cluster # 7055

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7055 cluster # 7055 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7055#0 length = 1473 sequences # 4
consensusID : consensus_7055#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1473
fasta sequence
                              [TATCATCCAGTTGCACACCGAAAATGGCGGCGGCGGCGGAGAGCAAGGCGGGGAAATCG-CCGGAGGAGC-TCCTCTGCGCGGCGGCGGAGT-CCGGTGACGCGGAGGCCATCACCGGGCT-CCTCGCCGAAGGCGCCGACCCGACCCACTTCGATGCCTCCGGGTTGACCCCGCTGATGCACGCGGCCACCGGTGGCCACGCCGCCGTCGTGCAGCTTCTCCTCGACGCCGGCGCGCCATGGAACGCGCTCTCCCCCACGGGGATCTCCGCGGGAGACCTCGCCTCCGATTCCGCCACCTTCGACCTCCTCCTCGACCACGCCCTCCGCTCCGAGCTCGTCCTCGGCACCGTCGCTCGCCGCCAAGCGGGGCCCGCGGACTCCCCCGCCGAGAGCTACCTCGAATCCAGGGTTTCATTCAGCGAGGAGAGGGTGATGGACGCGGATAGCAAGGCCGTGATGATGGAGTGGGAGCGGCCGCTGATGGAGGCGCACGCGCGGGCGGTGTGCTCCGGCGGCAAGGTGCTCAACGTGGGATTCGGGATGGGGCTCGTGGACACGGCGATCCAGAGGTACGAGCCCGAGGAGCACACCATCGTCGAGGCCCACCCGGAGGTGTACGCCCGGATGCTCAAGCTCGGCTGGGGCGAGAAGAAGAATGTCAAGGTCGTGTTCGGACGGTGGCAGGACGTGCTCCCGCAGCTCGGCTCTTATGATGGTATATTCTTCGACACCTATGGAGAATACTACGAGGATATGAGAGAGTTCCACCAACATCTTCCTAAGCTATTGAAGCCTGGAGGGATCTACTCGTATTTCAATGGCCTCTGTGGCGATAATGCCTTCTTCCACGTTGTGTATTGCCAGCTCGTAGCGTTAGAGTTGGCAAATCTTGGCTACTCGACACAGTTCATCCCGCTCCCAGTCAAAGATTGTCTTTCAGAGGAAATATGGAATGGGGTGAAGCAGAAATACTGGCAATTGGATACTTACCACCTCCCAGTTTGCCAAGCAGAATCAGAACCGGAGCAATAATCCAATGGATTGTCAGCAAATTGTGCTAAGCGTCAATGGCCAGCAAATTGTGCTAAGCGTCAATGGCTGGCTGCTTTGGCTGCTGCTACGTTTGTTCAAGCGTGTTTCTGAATTCCATACACCATCTCCGGAGCTGGAACTTCCATCGGGCATGTGACGTTTCCACTGCAATCGACTACTAATCTACTCCTGTAGATGCTTATCGGCTGTGGCCTGTAGCCAATGAAAGAGAACTTTCACCGAAACTTTGTTTTCTTGGCAGTGATGTTACAATTTTGTTAGGTCTGCGAATGCTGCTGTTTTTTTTTCTTTTTTTCGTTCCAAGCCGCCCGTGTCGTTGTTCTGGAAAGGCGGGAACAACACCTAGCTTTCCCAGTTTTTTTTCTCAATGTTCTGGACGCGGTTCTCTTCTTTTCTGCAGCAAACAAGGATAGTTCGAACT]

[+] EMBL AK101534             [TATCATCCAGTTGCACACCGAAAATGGCGGCGGCGGCGGAGAGCAAGGCGGGGAAATCG CCGGAGGAGC TCCTCTGCGCGGCGGCGGAGT CCGGTGACGCGGAGGCCATCACCGGGCT CCTCGCCGAAGGCGCCGACCCGACCCACTTCGATGCCTCCGGGTTGACCCCGCTGATGCACGCGGCCACCGGTGGCCACGCCGCCGTCGTGCAGCTTCTCCTCGACGCCGGCGCGCCATGGAACGCGCTCTCCCCCACGGGGATCTCCGCGGGAGACCTCGCCTCCGATTCCGCCACCTTCGACCTCCTCCTCGACCACGCCCTCCGCTCCGAGCTCGTCCTCGGCACCGTCGCTCGCCGCCAAGCGGGGCCCGCGGACTCCCCCGCCGAGAGCTACCTCGAATCCAGGGTTTCATTCAGCGAGGAGAGGGTGATGGACGCGGATAGCAAGGCCGTGATGATGGAGTGGGAGCGGCCGCTGATGGAGGCGCACGCGCGGGCGGTGTGCTCCGGCGGCAAGGTGCTCAACGTGGGATTCGGGATGGGGCTCGTGGACACGGCGATCCAGAGGTACGAGCCCGAGGAGCACACCATCGTCGAGGCCCACCCGGAGGTGTACGCCCGGATGCTCAAGCTCGGCTGGGGCGAGAAGAAGAATGTCAAGGTCGTGTTCGGACGGTGGCAGGACGTGCTCCCGCAGCTCGGCTCTTATGATGGTATATTCTTCGACACCTATGGAGAATACTACGAGGATATGAGAGAGTTCCACCAACATCTTCCTAAGCTATTGAAGCCTGGAGGGATCTACTCGTATTTCAATGGCCTCTGTGGCGATAATGCCTTCTTCCACGTTGTGTATTGCCAGCTCGTAGCGTTAGAGTTGGCAAATCTTGGCTACTCGACACAGTTCATCCCGCTCCCAGTCAAAGATTGTCTTTCAGAGGAAATATGGAATGGGGTGAAGCAGAAATACTGGCAATTGGATACTTACCACCTCCCAGTTTGCCAAGCAGAATCAGAACCGGAGCAATAATCCAATGGATTGTCAGCAAATTGTGCTAAGCGTCAATGGCCAGCAAATTGTGCTAAGCGTCAATGGCTGGCTGCTTTGGCTGCTGCTACGTTTGTTCAAGCGTGTTTCTGAATTCCATACACCATCTCCGGAGCTGGAACTTCCATCGGGCATGTGACGTTTCCACTGCAATCGACTACTAATCTACTCCTGTAGATGCTTATCGGCTGTGGCCTGTAGCCAATGAAAGAGAACTTTCACCGAAACTTTGTTTTCTTGGCAGTGATGTTACAATTTTGTTAGGTCTGCGAATGCTGCTGTTTTTTTTTCTTTTTTTCGTTCCAAGCCGCCCGTGTCGTTGTTCTGGAAAGGCGGGAACAACACCTAGCTTTCCCAGTTTTTTTTCTCAATGTTCTGGACGCGGTTCTCTTCTTTTCTGCAGCAAACAAGGATAGTTCGAACT]
[+] EMBL AK064205             [          TTGCACACCGAAAATGGCGGCGGCGGCGGAGAGCAAGGCGGGGAAATCG CCGGAGGAGC TCCTCTGCGCGGCGGCGGAGT CCGGT CCGCGGAGGCCATCACCGGGCT CCTCGCCGAAGGCGCCGACCCGACCCACTTCGATGCCTCCGGGTTGACCCCGCTGATGCACGCGGCCACCGGTGGCCACGCCGCCGTCGTGCAGCTTCTCCTCGACGCCGGCGCGCCATGGAACGCGCTCTCCCCCACGGGGATCTCCGCGGGAGACCTCGCCTCCGATTCCGCCACCTTCGACCTCCTCCTCGACCACGCCCTCCGCTCCGAGCTCGTCCTCGGCACCGTCGCTCGCCGCCAAGCGGGGCCCGCGGACTCCCCCGCCGAGAGCTACCTCGAATCCAGGGTTTCATTCAGCGAGGAGAGGGTGATGGACGCGGATAGCAAGGCCGTGATGATGGAGTGGGAGCGGCCGCTGATGGAGGCGCACGCGCGGGCGGTGTGCTCCGGCGGCAAGGTGCTCAACGTGGGATTCGGGATGGGGCTCGTGGACACGGCGATCCAGAGGTACGAGCCCGAGGAGCACACCATCGTCGAGGCCCACCCGGAGGTGTACGCCCGGATGCTCAAGCTCGGCTGGGGCGAGAAGAAGAATGTCAAGGTCGTGTTCGGACGGTGGCAGGACGTGCTCCCGCAGCTCGGCTCTTATGATGGTATATTCTTCGACACCTATGGAGAATACTACGAGG  ATGAGAGAGTTCCACCAACATCTTCCTAAGCTATTGAAGCCTGGAGGGATCTACTCGTATTTCAATGGCCTCTGTGGCGATAATGCCTTCTTCCACGTTGTGTATTGCCAGCTCGTAGCGTTAGAGTTGGCAAATCTTGGCTACTCGACACAGTTCATCCCGCTCCCAGTCAAAGATTGTCTTTCAGAGGAAATATGGAATGGGGTGAAGCAGAAATACTGGCAATTGGATACTTACCACCTCCCAGTTTGCCAAGCAGAATCAGAACCGGAGCAATAATCCAATGGATTGTCAGCAAATTGTGCTAAGCGTCAATGGCCAGCAAATTGTGCTAAGCGTCAATGGCTGGCTGCTTTGGCTGCTGCTACGTTTGTTCAAGCGTGTTTCTGAATTCCATACACCATCTCCGGAGCTGGAACTTCCATCGGGCATGTGACGTTTCCACTGCAATCGACTACTAATCTACTCCTGTAGATGCTTATCGGCTGTGGCCTGTAGCCAATGAAAGAGAACTTTCACCGAAACTTTGTTTTCTTGGCAGTGATGTTACAATTTTGTTAGGTCTGCGAATGCTGCTGTTTTTTTTTCTTTTTTTCGTTCCAAGCCGCCCGTGTCGTTGTTCTGGAAAGGCGGGAACAACACCTAGCTTTCCCAGTTTTTTTTCTCAATGTTCTGGACGCGGTTCTCTTCTTTTCTGCAGCAAACAAGGATAGTT      ]
[+] EMBL AU071075             [              ACACCGAAAATGGCGGCGGCGGCGGAGAGCAAGGCGGGGAAATCGCCCGGAGGAGCTTCCTCTGCGCGGCGGCGGAGTCCCGGTGACGCGGAGGCCATCACCGGGCTCCCTCGCCGAAGGCGCCGACCCGACCCACTTCGATGCCTCCGGGTTGACCCCGCTGATGCACGCGGCCACCGGTGGCCACGCCGCCGTCGTGCAGCTTCTCCTCGACGCCGGCGCGCCATGGAACGCGCTCTCCCCCACGGGGATCTCCGCGGGAGACCTCGCCTCCGATTCCGCCACCTTCGACCTCCTCCTCGACCACGCCCTCCGCTCCGAGCTCGTCCTCGGCACCGTCGCTCGCCGCCAAGCGGGGCCCGCGGACTCCCCCGCCGAGAGCTACCTCGAATCCAGGGTTTCATTCAGCGAGGAGAGGGTGATGGACGCGGATAGCAAGGCCGTGATGATGGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU176436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCGGCGGCAAGGTGCTCAACGTGGGATTCGGGATGGGGCTCGTGGACACGGCGATCCAGAGGTACGAGCCCGAGGAGCACACCATCGTCGAGGCCCACCCGGAGGTGTACGCCCGGATGCTCAAGCTCGGCTGGGGCGAGAAGAAGAATGTCAAGGTCGTGTTCGGACGGTGGCAGGACGTGCTCCCGCAGCTCGGCTCTTATGATGGTATATTCTTCGACACCTATGGAGAATACTACGAGGATATGAGAGAGTTCCACCAACATCTTCCTAAGCTATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]




>consensus_7055#0
TATCATCCAGTTGCACACCGAAAATGGCGGCGGCGGCGGAGAGCAAGGCGGGGAAATCGC
CGGAGGAGCTCCTCTGCGCGGCGGCGGAGTCCGGTGACGCGGAGGCCATCACCGGGCTCC
TCGCCGAAGGCGCCGACCCGACCCACTTCGATGCCTCCGGGTTGACCCCGCTGATGCACG
CGGCCACCGGTGGCCACGCCGCCGTCGTGCAGCTTCTCCTCGACGCCGGCGCGCCATGGA
ACGCGCTCTCCCCCACGGGGATCTCCGCGGGAGACCTCGCCTCCGATTCCGCCACCTTCG
ACCTCCTCCTCGACCACGCCCTCCGCTCCGAGCTCGTCCTCGGCACCGTCGCTCGCCGCC
AAGCGGGGCCCGCGGACTCCCCCGCCGAGAGCTACCTCGAATCCAGGGTTTCATTCAGCG
AGGAGAGGGTGATGGACGCGGATAGCAAGGCCGTGATGATGGAGTGGGAGCGGCCGCTGA
TGGAGGCGCACGCGCGGGCGGTGTGCTCCGGCGGCAAGGTGCTCAACGTGGGATTCGGGA
TGGGGCTCGTGGACACGGCGATCCAGAGGTACGAGCCCGAGGAGCACACCATCGTCGAGG
CCCACCCGGAGGTGTACGCCCGGATGCTCAAGCTCGGCTGGGGCGAGAAGAAGAATGTCA
AGGTCGTGTTCGGACGGTGGCAGGACGTGCTCCCGCAGCTCGGCTCTTATGATGGTATAT
TCTTCGACACCTATGGAGAATACTACGAGGATATGAGAGAGTTCCACCAACATCTTCCTA
AGCTATTGAAGCCTGGAGGGATCTACTCGTATTTCAATGGCCTCTGTGGCGATAATGCCT
TCTTCCACGTTGTGTATTGCCAGCTCGTAGCGTTAGAGTTGGCAAATCTTGGCTACTCGA
CACAGTTCATCCCGCTCCCAGTCAAAGATTGTCTTTCAGAGGAAATATGGAATGGGGTGA
AGCAGAAATACTGGCAATTGGATACTTACCACCTCCCAGTTTGCCAAGCAGAATCAGAAC
CGGAGCAATAATCCAATGGATTGTCAGCAAATTGTGCTAAGCGTCAATGGCCAGCAAATT
GTGCTAAGCGTCAATGGCTGGCTGCTTTGGCTGCTGCTACGTTTGTTCAAGCGTGTTTCT
GAATTCCATACACCATCTCCGGAGCTGGAACTTCCATCGGGCATGTGACGTTTCCACTGC
AATCGACTACTAATCTACTCCTGTAGATGCTTATCGGCTGTGGCCTGTAGCCAATGAAAG
AGAACTTTCACCGAAACTTTGTTTTCTTGGCAGTGATGTTACAATTTTGTTAGGTCTGCG
AATGCTGCTGTTTTTTTTTCTTTTTTTCGTTCCAAGCCGCCCGTGTCGTTGTTCTGGAAA
GGCGGGAACAACACCTAGCTTTCCCAGTTTTTTTTCTCAATGTTCTGGACGCGGTTCTCT
TCTTTTCTGCAGCAAACAAGGATAGTTCGAACT
clustalw multiple alignements is not computed in this case