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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7120#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3286 fasta sequence
[CGCCACCGCCACCGCCTTCCCCTCGATCGCCGGAGCGGCGAGCCCACGGCGGCGAGCGCCGCAGCCATGTCGCGGGCTCTCCTCCCGCGCGGCAGCATTCTACTCGTCCTTCGACCGCGAGTCCCGTCCACACCCCACCGATGCTTCGCGATTGGGGCGGCGGCGGCAGTTGACGGCGGCGAGACGTGGCGGGGGCAACTCCGGCAGGGGGAGGGGGAGGGGAGGAGCAGGGCGGTGAAGGTGTCGGTGTGGTGGGACTTCCAGAGCTGCCACCTCCCGCAGGGCGCCAACCCGTGCCGCGTCGCCACGCGCGTCACGGCGGCGCTGCGGGACGCCGGCATCCGCGGCCCCGTCGACATCACCGCCTTAGGCGACGCCTACATGCTCCCCCGCGCCGTCCAGGAGGCTCTCGCCGCCACCGGCGTCGCCTTCTCGCACGTCCCTTCCAGTGGAAAGGGCGGTCCCGACCAATTGTTCATGGCTGATCTGACCTATTGGATTGCTCAGAATCCTCCACCGGCCCATTTCTTCCTTATATCTGGCAACAAAGGCCTTGCAAACATTCTGCATCGCCTCCGGATGAGCAATTATAATGTACTGCTTGCATGCCCCAGTGCTGACTCTAGTGTATTGTGCAGTGCAGCAACGATTATGTGGCCATGGGATGCTTTAGTTAAAGGGTTGGATTTCTCACCAAAACATTTTAACCAACCACCTGATGGTATATCCTTTTCTTGGTACGGTCACTATAGGGGACCCCTTGATGACTTGTTCTTGAACTCAGAGTCAGATGACTCTATGGCAGAGTCAGAGGACTCCCTGGCAGAGTCAAGGGACCCCAAGGCTTTTCAACCACATACCAAGTCAGTGAAACCACCTATTTTACCCAAATCTGTGGCCAATGGGGTTAGGCAAGTACTGTACTCCTTTCCTGAAGGTATCAGTCTTCCAAATCTTCGAGCAGAGCTTAGAAAGAATCATGTGTTCATGGATAAAGGATTATTTGGCTTCAAAAACTTCTCTTCTCTTCTCCAAGCCATGCCTGATGTTGTGAAGTTTATAGATCCTCTACCAGGTGAAAGAAACCAGCCTGCTGTGGTTGGGGTTTCCAAGAGATCAATGGAGCCTGCTGAGCAAATTTACAAGGGAAAGAGTTCTGCTCAAAGCAGTGGTGAGTTCAAACGCCTCGTTCAGACTCTTAATGAGAAACCACCATCATCACATGTCCCATCTTCTTCATCAGATATTTTATCTGCGGACCGCAAGAAAGTTCTAGCAGTTGATGCCCCATCTTCCCAATCTGACTTGTTATCTAGGAACCAAGAGAAAGCTCCCCCTGTTGATTTGACTACACAACCTGAAACACCTGCAAGCTGTATGGAAGCTGATGTGGAGAGTGTTGCTGGAGCTTCTGCCTTTACAGGAGAGCAAATTACTGTTGACAAAAAGGGGCTATTTGAAAGGATTTGTGTACTATGGAATGATACAGAGCCTGTTAAGCCTATGCTTTCTCCGTCTCAAGATGATACCCATTCTAAAGGCTCCAATGATTTACTAACTCAGTATGCCAATAGTAACGAACATAACAGTCTTTTGACAAGGACCTTGAAGATCTTTTCCACAACTGACAATTCAGATGGAGACAATGTTGACAGCACTTCAGCAATTAGCAGCAGTTTCTCAAATATGACTGCCAATGACCATTCGGACAAATTAAATGTCAAGGAGAATGTAGGGAATACGATCATCCATTCTAGTAGATCAGTTGACACGAGCAACGCTGAACATAAAGTTGGGTTTATAGAAAAAAGCAAAGGAATATTTAGCTGGGCTGCAAAGTGGTGGGCGTCTGGAAAACCAGACACAGATGACAATTTAAGTTCAGTACATATCAATGATGGAACAAGGGAAGAATCAGAAAAAGAATCTGCATTTGTAAAGACAGCTGCTACTGCAAGTGAACAGCAAGTAGGAGTTGAACTGTTCATGAAACCTTACTTCTGGGATGCACTACAGCAATATTTGTCTACCCCTCATGGATCAGATCTTGTTTCAAAAGCAAAGACAAGGGAGGAGTTAGCGCATGGACTACAGAAGCAAGGCCATTGGCCTCTAAAAAGCCTTGGTGGGAAACACCACCACCAATTAGTAGATTTGCTTATCTCAGAAAAGCAATGGATCAAAGAATCTTCATCACAAACGTCTCCTTTTCGACTTGCCCTCCCCCAGAGAAGAGCTCGTTCTCCACTACTTTCATTTTTTACGAATGGGAGGCCATCAGGCCAGCGTAAACATGTCGATGACAGAAGCCCAACTCTGTCTAGAACGTCGGTCCATGTTTTACCTACAAAAAATGGGAAGGGTCAGGCCAGCTGCAAGAGCAATGAGAATCAAAGTAAGAGTGATGACTTTTTGGAGAAAGAGCTTGGTCCAGTATCTGACAGTGGTAAACCATATCGACAAAATGATAAAGCAGTCCGGCATCATCCTCCTACCTGTTCAGATGATGAATTTTCTGATGATGAAAATCATGAGGTGGTCCAAGAGGCTGGGAGAGATGCAGCACAAAGTTCACTCTTCAAAATTATTGATTCGTGGAACACTAGTAAGACTATTTGTTCTAGCAAGAAACAGCACGGCATTGGTGGTATAGTGGACTGCTCTAGAATCAACAGAGGTAATGGTGGTGACAATTCGATCACAGAAAATGCAGAAAAGGCTACAAGCTTATCAAAACATTCTTATATGACCTCAGATTCAGATTCAGATTCAGATGAAGAGAAGTTATTCAACAGTGTCTTGGGCAGTCTGCAGAATGCAAAGAACTCAAGTTTGCCCGGTTGAAATGATGTATGCAGTCATACTAACCCCATGAACTCTTCTGTAATCAATTTGGTTCCATACCATCATGTGATAATTTGATCTTTCTGCCATTCTGGGCTAGGTGGAGGCGTGGAGCAGCTTGAGGATGCTTTAGAAACATCTTCCCAAGCTCAGTTAGATTTATGAAGATCACGTTACAGTAGAATGTTCTGTTTATTTTTTATTTTGTTGGAGAGGAATCCTCATATTCTTTTGAGATGCTAAGGTTTGTGCTGGTGTAGTTAATTAGTACTGGGCATCCTTAATTACCGGAAATTGGTAGGGGTACTAGGGTATAAGTCGATCTGACTTTGCCTACCGTAAGATATGTGCTTCTGCAATTGTTTTTCTGTACCTAGAGAGACGAACACGTCAAATGTTTGAGCTATTCTAACAAAAAAGTGAGACTCTATAGGTCAAAAAA]
[+] EMBL AK101314 [CGCCACCGCCACCGCCTTCCCCTCGATCGCCGGAGCGGCGAGCCCACGGCGGCGAGCGCCGCAGCCATGTCGCGGGCTCTCCTCCCGCGCGGCAGCATTCTACTCGTCCTTCGACCGCGAGTCCCGTCCACACCCCACCGATGCTTCGCGATTGGGGCGGCGGCGGCAGTTGACGGCGGCGAGACGTGGCGGGGGCAACTCCGGCAGGGGGAGGGGGAGGGGAGGAGCAGGGCGGTGAAGGTGTCGGTGTGGTGGGACTTCCAGAGCTGCCACCTCCCGCAGGGCGCCAACCCGTGCCGCGTCGCCACGCGCGTCACGGCGGCGCTGCGGGACGCCGGCATCCGCGGCCCCGTCGACATCACCGCCTTAGGCGACGCCTACATGCTCCCCCGCGCCGTCCAGGAGGCTCTCGCCGCCACCGGCGTCGCCTTCTCGCACGTCCCTTCCAGTGGAAAGGGCGGTCCCGACCAATTGTTCATGGCTGATCTGACCTATTGGATTGCTCAGAATCCTCCACCGGCCCATTTCTTCCTTATATCTGGCAACAAAGGCCTTGCAAACATTCTGCATCGCCTCCGGATGAGCAATTATAATGTACTGCTTGCATGCCCCAGTGCTGACTCTAGTGTATTGTGCAGTGCAGCAACGATTATGTGGCCATGGGATGCTTTAGTTAAAGGGTTGGATTTCTCACCAAAACATTTTAACCAACCACCTGATGGTATATCCTTTTCTTGGTACGGTCACTATAGGGGACCCCTTGATGACTTGTTCTTGAACTCAGAGTCAGATGACTCTATGGCAGAGTCAGAGGACTCCCTGGCAGAGTCAAGGGACCCCAAGGCTTTTCAACCACATACCAAGTCAGTGAAACCACCTATTTTACCCAAATCTGTGGCCAATGGGGTTAGGCAAGTACTGTACTCCTTTCCTGAAGGTATCAGTCTTCCAAATCTTCGAGCAGAGCTTAGAAAGAATCATGTGTTCATGGATAAAGGATTATTTGGCTTCAAAAACTTCTCTTCTCTTCTCCAAGCCATGCCTGATGTTGTGAAGTTTATAGATCCTCTACCAGGTGAAAGAAACCAGCCTGCTGTGGTTGGGGTTTCCAAGAGATCAATGGAGCCTGCTGAGCAAATTTACAAGGGAAAGAGTTCTGCTCAAAGCAGTGGTGAGTTCAAACGCCTCGTTCAGACTCTTAATGAGAAACCACCATCATCACATGTCCCATCTTCTTCATCAGATATTTTATCTGCGGACCGCAAGAAAGTTCTAGCAGTTGATGCCCCATCTTCCCAATCTGACTTGTTATCTAGGAACCAAGAGAAAGCTCCCCCTGTTGATTTGACTACACAACCTGAAACACCTGCAAGCTGTATGGAAGCTGATGTGGAGAGTGTTGCTGGAGCTTCTGCCTTTACAGGAGAGCAAATTACTGTTGACAAAAAGGGGCTATTTGAAAGGATTTGTGTACTATGGAATGATACAGAGCCTGTTAAGCCTATGCTTTCTCCGTCTCAAGATGATACCCATTCTAAAGGCTCCAATGATTTACTAACTCAGTATGCCAATAGTAACGAACATAACAGTCTTTTGACAAGGACCTTGAAGATCTTTTCCACAACTGACAATTCAGATGGAGACAATGTTGACAGCACTTCAGCAATTAGCAGCAGTTTCTCAAATATGACTGCCAATGACCATTCGGACAAATTAAATGTCAAGGAGAATGTAGGGAATACGATCATCCATTCTAGTAGATCAGTTGACACGAGCAACGCTGAACATAAAGTTGGGTTTATAGAAAAAAGCAAAGGAATATTTAGCTGGGCTGCAAAGTGGTGGGCGTCTGGAAAACCAGACACAGATGACAATTTAAGTTCAGTACATATCAATGATGGAACAAGGGAAGAATCAGAAAAAGAATCTGCATTTGTAAAGACAGCTGCTACTGCAAGTGAACAGCAAGTAGGAGTTGAACTGTTCATGAAACCTTACTTCTGGGATGCACTACAGCAATATTTGTCTACCCCTCATGGATCAGATCTTGTTTCAAAAGCAAAGACAAGGGAGGAGTTAGCGCATGGACTACAGAAGCAAGGCCATTGGCCTCTAAAAAGCCTTGGTGGGAAACACCACCACCAATTAGTAGATTTGCTTATCTCAGAAAAGCAATGGATCAAAGAATCTTCATCACAAACGTCTCCTTTTCGACTTGCCCTCCCCCAGAGAAGAGCTCGTTCTCCACTACTTTCATTTTTTACGAATGGGAGGCCATCAGGCCAGCGTAAACATGTCGATGACAGAAGCCCAACTCTGTCTAGAACGTCGGTCCATGTTTTACCTACAAAAAATGGGAAGGGTCAGGCCAGCTGCAAGAGCAATGAGAATCAAAGTAAGAGTGATGACTTTTTGGAGAAAGAGCTTGGTCCAGTATCTGACAGTGGTAAACCATATCGACAAAATGATAAAGCAGTCCGGCATCATCCTCCTACCTGTTCAGATGATGAATTTTCTGATGATGAAAATCATGAGGTGGTCCAAGAGGCTGGGAGAGATGCAGCACAAAGTTCACTCTTCAAAATTATTGATTCGTGGAACACTAGTAAGACTATTTGTTCTAGCAAGAAACAGCACGGCATTGGTGGTATAGTGGACTGCTCTAGAATCAACAGAGGTAATGGTGGTGACAATTCGATCACAGAAAATGCAGAAAAGGCTACAAGCTTATCAAAACATTCTTATATGACCTCAGATTCAGATTCAGATTCAGATGAAGAGAAGTTATTCAACAGTGTCTTGGGCAGTCTGCAGAATGCAAAGAACTCAAGTTTGCCCGGTTGAAATGATGTATGCAGTCATACTAACCCCATGAACTCTTCTGTAATCAATTTGGTTCCATACCATCATGTGATAATTTGATCTTTCTGCCATTCTGGGCTAGGTGGAGGCGTGGAGCAGCTTGAGGATGCTTTAGAAACATCTTCCCAAGCTCAGTTAGATTTATGAAGATCACGTTACAGTAGAATGTTCTGTTTATTTTTTATTTTGTTGGAGAGGAATCCTCATATTCTTTTGAGATGCTAAGGTTTGTGCTGGT ]
[+] EMBL CA761540 [ GATTCGTGGAACACTAGTAAGACTATTTGTTCTAGCAAGAAACAGCACGGCATTGGTGGTATAGTGGACTGCTCTAGAATCAACAGAGGTAATGGTGGTGACAATTCGATCACAGAAAATGCAGAAAAGGCTACAAGCTTATCAAAACATTCTTATATGACCTCAGATTCAGATTCAGATTCAGATGAAGAGAAGTTATTCAACAGTGTCTTGGGCAGTCTGCAGAATGCAAAGAACTCAAGTTTGCCCGGTTGAAATGATGTATGCAGTCATACTAACCCCATGAACTCTTCTGTAATCAATTTGGTTCCATACCATCATGTGATAATTTGATCGTTCTGCCATTCTGGGCTAGGTGGAGGCGTGGAGCAGCTTGAGCATGCTTTAGAAACATCTTCCCAAGCTCAGTTAGATTTATGAAGATCACGTTACAGTAGAATGTTCTGTTTATTTCTTATTTTGTAGGAGAGGAATCCTC ATTCTTATGAGATGCTAAGGTTTGCGCTGGTGTAGTTAATTAGTACTGGGCATCCTTAATTACCGGAAATTGGTAGGGGTACTAGGGTATAAGTCGATCTGACTTTGCCTACCGTAAGATATGTGCTTCTGCAATTGTTTTTCTGTACCTAGAGAGACGAACACGTCAAATGTTTGAGCTATTCTAACAAAAAAGTGAGACTCTATAGGTCAAAAAA]
consensusID : consensus_7120#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3002 fasta sequence
[CGCCACCGCCACCGCCTTCCCCTCGATCGCCGGAGCGGCGAGCCCACGGCGGCGAGCGCCGCAGCCATGTCGCGGGCTCTCCTCCCGCGCGGCAGCATTCTACTCGTCCTTCGACCGCGAGTCCCGTCCACACCCCACCGATGCTTCGCGATTGGGGCGGCGGCGGCAGTTGACGGCGGCGAGACGTGGCGGGGGCAACTCCGGCAGGGGGAGGGGGAGGGGAGGAGCAGGGCGGTGAAGGTGTCGGTGTGGTGGGACTTCCAGAGCTGCCACCTCCCGCAGGGCGCCAACCCGTGCCGCGTCGCCACGCGCGTCACGGCGGCGCTGCGGGACGCCGGCATCCGCGGCCCCGTCGACATCACCGCCTTAGGCGACGCCTACATGCTCCCCCGCGCCGTCCAGGAGGCTCTCGCCGCCACCGGCGTCGCCTTCTCGCACGTCCCTTCCAGTGGAAAGGGCGGTCCCGACCAATTGTTCATGGCTGATCTGACCTATTGGATTGCTCAGAATCCTCCACCGGCCCATTTCTTCCTTATATCTGGCAACAAAGGCCTTGCAAACATTCTGCATCGCCTCCGGATGAGCAATTATAATGTACTGCTTGCCTGCCCCAGTGCTGACTCTAGTGTATTGTGCAGTGCAGCAACGATTATGTGGCCATGGGATGCTTTAGTTAAAGGGTTGGATTTCTCACCAAAACATTTTAACCAACCACCTGATGGTATATCCTTTTCTTGGTACAGTCACTATAGGGGACCCCTTGATGACTTGTTCTTGAACTCAGAGTCAGATGACTCTATGGCAGAGTCAGAGGACTCCCTGGCAGAGTCAAGGGACTCCAAGGCTTTTCAACCACATACCAAGTCAGTGAAACCACCTATTTTACCCAAATCTGTGGCCAATGGGGTTAGGCAAGTACTGTACTCCTTTCCTGAAGGTATCAGTCTTCCAAATCTTCGAGCAGAGCTTAGAAAGAAGCATGTGTTCATGGATAAAGGATTATTTGGCTTCAAAAACTTCTCTTCTCTTCTCCAAGCCATGCCTGATGTTGTGAAGTTTATAGATCCTCTACCAGGTGAAAGAAACCAGCCTGCTGTGGTTGGGGTTTCCAAGAGATCAATGGAGCCTGCTGAGCAAATTTACAAGGGAAAGAGTTCTGCTCAAAGCAGTGGTGAGTTCAAACGCCTCGTTCAGACTCTTAATGAGAAACCACCATCATCACATGTCCCATCTTCTTCATCAGATATTTTATCTGCGGACCGCAAGAAAGTTCTAGCAGTTGATGCCCCATCTTCCCAATCTGACTTGTTATCTAGGAACCAAGAGAAAGCTCCCCCTGTTGATTTGACTACACAACCTGAAACACCTGCAAGCTGTATGGAAGCTGATGTGGAGAGTGTTGCTGGAGCTTCTGCCTTTACAGGAGAGCAAATTACTGTTGACAAAAAGGGGCTATTTGAAAGGATTTGTGTACTATGGAATGATACAGAGCCTGTTAAGCCTATGCTTTCTCCGTCTCAAGATGATACCCATTCTAAAGGCTCCAATGATTTACTAACTCAGTATGCCAATAGTAACGAACATAACAGTCTTTTGACAAGGACCTTGAAGATCTTTTCCACAACTGACAATTCAGATGGAGACAATGTTGACAGCACTTCAGCAATTAGCAGCAGTTTCTCAAATATGACTGCCAATGACCATTCGGACAAATTAAATGTCAAGGAGAATGTAGGGAATACGATCATCCATTCTAGTAGATCAGTTGACACGAGCAACGCTGAACATAAAGTTGGGTTTATAGAAAAAAGCAAAGGAATATTTAGCTGGGCTGCAAAGTGGTGGGCGTCTGGAAAACCAGACACAGATGACAATTTAAGTTCAGTACATATCAATGATGGAACAAGGGAAGAATCAGAAAAAGAATCTGCATTTGTAAAGACAGCTGCTACTGCAAGTGAACAGCAAGTAGGAGTTGAACTGTTCATGAAACCTTACTTCTGGGATGCACTACAGCAATATTTGTCTACCCCTCATGGATCAGATCTTGTTTCAAAAGCAAAGACAAGGGAGGAGTTAGCGCATGGACTACAGAAGCAAGGCCATTGGCCTCTAAAAAGCCTTGGTGGGAAACACCACCACCAATTAGTAGATTTGCTTATCTCAGAAAAGCAATGGATCAAAGAATCTTCATCACAAACGTCTCCTTTTCGACTTGCCCTCCCCCAGAGAAGAGCTCGTTCTCCACTACTTTCATTTTTTACGAATGGAAGGCCATCAGGCCAGCGTAAACATGTCGATGACAGAAGCCCAACTCTGTCTAGAACGTCGGTCCATGTTTTACCTACAAAGAATGGGAAGGGTCAGGCCAGCTGCAAGAGCAATGAGAATCAAAGTAAGAGTGATGACTTTTTGGAGAAAGAGCTTGGTCCAGTATCTGACAGTGGTAAACCATATCGACAAAATGATAAAGCAGTCCGGCATCATCCTCCTACCTGTTCAGATGATGAATTTTCTGATGATGAAAATCATGAGGTGGTCCAAGAGGCTGGGAGAGATGCAGCACAAAGTTCACTCTTCAAAATTATTGATTCGTGGAACACTAGTAAGACTATTTGTTCTAGCAAGAAACAGCACGGCATTGGTGGTATAGTGGACTGCTCTAGAATCAACAGAGGTAATGGTGGTGACAATTCGATCACAGAAAATGCAGAAAAGGCTACAAGCTTATCAAAACATTCTTATATGACCTCAGATTCAGATTCAGATTCAGATGAAGAGAAGTTATTCAACAGTGTCTTGGGCAGTCTGCAGAATGCAAAGAACTCAAGTTTGCCCGGTTGAAATGATGTGGAGGCGTGGAGCAGCTTGAGGATGCTTTAGAAACATCTTCCCAAGCTCAGTTAGATTTATGAAGATCACGTTACAGTAGAATGTTCTGTTTATTTTTTATTTTGTTGGAGAGGAATCCTCATATTCTTTTGAGATGCTAAGGTTTGTGC]
[+] EMBL AK071335 [CGCCACCGCCACCGCCTTCCCCTCGATCGCCGGAGCGGCGAGCCCACGGCGGCGAGCGCCGCAGCCATGTCGCGGGCTCTCCTCCCGCGCGGCAGCATTCTACTCGTCCTTCGACCGCGAGTCCCGTCCACACCCCACCGATGCTTCGCGATTGGGGCGGCGGCGGCAGTTGACGGCGGCGAGACGTGGCGGGGGCAACTCCGGCAGGGGGAGGGGGAGGGGAGGAGCAGGGCGGTGAAGGTGTCGGTGTGGTGGGACTTCCAGAGCTGCCACCTCCCGCAGGGCGCCAACCCGTGCCGCGTCGCCACGCGCGTCACGGCGGCGCTGCGGGACGCCGGCATCCGCGGCCCCGTCGACATCACCGCCTTAGGCGACGCCTACATGCTCCCCCGCGCCGTCCAGGAGGCTCTCGCCGCCACCGGCGTCGCCTTCTCGCACGTCCCTTCCAGTGGAAAGGGCGGTCCCGACCAATTGTTCATGGCTGATCTGACCTATTGGATTGCTCAGAATCCTCCACCGGCCCATTTCTTCCTTATATCTGGCAACAAAGGCCTTGCAAACATTCTGCATCGCCTCCGGATGAGCAATTATAATGTACTGCTTGCCTGCCCCAGTGCTGACTCTAGTGTATTGTGCAGTGCAGCAACGATTATGTGGCCATGGGATGCTTTAGTTAAAGGGTTGGATTTCTCACCAAAACATTTTAACCAACCACCTGATGGTATATCCTTTTCTTGGTACAGTCACTATAGGGGACCCCTTGATGACTTGTTCTTGAACTCAGAGTCAGATGACTCTATGGCAGAGTCAGAGGACTCCCTGGCAGAGTCAAGGGACTCCAAGGCTTTTCAACCACATACCAAGTCAGTGAAACCACCTATTTTACCCAAATCTGTGGCCAATGGGGTTAGGCAAGTACTGTACTCCTTTCCTGAAGGTATCAGTCTTCCAAATCTTCGAGCAGAGCTTAGAAAGAAGCATGTGTTCATGGATAAAGGATTATTTGGCTTCAAAAACTTCTCTTCTCTTCTCCAAGCCATGCCTGATGTTGTGAAGTTTATAGATCCTCTACCAGGTGAAAGAAACCAGCCTGCTGTGGTTGGGGTTTCCAAGAGATCAATGGAGCCTGCTGAGCAAATTTACAAGGGAAAGAGTTCTGCTCAAAGCAGTGGTGAGTTCAAACGCCTCGTTCAGACTCTTAATGAGAAACCACCATCATCACATGTCCCATCTTCTTCATCAGATATTTTATCTGCGGACCGCAAGAAAGTTCTAGCAGTTGATGCCCCATCTTCCCAATCTGACTTGTTATCTAGGAACCAAGAGAAAGCTCCCCCTGTTGATTTGACTACACAACCTGAAACACCTGCAAGCTGTATGGAAGCTGATGTGGAGAGTGTTGCTGGAGCTTCTGCCTTTACAGGAGAGCAAATTACTGTTGACAAAAAGGGGCTATTTGAAAGGATTTGTGTACTATGGAATGATACAGAGCCTGTTAAGCCTATGCTTTCTCCGTCTCAAGATGATACCCATTCTAAAGGCTCCAATGATTTACTAACTCAGTATGCCAATAGTAACGAACATAACAGTCTTTTGACAAGGACCTTGAAGATCTTTTCCACAACTGACAATTCAGATGGAGACAATGTTGACAGCACTTCAGCAATTAGCAGCAGTTTCTCAAATATGACTGCCAATGACCATTCGGACAAATTAAATGTCAAGGAGAATGTAGGGAATACGATCATCCATTCTAGTAGATCAGTTGACACGAGCAACGCTGAACATAAAGTTGGGTTTATAGAAAAAAGCAAAGGAATATTTAGCTGGGCTGCAAAGTGGTGGGCGTCTGGAAAACCAGACACAGATGACAATTTAAGTTCAGTACATATCAATGATGGAACAAGGGAAGAATCAGAAAAAGAATCTGCATTTGTAAAGACAGCTGCTACTGCAAGTGAACAGCAAGTAGGAGTTGAACTGTTCATGAAACCTTACTTCTGGGATGCACTACAGCAATATTTGTCTACCCCTCATGGATCAGATCTTGTTTCAAAAGCAAAGACAAGGGAGGAGTTAGCGCATGGACTACAGAAGCAAGGCCATTGGCCTCTAAAAAGCCTTGGTGGGAAACACCACCACCAATTAGTAGATTTGCTTATCTCAGAAAAGCAATGGATCAAAGAATCTTCATCACAAACGTCTCCTTTTCGACTTGCCCTCCCCCAGAGAAGAGCTCGTTCTCCACTACTTTCATTTTTTACGAATGGAAGGCCATCAGGCCAGCGTAAACATGTCGATGACAGAAGCCCAACTCTGTCTAGAACGTCGGTCCATGTTTTACCTACAAAGAATGGGAAGGGTCAGGCCAGCTGCAAGAGCAATGAGAATCAAAGTAAGAGTGATGACTTTTTGGAGAAAGAGCTTGGTCCAGTATCTGACAGTGGTAAACCATATCGACAAAATGATAAAGCAGTCCGGCATCATCCTCCTACCTGTTCAGATGATGAATTTTCTGATGATGAAAATCATGAGGTGGTCCAAGAGGCTGGGAGAGATGCAGCACAAAGTTCACTCTTCAAAATTATTGATTCGTGGAACACTAGTAAGACTATTTGTTCTAGCAAGAAACAGCACGGCATTGGTGGTATAGTGGACTGCTCTAGAATCAACAGAGGTAATGGTGGTGACAATTCGATCACAGAAAATGCAGAAAAGGCTACAAGCTTATCAAAACATTCTTATATGACCTCAGATTCAGATTCAGATTCAGATGAAGAGAAGTTATTCAACAGTGTCTTGGGCAGTCTGCAGAATGCAAAGAACTCAAGTTTGCCCGGTTGAAATGATGTGGAGGCGTGGAGCAGCTTGAGGATGCTTTAGAAACATCTTCCCAAGCTCAGTTAGATTTATGAAGATCACGTTACAGTAGAATGTTCTGTTTATTTTTTATTTTGTTGGAGAGGAATCCTCATATTCTTTTGAGATGCTAAGGTTTGTGC]
[+] EMBL CF306193 [ cacgaggCCAATCTGACTCGTTATCTAGGAACCAAGAGAAAGCTCCCCCTGTTGATTTGACTACACAACCTGAAACACCTGCAAGCTGTATGGAAGCTGATGTGGAGAGTGTTGCTGGAGCTTCTGCCTTTACAGGAGAGCATAATACTGTTGACAAAAAGGGGCTATTTGAAAGGATTTGTGTACTATTTTATGATACAGAGCCTGTTAAGCCTATGCTTTCTCCGTCTCAAGATGATACCCATTCTAAAGGCTCCAATGATTTACTAACTCAGTATGCCAATAGTAACGAACATAACAGTCTTTTGACAAGGACCTTGAAGATCTTTTCCACAACTGACAATTCAGATGGAGACAATGTTGACAGCACTTCAGCAATTAGCAGCAGTTTCTCAAATATGACTGCCAATGACCATTCGGACAAATTAAATGTCAAGGAGAATGTAGGGAATACGATCATCCATTCTAGTAGATCAGTTGACACGAGCAACGCTGAACATAAAGTTGGGTTTATAGAAAAAAGCAAAGGAATATTTAGCTGGGCTGCAAAGTGGTGGGCGTCTGGAAAACCAGACACAGATGACAATTTAAGTTCAGTACATATCAATGATGGAACAAGGGAAGAATCAGAAAAAGAATCTGCATTTGTAAAGACAGCTGCTACTGCAAGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7120#0 CGCCACCGCCACCGCCTTCCCCTCGATCGCCGGAGCGGCGAGCCCACGGCGGCGAGCGCC 60
consensus_7120#1 CGCCACCGCCACCGCCTTCCCCTCGATCGCCGGAGCGGCGAGCCCACGGCGGCGAGCGCC 60
************************************************************
consensus_7120#0 GCAGCCATGTCGCGGGCTCTCCTCCCGCGCGGCAGCATTCTACTCGTCCTTCGACCGCGA 120
consensus_7120#1 GCAGCCATGTCGCGGGCTCTCCTCCCGCGCGGCAGCATTCTACTCGTCCTTCGACCGCGA 120
************************************************************
consensus_7120#0 GTCCCGTCCACACCCCACCGATGCTTCGCGATTGGGGCGGCGGCGGCAGTTGACGGCGGC 180
consensus_7120#1 GTCCCGTCCACACCCCACCGATGCTTCGCGATTGGGGCGGCGGCGGCAGTTGACGGCGGC 180
************************************************************
consensus_7120#0 GAGACGTGGCGGGGGCAACTCCGGCAGGGGGAGGGGGAGGGGAGGAGCAGGGCGGTGAAG 240
consensus_7120#1 GAGACGTGGCGGGGGCAACTCCGGCAGGGGGAGGGGGAGGGGAGGAGCAGGGCGGTGAAG 240
************************************************************
consensus_7120#0 GTGTCGGTGTGGTGGGACTTCCAGAGCTGCCACCTCCCGCAGGGCGCCAACCCGTGCCGC 300
consensus_7120#1 GTGTCGGTGTGGTGGGACTTCCAGAGCTGCCACCTCCCGCAGGGCGCCAACCCGTGCCGC 300
************************************************************
consensus_7120#0 GTCGCCACGCGCGTCACGGCGGCGCTGCGGGACGCCGGCATCCGCGGCCCCGTCGACATC 360
consensus_7120#1 GTCGCCACGCGCGTCACGGCGGCGCTGCGGGACGCCGGCATCCGCGGCCCCGTCGACATC 360
************************************************************
consensus_7120#0 ACCGCCTTAGGCGACGCCTACATGCTCCCCCGCGCCGTCCAGGAGGCTCTCGCCGCCACC 420
consensus_7120#1 ACCGCCTTAGGCGACGCCTACATGCTCCCCCGCGCCGTCCAGGAGGCTCTCGCCGCCACC 420
************************************************************
consensus_7120#0 GGCGTCGCCTTCTCGCACGTCCCTTCCAGTGGAAAGGGCGGTCCCGACCAATTGTTCATG 480
consensus_7120#1 GGCGTCGCCTTCTCGCACGTCCCTTCCAGTGGAAAGGGCGGTCCCGACCAATTGTTCATG 480
************************************************************
consensus_7120#0 GCTGATCTGACCTATTGGATTGCTCAGAATCCTCCACCGGCCCATTTCTTCCTTATATCT 540
consensus_7120#1 GCTGATCTGACCTATTGGATTGCTCAGAATCCTCCACCGGCCCATTTCTTCCTTATATCT 540
************************************************************
consensus_7120#0 GGCAACAAAGGCCTTGCAAACATTCTGCATCGCCTCCGGATGAGCAATTATAATGTACTG 600
consensus_7120#1 GGCAACAAAGGCCTTGCAAACATTCTGCATCGCCTCCGGATGAGCAATTATAATGTACTG 600
************************************************************
consensus_7120#0 CTTGCATGCCCCAGTGCTGACTCTAGTGTATTGTGCAGTGCAGCAACGATTATGTGGCCA 660
consensus_7120#1 CTTGCCTGCCCCAGTGCTGACTCTAGTGTATTGTGCAGTGCAGCAACGATTATGTGGCCA 660
***** ******************************************************
consensus_7120#0 TGGGATGCTTTAGTTAAAGGGTTGGATTTCTCACCAAAACATTTTAACCAACCACCTGAT 720
consensus_7120#1 TGGGATGCTTTAGTTAAAGGGTTGGATTTCTCACCAAAACATTTTAACCAACCACCTGAT 720
************************************************************
consensus_7120#0 GGTATATCCTTTTCTTGGTACGGTCACTATAGGGGACCCCTTGATGACTTGTTCTTGAAC 780
consensus_7120#1 GGTATATCCTTTTCTTGGTACAGTCACTATAGGGGACCCCTTGATGACTTGTTCTTGAAC 780
********************* **************************************
consensus_7120#0 TCAGAGTCAGATGACTCTATGGCAGAGTCAGAGGACTCCCTGGCAGAGTCAAGGGACCCC 840
consensus_7120#1 TCAGAGTCAGATGACTCTATGGCAGAGTCAGAGGACTCCCTGGCAGAGTCAAGGGACTCC 840
********************************************************* **
consensus_7120#0 AAGGCTTTTCAACCACATACCAAGTCAGTGAAACCACCTATTTTACCCAAATCTGTGGCC 900
consensus_7120#1 AAGGCTTTTCAACCACATACCAAGTCAGTGAAACCACCTATTTTACCCAAATCTGTGGCC 900
************************************************************
consensus_7120#0 AATGGGGTTAGGCAAGTACTGTACTCCTTTCCTGAAGGTATCAGTCTTCCAAATCTTCGA 960
consensus_7120#1 AATGGGGTTAGGCAAGTACTGTACTCCTTTCCTGAAGGTATCAGTCTTCCAAATCTTCGA 960
************************************************************
consensus_7120#0 GCAGAGCTTAGAAAGAATCATGTGTTCATGGATAAAGGATTATTTGGCTTCAAAAACTTC 1020
consensus_7120#1 GCAGAGCTTAGAAAGAAGCATGTGTTCATGGATAAAGGATTATTTGGCTTCAAAAACTTC 1020
***************** ******************************************
consensus_7120#0 TCTTCTCTTCTCCAAGCCATGCCTGATGTTGTGAAGTTTATAGATCCTCTACCAGGTGAA 1080
consensus_7120#1 TCTTCTCTTCTCCAAGCCATGCCTGATGTTGTGAAGTTTATAGATCCTCTACCAGGTGAA 1080
************************************************************
consensus_7120#0 AGAAACCAGCCTGCTGTGGTTGGGGTTTCCAAGAGATCAATGGAGCCTGCTGAGCAAATT 1140
consensus_7120#1 AGAAACCAGCCTGCTGTGGTTGGGGTTTCCAAGAGATCAATGGAGCCTGCTGAGCAAATT 1140
************************************************************
consensus_7120#0 TACAAGGGAAAGAGTTCTGCTCAAAGCAGTGGTGAGTTCAAACGCCTCGTTCAGACTCTT 1200
consensus_7120#1 TACAAGGGAAAGAGTTCTGCTCAAAGCAGTGGTGAGTTCAAACGCCTCGTTCAGACTCTT 1200
************************************************************
consensus_7120#0 AATGAGAAACCACCATCATCACATGTCCCATCTTCTTCATCAGATATTTTATCTGCGGAC 1260
consensus_7120#1 AATGAGAAACCACCATCATCACATGTCCCATCTTCTTCATCAGATATTTTATCTGCGGAC 1260
************************************************************
consensus_7120#0 CGCAAGAAAGTTCTAGCAGTTGATGCCCCATCTTCCCAATCTGACTTGTTATCTAGGAAC 1320
consensus_7120#1 CGCAAGAAAGTTCTAGCAGTTGATGCCCCATCTTCCCAATCTGACTTGTTATCTAGGAAC 1320
************************************************************
consensus_7120#0 CAAGAGAAAGCTCCCCCTGTTGATTTGACTACACAACCTGAAACACCTGCAAGCTGTATG 1380
consensus_7120#1 CAAGAGAAAGCTCCCCCTGTTGATTTGACTACACAACCTGAAACACCTGCAAGCTGTATG 1380
************************************************************
consensus_7120#0 GAAGCTGATGTGGAGAGTGTTGCTGGAGCTTCTGCCTTTACAGGAGAGCAAATTACTGTT 1440
consensus_7120#1 GAAGCTGATGTGGAGAGTGTTGCTGGAGCTTCTGCCTTTACAGGAGAGCAAATTACTGTT 1440
************************************************************
consensus_7120#0 GACAAAAAGGGGCTATTTGAAAGGATTTGTGTACTATGGAATGATACAGAGCCTGTTAAG 1500
consensus_7120#1 GACAAAAAGGGGCTATTTGAAAGGATTTGTGTACTATGGAATGATACAGAGCCTGTTAAG 1500
************************************************************
consensus_7120#0 CCTATGCTTTCTCCGTCTCAAGATGATACCCATTCTAAAGGCTCCAATGATTTACTAACT 1560
consensus_7120#1 CCTATGCTTTCTCCGTCTCAAGATGATACCCATTCTAAAGGCTCCAATGATTTACTAACT 1560
************************************************************
consensus_7120#0 CAGTATGCCAATAGTAACGAACATAACAGTCTTTTGACAAGGACCTTGAAGATCTTTTCC 1620
consensus_7120#1 CAGTATGCCAATAGTAACGAACATAACAGTCTTTTGACAAGGACCTTGAAGATCTTTTCC 1620
************************************************************
consensus_7120#0 ACAACTGACAATTCAGATGGAGACAATGTTGACAGCACTTCAGCAATTAGCAGCAGTTTC 1680
consensus_7120#1 ACAACTGACAATTCAGATGGAGACAATGTTGACAGCACTTCAGCAATTAGCAGCAGTTTC 1680
************************************************************
consensus_7120#0 TCAAATATGACTGCCAATGACCATTCGGACAAATTAAATGTCAAGGAGAATGTAGGGAAT 1740
consensus_7120#1 TCAAATATGACTGCCAATGACCATTCGGACAAATTAAATGTCAAGGAGAATGTAGGGAAT 1740
************************************************************
consensus_7120#0 ACGATCATCCATTCTAGTAGATCAGTTGACACGAGCAACGCTGAACATAAAGTTGGGTTT 1800
consensus_7120#1 ACGATCATCCATTCTAGTAGATCAGTTGACACGAGCAACGCTGAACATAAAGTTGGGTTT 1800
************************************************************
consensus_7120#0 ATAGAAAAAAGCAAAGGAATATTTAGCTGGGCTGCAAAGTGGTGGGCGTCTGGAAAACCA 1860
consensus_7120#1 ATAGAAAAAAGCAAAGGAATATTTAGCTGGGCTGCAAAGTGGTGGGCGTCTGGAAAACCA 1860
************************************************************
consensus_7120#0 GACACAGATGACAATTTAAGTTCAGTACATATCAATGATGGAACAAGGGAAGAATCAGAA 1920
consensus_7120#1 GACACAGATGACAATTTAAGTTCAGTACATATCAATGATGGAACAAGGGAAGAATCAGAA 1920
************************************************************
consensus_7120#0 AAAGAATCTGCATTTGTAAAGACAGCTGCTACTGCAAGTGAACAGCAAGTAGGAGTTGAA 1980
consensus_7120#1 AAAGAATCTGCATTTGTAAAGACAGCTGCTACTGCAAGTGAACAGCAAGTAGGAGTTGAA 1980
************************************************************
consensus_7120#0 CTGTTCATGAAACCTTACTTCTGGGATGCACTACAGCAATATTTGTCTACCCCTCATGGA 2040
consensus_7120#1 CTGTTCATGAAACCTTACTTCTGGGATGCACTACAGCAATATTTGTCTACCCCTCATGGA 2040
************************************************************
consensus_7120#0 TCAGATCTTGTTTCAAAAGCAAAGACAAGGGAGGAGTTAGCGCATGGACTACAGAAGCAA 2100
consensus_7120#1 TCAGATCTTGTTTCAAAAGCAAAGACAAGGGAGGAGTTAGCGCATGGACTACAGAAGCAA 2100
************************************************************
consensus_7120#0 GGCCATTGGCCTCTAAAAAGCCTTGGTGGGAAACACCACCACCAATTAGTAGATTTGCTT 2160
consensus_7120#1 GGCCATTGGCCTCTAAAAAGCCTTGGTGGGAAACACCACCACCAATTAGTAGATTTGCTT 2160
************************************************************
consensus_7120#0 ATCTCAGAAAAGCAATGGATCAAAGAATCTTCATCACAAACGTCTCCTTTTCGACTTGCC 2220
consensus_7120#1 ATCTCAGAAAAGCAATGGATCAAAGAATCTTCATCACAAACGTCTCCTTTTCGACTTGCC 2220
************************************************************
consensus_7120#0 CTCCCCCAGAGAAGAGCTCGTTCTCCACTACTTTCATTTTTTACGAATGGGAGGCCATCA 2280
consensus_7120#1 CTCCCCCAGAGAAGAGCTCGTTCTCCACTACTTTCATTTTTTACGAATGGAAGGCCATCA 2280
************************************************** *********
consensus_7120#0 GGCCAGCGTAAACATGTCGATGACAGAAGCCCAACTCTGTCTAGAACGTCGGTCCATGTT 2340
consensus_7120#1 GGCCAGCGTAAACATGTCGATGACAGAAGCCCAACTCTGTCTAGAACGTCGGTCCATGTT 2340
************************************************************
consensus_7120#0 TTACCTACAAAAAATGGGAAGGGTCAGGCCAGCTGCAAGAGCAATGAGAATCAAAGTAAG 2400
consensus_7120#1 TTACCTACAAAGAATGGGAAGGGTCAGGCCAGCTGCAAGAGCAATGAGAATCAAAGTAAG 2400
*********** ************************************************
consensus_7120#0 AGTGATGACTTTTTGGAGAAAGAGCTTGGTCCAGTATCTGACAGTGGTAAACCATATCGA 2460
consensus_7120#1 AGTGATGACTTTTTGGAGAAAGAGCTTGGTCCAGTATCTGACAGTGGTAAACCATATCGA 2460
************************************************************
consensus_7120#0 CAAAATGATAAAGCAGTCCGGCATCATCCTCCTACCTGTTCAGATGATGAATTTTCTGAT 2520
consensus_7120#1 CAAAATGATAAAGCAGTCCGGCATCATCCTCCTACCTGTTCAGATGATGAATTTTCTGAT 2520
************************************************************
consensus_7120#0 GATGAAAATCATGAGGTGGTCCAAGAGGCTGGGAGAGATGCAGCACAAAGTTCACTCTTC 2580
consensus_7120#1 GATGAAAATCATGAGGTGGTCCAAGAGGCTGGGAGAGATGCAGCACAAAGTTCACTCTTC 2580
************************************************************
consensus_7120#0 AAAATTATTGATTCGTGGAACACTAGTAAGACTATTTGTTCTAGCAAGAAACAGCACGGC 2640
consensus_7120#1 AAAATTATTGATTCGTGGAACACTAGTAAGACTATTTGTTCTAGCAAGAAACAGCACGGC 2640
************************************************************
consensus_7120#0 ATTGGTGGTATAGTGGACTGCTCTAGAATCAACAGAGGTAATGGTGGTGACAATTCGATC 2700
consensus_7120#1 ATTGGTGGTATAGTGGACTGCTCTAGAATCAACAGAGGTAATGGTGGTGACAATTCGATC 2700
************************************************************
consensus_7120#0 ACAGAAAATGCAGAAAAGGCTACAAGCTTATCAAAACATTCTTATATGACCTCAGATTCA 2760
consensus_7120#1 ACAGAAAATGCAGAAAAGGCTACAAGCTTATCAAAACATTCTTATATGACCTCAGATTCA 2760
************************************************************
consensus_7120#0 GATTCAGATTCAGATGAAGAGAAGTTATTCAACAGTGTCTTGGGCAGTCTGCAGAATGCA 2820
consensus_7120#1 GATTCAGATTCAGATGAAGAGAAGTTATTCAACAGTGTCTTGGGCAGTCTGCAGAATGCA 2820
************************************************************
consensus_7120#0 AAGAACTCAAGTTTGCCCGGTTGAAATGATGTATGCAGTCATACTAACCCCATGAACTCT 2880
consensus_7120#1 AAGAACTCAAGTTTGCCCGGTTGAAATGATGT---------------------------- 2852
********************************
consensus_7120#0 TCTGTAATCAATTTGGTTCCATACCATCATGTGATAATTTGATCTTTCTGCCATTCTGGG 2940
consensus_7120#1 ------------------------------------------------------------
consensus_7120#0 CTAGGTGGAGGCGTGGAGCAGCTTGAGGATGCTTTAGAAACATCTTCCCAAGCTCAGTTA 3000
consensus_7120#1 ------GGAGGCGTGGAGCAGCTTGAGGATGCTTTAGAAACATCTTCCCAAGCTCAGTTA 2906
******************************************************
consensus_7120#0 GATTTATGAAGATCACGTTACAGTAGAATGTTCTGTTTATTTTTTATTTTGTTGGAGAGG 3060
consensus_7120#1 GATTTATGAAGATCACGTTACAGTAGAATGTTCTGTTTATTTTTTATTTTGTTGGAGAGG 2966
************************************************************
consensus_7120#0 AATCCTCATATTCTTTTGAGATGCTAAGGTTTGTGCTGGTGTAGTTAATTAGTACTGGGC 3120
consensus_7120#1 AATCCTCATATTCTTTTGAGATGCTAAGGTTTGTGC------------------------ 3002
************************************
consensus_7120#0 ATCCTTAATTACCGGAAATTGGTAGGGGTACTAGGGTATAAGTCGATCTGACTTTGCCTA 3180
consensus_7120#1 ------------------------------------------------------------
consensus_7120#0 CCGTAAGATATGTGCTTCTGCAATTGTTTTTCTGTACCTAGAGAGACGAACACGTCAAAT 3240
consensus_7120#1 ------------------------------------------------------------
consensus_7120#0 GTTTGAGCTATTCTAACAAAAAAGTGAGACTCTATAGGTCAAAAAA 3286
consensus_7120#1 ----------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||