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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7081#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2934 fasta sequence
[TCGAGAGAGGGTGCCTCGAAATGCACGTTGATATAAACAGCCCGCAGCGAAACCACCCCAAAAAACCAAAAACCCACCACCCCCACGCGGTGCCACTGCCACCGCCCCTCGCCGCTGACGACCGCCGCCGCCGCCGCCGCACGGACATTCCGCACACGCCCGCGGGGGGCGGGCGGCGCCGCGTCGCTGATCCAACGCGAGCACGTTCGTCGTCCATCCATCCTCCCGCTCGGATTTGGAGTCGGCAACCGCTCGGGCTCGCGTCGCGGCAACTGAAGCGGCGAAATTGCAACAGGCACAGGCAGGTATCAAGTTTCTAGTGCACTAAACAACCTTTGAGATGGGTACTGTAGAGAATATGGAAGGGAGAGAAGAGCGTTCGACTGATGTGGAACGGGATGGTAAACAAGGAAAAGAAGTTGAATCGGACTATGAACCAGCTAGAGACTCTGTTTCATCTCAGGGTGAGGCTAACAGCAATGAAGATACCAGAGCCAAAAGAGTCTCAAGGGTTCCAAAGAAGCTAGTGAAGAAAGATTCAAAGGAAAACAGCCCACGCTCAGGCAGAATTAATTCCAATCGCCAAGTGCAGACTAAGCTGCAATATATATCGTCAAACAATTTGCAGAGCAAATCTCCAAAGCCAAACAAAACATCTGATGGTGCTAAAACCATTGAGATAACAAAGCCAGATACAGTGACAGTTCCTTCTTGTCCTTCATCTGAGGTGTCTGAGGAGATGGATGATAAACCCATTGAGAATATAGGGACGGATGATAAATCCATTGAGGATGTAGCTGATGATAAGGCCACTGAGGGCACGGCCTCTTATGATAAGGCCACTGAAGGAAAAGCTGCTGATGATACGACCGTTGAGGACAACACCACTGATGAAAGGAGCATTGAGAGTGGCACTGATGATAGGACCATTGCGGGTATAGCAGCTGATGTTAAATCTAGTGAAGAGGCAAAGGAGATTGATATATTGGATGAAGCCCCAAATTGTGATCAGAGTACTGCTACTGACGAGGAAATAGCTGATACTGAAGAAAGCATAGCTTATGATGGTAAATCAGCTGCATATGAAAAGAGTGAGGAATTAGAATCTAAATGTGAAAGGTTGGAGCAGGAACTTCGAGAAGTTGCTGCCCTTGAGATTTCTCTTTATTCAGTAGTGCCAGAGCACGGTTGTTCATCGCATAAATTGCACACACCAGCTCGGCGTCTGTCCAGGCTATATGTTCATGCATCAAAGTTTTGGTCCTCTGATAAGAAAGCTTCTGTCACAAAGAACTTCGTTTCTGGGCTTGTCCTTGTTGCAAAGTCTTGTGGAAATGATGTTTCAAGGTTGACATTCTGGCTATCAAACACCGTTGTCCTAAGAGAGATCATTGCACAAACATTTGGCATTACACGCCAACCAAGTCTTGCTATGAAGGCTTTCAGCACAAATGTTAATGCAAAGATGCTCGGTAAGAACTCTTCACCAACGCGGCGGAAAAACAACTACAGTGGCAAGCATGCTAGACCTGCTATCTGGCCATTACCTGATGATTGGCGGGAAACTGGTACACTCGTGGCTGCACTGGAGAAGATTGAATCATGGATCTTTTCTCGGATTGTTGAGTCAGTGTGGTGGCAGGCATTGACACCCCACATGCAAACACTGGTGAAAGATATATCAAGTCCAAAGGCTGGGAGTTTGTTGGGACCTGCTTTGGGTGATCAGCAACAAGGGAACTTCTCCATTCATCTTTGGAAAACTGCTTTCCAAGATGCCTTCAGCAGAATATGTCCTCTTCGTGCTGGTGGACATGAGTGTGGATGCTTACCAGTGTTGGCAAAACTGGTGATGGAGCACTGTGTAGCTCGTTTAGACGTTGCTATGTTTAATGCAGTCCTGCGTGAATCTGCAAATGAAGTACCATCTGATCCTATATCTGACCCGATTGTCGACTCAAGAGTTCTACCGATTCCAGCTGGTGACTTCAGCTTTGGATCAGGTGCACAGCTGAAGAACTCGATCGGAAATTGGTCCCGATGGTTGCAAGATAAGTTTGGCATGGTTGCTGCTGCCCCTGAGAAGCATGGTCAAGCAGGAGATGAGAGTGATGACAGAAGTGGTGCTGCTGATTTTTATTCTTTCAAGCTGCTCAACGAGTTAAGTGATCTTCTGATGCTCCCAAAGGACATGCTTCTTGAAAAGTCCATCAGGAAGGAGGTCTGCCCTTCTATTGGCATTCCACTGGTAACAAGGATACTCTGCAACTTCACTCCTGACGAGTTCTGTCCTGAACCTGTTCCTGGAATGGTTTTAGAGGAGCTGAATGCCGAGAGCTTGCTGGAGCGCTTCACGGAGAAAGATGTGATCACCACATTCCCCTGCGTCGCGGCTCCTGTTGTCTACTGCCCCCCTTCACCGGAGGATGTCGCGGAGAAAGTAGCAGACGCAGGCG-GGAACGCGGAGCCGGACCTGAGGGCCTCCATGGTGCAGAGGAGAGGGTACACCAGCGACGACGACCTGGACGACCTGGGCAACCCCCTGGCGTCCCTGTACGACAGGAGCTCTCCACCCTCACCCTGCAACGGGGCCTCTCGTTCGACTACACGGCAAGGTGGCTCTATGTCGAACGCGAGATACGAGCTCCTGAGAGAAG-TATAT-GGT-CGG--AGAG-GCC-TGGT--TT-GAGTAACCAGTGAAAGTGTGGAACGGAAGACGAAAAGAGAGCCTCTTGGTCTTGGGTTGCAGATTTGCTGTGAGGTGAACAAGGGGTTGGAAATTGGTCGGGAAGGAACTGCTTTGCAACAGACGCTGAATGAACGAACAGCACTTGGATATCCTCATGGCAAAATGCTAGAGTGTTTAGAACCCATCCCCCCATTCTTCTCATGTATATTTGCATTTTGATTCTGTTGAAGTGATTGGTTCACTCTTGGCAA]
[+] EMBL AK070460 [TCGAGAGAGGGTGCCTCGAAATGCACGTTGATATAAACAGCCCGCAGCGAAACCACCCCAAAAAACCAAAAACCCACCACCCCCACGCGGTGCCACTGCCACCGCCCCTCGCCGCTGACGACCGCCGCCGCCGCCGCCGCACGGACATTCCGCACACGCCCGCGGGGGGCGGGCGGCGCCGCGTCGCTGATCCAACGCGAGCACGTTCGTCGTCCATCCATCCTCCCGCTCGGATTTGGAGTCGGCAACCGCTCGGGCTCGCGTCGCGGCAACTGAAGCGGCGAAATTGCAACAGGCACAGGCAGGTATCAAGTTTCTAGTGCACTAAACAACCTTTGAGATGGGTACTGTAGAGAATATGGAAGGGAGAGAAGAGCGTTCGACTGATGTGGAACGGGATGGTAAACAAGGAAAAGAAGTTGAATCGGACTATGAACCAGCTAGAGACTCTGTTTCATCTCAGGGTGAGGCTAACAGCAATGAAGATACCAGAGCCAAAAGAGTCTCAAGGGTTCCAAAGAAGCTAGTGAAGAAAGATTCAAAGGAAAACAGCCCACGCTCAGGCAGAATTAATTCCAATCGCCAAGTGCAGACTAAGCTGCAATATATATCGTCAAACAATTTGCAGAGCAAATCTCCAAAGCCAAACAAAACATCTGATGGTGCTAAAACCATTGAGATAACAAAGCCAGATACAGTGACAGTTCCTTCTTGTCCTTCATCTGAGGTGTCTGAGGAGATGGATGATAAACCCATTGAGAATATAGGGACGGATGATAAATCCATTGAGGATGTAGCTGATGATAAGGCCACTGAGGGCACGGCCTCTTATGATAAGGCCACTGAAGGAAAAGCTGCTGATGATACGACCGTTGAGGACAACACCACTGATGAAAGGAGCATTGAGAGTGGCACTGATGATAGGACCATTGCGGGTATAGCAGCTGATGTTAAATCTAGTGAAGAGGCAAAGGAGATTGATATATTGGATGAAGCCCCAAATTGTGATCAGAGTACTGCTACTGACGAGGAAATAGCTGATACTGAAGAAAGCATAGCTTATGATGGTAAATCAGCTGCATATGAAAAGAGTGAGGAATTAGAATCTAAATGTGAAAGGTTGGAGCAGGAACTTCGAGAAGTTGCTGCCCTTGAGATTTCTCTTTATTCAGTAGTGCCAGAGCACGGTTGTTCATCGCATAAATTGCACACACCAGCTCGGCGTCTGTCCAGGCTATATGTTCATGCATCAAAGTTTTGGTCCTCTGATAAGAAAGCTTCTGTCACAAAGAACTTCGTTTCTGGGCTTGTCCTTGTTGCAAAGTCTTGTGGAAATGATGTTTCAAGGTTGACATTCTGGCTATCAAACACCGTTGTCCTAAGAGAGATCATTGCACAAACATTTGGCATTACACGCCAACCAAGTCTTGCTATGAAGGCTTTCAGCACAAATGTTAATGCAAAGATGCTCGGTAAGAACTCTTCACCAACGCGGCGGAAAAACAACTACAGTGGCAAGCATGCTAGACCTGCTATCTGGCCATTACCTGATGATTGGCGGGAAACTGGTACACTCGTGGCTGCACTGGAGAAGATTGAATCATGGATCTTTTCTCGGATTGTTGAGTCAGTGTGGTGGCAGGCATTGACACCCCACATGCAAACACTGGTGAAAGATATATCAAGTCCAAAGGCTGGGAGTTTGTTGGGACCTGCTTTGGGTGATCAGCAACAAGGGAACTTCTCCATTCATCTTTGGAAAACTGCTTTCCAAGATGCCTTCAGCAGAATATGTCCTCTTCGTGCTGGTGGACATGAGTGTGGATGCTTACCAGTGTTGGCAAAACTGGTGATGGAGCACTGTGTAGCTCGTTTAGACGTTGCTATGTTTAATGCAGTCCTGCGTGAATCTGCAAATGAAGTACCATCTGATCCTATATCTGACCCGATTGTCGACTCAAGAGTTCTACCGATTCCAGCTGGTGACTTCAGCTTTGGATCAGGTGCACAGCTGAAGAACTCGATCGGAAATTGGTCCCGATGGTTGCAAGATAAGTTTGGCATGGTTGCTGCTGCCCCTGAGAAGCATGGTCAAGCAGGAGATGAGAGTGATGACAGAAGTGGTGCTGCTGATTTTTATTCTTTCAAGCTGCTCAACGAGTTAAGTGATCTTCTGATGCTCCCAAAGGACATGCTTCTTGAAAAGTCCATCAGGAAGGAGGTCTGCCCTTCTATTGGCATTCCACTGGTAACAAGGATACTCTGCAACTTCACTCCTGACGAGTTCTGTCCTGAACCTGTTCCTGGAATGGTTTTAGAGGAGCTGAATGCCGAGAGCTTGCTGGAGCGCTTCACGGAGAAAGATGTGATCACCACATTCCCCTGCGTCGCGGCTCCTGTTGTCTACTGCCCCCCTTCACCGGAGGATGTCGCGGAGAAAGTAGCAGACGCAGGCG GGAACGCGGAGCCGGACCTGAGGGCCTCCATGGTGCAGAGGAGAGGGTACACCAGCGACGACGACCTGGACGACCTGGGCAACCCCCTGGCGTCCCTGTACGACAGGAGCTCTCCACCCTCACCCTGCAACGGGGCCTCTCGTTCGACTACACGGCAAGGTGGCTCTATGTCGAACGCGAGATACGAGCTCCTGAGAGAAG TATAT GGT CGG AGAG GCC TGGT TT GAGTAACCAGTGAAAGTGTGGAACGGAAGACGAAAAGAGAGCCTCTTGGTCTTGGGTTGCAGATTTGCTGTGAGGTGAACAAGGGGTTGGAAATTGGTCGGGAAGGAACTGCTTTGCAACAGACGCTGAATGAACGAACAGCACTTGGATATCCTCATGGCAAAATGCTAGAGTG ]
[+] EMBL OSS12041A [ TGCAACTTCACTCCTGACGAGTTCTGTCCTGAACCTGTTCCTGGAATGGTTTTAGAGGAGCTGAATGCCGAGAGCTTGCTGGAGCGCTTCACGGAGAAAGATGTGATCACCACATTCCCCTGCGTCGCGGCTCCTGTTGTCTACTGCCCCCCTTCACCGGAGGATGTNGCGNAGAAAGTAGCAGACGCAGGCGAAGAACGCGNAG CGGACCTGAGGGCCTCCATGGTGCAGAGGAGAGGGTACACCAGCGACGACGACCTGGACGACCTGGGCAACCCCCTGGCGTCCCTGTACGACAGGAGCTCTCCACCCTCACCCTGCAACGGGGCCTCTCGTTCGACTACACGGCAAGGTGGTTCTATGTCGAACGCGAGATACGAGCTCCTGAGAGAAG TATAT GGT CGT AGAG GCC TGGT TT GAGT ACCAGTGAAAGTGTGG ACGGAAGNCGAAAAGAGA ]
[+] EMBL CA999908 [ GACGCAGGCG GGAACGCGGAGCCGGACCTGAGGGCCTCCATGGTGCAGAGGAGAGGGTACACCAGCGACGACGACCTGGACGACCTGGGCAACCCCCTGGCGTCCCTGTACGACAGGAGCTCTCCACCCTCACCCTGCAACGGGGCCTCTCGTTCGACTACACGGCAAGGTGGCTCTATGTCGAACGCGAGATACGAGCTCCTGAGAGAAG TATAT GGT CGG AGAG GCC TGGT TT GAGTAACCAGTGAAAGTGTGGAACGGAAGACGAAAAGAGAGCCT ]
[+] EMBL AU096064 [ naAAGTTATATNGGTCCGGTAAGAGNGCCTTGGTTNTTNGAGTAACCAGTGAAAGTGTGGAACGGAAGACGAAAAGAGAGCCTCTTGGTCTTGGGTTGCAGATTTGCTGTGAGGTGAACAAGGGGTTGGAAATTGGTCGGGAAGGAACTGCTTTGCAACAGACGCTGAATGAACGAACAGCACTTGGATATCCTCATGGCAAAATGCTAGAGTGTTTAGAACCCATCCCCCCATTCTTCTCATGTATATTTGCATTTTGATTCTGTTGAAGTGATTGGTTCACTCTTGGCAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||