These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7025#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1598 fasta sequence [TCGGCCGTCGCGCGCCG-CGC-AA-CCTCCATGGAATGGCCGCTCTCCACCTCCACGCCCTCATCGCCGGCGGCGGCGGCGCCACCACCGTCCCCCATCTCCGGCAGATCCACGCCCATCTCCTCACCTCCGGCCGCTTCCCCTCCCTCGGCCCCGTCCTCCTCCGCCGCCTCATTTCGCTGCCCAATCCCCACCTCCACCTCGCCCACCGTCTCCTCCTCTCCCTCCCCTCCCCATCCCTCGAC-CTCTTCAACCTCCTCCTTCCCCCGCTCGCCTCCTCGCCGGACCCCTCCACCGCCGCCGCCCTCTTCCTTCGCCTCCGCCGCGGGGGTCTCCGCCCCGACGCGCACACGCTCCCGCACGTCCTCAAGGCGCTCGCGCGCCTCGCCCCGGGATCCCTCCCCGTTGTCGGATCCGTGCACTCGGAGGCCGTCAAGGACGGCCTCGCCTCCGCGGTGGTGTACGTCCCGAACGCGCTCATGGCCGCGTACTCGGCCTGTGGGCAACTGGAGCGCGCCGTGCAGGTGTTCGACGAAATGCCGCGCCGGACCGTCGTGTCCTGGAACACCGCGCTCACCGCCTGCGCGGGCAACGGCCGCCACGAGCTGTGCGTCGAGCTGTTCGCGGAGATGCTAGAGGCTGGTTCCGTGCCGGACCCGACCACGTTCGTGGTCATGCTGTCCGCCGCGGCCGAGCTGGGCAACCTGGCGCTCGGCAAGTGGGCGCATGGACAGGTTGTTTCCCGGAGGCTGGACATGACGCTTCAGCTTGGGACGGCGGCAGTGAACATGTACTCCAAGTGTGCCACGGTGAGTTATGCCCTGCGCTTGTTCGAGAGGATGCCCGCGAGGAATGTCTGGACATGGACTGCCATGATCGTAGGGTTTGCGCAGAATGGTTTGGCTCAGGAAGCGCTGGAGCTGTTTGACAGGATGAAACTCTCAAAGATCATACCCAATTATGTCACATTTCTTGGTCTGCTTTGTGCATGTAGCCATGCTGGCCTGGTTGATGAGGGGCGCCGGTTCTTCCACGAAATGCAGCATGTTTATGGTATTGTGCCGATGATGACGCACTACAGCGCCATGGTTGATGTCCTAGGCCGCAACGGTCTTCTCCAGGAAGCTTATGACTTTGTTGTAGGAATGCCAGTCGAGGCTGACCCAGTTGTGTGGAGGACATTATTGGCAGCCTGCCAGCTGCATAGCTCCAAGGACTGTATTGAGATCATTGACAAGGTGCAGGGCAAACTGCTGGAGCTAGAGCCCCGGAGAAGCGGGAACTACGTCATGGTTTCAAACATCTACTGCGAAATTGGATCATGGGACGAGGCAGCGAAGGCAAGGAGGGTGATGAGGGAAGGAGGGATGAAGAAGGTTGCGGGAGAGAGTTGTGTTGAGGTGGGAGGACGGGTGCATCGGTTCATCTTCGGGGATGATTCTTGCCCTGAATTTCATGGGGCTTGTAGGATTCTCCATGAATTGAATCTCAACATGAGAAAATGTGAACCTATTGACCCAATCTTATTTACTGATGATGCTGACTAGCTTTCAAATTTCGTGCATTCTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL C74579 [TCGGCCGTCGCGCGCCGNCGCNAANCCTCCATGGAATGGCCGCTCTCCACCTCCACGCCCTCATCGCCGGCNG NGCGGCGCCACCACCGTNCCCCATCTCCGGCAGATCCACGCCCATCTCCTCACCTCCGGCCGCTTCCCCTCCCTCGGCCCCGTCCTCCTCCGCCGCCTCATTTCGCTGCCCAATCCCCACCTCCAACTCG CCACCGTCTCCTCCTCTCCCT CCCTCCCAATCCTTCGACTCT TTCAAacntctt ] [+] EMBL AK102254 [ CCG CGC AA CCTCCATGGAATGGCCGCTCTCCACCTCCACGCCCTCATCGCCGGCGGCGGCGGCGCCACCACCGTCCCCCATCTCCGGCAGATCCACGCCCATCTCCTCACCTCCGGCCGCTTCCCCTCCCTCGGCCCCGTCCTCCTCCGCCGCCTCATTTCGCTGCCCAATCCCCACCTCCACCTCGCCCACCGTCTCCTCCTCTCCCTCCCCTCCCCATCCCTCGAC CTCTTCAACCTCCTCCTTCCCCCGCTCGCCTCCTCGCCGGACCCCTCCACCGCCGCCGCCCTCTTCCTTCGCCTCCGCCGCGGGGGTCTCCGCCCCGACGCGCACACGCTCCCGCACGTCCTCAAGGCGCTCGCGCGCCTCGCCCCGGGATCCCTCCCCGTTGTCGGATCCGTGCACTCGGAGGCCGTCAAGGACGGCCTCGCCTCCGCGGTGGTGTACGTCCCGAACGCGCTCATGGCCGCGTACTCGGCCTGTGGGCAACTGGAGCGCGCCGTGCAGGTGTTCGACGAAATGCCGCGCCGGACCGTCGTGTCCTGGAACACCGCGCTCACCGCCTGCGCGGGCAACGGCCGCCACGAGCTGTGCGTCGAGCTGTTCGCGGAGATGCTAGAGGCTGGTTCCGTGCCGGACCCGACCACGTTCGTGGTCATGCTGTCCGCCGCGGCCGAGCTGGGCAACCTGGCGCTCGGCAAGTGGGCGCATGGACAGGTTGTTTCCCGGAGGCTGGACATGACGCTTCAGCTTGGGACGGCGGCAGTGAACATGTACTCCAAGTGTGCCACGGTGAGTTATGCCCTGCGCTTGTTCGAGAGGATGCCCGCGAGGAATGTCTGGACATGGACTGCCATGATCGTAGGGTTTGCGCAGAATGGTTTGGCTCAGGAAGCGCTGGAGCTGTTTGACAGGATGAAACTCTCAAAGATCATACCCAATTATGTCACATTTCTTGGTCTGCTTTGTGCATGTAGCCATGCTGGCCTGGTTGATGAGGGGCGCCGGTTCTTCCACGAAATGCAGCATGTTTATGGTATTGTGCCGATGATGACGCACTACAGCGCCATGGTTGATGTCCTAGGCCGCAACGGTCTTCTCCAGGAAGCTTATGACTTTGTTGTAGGAATGCCAGTCGAGGCTGACCCAGTTGTGTGGAGGACATTATTGGCAGCCTGCCAGCTGCATAGCTCCAAGGACTGTATTGAGATCATTGACAAGGTGCAGGGCAAACTGCTGGAGCTAGAGCCCCGGAGAAGCGGGAACTACGTCATGGTTTCAAACATCTACTGCGAAATTGGATCATGGGACGAGGCAGCGAAGGCAAGGAGGGTGATGAGGGAAGGAGGGATGAAGAAGGTTGCGGGAGAGAGTTGTGTTGAGGTGGGAGGACGGGTGCATCGGTTCATCTTCGGGGATGATTCTTGCCCTGAATTTCATGGGGCTTGTAGGATTCTCCATGAATTGAATCTCAACATGAGAAAATGTGAACCTATTGACCCAATCTTATTTACTGATGATGCTG ] [+] EMBL AK102867 [ A CCTCCATGGAATGGCCGCTCTCCACCTCCACGCCCTCATCGCCGGCGGCGGCGGCGCCACCACCGTCCCCCATCTCCGGCAGATCCACGCCCATCTCCTCACCTCCGGCCGCTTCCCCTCCCTCGGCCCCGTCCTCCTCCGCCGCCTCATTTCGCTGCCCAATCCCCACCTCCACCTCGCCCACCGTCTCCTCCTCTCCCTCCCCTCCCCATCCCTCGAC CTCTTCAACCTCCTCCTTCCCCCGCTCGCCTCCTCGCCGGACCCCTCCACCGCCGCCGCCCTCTTCCTTCGCCTCCGCCGCGGGGGTCTCCGCCCCGACGCGCACACGCTCCCGCACGTCCTCAAGGCGCTCGCGCGCCTCGCCCCGGGATCCCTCCCCGTTGTCGGATCCGTGCACTCGGAGGCCGTCAAGGACGGCCTCGCCTCCGCGGTGGTGTACGTCCCGAACGCGCTCATGGCCGCGTACTCGGCCTGTGGGCAACTGGAGCGCGCCGTGCAGGTGTTCGACGAAATGCCGCGCCGGACCGTCGTGTCCTGGAACACCGCGCTCACCGCCTGCGCGGGCAACGGCCGCCACGAGCTGTGCGTCGAGCTGTTCGCGGAGATGCTAGAGGCTGGTTCCGTGCCGGACCCGACCACGTTCGTGGTCATGCTGTCCGCCGCGGCCGAGCTGGGCAACCTGGCGCTCGGCAAGTGGGCGCATGGACAGGTTGTTTCCCGGAGGCTGGACATGACGCTTCAGCTTGGGACGGCGGCAGTGAACATGTACTCCAAGTGTGCCACGGTGAGTTATGCCCTGCGCTTGTTCGAGAGGATGCCCGCGAGGAATGTCTGGACATGGACTGCCATGATCGTAGGGTTTGCGCAGAATGGTTTGGCTCAGGAAGCGCTGGAGCTGTTTGACAGGATGAAACTCTCAAAGATCATACCCAATTATGTCACATTTCTTGGTCTGCTTTGTGCATGTAGCCATGCTGGCCTGGTTGATGAGGGGCGCCGGTTCTTCCACGAAATGCAGCATGTTTATGGTATTGTGCCGATGATGACGCACTACAGCGCCATGGTTGATGTCCTAGGCCGCAACGGTCTTCTCCAGGAAGCTTATGACTTTGTTGTAGGAATGCCAGTCGAGGCTGACCCAGTTGTGTGGAGGACATTATTGGCAGCCTGCCAGCTGCATAGCTCCAAGGACTGTATTGAGATCATTGACAAGGTGCAGGGCAAACTGCTGGAGCTAGAGCCCCGGAGAAGCGGGAACTACGTCATGGTTTCAAACATCTACTGCGAAATTGGATCATGGGACGAGGCAGCGAAGGCAAGGAGGGTGATGAGGGAAGGAGGGATGAAGAAGGTTGCGGGAGAGAGTTGTGTTGAGGTGGGAGGACGGGTGCATCGGTTCATCTTCGGGGATGATTCTTGCCCTGAATTTCATGGGGCTTGTAGGATTCTCCATGAATTGAATCTCAACATGAGAAAATGTGAACCTATTGACCCAATCTTATTTACTGATGATGCTG ] [+] EMBL AU094848 [ GTCATGGTTTCAAACATCTACTGCGAAATTGGATCATGGGACGAGGCAGCGAAGGCAAGGAGGGTGATGAGGGAAGGAGGGATGAAGAAGGTTGCGGGAGAGAGTTGTGTTGAGGTGGGAGGACGGGTGCATCGGTTCATCTTCGGGGATGATTCTTGCCCTGAATTTCATGGGGCTTGTAGGATTCTCCATGAATTGAATNTCAACATGAGAAAATGTGAACCTATTGACCCAATCTTATTTACTGATGATGCTGACTAGCTTTCAAATTTCGTGCATTCTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||