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Oryza sativa
cluster # 7091 cluster # 7091       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7091#0 length = 1187 sequences # 4  

consensusID : consensus_7091#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1187
fasta sequence
                              [AGCCGCCACACCCAACCTCCCGCCGCCGTCGCCAGCCAGCCAGCCATGGGGAGCCGGCTGGGTCGCCGCGTGATCCACTTCGCCAACCTCCCCCTCAAGCTCATGCTCCCTCCCGCGCCGCTCTCCTCCGTCCAGGAGTTCGCCGTCAAGACCGTCCCCTCCGCCTCCAAGGTCGACATCCGCCGCTGCCTCGAGTCCATGTACGGCTTCTCCGTCGCCGAGGTCCGCACCCTCAACATGGAGGGCAAGAAGCTGCGCCGGGGCCCCTTCCTCGCCGCCAAGCCCGACTACAAGAAGGCCTACGTCACCCTCCGCGCCCCGCTCCCCGTCTCCCCCGACCTCTTCCCCATTGGGCTTGTCCTCGGCGAGAGGGAGCGCAAGGCCAGCGCCGCCGCCGCCAGGAGGAAGGCGGTGGAGGGCGCCGAGGTGGAAGGGGAGGGCAAGGGGAAGCACTGGATGGAGGATGAGAAGGTGGGCTTCTCCAGGGCCGGCCGCGGCAAGGTGGTGTACGGCAACCCCGGGAGGCTGGGGAAGAAGAGGAATGGAGGTACCAAGGTGAAAGACAGAGCCGGAGAGGAAGTGGGGAAGTTCCCATGGAGCGGGACGCGTCTTGCTACCGAGAAGAAACCTGCTAGGAAACAGCAGTATGCCCCCAAGAAGAAGGGCATAGTCCTGAAGCAGAAGTCATGGAAGGGATCCGTGCATCGGCAACCAAAGAAGAAGGTGGAAGCTTAGAACCTTGAGTCGCTGCATTGCGATCATGAGTGCACTGTGCCACAGAGCAGGACGCGAGCGGTAGATCCATGAATCACAATGCCAGATCAGTCTTGTTTTTCATTCACAGAATAAAGAGCAATATTTTGGCATATGTATGGCTTTGGTTACTTTGATATCTCAGGCTTGGTTTTCTGACACATGAGGCCAGGAAGGTGAATGGTAGTCAAGTTTGTGCCAACCTGTTACTGATGTCCTTAGATTTCTTTTGAGATGTCTATTTGTCATCAATCACAACTGAGTATGTACAACTGATGCCTCCTCA-TTTTTTTTTTGTTCTTGTCAATTACATATACCTGTTATTCCCGTGGATTGGTATCATATGCTGTTTCTGAGGCTCATGTATCAGTTGTTTTTGCATTTCAATTGTCACTATAGAAAGAAAAGCTGCATTCTTTGAAAGAAAAAAAAAA]

[+] EMBL AK061243             [AGCCGCCACACCCAACCTCCCGCCGCCGTCGCCAGCCAGCCAGCCATGGGGAGCCGGCTGGGTCGCCGCGTGATCCACTTCGCCAACCTCCCCCTCAAGCTCATGCTCCCTCCCGCGCCGCTCTCCTCCGTCCAGGAGTTCGCCGTCAAGACCGTCCCCTCCGCCTCCAAGGTCGACATCCGCCGCTGCCTCGAGTCCATGTACGGCTTCTCCGTCGCCGAGGTCCGCACCCTCAACATGGAGGGCAAGAAGCTGCGCCGGGGCCCCTTCCTCGCCGCCAAGCCCGACTACAAGAAGGCCTACGTCACCCTCCGCGCCCCGCTCCCCGTCTCCCCCGACCTCTTCCCCATTGGGCTTGTCCTCGGCGAGAGGGAGCGCAAGGCCAGCGCCGCCGCCGCCAGGAGGAAGGCGGTGGAGGGCGCCGAGGTGGAAGGGGAGGGCAAGGGGAAGCACTGGATGGAGGATGAGAAGGTGGGCTTCTCCAGGGCCGGCCGCGGCAAGGTGGTGTACGGCAACCCCGGGAGGCTGGGGAAGAAGAGGAATGGAGGTACCAAGGTGAAAGACAGAGCCGGAGAGGAAGTGGGGAAGTTCCCATGGAGCGGGACGCGTCTTGCTACCGAGAAGAAACCTGCTAGGAAACAGCAGTATGCCCCCAAGAAGAAGGGCATAGTCCTGAAGCAGAAGTCATGGAAGGGATCCGTGCATCGGCAACCAAAGAAGAAGGTGGAAGCTTAGAACCTTGAGTCGCTGCATTGCGATCATGAGTGCACTGTGCCACAGAGCAGGACGCGAGCGGTAGATCCATGAATCACAATGCCAGATCAGTCTTGTTTTTCATTCACAGAATAAAGAGCAATATTTTGGCATATGTATGGCTTTGGTTACTTTGATATCTCAGGCTTGGTTTTCTGACACATGAGGCCAGGAAGGTGAATGGTAGTCAAGTTTGTGCCAACCTGTTACTGATGTCCTTAGATTTCTTTTGAGATGTCTATTTGTCATCAATCACAACTGAGTATGTACAACTGATGCCTCCTCA TTTTTTTTTTGTTCTTGTCAATTACATATACCTGTTATTCCCGTG                                                                                                       ]
[+] EMBL AK104106             [ GCCGCCACACCCAACCTCCCGCCGCCGTCGCCAGCCAGCCAGCCATGGGGAGCCGGCTGGGTCGCCGCGTGATCCACTTCGCCAACCTCCCCCTCAAGCTCATGCTCCCTCCCGCGCCGCTCTCCTCCGTCCAGGAGTTCGCCGTCAAGACCGTCCCCTCCGCCTCCAAGGTCGACATCCGCCGCTGCCTCGAGTCCATGTACGGCTTCTCCGTCGCCGAGGTCCGCACCCTCAACATGGAGGGCAAGAAGCTGCGCCGGGGCCCCTTCCTCGCCGCCAAGCCCGACTACAAGAAGGCCTACGTCACCCTCCGCGCCCCGCTCCCCGTCTCCCCCGACCTCTTCCCCATTGGGCTTGTCCTCGGCGAGAGGGAGCGCAAGGCCAGCGCCGCCGCCGCCAGGAGGAAGGCGGTGGAGGGCGCCGAGGTGGAAGGGGAGAGCAAGGGGAAGCACTGGATGGAGGATGAGAAGGTGGGCTTCTCCAGGGCCGGCCGCGGCAAGGTGGTGTACGGCAACCCCGGGAGGCTGGGGAAGAAGAGGAATGGAGGTACCAAGGTGAAAGACAGAGCCGGAGAGGAAGTGGGGAAGTTCCCATGGAGCGGGACGCGTCTTGCTACCGAGAAGAAACCTGCTAGGAAACAGCAGTATGCCCCCAAGAAGAAGGGCATAGTCCTGAAGCAGAAGTCATGGAAGGGATCCGTGCATCGGCAACCAAAGAAGAAGGTGGAAGCTTAGAACCTTGAGTCGCTGCATTGCGATCATGAGTGCACTGTGCCACAGAGCAGGACGCGAGCGGTAGATCCATGAATCACAATGCCAGATCAGTCTTGTTTTTCATTCACAGAATAAAGAGCAATATTTTGGCATATGTATGGCTTTGGTTACTTTGATATCTCAGGCTTGGTTTTCTGACACATGAGGCCAGGAAGGTGAATGGTAGTCAAGTTTGTGCCAACCTGTTACTGATGTCCTTAGATTTCTTTTGAGATGTCTATTTGTCATCAATCACAACTGAGTATGTACAACTGATGCCTCCTCA TTTTTTTTTTGTTCTTGTCAATTACATATACCTGTTATTCCC                                                                                                          ]
[+] EMBL AK101796             [  CCGCCACACCCAACCTCCCGCCGCCGTCGCCAGCCAGCCAGCCATGGGGAGCCGGCTGGGTCGCCGCGTGATCCACTTCGCCAACCTCCCCCTCAAGCTCATGCTCCCTCCCGCGCCGCTCTCCTCCGTCCAGGAGTTCGCCGTCAAGACCGTCCCCTCCGCCTCCAAGGTCGACATCCGCCGCTGCCTCGAGTCCATGTACGGCCTCTCCGTCGCCGAGGTCCGCACCCTCAACATGGAGGGCAAGAAGCTGCGCCGGGGCCCCTTCCTCGCCGCCAAGCCCGACTACAAGAAGGCCTACGTCACCCTCCGCGCCCCGCTCCCCGTCTCCCCCGACCTCTTCCCCATTGGGCTTGTCCTCGGCGAGAGGGAGCGCAAGGCCAGCGCCGCCGCCGCCAGGAGGAAGGCGGTGGAGGGCGCCGAGGTGGAAGGGGAGGGCAAGGGGAAGCACTGGATGGAGGATGAGAAGGTGGGCTTCTCCAGGGCCGGCCGCGGCAAGGTGGTGTACGGCAACCCCGGGAGGCTGGGGAAGAAGAGGAATGGAGGTACCAAGGTGAAAGACAGAGCCGGAGAGGAAGTGGGGAAGTTCCCATGGAGCGGGACGCGTCTTGCTACCGAGAAGAAACCTGCTAGGAAACAGCAGTATGCCCCCAAGAAGAAGGGCATAGTCCTGAAGCAGAAGTCATGGAAGGGATCCGTGCATCGGCAACCAAAGAAGAAGGTGGAAGCTTAGAACCTTGAGTCGCTGCATTGCGATCATGAGTGCACTGTGCCACAGAGCAGGACGCGAGCGGTAGATCCATGAATCACAATGCCAGATCAGTCTTGTTTTTCATTCACAGAATAAAGAGCAATATTTTGGCATATGTATGGCTTTGGTTACTTTGATATCTCAGGCTTGGTTTTCTGACACATGAGGCCAGGAAGGTGAATGGTAGTCAAGTTTGTGCCAACCTGTTACTGATGTCCTTAGATTTCTTTTGAGATGTCTATTTGTCATCAATCACAACTGAGTATGTACAACTGATGCCTCCTCATTTTTTTTTTTGTTCTTGTCAATTACATATACCTGTTATTCCCGTGGATTGGTATCATATGCTGTT                                                                                   ]
[-] EMBL CA761768             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       agacaAGGGGAAGTGGGGAAGTTCCCATGGAGCGGGACGCGTCTTGCTACCGAGAAGAAACCTGCTAGGAAACAGCAGTATGCCCCCAAGAAGAAGGGCATAGTCCTGAAGCAGAAGTCATGGAAGGGATCCGTGCATCGGCAACCA   AAGAAGGTGGAAGCTTAGAACCTTGAGTCGCTGCATTGCGATCATGAGTGCACTGTGCCACAGAGCAGGACGCGAGCGGTAGATCCATGAATCACAATGCCAGATCAGTCTTGTTTTTCATTCACAGAATAAAGAGCAATATTTTGGCATATGTATGGCTTTGCTTACTTTGATATCTCAGGGTTGGTTTTCTGACACATGAGGCCAGGAAGGTGAATGGTAGTCAAGTTTGTGCCAACCTGTTACTGATGTCCTTAGATTTCTTTTGAGATGTCTATTTGTCATCAATCACAACTGAGTATGTACAACTGATGCCTCCTCA TTTTTTTTTTGTTCTTGTCAATTACATATACCTGTTATTCCCGTGGATTGGTATCATATGCTGTTTCTGAGGCTCATGTATCAGTTGTTTTTGCATTTCAATTGTCACTATAGAAAGAAAAGCTGCATTCTTTGAAAGAAAAAAAAAA]


>consensus_7091#0 AGCCGCCACACCCAACCTCCCGCCGCCGTCGCCAGCCAGCCAGCCATGGGGAGCCGGCTG GGTCGCCGCGTGATCCACTTCGCCAACCTCCCCCTCAAGCTCATGCTCCCTCCCGCGCCG CTCTCCTCCGTCCAGGAGTTCGCCGTCAAGACCGTCCCCTCCGCCTCCAAGGTCGACATC CGCCGCTGCCTCGAGTCCATGTACGGCTTCTCCGTCGCCGAGGTCCGCACCCTCAACATG GAGGGCAAGAAGCTGCGCCGGGGCCCCTTCCTCGCCGCCAAGCCCGACTACAAGAAGGCC TACGTCACCCTCCGCGCCCCGCTCCCCGTCTCCCCCGACCTCTTCCCCATTGGGCTTGTC CTCGGCGAGAGGGAGCGCAAGGCCAGCGCCGCCGCCGCCAGGAGGAAGGCGGTGGAGGGC GCCGAGGTGGAAGGGGAGGGCAAGGGGAAGCACTGGATGGAGGATGAGAAGGTGGGCTTC TCCAGGGCCGGCCGCGGCAAGGTGGTGTACGGCAACCCCGGGAGGCTGGGGAAGAAGAGG AATGGAGGTACCAAGGTGAAAGACAGAGCCGGAGAGGAAGTGGGGAAGTTCCCATGGAGC GGGACGCGTCTTGCTACCGAGAAGAAACCTGCTAGGAAACAGCAGTATGCCCCCAAGAAG AAGGGCATAGTCCTGAAGCAGAAGTCATGGAAGGGATCCGTGCATCGGCAACCAAAGAAG AAGGTGGAAGCTTAGAACCTTGAGTCGCTGCATTGCGATCATGAGTGCACTGTGCCACAG AGCAGGACGCGAGCGGTAGATCCATGAATCACAATGCCAGATCAGTCTTGTTTTTCATTC ACAGAATAAAGAGCAATATTTTGGCATATGTATGGCTTTGGTTACTTTGATATCTCAGGC TTGGTTTTCTGACACATGAGGCCAGGAAGGTGAATGGTAGTCAAGTTTGTGCCAACCTGT TACTGATGTCCTTAGATTTCTTTTGAGATGTCTATTTGTCATCAATCACAACTGAGTATG TACAACTGATGCCTCCTCATTTTTTTTTTGTTCTTGTCAATTACATATACCTGTTATTCC CGTGGATTGGTATCATATGCTGTTTCTGAGGCTCATGTATCAGTTGTTTTTGCATTTCAA TTGTCACTATAGAAAGAAAAGCTGCATTCTTTGAAAGAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)