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Oryza sativa
cluster # 7040 cluster # 7040       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7040#0 length = 2248 sequences # 2  
 consensus_7040#1 length = 1561 sequences # 2  
consensusID : consensus_7040#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2248
fasta sequence 
                              [GCTAGCTCGTCCACTCTCCTCTACTAGCAGCAGCAGTAGAAGACAACACACACGCAGCAGCAGCTGCAGCAAGGCAGTAGGAGAGGAGTTGGAGGGAGGAGAGGGAGCTCCAAGAATCACCAGAGAGCGAGCAAGAGAGAGGTGAGAAGTAAGGTGAGCTCAGAAGGATTTGGTAAGGGATCTCATTATGCAGACTTCAAAAACCAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTCTCCGGCAACACCACGGTCATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGCAGGGATCACACCAACAAGAACCACTCCAGAGAGGAGCCCTAAGGTCACCGAGCGTCGGTCACCACGAAGCCCAATTACTGAGAAGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGTCAGCCAGCTGCAAGATGAGCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACGAAGACGCCACACACAACAGGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTCAAAGCTCGAGGACCTACAGCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACTCCAGGAACTGCGGAAGGTCTCACTGGAGCGTGACCGTGCTTGGGAGTCTGAGCTCGAGGCTGTGAAGAAGCAGCAGTCAGTGGATTCAGCTGCTCTGAGCTCAGCCTTGTCTGAAATTCAGAGGTTGAAGCAGCAGCTGGGGGCCACCACAGAGTCTGATGCAGCTCGTGCCAAGCAATGCGAGTTTGCGGAGTCTGAGCTCGAGGGCTTGAAGCAGGAGATGGAGCTCCGGCTTGCGACCATCGAGGGCCTGAAGGTAAACGTTGGCGAGAGCGACAAGGCTGTAGCTGAGGCGAACGCGGTGGCAGCTGAGACCAAGAAGCAGCTTGAGATGGCACAAGCTACTATTGACTCGCTGCTTGCTGAGGGTGCCCGGTTGCAAGAATGCCTGAGGTCGAAGGACGCAGAGCTCGGCCAGTCCATGGCTCGATTAGCCACACTGGAGGAAGATCTGAAGAAGGCACATAACAAGGATGATGTTGATGGCAGCTTTGGCAGCCCTGATCATGGTGAAGCTGTGGAGAAGGTGGTGGTAACTATCCCCAATGGCAATGGCAGCTGTGGTGGTTCTGGCGCAGAGATTGAGCAGCTGCGGACGGCGCTCGAGGTGGCTGAGATTAGGTACCAGGAAGAACAAACTCGCACGACGATCGAGACGAAGACCGCCTACGAAATGCTGGAGAATGCCAAGTCAGAGTACGACCGCAGAGTGCGCGATCTTGAGCTGGAGCTGAAGAGCAAGAACGATGAGCTCACTGAAGCGAAGGCCACTTTGGCTGTCAGGTGTGACGGGAAGAGCGATGTGATGCAGCCAGAGCTTGAGGCGAAGCTGATGAAGTCGATCACCGATGCGACGGAGCTGAAGGCGAGCCTGATGGACAAGGAGACGGCGCTGCAGAGCGTGATGGAGGAGAACGAGACGCTCAAGTCGGAGGCGGGGAAGAAGGCGGCGGAGGTGCAGCGGAGGTACGAGGCGGCGGTGGCGGAGCTGGAGCTGGCCAAGGCGGCGGAGCAGGACGTCCGGATGCGGCTCGGGTACGTGACGGAGGAGGCCGACAAGAGCAGCCGGCGCGCCGCCAGGGCGTCGGAGCAGCTGGACGCGGCGCAGGCGGCCAGCGTCGAGATGGAGGCCGAGCTGCGGCGCCTCCGGGTGCAGTCTGACCAGTGGCGCAAGGCGGCCGAGGCAGCGGCGGCGGCGCTGGGAGGAGGCGGTGGCGGCATTGGCAGGAACGTGGAGCGGACGGGGTCTCTGGAGCCGGCGGAGTACACCAACTCCATGATCGGCGGGAAGCTGGCGAGCTCGCCGTTCTCCGACGAGCCGGAGGAGGAGTCGCCGAAGCGGCGCAACAGCGGCGTGCTCCGGCGGATGAGCGGGCTGTGGAAGAAGAGCCCCAAGTGACCATCGACGCCATGGACAGCTTGGTGTGGTGTGTGTACTAGAAAGAACTGAAACTGACTAGCTAGGCTGAGCTGATCTGATCACGCCATGGATGGGTTTAGCTGCAAACACTGTGAATCAAAGCTAGTTAAGTTAATTACTACTGGTTGGTTAGTTGGTTTTGCTGCTGTGGTCGCAGTAAAAAAAGAATGTTAAGAACTCTTGTAATGATGTTGGAGATGAGGAGCATCTACATTTTGGGCTGCATGC]

[+] EMBL AK101972             [GCTAGCTCGTCCACTCTCCTCTACTAGCAGCAGCAGTAGAAGACAACACACACGCAGCAGCAGCTGCAGCAAGGCAGTAGGAGAGGAGTTGGAGGGAGGAGAGGGAGCTCCAAGAATCACCAGAGAGCGAGCAAGAGAGAGGTGAGAAGTAAGGTGAGCTCAGAAGGATTTGGTAAGGGATCTCATTATGCAGACTTCAAAAACCAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTCTCCGGCAACACCACGGTCATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGCAGGGATCACACCAACAAGAACCACTCCAGAGAGGAGCCCTAAGGTCACCGAGCGTCGGTCACCACGAAGCCCAATTACTGAGAAGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGTCAGCCAGCTGCAAGATGAGCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACGAAGACGCCACACACAACAGGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTCAAAGCTCGAGGACCTACAGCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACTCCAGGAACTGCGGAAGGTCTCACTGGAGCGTGACCGTGCTTGGGAGTCTGAGCTCGAGGCTGTGAAGAAGCAGCAGTCAGTGGATTCAGCTGCTCTGAGCTCAGCCTTGTCTGAAATTCAGAGGTTGAAGCAGCAGCTGGGGGCCACCACAGAGTCTGATGCAGCTCGTGCCAAGCAATGCGAGTTTGCGGAGTCTGAGCTCGAGGGCTTGAAGCAGGAGATGGAGCTCCGGCTTGCGACCATCGAGGGCCTGAAGGTAAACGTTGGCGAGAGCGACAAGGCTGTAGCTGAGGCGAACGCGGTGGCAGCTGAGACCAAGAAGCAGCTTGAGATGGCACAAGCTACTATTGACTCGCTGCTTGCTGAGGGTGCCCGGTTGCAAGAATGCCTGAGGTCGAAGGACGCAGAGCTCGGCCAGTCCATGGCTCGATTAGCCACACTGGAGGAAGATCTGAAGAAGGCACATAACAAGGATGATGTTGATGGCAGCTTTGGCAGCCCTGATCATGGTGAAGCTGTGGAGAAGGTGGTGGTAACTATCCCCAATGGCAATGGCAGCTGTGGTGGTTCTGGCGCAGAGATTGAGCAGCTGCGGACGGCGCTCGAGGTGGCTGAGATTAGGTACCAGGAAGAACAAACTCGCACGACGATCGAGACGAAGACCGCCTACGAAATGCTGGAGAATGCCAAGTCAGAGTACGACCGCAGAGTGCGCGATCTTGAGCTGGAGCTGAAGAGCAAGAACGATGAGCTCACTGAAGCGAAGGCCACTTTGGCTGTCAGGTGTGACGGGAAGAGCGATGTGATGCAGCCAGAGCTTGAGGCGAAGCTGATGAAGTCGATCACCGATGCGACGGAGCTGAAGGCGAGCCTGATGGACAAGGAGACGGCGCTGCAGAGCGTGATGGAGGAGAACGAGACGCTCAAGTCGGAGGCGGGGAAGAAGGCGGCGGAGGTGCAGCGGAGGTACGAGGCGGCGGTGGCGGAGCTGGAGCTGGCCAAGGCGGCGGAGCAGGACGTCCGGATGCGGCTCGGGTACGTGACGGAGGAGGCCGACAAGAGCAGCCGGCGCGCCGCCAGGGCGTCGGAGCAGCTGGACGCGGCGCAGGCGGCCAGCGTCGAGATGGAGGCCGAGCTGCGGCGCCTCCGGGTGCAGTCTGACCAGTGGCGCAAGGCGGCCGAGGCAGCGGCGGCGGCGCTGGGAGGAGGCGGTGGCGGCATTGGCAGGAACGTGGAGCGGACGGGGTCTCTGGAGCCGGCGGAGTACACCAACTCCATGATCGGCGGGAAGCTGGCGAGCTCGCCGTTCTCCGACGAGCCGGAGGAGGAGTCGCCGAAGCGGCGCAACAGCGGCGTGCTCCGGCGGATGAGCGGGCTGTGGAAGAAGAGCCCCAAGTGACCATCGACGCCATGGACAGCTTGGTGTGGTGTGTGTACTAGAAAGAACTGAAACTGACTAGCTAGGCTGAGCTGATCTGATCACGCCATGGATGGGTTTAGCTGCAAACACTGTGAATCAAAGCTAGTTAAGTTAATTACTACTGGTTGGTTAGTTGGTTTTGCTGCTGTGGTCGCAGTAAAAAAAGAATGTTAAGAACTCTTGTAATGATGTTGGAGATGAGGAGCATCTACATTTTGGGCTG     ]
[+] EMBL AK063920             [                                                           GCAGCTGCAGCAAGGCAGTAGGAGAGGAGTTGGAGGGAGGAGAGGGAGCTCCAAGAATCACCAGAGAGCGAGCAAGAGAGAGGTGAGAAGTAAGGTGAGCTCAGAAGGATTTGGTAAGGGATCTCATTATGCAGACTTCAAAAACCAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTCTCCGGCAACACCACGGTCATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGCAGGGATCACACCAACAAGAACCACTCCAGAGAAGAGCCCTAAGGTCACCGAGCGTCGGTCACCACGAAGCCCAATTACTG   AGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGTCAGCCAGCTGCAAGATGAGCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACGAAGACGCCACACACAACAGGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTCAAAGCTCGAGGACCTACAGCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACTCCAGGAACTGCGGAAGGTCTCACAGGAGCGTGACCGTGCTTGGGAGTCTGAGCTCGAGGCTGTGAAGAAGCAGCAGTCAGTGGATTCAGCTGCTCTGAGCTCAGCCTTGTCTGAAATTCAGAGGTTGAAGCAGCAGCTGGGGGCCACCACAGAGTCTGATGCAGCTCGTGCCAAGCAATGCGAGTTTGCGGAGTCTGAGCTCGAGGGCTTGAAGCAGGAGATGGAGCTCCGGCTTGCGACCATCGAGGGCCTGAAGGTAAACGTTGGCGAGAGCGACAAGGCTGTAGCTGAGGCGAACGCGGTGGCAGCTGAGACCAAGAAGCAGCTTGAGATGGCACAAGCTACTATTGACTCGCTGCTTGCTGAGGGTGCCCGGTTGCAAGAATGCCTGAGGTCGAAGGACGCAGAGCTCGGCCAGTCCATGGCTCGATTAGCCACACTGGAGGAAGATCTGAAGAAGGCACATAACAAGGATGATGTTGATGGCAGCTTTGGCAGCCCTGATCATGGTGAAGCTGTGGAGAAGGTGGTGGTAACTATCCCCAATGGCAATGGCAGCTGTGGTGGTTCTGGCGCAGAGATTGAGCAGCTGCGGACGGCGCTCGAGGTGGCTGAGATTAGGTACCAGGAAGAACAAACTCGCACGACGATCGAGACGAAGACCGCCTACGAAATGCTGGAGAATGCCAAGTCAGAGTACGACCGCAGAGTGCGCGATCTTGAGCTGGAGCTGAAGAGCAAGAACGATGAGCTCACTGAAGCGAAGGCCACTTTGGCTGTCAGGTGTGACGGGAAGAGCGATGTGATGCAGCCAGAGCTTGAGGCGAAGCTGATGAAGTCGATCACCGATGCGACGGAGCTGAAGGCGAGCCTGATGGACAAGGAGACGGCGCTGCAGAGCGTGATGGAGGAGAACGAGACGCTCAAGTCGGAGGCGGGGAAGAAGGCGGCGGAGGTGCAGCGGAGGTACGAGGCGGCGGTGGCGGAGCTGGAGCTGGCCAAGGCGGCGGAGCAGGACGTCCGGATGCGGCTCGGGTACGTGACGGAGGAGGCCAACAAGAGCAGCCGGCGCGCCGCCAGGGCGTCGGAGCAGCTGGACGCGGCGCAGGCGGCCAGCGTCGAGATGGAGGCCGAGCTGCGGCGCCTCCGGGTGCAGTCTGACCAGTGGCGCAAGGCGGCCGAGGCAGCGGCGGCGGCGCTGGGAGGAGGCGGTGGCGGCATTGGCAGGAACGTGGAGCGGACGGGGTCTCTGGAGCCGGCGGAGTACACCAACTCCATGATCGGCGGGAAGCTGGCGAGCTCGCCGTTCTCCGACGAGCCGGAGGAGGAGTCGCCGAAGCGGCGCAACAGCGGCGTGCTCCGGCGGATGAGCGGGCTGTGGAAGAAGAGCCCCAAGTGACCATCGACGCCATGGACAGCTTGGTGTGGTGTGTGTACTAGAAAGAACTGAAACTGACTAGCTAGGCTGAGCTGATCTGATCACGCCATGGATGGGTTTAGCTGCAAACACTGTGAATCAAAGCTAGTTAAGTTAATTACTACTGGTTGGTTAGTTGGTTTTGCTGCTGTGGTCGCAGTAAAAAAAGAATGTTAAGAACTCTTGTAATGATGTTGGAGATGAGGAGCATCTACATTTTGGGCTGCATGC]




>consensus_7040#0
GCTAGCTCGTCCACTCTCCTCTACTAGCAGCAGCAGTAGAAGACAACACACACGCAGCAG
CAGCTGCAGCAAGGCAGTAGGAGAGGAGTTGGAGGGAGGAGAGGGAGCTCCAAGAATCAC
CAGAGAGCGAGCAAGAGAGAGGTGAGAAGTAAGGTGAGCTCAGAAGGATTTGGTAAGGGA
TCTCATTATGCAGACTTCAAAAACCAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTC
TCCGGCAACACCACGGTCATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGC
AGGGATCACACCAACAAGAACCACTCCAGAGAGGAGCCCTAAGGTCACCGAGCGTCGGTC
ACCACGAAGCCCAATTACTGAGAAGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGT
CAGCCAGCTGCAAGATGAGCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACG
AAGACGCCACACACAACAGGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTC
AAAGCTCGAGGACCTACAGCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACT
CCAGGAACTGCGGAAGGTCTCACTGGAGCGTGACCGTGCTTGGGAGTCTGAGCTCGAGGC
TGTGAAGAAGCAGCAGTCAGTGGATTCAGCTGCTCTGAGCTCAGCCTTGTCTGAAATTCA
GAGGTTGAAGCAGCAGCTGGGGGCCACCACAGAGTCTGATGCAGCTCGTGCCAAGCAATG
CGAGTTTGCGGAGTCTGAGCTCGAGGGCTTGAAGCAGGAGATGGAGCTCCGGCTTGCGAC
CATCGAGGGCCTGAAGGTAAACGTTGGCGAGAGCGACAAGGCTGTAGCTGAGGCGAACGC
GGTGGCAGCTGAGACCAAGAAGCAGCTTGAGATGGCACAAGCTACTATTGACTCGCTGCT
TGCTGAGGGTGCCCGGTTGCAAGAATGCCTGAGGTCGAAGGACGCAGAGCTCGGCCAGTC
CATGGCTCGATTAGCCACACTGGAGGAAGATCTGAAGAAGGCACATAACAAGGATGATGT
TGATGGCAGCTTTGGCAGCCCTGATCATGGTGAAGCTGTGGAGAAGGTGGTGGTAACTAT
CCCCAATGGCAATGGCAGCTGTGGTGGTTCTGGCGCAGAGATTGAGCAGCTGCGGACGGC
GCTCGAGGTGGCTGAGATTAGGTACCAGGAAGAACAAACTCGCACGACGATCGAGACGAA
GACCGCCTACGAAATGCTGGAGAATGCCAAGTCAGAGTACGACCGCAGAGTGCGCGATCT
TGAGCTGGAGCTGAAGAGCAAGAACGATGAGCTCACTGAAGCGAAGGCCACTTTGGCTGT
CAGGTGTGACGGGAAGAGCGATGTGATGCAGCCAGAGCTTGAGGCGAAGCTGATGAAGTC
GATCACCGATGCGACGGAGCTGAAGGCGAGCCTGATGGACAAGGAGACGGCGCTGCAGAG
CGTGATGGAGGAGAACGAGACGCTCAAGTCGGAGGCGGGGAAGAAGGCGGCGGAGGTGCA
GCGGAGGTACGAGGCGGCGGTGGCGGAGCTGGAGCTGGCCAAGGCGGCGGAGCAGGACGT
CCGGATGCGGCTCGGGTACGTGACGGAGGAGGCCGACAAGAGCAGCCGGCGCGCCGCCAG
GGCGTCGGAGCAGCTGGACGCGGCGCAGGCGGCCAGCGTCGAGATGGAGGCCGAGCTGCG
GCGCCTCCGGGTGCAGTCTGACCAGTGGCGCAAGGCGGCCGAGGCAGCGGCGGCGGCGCT
GGGAGGAGGCGGTGGCGGCATTGGCAGGAACGTGGAGCGGACGGGGTCTCTGGAGCCGGC
GGAGTACACCAACTCCATGATCGGCGGGAAGCTGGCGAGCTCGCCGTTCTCCGACGAGCC
GGAGGAGGAGTCGCCGAAGCGGCGCAACAGCGGCGTGCTCCGGCGGATGAGCGGGCTGTG
GAAGAAGAGCCCCAAGTGACCATCGACGCCATGGACAGCTTGGTGTGGTGTGTGTACTAG
AAAGAACTGAAACTGACTAGCTAGGCTGAGCTGATCTGATCACGCCATGGATGGGTTTAG
CTGCAAACACTGTGAATCAAAGCTAGTTAAGTTAATTACTACTGGTTGGTTAGTTGGTTT
TGCTGCTGTGGTCGCAGTAAAAAAAGAATGTTAAGAACTCTTGTAATGATGTTGGAGATG
AGGAGCATCTACATTTTGGGCTGCATGC

consensusID : consensus_7040#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1561
fasta sequence 
                              [AGGAGAGGAGTTGGAGGGAGGAGAGGGAGCTCCAAGAATCACCAGAGAGCGAGCAAGAGAGAGGTGAGAAGTAAGGTGAGCTCAGAAGGATTTGGTAAGGGATCTCATTATGCAGACTTCAAAAACCAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTCTCCGGCAACACCACGGTCATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGCAGGGATCACACCAACAAGAACCACTCCAGAGAGGAGCCCTAAGGTCACCGAGCGTCGGTCACCACGAAGCCCAATTACTGAGAAGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGTCAGCCAGCTGCAAGATGAGCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACGAAGACGCCACACACAACAGGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTCAAAGCTCGAGGACCTACAGCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACTCCAGGAA-CTGCGGAAGGTCTCACAGGAGCGTGACCGTGC-TTGGGAGTCTGAGCTCGAGGCTGTGAAGAAGCAGCAGTCAGTGGATTCAGCTGCTCTGAGCTCAGCCTTGTCTGAAATTCAGAGGTTGAAGCAGCAGCTGGGGGCCACCACAGAGTCTGATGCAGCTCGTGCCAAGCAATGCGAGTTTGCGGAGTCTGAGCTCGAGGGCTTGAAGCAGGAGATGGAGCTCCGGCTTGCGACCATCGAGGGCCTGAAGGTAAACGTTGGCGAGAGCGACAAGGCTGTAGCTGAGGCGAACGCGGTGGCAGCTGAGACCAAGAAGCAGCTTGAGATGGCACAAGCTACTATTGACTCGCTGCTTGCTGAGGGTGCCCGGTTGCAAGAATGCCTGAGGTCGAAGGACGCAGAGCTCGGCCAGTCCATGGCTCGATTAGCCACACTGGAGGAAGATCTGAAGAAGGCACATAACAAGGATGATGTTGATGGCAGCTTTGGCAGCCCTGATCATGGTGAAGCTGTGGAGAAGGTGGTGGTAACTATCCCCAATGGCAATGGCAGCTGTGGTGGTTCTGGCGCAGAGATTGAGCAGCTGCGGACGGCGCTCGAGGTGGCTGAGATTAGGTACCAGGAAGAACAAACTCGCACGACGATCGAGACGAAGACCGCCTACGAAATGCTGGAGAATGCCAAGTCAGAGTACGACAAGAGCAGCCGGCGCGCCGCCAGGGCGTCGGAGCAGCTGGACGCGGCGCAGGCGGCCAGCGTCGAGATGGAGGCCGAGCTGCGGCGCCTCCGGGTGCAGTCTGACCAGTGGCGCAAGGCGCCGCCGCCCTCTTCTTCTTCTCCTTCACCACGGTTGTTGGTTTCTTGGCTTTTCTCCTCCCTTTTCTTGGGAAAAGAGAAGACAGATAACTCGATCTTGTGATTAATTTAGCCGCAATTGACCAATTTTTTTTGGCAATTGGCTGTGTTCTTCTCTCTTTCCAAAAATTTTGTCGATTGGGAGGAAAGAAAAGAAATTGATAGGGAAAAAACAAAA]

[+] EMBL AK072968             [AGGAGAGGAGTTGGAGGGAGGAGAGGGAGCTCCAAGAATCACCAGAGAGCGAGCAAGAGAGAGGTGAGAAGTAAGGTGAGCTCAGAAGGATTTGGTAAGGGATCTCATTATGCAGACTTCAAAAACCAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTCTCCGGCAACACCACGGTCATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGCAGGGATCACACCAACAAGAACCACTCCAGAGAGGAGCCCTAAGGTCACCGAGCGTCGGTCACCACGAAGCCCAATTACTGAGAAGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGTCAGCCAGCTGCAAGATGAGCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACGAAGACGCCACACACAACAGGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTCAAAGCTCGAGGACCTACAGCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACTCCAGGAA CTGCGGAAGGTCTCACAGGAGCGTGACCGTGC TTGGGAGTCTGAGCTCGAGGCTGTGAAGAAGCAGCAGTCAGTGGATTCAGCTGCTCTGAGCTCAGCCTTGTCTGAAATTCAGAGGTTGAAGCAGCAGCTGGGGGCCACCACAGAGTCTGATGCAGCTCGTGCCAAGCAATGCGAGTTTGCGGAGTCTGAGCTCGAGGGCTTGAAGCAGGAGATGGAGCTCCGGCTTGCGACCATCGAGGGCCTGAAGGTAAACGTTGGCGAGAGCGACAAGGCTGTAGCTGAGGCGAACGCGGTGGCAGCTGAGACCAAGAAGCAGCTTGAGATGGCACAAGCTACTATTGACTCGCTGCTTGCTGAGGGTGCCCGGTTGCAAGAATGCCTGAGGTCGAAGGACGCAGAGCTCGGCCAGTCCATGGCTCGATTAGCCACACTGGAGGAAGATCTGAAGAAGGCACATAACAAGGATGATGTTGATGGCAGCTTTGGCAGCCCTGATCATGGTGAAGCTGTGGAGAAGGTGGTGGTAACTATCCCCAATGGCAATGGCAGCTGTGGTGGTTCTGGCGCAGAGATTGAGCAGCTGCGGACGGCGCTCGAGGTGGCTGAGATTAGGTACCAGGAAGAACAAACTCGCACGACGATCGAGACGAAGACCGCCTACGAAATGCTGGAGAATGCCAAGTCAGAGTACGACAAGAGCAGCCGGCGCGCCGCCAGGGCGTCGGAGCAGCTGGACGCGGCGCAGGCGGCCAGCGTCGAGATGGAGGCCGAGCTGCGGCGCCTCCGGGTGCAGTCTGACCAGTGGCGCAAGGCGCCGCCGCCCTCTTCTTCTTCTCCTTCACCACGGTTGTTGGTTTCTTGGCTTTTCTCCTCCCTTTTCTTGGGAAAAGAGAAGACAGATAACTCGATCTTGTGATTAATTTAGCCGCAATTGACCAATTTTTTTTGGCAATTGGCTGTGTTCTTCTCTCTTTCCAAAAATTTTGTCGATTGGGAGGAAAGAAAAGAAATTGATAGGGAAAAAACAAAA]
[+] EMBL CB640780             [                  AGGAGAGGGAGCTCCAAGAATCACCAGAGAGCGAGCAAGAGA     GAGAAGTAAGGTGAGCTCAGAAGGATTTGGTAAGGGATCTCATTATGCAGACTTCAAAAACCAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTCTCCGGCAACACCACGGTCATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGCAGGGATCACACCAACAAGAACCACTCCAGAGAGGAGCCCTAAGGTCACCGAGCGTCGGTCACCACGAAGCCCAATTACTGAGAAGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGTCAGCCAGCTGCAAGATGAGCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACGAAGACGCCACACACAACAGGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTCAAAGCTCGAGGACCTACAGCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACTCCAGGAACCTGCGGAAGGTCTCACAGGAGCGTGACCGTGCTTTGGGAGTCTGAGCTCGAGGCTGTGAAGAAGCAGCAGTCAGTGGATTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]




>consensus_7040#1
AGGAGAGGAGTTGGAGGGAGGAGAGGGAGCTCCAAGAATCACCAGAGAGCGAGCAAGAGA
GAGGTGAGAAGTAAGGTGAGCTCAGAAGGATTTGGTAAGGGATCTCATTATGCAGACTTC
AAAAACCAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTCTCCGGCAACACCACGGTC
ATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGCAGGGATCACACCAACAAG
AACCACTCCAGAGAGGAGCCCTAAGGTCACCGAGCGTCGGTCACCACGAAGCCCAATTAC
TGAGAAGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGTCAGCCAGCTGCAAGATGA
GCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACGAAGACGCCACACACAACA
GGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTCAAAGCTCGAGGACCTACA
GCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACTCCAGGAACTGCGGAAGGT
CTCACAGGAGCGTGACCGTGCTTGGGAGTCTGAGCTCGAGGCTGTGAAGAAGCAGCAGTC
AGTGGATTCAGCTGCTCTGAGCTCAGCCTTGTCTGAAATTCAGAGGTTGAAGCAGCAGCT
GGGGGCCACCACAGAGTCTGATGCAGCTCGTGCCAAGCAATGCGAGTTTGCGGAGTCTGA
GCTCGAGGGCTTGAAGCAGGAGATGGAGCTCCGGCTTGCGACCATCGAGGGCCTGAAGGT
AAACGTTGGCGAGAGCGACAAGGCTGTAGCTGAGGCGAACGCGGTGGCAGCTGAGACCAA
GAAGCAGCTTGAGATGGCACAAGCTACTATTGACTCGCTGCTTGCTGAGGGTGCCCGGTT
GCAAGAATGCCTGAGGTCGAAGGACGCAGAGCTCGGCCAGTCCATGGCTCGATTAGCCAC
ACTGGAGGAAGATCTGAAGAAGGCACATAACAAGGATGATGTTGATGGCAGCTTTGGCAG
CCCTGATCATGGTGAAGCTGTGGAGAAGGTGGTGGTAACTATCCCCAATGGCAATGGCAG
CTGTGGTGGTTCTGGCGCAGAGATTGAGCAGCTGCGGACGGCGCTCGAGGTGGCTGAGAT
TAGGTACCAGGAAGAACAAACTCGCACGACGATCGAGACGAAGACCGCCTACGAAATGCT
GGAGAATGCCAAGTCAGAGTACGACAAGAGCAGCCGGCGCGCCGCCAGGGCGTCGGAGCA
GCTGGACGCGGCGCAGGCGGCCAGCGTCGAGATGGAGGCCGAGCTGCGGCGCCTCCGGGT
GCAGTCTGACCAGTGGCGCAAGGCGCCGCCGCCCTCTTCTTCTTCTCCTTCACCACGGTT
GTTGGTTTCTTGGCTTTTCTCCTCCCTTTTCTTGGGAAAAGAGAAGACAGATAACTCGAT
CTTGTGATTAATTTAGCCGCAATTGACCAATTTTTTTTGGCAATTGGCTGTGTTCTTCTC
TCTTTCCAAAAATTTTGTCGATTGGGAGGAAAGAAAAGAAATTGATAGGGAAAAAACAAA
A

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7040#0      GCTAGCTCGTCCACTCTCCTCTACTAGCAGCAGCAGTAGAAGACAACACACACGCAGCAG 60
consensus_7040#1      ------------------------------------------------------------
                                                                                  

consensus_7040#0      CAGCTGCAGCAAGGCAGTAGGAGAGGAGTTGGAGGGAGGAGAGGGAGCTCCAAGAATCAC 120
consensus_7040#1      ------------------AGGAGAGGAGTTGGAGGGAGGAGAGGGAGCTCCAAGAATCAC 42
                                        ******************************************

consensus_7040#0      CAGAGAGCGAGCAAGAGAGAGGTGAGAAGTAAGGTGAGCTCAGAAGGATTTGGTAAGGGA 180
consensus_7040#1      CAGAGAGCGAGCAAGAGAGAGGTGAGAAGTAAGGTGAGCTCAGAAGGATTTGGTAAGGGA 102
                      ************************************************************

consensus_7040#0      TCTCATTATGCAGACTTCAAAAACCAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTC 240
consensus_7040#1      TCTCATTATGCAGACTTCAAAAACCAGGAATGGGCCTTCAGATGCCCCACAGAAGGCTTC 162
                      ************************************************************

consensus_7040#0      TCCGGCAACACCACGGTCATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGC 300
consensus_7040#1      TCCGGCAACACCACGGTCATCTCGGGTGGCGAAAACTGGAGGGAATGAAACTGACTCTGC 222
                      ************************************************************

consensus_7040#0      AGGGATCACACCAACAAGAACCACTCCAGAGAGGAGCCCTAAGGTCACCGAGCGTCGGTC 360
consensus_7040#1      AGGGATCACACCAACAAGAACCACTCCAGAGAGGAGCCCTAAGGTCACCGAGCGTCGGTC 282
                      ************************************************************

consensus_7040#0      ACCACGAAGCCCAATTACTGAGAAGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGT 420
consensus_7040#1      ACCACGAAGCCCAATTACTGAGAAGCGCCCAAGTAGGCTGTCCGAGTTGGAGTCCAGGGT 342
                      ************************************************************

consensus_7040#0      CAGCCAGCTGCAAGATGAGCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACG 480
consensus_7040#1      CAGCCAGCTGCAAGATGAGCTGAAGAAGGCCAAGGAGCAGCTGAGCTTATCGGAGTCACG 402
                      ************************************************************

consensus_7040#0      AAGACGCCACACACAACAGGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTC 540
consensus_7040#1      AAGACGCCACACACAACAGGAAGCAGAGGAAGCAAAAAAGCAGGAGCAGGCTGCAACCTC 462
                      ************************************************************

consensus_7040#0      AAAGCTCGAGGACCTACAGCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACT 600
consensus_7040#1      AAAGCTCGAGGACCTACAGCGCCAGCTTGCCGAGTTCTCAGCTGCGGAGGAGTCCCGACT 522
                      ************************************************************

consensus_7040#0      CCAGGAACTGCGGAAGGTCTCACTGGAGCGTGACCGTGCTTGGGAGTCTGAGCTCGAGGC 660
consensus_7040#1      CCAGGAACTGCGGAAGGTCTCACAGGAGCGTGACCGTGCTTGGGAGTCTGAGCTCGAGGC 582
                      *********************** ************************************

consensus_7040#0      TGTGAAGAAGCAGCAGTCAGTGGATTCAGCTGCTCTGAGCTCAGCCTTGTCTGAAATTCA 720
consensus_7040#1      TGTGAAGAAGCAGCAGTCAGTGGATTCAGCTGCTCTGAGCTCAGCCTTGTCTGAAATTCA 642
                      ************************************************************

consensus_7040#0      GAGGTTGAAGCAGCAGCTGGGGGCCACCACAGAGTCTGATGCAGCTCGTGCCAAGCAATG 780
consensus_7040#1      GAGGTTGAAGCAGCAGCTGGGGGCCACCACAGAGTCTGATGCAGCTCGTGCCAAGCAATG 702
                      ************************************************************

consensus_7040#0      CGAGTTTGCGGAGTCTGAGCTCGAGGGCTTGAAGCAGGAGATGGAGCTCCGGCTTGCGAC 840
consensus_7040#1      CGAGTTTGCGGAGTCTGAGCTCGAGGGCTTGAAGCAGGAGATGGAGCTCCGGCTTGCGAC 762
                      ************************************************************

consensus_7040#0      CATCGAGGGCCTGAAGGTAAACGTTGGCGAGAGCGACAAGGCTGTAGCTGAGGCGAACGC 900
consensus_7040#1      CATCGAGGGCCTGAAGGTAAACGTTGGCGAGAGCGACAAGGCTGTAGCTGAGGCGAACGC 822
                      ************************************************************

consensus_7040#0      GGTGGCAGCTGAGACCAAGAAGCAGCTTGAGATGGCACAAGCTACTATTGACTCGCTGCT 960
consensus_7040#1      GGTGGCAGCTGAGACCAAGAAGCAGCTTGAGATGGCACAAGCTACTATTGACTCGCTGCT 882
                      ************************************************************

consensus_7040#0      TGCTGAGGGTGCCCGGTTGCAAGAATGCCTGAGGTCGAAGGACGCAGAGCTCGGCCAGTC 1020
consensus_7040#1      TGCTGAGGGTGCCCGGTTGCAAGAATGCCTGAGGTCGAAGGACGCAGAGCTCGGCCAGTC 942
                      ************************************************************

consensus_7040#0      CATGGCTCGATTAGCCACACTGGAGGAAGATCTGAAGAAGGCACATAACAAGGATGATGT 1080
consensus_7040#1      CATGGCTCGATTAGCCACACTGGAGGAAGATCTGAAGAAGGCACATAACAAGGATGATGT 1002
                      ************************************************************

consensus_7040#0      TGATGGCAGCTTTGGCAGCCCTGATCATGGTGAAGCTGTGGAGAAGGTGGTGGTAACTAT 1140
consensus_7040#1      TGATGGCAGCTTTGGCAGCCCTGATCATGGTGAAGCTGTGGAGAAGGTGGTGGTAACTAT 1062
                      ************************************************************

consensus_7040#0      CCCCAATGGCAATGGCAGCTGTGGTGGTTCTGGCGCAGAGATTGAGCAGCTGCGGACGGC 1200
consensus_7040#1      CCCCAATGGCAATGGCAGCTGTGGTGGTTCTGGCGCAGAGATTGAGCAGCTGCGGACGGC 1122
                      ************************************************************

consensus_7040#0      GCTCGAGGTGGCTGAGATTAGGTACCAGGAAGAACAAACTCGCACGACGATCGAGACGAA 1260
consensus_7040#1      GCTCGAGGTGGCTGAGATTAGGTACCAGGAAGAACAAACTCGCACGACGATCGAGACGAA 1182
                      ************************************************************

consensus_7040#0      GACCGCCTACGAAATGCTGGAGAATGCCAAGTCAGAGTACGACCGCAGAGTGCGCGATCT 1320
consensus_7040#1      GACCGCCTACGAAATGCTGGAGAATGCCAAGTCAGAGTACGAC--AAGAGCAGCCGGCGC 1240
                      *******************************************   ****    **    

consensus_7040#0      TGAGCTGGAGCTGAAGAGCAAGAACGATGAGCTCACTGAAGCGAAGGCCACTTTGGCTGT 1380
consensus_7040#1      GCCGCCAGGGCGTCGGAGCA----------GCTGGACGCGGCGCAGGCGGC--CAGCGTC 1288
                         **  * **    *****          ***    *  *** ****  *    **   

consensus_7040#0      CAGGTGTGACGGGAAGAGCGATGTGATGCAGCCAGAGCTTGAGGCGAAGCTGATGAAGTC 1440
consensus_7040#1      GAGATGGAGGCCGAGCTGCGGCGCC-TCCGGGTGCAGTCTGACCAGTGGCGCAAGGCGCC 1347
                       ** **      **   ***  *   * * *    **  ***   *  **  * *  * *

consensus_7040#0      GATCACCGATGCGACGGAGCTGAAGGCGAGCCTGATGGACAAGGAGACGGCGCTGCAGAG 1500
consensus_7040#1      GCCGCCCTCTTCTTCTTCTCCTTCACCACGGTTGTTGGTTTCTTGGCTTTTCTCCTCCCT 1407
                      *    **  * *  *    *      *  *  ** ***       *              

consensus_7040#0      CGTGATGGAGGAGAACGAGACGCTCAAGTCGGAGGCGGGGAAGAAGGCGGCGGAGGTGCA 1560
consensus_7040#1      TTTCTTGGGAAAAGAGAAGACAGATAACTCG-ATCTTGTGATTAATTTAGCCGCAATTGA 1466
                        *  ***   *  *  ****    ** *** *    * **  **    ** *   *  *

consensus_7040#0      GCGGAGGTACGAGGCGGC-GGTGGCGGAGCTGGAGCTGGCCAAGGCGGCGGAGCAGGACG 1619
consensus_7040#1      CCAATTTTTTTTGGCAATTGGCTGTGTTCTTCTCTCTTTCCAAAA-----ATTTTGTCGA 1521
                       *     *    ***    **  * *    *    **  ****            *    

consensus_7040#0      TCCGGATGCGGCTCGGGTACGTGACGGAGGAGGCCGACAAGAGCAGCCGGCGCGCCGCCA 1679
consensus_7040#1      TTGGGAGGAAAGAAAAGAAATTGATAGGGAAAA--AACAAAA------------------ 1561
                      *  *** *        * *  ***  * * *     **** *                  

consensus_7040#0      GGGCGTCGGAGCAGCTGGACGCGGCGCAGGCGGCCAGCGTCGAGATGGAGGCCGAGCTGC 1739
consensus_7040#1      ------------------------------------------------------------
                                                                                  

consensus_7040#0      GGCGCCTCCGGGTGCAGTCTGACCAGTGGCGCAAGGCGGCCGAGGCAGCGGCGGCGGCGC 1799
consensus_7040#1      ------------------------------------------------------------
                                                                                  

consensus_7040#0      TGGGAGGAGGCGGTGGCGGCATTGGCAGGAACGTGGAGCGGACGGGGTCTCTGGAGCCGG 1859
consensus_7040#1      ------------------------------------------------------------
                                                                                  

consensus_7040#0      CGGAGTACACCAACTCCATGATCGGCGGGAAGCTGGCGAGCTCGCCGTTCTCCGACGAGC 1919
consensus_7040#1      ------------------------------------------------------------
                                                                                  

consensus_7040#0      CGGAGGAGGAGTCGCCGAAGCGGCGCAACAGCGGCGTGCTCCGGCGGATGAGCGGGCTGT 1979
consensus_7040#1      ------------------------------------------------------------
                                                                                  

consensus_7040#0      GGAAGAAGAGCCCCAAGTGACCATCGACGCCATGGACAGCTTGGTGTGGTGTGTGTACTA 2039
consensus_7040#1      ------------------------------------------------------------
                                                                                  

consensus_7040#0      GAAAGAACTGAAACTGACTAGCTAGGCTGAGCTGATCTGATCACGCCATGGATGGGTTTA 2099
consensus_7040#1      ------------------------------------------------------------
                                                                                  

consensus_7040#0      GCTGCAAACACTGTGAATCAAAGCTAGTTAAGTTAATTACTACTGGTTGGTTAGTTGGTT 2159
consensus_7040#1      ------------------------------------------------------------
                                                                                  

consensus_7040#0      TTGCTGCTGTGGTCGCAGTAAAAAAAGAATGTTAAGAACTCTTGTAATGATGTTGGAGAT 2219
consensus_7040#1      ------------------------------------------------------------
                                                                                  

consensus_7040#0      GAGGAGCATCTACATTTTGGGCTGCATGC 2248
consensus_7040#1      -----------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)