTCAGGATCGGAGAAGTGCACTTTCAAAGCCAGAAGCGCAGCGAGGTCG 3540
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GTGTCGCTGCCATTGCTCTTGCTCAGACCTAGAGAAGAAGCAGAAGCCACAATGGACAGA 3600
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GCAATCAACAGCGCAACGGAGATCCATACCGGCAATCCAATCGCCATGTCTGGGTGTGTG 3660
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TGATGCATTGACAAGGAGTGAAGTAACTTCACTGGACGAACAAGTTGTGGTTTTATTTAG 3720
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 CAACTCGGTGCTTTCAACGTCTAGGACGAAGACCTTGACTGTTGCTCTCAGAAAGTGCAA 3780
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GAAACTGTAACACTTTTGATAATTAGGAATGCTAGTACCACAGACTTGCTGGAAAATAAT 3840
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GTCATCACAGACTATATATTCAACCGATCACAGCGTGCACGACAAGCTAGATATGAGAGC 3900
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TGTCTCTCTCTCAGCCATCAGCCATACACTCACTGAAAAATAATTTTCTGTCAAACAACT 3960
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TGAAGGCAACCTTAGTCTTTGTCGATTGGGTGGTTAGTGGCGGGCCTTATCAGGAAAAAT 4020
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GTCTAGTACAAATTTAGAAACTACTGTTGGGTACATAATAGATGTCTGAGATTTGTCCAC 4080
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 GTCACCCTGACTATTTTTTTTTACTCCAAATTTGTTACTCCTAGACTTATCTATGCGTAA 4140
consensus_7016#1 ------------------------------------------------------------
consensus_7016#0 TC 4142
consensus_7016#1 --
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||