cluster # 7130

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7130 cluster # 7130 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7130#0 length = 1674 sequences # 4
consensusID : consensus_7130#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1674
fasta sequence
                              [TTTTTTTTTTTTTTTTTTCAGCCTCATCTGGACAAATAACTAAAATAAAATAAGCAGCCTACAAACAGTCTGGGGATACAAAGTACAAACCAACGATCAACTACTTGGGGTTATCAAACTATAACCTTTGTTAGCACTGCCCACAAATCGAATAGAGCAACACCACCTTTTTTGTAGGATGTGAATGGAAAAGAGCATACCTCCAAAACAACATAAATGCTAAACACTAATAAATATTTCTGGCTGAAAAAGGGTAAAAAACATATATT-CAAAAAATCTTAGATGTTGCCTCCTCGCCCAATATTCCAGGAAACCTAATTTCACATACCAAAAGAAACTGAGGGCAAATATAGTTTACTTTATGTTCATAAAAAACTGATAATGGACCTGGCAGCGGATACAATAATTTCAGCAACCACACTTCATGTGAAGCTAAACAGGACCAAGTAGCAGGAGACTGGCATATGATACCAATATCAGTACAACACATTACCAGGTTAAATAAGCAAGCAAACAGCCACACGCCGATTTCCATTCATCTGTTTTGAATGCCAGCTTTGCATCGATCTTCAACACCGCCAGAAGCAAGGACNAAGCTTGAGGGAGGCTGTG-ATTATGGAGCAGTGACCTGGACCATAATTGAAATAAATAGGTATCAGTTCTTAAAGATTAAATTGAAAAAAAGGTTAATCCACAACCGAAAAAAAAATTTGGTGTGAAATATTTTTTGCACTGTAAGATATAAATTTTAATAATTAACAATACGAAGAACTGTAGTATTGGCTGAACTGCTGTAAAAGGATATCTAGCATTCCAACCAACCTCACAAGCGAGAAACACTCTCGGTATTCTCCAGGGCAAGGGCAACTATCTTATTTGTTAGTCATTTTATTTATCTTGTGTAGAAAAGGAAGAAGTATTTGGTTGTATATGATGCAAAAGTCAAGTTCCATTCTCACTTGAAATGACACAGAATTGAACTGAAATTTAGTAGAAAGACCAAATTAGACAACTCCACACGCAACATCCACCTTGATATTAATCTGATAAGAATTTTCTTAAATGATGCTCAGAAATTTTCTTACATGACTATATTAAATAAATCATTGACATTCTAGACTGAAAAGGAAGAAAGACCTGATAAAGGAAGAAGGGTCGATGTCTGAATATAAAGAATTGCCAAATATGTTTAGCCCCTCCTAGAGTTGAAAGGTAATGGTTCATACAGATATCTCTCCCAGAACTGCAGCACTTTAAAGATAGCTCAATTGACCCCAAAGTTAGACCGGCATAAGATAGAAAAGCAGAAGCATCGATCCCATTCAACTACAGTTCATCCTTTTTATAAAGGCATTTTTATTTTTTTTATGAAACAAATACCAATCAAATCAGTGGAGCAGGTCGGGGATTGGGCTAAGACCTGAGTTACACTCAGCAAAGATACTTATCTAAAATGAAAGACTAAAATGAGAGGAACAAGATTATACTCAGAATTTCCCTTCTGGTAACAAGAAAATTGTAAGTATCTTTTCCTCACACTTTCCGATCTCCAATCAAAGCTGCCCTCTAATGAGAGAAGTTAATATCACTAAGAAAAGGATGCATAAGCTAAGGATGCATAGGCTGGGGTTCCAATGTTATACTTAAGCATTCAGCATCAAAACTATTGCAGCT]

[+] EMBL CA761464             [TTTTTTTTTTTTTTTTTTCAGCCTCATCTGGACAAATAACTAAAATAAAATAAGCAGCCTACAAACAGTCTGGGGATACAAAGTACAAACCAACGATCAACTACTTGGGGTTATCAAACTATAACCTTTGTTAGCACTGCCCACAAATCGAATAGAGCAACACCACCTTTTTTGTAGGATGTGAATGGAAAAGAGCATACCTCCAAAACAACATAAATGCTAAACACTAATAAATATTTCTGGCTGAAAAAGGGTAAAAAACATATATT CAAAAAATCTTAGATGTTGCCTCCTCGCCCAATATTCCAGGAAACCTAATTTCACATACCAAAAGAAACTGAGGGCAAATATAGTTTACTTTATGTTCATAAAAAACTGATAATGGACCTGGCAGCGGATACAATAATTTCAGCAACCACACTTCATGTGAAGCTAAACAGGACCAAGTAGCAGGAGACTGGCATATGATACCAATATCAGTACAACACATTACCAGGTTAAATAAGCAAGCAAACAGCCACACGCCGATTTCCATTCATCTGTTTTGAATGCCAGCTTTGCATCGATCTTCAACACCGCCAGAAGCAAGGACNAAGCTTGAGGGAGGCTGTG ATTATGGAGCAGTGACCTGGACCATAATTGAAATAAATAGGTATCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA761424             [TTTTTTTTTTTTTTTTTTCAGCCTCATCTGGACAAATAACTAAAATAAAATAAGCAGCCTACAAACAGTCTGGGGATACAAAGTACAAACCAACGATCAACTACTTGGGGTTATCAAACTATAACCTTTGTTAGCACTGCCCACAAATCGAATAGAGCAACACCACCTTTTTTGTAGGATGTGAATGGAAAAGAGCATACCTCCAAAACAACATAAATGCTAAACACTAATAAATATTTCTGGCTGAAAAAGGGTAAAAAACATATATT CAAAAAATCTTAGATGTTGCCTCCTCGCCCAATATTCCAGGAAACCTAATTTCACATACCAAAAGAAACTGAGGGCAAATATAGTTTACTTTATGTTCATAAAAAACTGATAATGGACCTGGCAGCGGATACAATAATTTCAGCAACCACACTTCATGTGAAGCTAAACAGGACCAAGTAGCAGGAGACTGGCATATGATACCAATATCAGTACAACACATTACCAGGTTAAATAAGCAAGCAAACAGCCACACGCCGATTTCCATTCATCTGTTTTGAATGCCAGCTTTGCATCGATCTTCAACACCGCCAGAAGCAAGGACNAAGCTTGAGGGAGGCTGTG ATTATGGAGCAGTGACCTGGACCATAATTGAAATAAATAGGTATCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB633439             [                                                                                                                                                                                                                                                         AAGGGTAAAAAACATATATTACATAAAA  GTAGATGTTGCCTCCTCGTCCAATATTCCAGGAAACCTAATTTCACATACCAAAAGAAACTGAGGCCAAATATAGTTTACTTTATGTTCATAAAAAACTGATAATGGACCTGGCAGCGGATACGATGATTTCAGCAACCACACTTCATGTGAAGCTAAACAGGACCAAGTAGCAAGAGACTGGCATATGATACCAATATCAGTACAACACATTACCAGGTTAAATAAGCAAGCAAACAGCCACACGCCGATTTCCATTCATCTGTTTTGTATGCCAGTTTTGCATCGATCTTCAACACCGCCAGAAGCAAGGACAAAGCTTGA GGAGGCTGTGAATTATGGAGCAGTGACCTGGACCATAATTGAAATAAATAGTTATCAATTCTTAAAGATTAAATTGAAAAAAAGGTTAATCCACAACCGAAAAAAAAATTTGGTGTGAAATATTTTTTGCACTGTAAGATATAAATTTTAATAATTAACAATACGAAGAACTGTAGTATTGGCTGAACTGCTGTAAAAGGATATCTAGCATTCCAACCAACCTCACAAGCGAGAAACACTCTCGGTATTCTCCAGGGCAAGGGCAACTATCTTATTTGTTAGTCATTTTATTTATCTTGTGTAGAAAAGGAAGAAGTATTTGGTTGTATATGATGCAAAAGTCAAGTTCCATTCTCACTTGAAATGACACAGAATTGAACTGAAATTTAGTAGAAAGACCAAATTAGACAACTCCACACGCAACATCCACCTTGATATTAATCTGATAAGAATTTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB633438             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATCTTATTTGTTAGTCATTTTATTTATCTTGTGTAGAAAAGGAAGAAGTATTTGGTTGTATATGATGCAAAAGTCAAGTTCCATTCTCACTTGAAATGACACAGAATTGAACTGAAATTTAGTAGAAAGACCAAATTAGACAACTCCACACGCAACATCCACCTTGATATTAATCTGATAAGAATTTTCTTAAATGATGCTCAGAAATTTTCTTACATGACTATATTAAATAAATCATTGACATTCTAGACTGAAAAGGAAGAAAGACCTGATAAAGGAAGAAGGGTCGATGTCTGAATATAAAGAATTGCCAAATATGTTTAGCCCCTCCTAGAGTTGAAAGGTAATGGTTCATACAGATATCTCTCCCAGAACTGCAGCACTTTAAAGATAGCTCAATTGACCCCAAAGTTAGACCGGCATAAGATAGAAAAGCAGAAGCATCGATCCCATTCAACTACAGTTCATCCTTTTTATAAAGGCATTTTTATTTTTTTTATGAAACAAATACCAATCAAATCAGTGGAGCAGGTCGGGGATTGGGCTAAGACCTGAGTTACACTCAGCAAAGATACTTATCTAAAATGAAAGACTAAAATGAGAGGAACAAGATTATACTCAGAATTTCCCTTCTGGTAACAAGAAAATTGTAAGTATCTTTTCCTCACACTTTCCGATCTCCAATCAAAGCTGCCCTCTAATGAGAGAAGTTAATATCACTAAGAAAAGGATGCATAAGCTAAGGATGCATAGGCTGGGGTTCCAATGTTATACTTAAGCATTCAGCATCAAAACTATTGCAGCT]




>consensus_7130#0
TTTTTTTTTTTTTTTTTTCAGCCTCATCTGGACAAATAACTAAAATAAAATAAGCAGCCT
ACAAACAGTCTGGGGATACAAAGTACAAACCAACGATCAACTACTTGGGGTTATCAAACT
ATAACCTTTGTTAGCACTGCCCACAAATCGAATAGAGCAACACCACCTTTTTTGTAGGAT
GTGAATGGAAAAGAGCATACCTCCAAAACAACATAAATGCTAAACACTAATAAATATTTC
TGGCTGAAAAAGGGTAAAAAACATATATTCAAAAAATCTTAGATGTTGCCTCCTCGCCCA
ATATTCCAGGAAACCTAATTTCACATACCAAAAGAAACTGAGGGCAAATATAGTTTACTT
TATGTTCATAAAAAACTGATAATGGACCTGGCAGCGGATACAATAATTTCAGCAACCACA
CTTCATGTGAAGCTAAACAGGACCAAGTAGCAGGAGACTGGCATATGATACCAATATCAG
TACAACACATTACCAGGTTAAATAAGCAAGCAAACAGCCACACGCCGATTTCCATTCATC
TGTTTTGAATGCCAGCTTTGCATCGATCTTCAACACCGCCAGAAGCAAGGACNAAGCTTG
AGGGAGGCTGTGATTATGGAGCAGTGACCTGGACCATAATTGAAATAAATAGGTATCAGT
TCTTAAAGATTAAATTGAAAAAAAGGTTAATCCACAACCGAAAAAAAAATTTGGTGTGAA
ATATTTTTTGCACTGTAAGATATAAATTTTAATAATTAACAATACGAAGAACTGTAGTAT
TGGCTGAACTGCTGTAAAAGGATATCTAGCATTCCAACCAACCTCACAAGCGAGAAACAC
TCTCGGTATTCTCCAGGGCAAGGGCAACTATCTTATTTGTTAGTCATTTTATTTATCTTG
TGTAGAAAAGGAAGAAGTATTTGGTTGTATATGATGCAAAAGTCAAGTTCCATTCTCACT
TGAAATGACACAGAATTGAACTGAAATTTAGTAGAAAGACCAAATTAGACAACTCCACAC
GCAACATCCACCTTGATATTAATCTGATAAGAATTTTCTTAAATGATGCTCAGAAATTTT
CTTACATGACTATATTAAATAAATCATTGACATTCTAGACTGAAAAGGAAGAAAGACCTG
ATAAAGGAAGAAGGGTCGATGTCTGAATATAAAGAATTGCCAAATATGTTTAGCCCCTCC
TAGAGTTGAAAGGTAATGGTTCATACAGATATCTCTCCCAGAACTGCAGCACTTTAAAGA
TAGCTCAATTGACCCCAAAGTTAGACCGGCATAAGATAGAAAAGCAGAAGCATCGATCCC
ATTCAACTACAGTTCATCCTTTTTATAAAGGCATTTTTATTTTTTTTATGAAACAAATAC
CAATCAAATCAGTGGAGCAGGTCGGGGATTGGGCTAAGACCTGAGTTACACTCAGCAAAG
ATACTTATCTAAAATGAAAGACTAAAATGAGAGGAACAAGATTATACTCAGAATTTCCCT
TCTGGTAACAAGAAAATTGTAAGTATCTTTTCCTCACACTTTCCGATCTCCAATCAAAGC
TGCCCTCTAATGAGAGAAGTTAATATCACTAAGAAAAGGATGCATAAGCTAAGGATGCAT
AGGCTGGGGTTCCAATGTTATACTTAAGCATTCAGCATCAAAACTATTGCAGCT
clustalw multiple alignements is not computed in this case