cluster # 7020

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Oryza sativa
cluster # 7020 cluster # 7020 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7020#0 length = 733 sequences # 4

consensusID : consensus_7020#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 733
fasta sequence

                              [AAGAGAGAAGTTGAGAATAGAGAGGGGAATGGGATCGGGGATGGAGGCGGCCCGGCGTGTGCTGGAGCATCCGACTCCGACGGACGCGTCGTCGGCGGCGGCGCTGCCCTCCGGGTTCTACGACGCCTTCGTGCTGAGGGGCATCCGCGTGGAGGCCGCGGAGCCCGGCCGCCTCCTCTGCCGCTTCACCGTCCCCTCCCGACTCCTGAATTCGGGCGGCTTCCTGCACGGCGGCGCCACGGCCTCGCTCATTCACCTCGTCGCCTCCGCCGTCTTCCACACCACCGGCAACAGCAGCTCTAGCTCTAGCTCTACCTCGCCCCTGGAGATGAACATCTCCTACTTGGATGCAGCTTTCCCCGATGAAGAGATTGAGATCGAAGCAAAGGTTCTTCGTGCCGGCAAGGCAGTTGGGGTGGCGCTCGTGGACCTCAAGAAGAAATCGGGCAAACTCATTGCTCAAGCCCGCTACTCCAACTACCTTGCACCATCTAGCAAACTCTAGTAATCATCTGTAATAGGAGTATAGGAAACCAATTCGCCAAACCAAGAGTGAGTTCATCATCCAT-CCATCCATCTAGGATCAGGATAGATAACTCTACT-CCTATTCCTATTTATTTATTTATGTTAAAAGCATCCTGATACTGCCGTGTAGTGTTTCTATCTATCTCTGTGTAACAGTGTGTGTATTACACTACTATATATACTCCATATAAGAGAGAATCGCAATCAG]

[+] EMBL AK063656             [AAGAGAGAAGTTGAGAATAGAGAGGGGAATGGGATCGGGGATGGAGGCGGCCCGGCGTGTGCTGGAGCATCCGACTCCGACGGACGCGTCGTCGGCGGCGGCGCTGCCCTCCGGGTTCTACGACGCCTTCGTGCTGAGGGGCATCCGCGTGGAGGCCGCGGAGCCCGGCCGCCTCCTCTGCCGCTTCACCGTCCCCTCCCGACTCCTGAATTCGGGCGGCTTCCTGCACGGCGGCGCCACGGCCTCGCTCATTCACCTCGTCGCCTCCGCCGTCTTCCACACCACCGGCAACAGCAGCTCTAGCTCTAGCTCTACCTCGCCCCTGGAGATGAACATCTCCTACTTGGATGCAGCTTTCCCCGATGAAGAGATTGAGATCGAAGCAAAGGTTCTTCGTGCCGGCAAGGCAGTTGGGGTGGCGCTCGTGGACCTCAAGAAGAAATCGGGCAAACTCATTGCTCAAGCCCGCTACTCCAACTACCTTGCACCATCTAGCAAACTCTAGTAATCATCTGTAATAGGAGTATAGGAAACCAATTCGCCAAACCAAGAGTGAGTTCATCATCCAT CCATCCATCTAGGATCAGGATAGATAACTCTACT CCTATTCCTATTTATTTATTTATGTTAAAAGCATCCTGATACTGCCGTGTAGTGTTTCTATCTATCTCTGTGTAACAGTGTGTGTATTACACTACTATATATACTCCATATAAGAGAGAATC        ]
[+] EMBL CA756355             [             AGAATAGAGAGGGGAATGGGATCGGGGATGGAGGCGGCCCGGCGTGTGCTGGAGCATCCGACTCCGACGGACGCGTCGTCGGCGGCGGCGCTGCCCTCCGGGTTCTACGACGCCTTCGTGCTGAGGGGCATCCGCGTGGAGGCCGCGGAGCCCGGCCGCCTCCTCTGCCGCTTCACCGTCCCCTCCCGACTCCTGAATTCGGGCGGCTTCCTGCACGGCGGCGCCACGGCCTCGCTCATTCACCTCGTCGCCTCCGCCGTCTTCCACACCACCGGCAACAGCAGCTCTAGCTCTAGCTCTACCTCGCCCCTGGAGATGAACATCTCCTACTTGGATGCAGCTTTCCCCGATGAAGAGATTGAGATCGAAGCAAAGGTTCTTCGTGCCGGCAAGGCAGTTGGGGTGGCGCTCGTGGACCTCAAGAAGAAATCGGGCAAACTCATTGCTCAAGCCCGCTACTCCCACTACCTTGCACCATCTAGCAAACTCTAGTAATCATCTGTAATAGGAGTATAGGAAACCAATTCGCCGAACCAAGAGTGAGTTCATCATCCATCCCCTCCATCTAGGATCAGGATAGATAACTCTACTCCCTA TCCTAT                                                                                                                       ]
[+] EMBL AU198137             [                           AATGGGATCGGGGATGGAGGCGGCCCGGCGTGTGCTGGAGCATCCGACTCCGACGGACGCGTCGTCGGCGGCGGCGCTGCCCTCCGGGTTCTACGACGCCTTCGTGCTGAGGGGCATCCGCGTGGAGGCCGCGGAGCCCGGCCGCCTCCTCTGCCGCTTCACCGTCCCCTCCCGACTCCTGAATTCGGGCGGCTTCCTGCACGGCGGCGCCACGGCCTCGCTCATTCACCTCGTCGCCTCCGCCGTCTTCCACACCACCGGCAACAGCAGCTCTAGCTCTAGCTCTACCTCGCCCCTGGAGATGAACATCTCCTACTTGGATGCAGCTTTCCCCGATGAAGAGATTGAGATCGAAGCAAAGGTTCTTCGTGCCGGCAAGGCAGTTGGGGTGGCGCTCGTGGACCTCAAGAAGAAATCGGGCAAACTCAT                                                                                                                                                                                                                                                                                       ]
[-] EMBL D42635               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCTCAAGCCCGCTACTCCAACTACCTTGCACCATCTAGCAAACTCTAGTAATCATCTGTAATAGGGGNATAGGAAACCAATTCGCCAAACCAAGAGTGAGTTCATCATCCAT CCATCCATCTAGGATCAGGATAGATAACTCTACT CCTATTCCTATTTATTTATTTATGTTAAAAGCATCCTGATACTGCCGNGTAGTGTTTCTATCTATCTCTGTGTAACAGTGTGNGTATTACACTACTATATATACTCCATATAAGAGAGAATCGCAATCAG]




>consensus_7020#0
AAGAGAGAAGTTGAGAATAGAGAGGGGAATGGGATCGGGGATGGAGGCGGCCCGGCGTGT
GCTGGAGCATCCGACTCCGACGGACGCGTCGTCGGCGGCGGCGCTGCCCTCCGGGTTCTA
CGACGCCTTCGTGCTGAGGGGCATCCGCGTGGAGGCCGCGGAGCCCGGCCGCCTCCTCTG
CCGCTTCACCGTCCCCTCCCGACTCCTGAATTCGGGCGGCTTCCTGCACGGCGGCGCCAC
GGCCTCGCTCATTCACCTCGTCGCCTCCGCCGTCTTCCACACCACCGGCAACAGCAGCTC
TAGCTCTAGCTCTACCTCGCCCCTGGAGATGAACATCTCCTACTTGGATGCAGCTTTCCC
CGATGAAGAGATTGAGATCGAAGCAAAGGTTCTTCGTGCCGGCAAGGCAGTTGGGGTGGC
GCTCGTGGACCTCAAGAAGAAATCGGGCAAACTCATTGCTCAAGCCCGCTACTCCAACTA
CCTTGCACCATCTAGCAAACTCTAGTAATCATCTGTAATAGGAGTATAGGAAACCAATTC
GCCAAACCAAGAGTGAGTTCATCATCCATCCATCCATCTAGGATCAGGATAGATAACTCT
ACTCCTATTCCTATTTATTTATTTATGTTAAAAGCATCCTGATACTGCCGTGTAGTGTTT
CTATCTATCTCTGTGTAACAGTGTGTGTATTACACTACTATATATACTCCATATAAGAGA
GAATCGCAATCAG

clustalw multiple alignements is not computed in this case