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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7152#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2458 fasta sequence
[ACCTGCCTCTCCCTCCTGCAAACGGAGGTGGCGCCGCGCGGCGGCGGGATCGGTCTTCCCGATCGCCGGGGGGCCAAGCCGCCAAGGGGAGTTCACCGCGCGCTTCATCCACGCGCCCAAGTAAGTTCTCGTTGTTGCTGTATCTCAGTTTGTCTCGGATTTGCCGGGAACTCTCGCACTGGGGTCATGGGGTTGGTGGTTCGTCCGTGTTCTCTCTTTTTTTTTTTGAGATATTTATATCCACTTGTCAGCACTCAGCACTGATACGGAGTAATCAAGCTGACGAGGGAAGATGCCGTTGAGACAAATCTTGGATTGCATTGAATTCATTCAGATCAAACGAAATCTCTCCTGCACCATCTCTTGCTAAGCATAGCACTGCCTTATTTCACAATTACTTCCTCTGTCCCAAAATAAGTGCAATTTTAGCACTATTCATGCTAAGTGCAGTTTTAGCACTATTTAAGTTCAACGTTTGACCATTCGTCTTATTTAAAAAAAGATTATGATTAATATTTTTATTGTTATTAGATGATAAAACATGAATAGTACTTCATGTGTGACTAATTTTTTTAATATTTTTTATATTTTTTTTCAAATAAGACGGATGGTCAAAGTGCTAAACACAAATATCTATGGTTGCACTTATTTTGGGACTTATTTTGGGACGGAGGTAGTTAGAGCTGCAAATTCTTGGCGTTTTATTTGTGGACAATGCGCTGTATCTTTACTGCGATGGAACCCTTAGCCATTTGTGCTACTCAACTTCTTCTTTTGAGCGAATTGCATGCCATTCCATCTGCTTGCAGATCACTAGTCATCTGCTGCTGTCTGCTTCCATGGTTAAGTAGGCATAGTGTTAACAAGATCAAGACGTATGATAAAGTTCAGTAAGACACCTCCTTTCATCTTCAACTCAATTAGAAAGTACTAAATTTGACTGCTCCAAGGAGATATTGATGGGTGTGTATAAACATTGCTCGTTTAAAAAATTAACATTTTGAATCTCTCATTGATAAAGAATGTACCACTCCCAGCACATATTTTACAAATTAGTGTACAGATGTTTAATTCCAACTATAAAGGAAAGGAAGAGAACAAACCACCAAAATTTACAAGACCACTACAACAAACATTTCGAACTTTTTTTTCATGTTCTACACCGATATGCACAAATTAATTCGTATATGCAAATCAATCGATCTAATTCCTAGTTTAGGACCTGTTTCCTAGTCCCTATCAATCACTATCTCTTCTGGAAGTTGAGCTTCATGATGGCAAAGCCAAACAGGAAGGCAAATAACATGGTGAATGCGACGATCACCACAGCCACGAAACCCAGCCAGCTGTGCTTAAAGTCAAAATAGTTCTCCACGAAGACATTCACGGGTATGCCATCATCCATCGGCGTCACGATATCTCCATATTGCGAGACAATCAGCCCGTATAGTGTCCATGCTACAGGGCATATCCAGCAGTACCATCTCCACCAGACTGGAGTTGCCTGAGCACACGGTCCAGGGAAAATGGAATTGAGCTATAGAAATGATGAAACAAAATTAAATGCAGGGGCCATAAGGATGGTGGTGGTTACCGGTCTGGAGATGACGAACCCGGTGAAGAGGTTCCAGATGGCATAGAAAGCCGAGGAGACGATTGAGGCGACATGGTAGCTTGGTGTTAGGCCCACAGCCATCATGCCGTAGAATGTGAAGTATAGCAGCGTGAAGAACATGAAGAAGAGGTACCAGAAGAATTTAGCCACTGTCCATTGGAACCCAATCATCGAGTACACTATGATGCTATATATGACAGACTGAACAAGTGTGTACGGGAATTCAATGGCAACCTGCAAGGGAGAAGTTGATAACTGTCAGGTTTCTCAGCAATACGATAACCAGCAGGCAAAGCAGTGTCAGGCATTGTCGAATTGATATGAGAGCTATGTACCTGCCCAAATGCATACGGGAGAGCTGAATACATCCCAGCAGCTCTTTCACGGTAAAAGACTGTCCTCTCCACTGATACCACTGGCTGAACTGACTGACCGTTTAGCACGCCAATAAACAGCACTGCAGCATACATTGACCCCATGGCGTTGAACAAGTCTTGTGACTGGCCCCTGGATCAAGAAGCCAAAGACGCGTAAATTACATTTTGAAGATGGTTTAGTCATACGCCATATATGTCTACATGGTAAGTGCATACATTTTACCACCAAGGTCCCAGAAGATGGTACCGAAGATGAGAGCTATGACAGTAGTGAAAAATAGTCTTATGGCATTGTAAGGAGGATTCCTCCAGTATGACAGGTGCTGCTTCCACAGGCATGCCAGGCATTGAATTAAGAAAGACTGTGAGTACTGTGTAGGAAAATATAGTTCACTTGAACCTGGCGGTGGTGTGCTCAGTTCCTGTATCAATGCCTTGTTCCTCCTATGAATATCAATTGCCAATG]
[+] EMBL AK103201 [ACCTGCCTCTCCCTCCTGCAAACGGAGGTGGCGCCGCGCGGCGGCGGGATCGGTCTTCCCGATCGCCGGGGGGCCAAGCCGCCAAGGGGAGTTCACCGCGCGCTTCATCCACGCGCCCAAGTAAGTTCTCGTTGTTGCTGTATCTCAGTTTGTCTCGGATTTGCCGGGAACTCTCGCACTGGGGTCATGGGGTTGGTGGTTCGTCCGTGTTCTCTCTTTTTTTTTTTGAGATATTTATATCCACTTGTCAGCACTCAGCACTGATACGGAGTAATCAAGCTGACGAGGGAAGATGCCGTTGAGACAAATCTTGGATTGCATTGAATTCATTCAGATCAAACGAAATCTCTCCTGCACCATCTCTTGCTAAGCATAGCACTGCCTTATTTCACAATTACTTCCTCTGTCCCAAAATAAGTGCAATTTTAGCACTATTCATGCTAAGTGCAGTTTTAGCACTATTTAAGTTCAACGTTTGACCATTCGTCTTATTTAAAAAAAGATTATGATTAATATTTTTATTGTTATTAGATGATAAAACATGAATAGTACTTCATGTGTGACTAATTTTTTTAATATTTTTTATATTTTTTTTCAAATAAGACGGATGGTCAAAGTGCTAAACACAAATATCTATGGTTGCACTTATTTTGGGACTTATTTTGGGACGGAGGTAGTTAGAGCTGCAAATTCTTGGCGTTTTATTTGTGGACAATGCGCTGTATCTTTACTGCGATGGAACCCTTAGCCATTTGTGCTACTCAACTTCTTCTTTTGAGCGAATTGCATGCCATTCCATCTGCTTGCAGATCACTAGTCATCTGCTGCTGTCTGCTTCCATGGTTAAGTAGGCATAGTGTTAACAAGATCAAGACGTATGATAAAGTTCAGTAAGACACCTCCTTTCATCTTCAACTCAATTAGAAAGTACTAAATTTGACTGCTCCAAGGAGATATTGATGGGTGTGTATAAACATTGCTCGTTTAAAAAATTAACATTTTGAATCTCTCATTGATAAAGAATGTACCACTCCCAGCACATATTTTACAAATTAGTGTACAGATGTTTAATTCCAACTATAAAGGAAAGGAAGAGAACAAACCACCAAAATTTACAAGACCACTACAACAAACATTTCGAACTTTTTTTTCATGTTCTACACCGATATGCACAAATTAATTCGTATATGCAAATCAATCGATCTAATTCCTAGTTTAGGACCTGTTTCCTAGTCCCTATCAATCACTATCTCTTCTGGAAGTTGAGCTTCATGATGGCAAAGCCAAACAGGAAGGCAAATAACATGGTGAATGCGACGATCACCACAGCCACGAAACCCAGCCAGCTGTGCTTAAAGTCAAAATAGTTCTCCACGAAGACATTCACGGGTATGCCATCATCCATCGGCGTCACGATATCTCCATATTGCGAGACAATCAGCCCGTATAGTGTCCATGCTACAGGGCATATCCAGCAGTACCATCTCCACCAGACTGGAGTTGCCTGAGCACACGGTCCAGGGAAAATGGAATTGAGCTATAGAAATGATGAAACAAAATTAAATGCAGGGGCCATAAGGATGGTGGTGGTTACCGGTCTGGAGATGACGAACCCGGTGAAGAGGTTCCAGATGGCATAGAAAGCCGAGGAGACGATTGAGGCGACATGGTAGCTTGGTGTTAGGCCCACAGCCATCATGCCGTAGAATGTGAAGTATAGCAGCGTGAAGAACATGAAGAAGAGGTACCAGAAGAATTTAGCCACTGTCCATTGGAACCCAATCATCGAGTACACTATGATGCTATATATGACAGACTGAACAAGTGTGTACGGGAATTCAATGGCAACCTGCAAGGGAGAAGTTGATAACTGTCAGGTTTCTCAGCAATACGATAACCAGCAGGCAAAGCAGTGTCAGGCATTGTCGAATTGATATGAGAGCTATGTACCTGCCCAAATGCATACGGGAGAGCTGAATACATCCCAGCAGCTCTTTCACGGTAAAAGACTGTCCTCTCCACTGATACCACTGGCTGAACTGACTGACCGTTTAGCACGCCAATAAACAGCACTGCAGCATACATTGACCCCATGGCGTTGAACAAGTCTTGTGACTGGCCCCTGGATCAAGAAGCCAAAGACGCGTAAATTACATTTTGAAGATGGTTTAGTCATACGCCATATATGTCTACATGGTAAGTGCATACATTTTACCACCAAGGTCCCAGAAGATGGTACCGAAGATGAGAGCTATGACAGTAGTGAAAAATAGTCTTATGGCATTGTAAGGAGGATTCCTCCAGTATGACAGGTGCTGCTTCCACAGGCATGCCAGGCATTGAATTAAGAAAGACTGTGAGTACTGTGTAGGAAAATATAGTTCACTTGAACCTGGCGGTGGTGTGCTCAGTTCCTGTATCAATGCCTTGTTCCTCCTATGAATATCAATTGCCAATG]
[+] EMBL OS0879A [ CCGGTCTGGAGATGACGAACCCGGTGAAGAGGTTCCAGATGGCATAGAAAGCCGAGGAGACGATTGAGGCGACATGGTAGCTTGGTGTTAGGCCCACAGCCATCATGCCGTAGAATGTGAAGTATAGCAGCGTGAAGAACATGAAGAAGAGGTACCAGAAGAATTTAGCCACTGTCCATTGGAACCCAATCATCGAGTACACTATGATGCTATATATGACAGACTGAACAAGTGTGTACGGGAATTCAATGGCAACCTGCAA GGAGAAGTTGATAACTGTCAGGTTTCTCAGCAATACGATAACCAGCAGGCAAAGCAGTGTCAGGCATTGTCGAATTGATATGA ]
consensusID : consensus_7152#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2270 fasta sequence
[TCCGAGTCCTAACTGGGTCTCACTAAGCGAGGTAAGTAGTGTGTTAGTGGAAATGGCGACGGCGAGGGCGAGGGCCGCGCTGGTGTTTGTGGCTCTGCTGCAGATGGCGGCAGTGGTGGTGGTGCGCGCGTCGCACGTCGTCTACCCGGAGCTCCAGTCGCTGGAGGCGAACGACGTCGACGGGAAGCTCCGGACCGGGTACCACTTCCAACCACCCAAGCACTGGATCAACGATCCGAACGGTCCGATGTACTATAAGGGCTTGTACCATCTGTTCTACCAGTACAACCCCAAGGGCGCCGTGTGGGGGAACATCGAGTGGGCGCACTCGGTTTCGACGGACCTGATCGACTGGACGGCGCTGGAGCCGGGGATCTACCCGTCCAAGACGTTCGACGAGAAGGGCTGCTGGTCGGGCTCCGCCACCGTGCTCCCCAGCGGCGTGCCGGTGATCATGTACACCGGCATCGACCCCGACGAGCGGCAGGTCCAGAACGTCGCCTACCCGGTGAACCTCTCCGACCCGTACCTCCGCGAGTGGTACAAGCCCGACTACAACCCCATCATCAACCCGGACGGCGGCATCAACGCCAGCGCGTTCCGCGACCCGACCACCGCCTGGTACGGGCCCGACGGCCACTGGCGGCTCCTCGTCGGCAGCAAGGTGAACATGAAGGGGCTCGCCGTGCTGTACCGGAGCCGGGACTTCAAGAAGTGGGTCAAGGCGCACCACCCGCTGCACTCGGCGCACACCGGGATGTGGGAGTGCCCGGACTTCTTCCCCGTCGCTGTGGCGGGCGGGAGCCGCCACTACCGCCGCGGCGTCGACACCGCCGAGCTGCACGACGCCGCCGTGGCGGAGGAGGTCAAGTACGTGCTCAAGGTGAGCCTCGACCTGACGCGGTACGAGTACTACACCGTCGGCTGGTACGACCACGCCACCGACCGGTACGTCCCCGACGCCGCCTTCCCCGACAACGACTACGGCCTCCGCTACGACTACGGCGACTTCTACGCATCCAAGTCGTTCTACGACCCGGCCAAGCGCCGCCGCATCGTCTGGGGCTGGGCCAACGAGTCCGACACCGTACCCGACGACCGCCGAAAGGGCTGGGCCGGCATCCAGGCGATACCGAGGAAGCTCTGGCTGTCGGCGGACGGGAAGCAGCTGGTGCAGTGGCCGGTGGAGGAGCTCAAGGCGCTGCGAGCCAAGCACGTCAATGTCACTGACAAGGTCATCAAGAAGGGCAACTACTTCGAGGTCACCGGCTTCAAGTCCGTGCAGTCGGATGTGGATATGGCGTTCGCGATCAAGGACCTGAGCAAGGCGGAGGAGTTCGACCCGGCGTGGCGGACGGACGCGGAGGCGCTGTGCAAGAAGCTCGGCTCGGACGTCGACGGCGGCGTGGGGCCGTTCGGGCTGTGGGCGCTGGCCTCCGGCGACCTCAAGGAGAGGACGGCCGTCTTCTTCAGGGTGTTCAAGGCCAACGACTCCTCGCACGTCGTCCTCATGTGCAACGACCCTACCAGGTCATCGTACGAGTCGAAGATCTACAGGCCGACCTTCGCCGGCTTCGTCGACGTCGACATCTCCAAGAACAAACAAATCGCCCTCCGGACATTGATCGATCACTCCGTGGTGGAGAGCTTCGGGGCGCGCGGCAAGACGTGCATCCTGACGAGGGTGTACCCGAGGAAAGCCGTCGGCGACGACGCGCACCTCTTCGTCTTCAACAACGGCGAGTCGGACGTCAAGGTCACCAACCTGGACGCCTGGGAGATGAAGACCCCGAAGATGAACGCGGAGGAGTAGCAGCAGTAGCAAGCAGCACATCAGCCTAGACATGGTGGTTGTAGCAGTACTGGTAGAGTAGCCGCCTAGCCGGGCGTTTAGCTAGCTACTCTCTCCGTCCCAAAATAAGTCCAGTTTTAACACTGTTCATGTCCAACATTTGACCGTTCGTCTTATTTGAAAAAAGATTATGATTAGTATTTTTATTGTTATTAGATGATAAAACATGAATAGTACTTTATGTGTGACTAATTTTTAAATATTTTTTATAAATTTTTCAAACAGACGGATGGTCAAAACGCTGAGTACGCATATCTATGGCTGCACTTATTTTGGGACGGAGGTAGTAGATACTAGCTTCTTTAGCTGAGATTTTGGGATAAATTTGGAGGCTGCAGTGTAGTGTTTTGATGCATTGTTAGGGAAAGAAATGGTCTGTTTTGTATCATAATTGTTGCACTCAATGCGTGAAGAAAGT]
[+] EMBL AK120779 [TCCGAGTCCTAACTGGGTCTCACTAAGCGAGGTAAGTAGTGTGTTAGTGGAAATGGCGACGGCGAGGGCGAGGGCCGCGCTGGTGTTTGTGGCTCTGCTGCAGATGGCGGCAGTGGTGGTGGTGCGCGCGTCGCACGTCGTCTACCCGGAGCTCCAGTCGCTGGAGGCGAACGACGTCGACGGGAAGCTCCGGACCGGGTACCACTTCCAACCACCCAAGCACTGGATCAACGATCCGAACGGTCCGATGTACTATAAGGGCTTGTACCATCTGTTCTACCAGTACAACCCCAAGGGCGCCGTGTGGGGGAACATCGAGTGGGCGCACTCGGTTTCGACGGACCTGATCGACTGGACGGCGCTGGAGCCGGGGATCTACCCGTCCAAGACGTTCGACGAGAAGGGCTGCTGGTCGGGCTCCGCCACCGTGCTCCCCAGCGGCGTGCCGGTGATCATGTACACCGGCATCGACCCCGACGAGCGGCAGGTCCAGAACGTCGCCTACCCGGTGAACCTCTCCGACCCGTACCTCCGCGAGTGGTACAAGCCCGACTACAACCCCATCATCAACCCGGACGGCGGCATCAACGCCAGCGCGTTCCGCGACCCGACCACCGCCTGGTACGGGCCCGACGGCCACTGGCGGCTCCTCGTCGGCAGCAAGGTGAACATGAAGGGGCTCGCCGTGCTGTACCGGAGCCGGGACTTCAAGAAGTGGGTCAAGGCGCACCACCCGCTGCACTCGGCGCACACCGGGATGTGGGAGTGCCCGGACTTCTTCCCCGTCGCTGTGGCGGGCGGGAGCCGCCACTACCGCCGCGGCGTCGACACCGCCGAGCTGCACGACGCCGCCGTGGCGGAGGAGGTCAAGTACGTGCTCAAGGTGAGCCTCGACCTGACGCGGTACGAGTACTACACCGTCGGCTGGTACGACCACGCCACCGACCGGTACGTCCCCGACGCCGCCTTCCCCGACAACGACTACGGCCTCCGCTACGACTACGGCGACTTCTACGCATCCAAGTCGTTCTACGACCCGGCCAAGCGCCGCCGCATCGTCTGGGGCTGGGCCAACGAGTCCGACACCGTACCCGACGACCGCCGAAAGGGCTGGGCCGGCATCCAGGCGATACCGAGGAAGCTCTGGCTGTCGGCGGACGGGAAGCAGCTGGTGCAGTGGCCGGTGGAGGAGCTCAAGGCGCTGCGAGCCAAGCACGTCAATGTCACTGACAAGGTCATCAAGAAGGGCAACTACTTCGAGGTCACCGGCTTCAAGTCCGTGCAGTCGGATGTGGATATGGCGTTCGCGATCAAGGACCTGAGCAAGGCGGAGGAGTTCGACCCGGCGTGGCGGACGGACGCGGAGGCGCTGTGCAAGAAGCTCGGCTCGGACGTCGACGGCGGCGTGGGGCCGTTCGGGCTGTGGGCGCTGGCCTCCGGCGACCTCAAGGAGAGGACGGCCGTCTTCTTCAGGGTGTTCAAGGCCAACGACTCCTCGCACGTCGTCCTCATGTGCAACGACCCTACCAGGTCATCGTACGAGTCGAAGATCTACAGGCCGACCTTCGCCGGCTTCGTCGACGTCGACATCTCCAAGAACAAACAAATCGCCCTCCGGACATTGATCGATCACTCCGTGGTGGAGAGCTTCGGGGCGCGCGGCAAGACGTGCATCCTGACGAGGGTGTACCCGAGGAAAGCCGTCGGCGACGACGCGCACCTCTTCGTCTTCAACAACGGCGAGTCGGACGTCAAGGTCACCAACCTGGACGCCTGGGAGATGAAGACCCCGAAGATGAACGCGGAGGAGTAGCAGCAGTAGCAAGCAGCACATCAGCCTAGACATGGTGGTTGTAGCAGTACTGGTAGAGTAGCCGCCTAGCCGGGCGTTTAGCTAGCTACTCTCTCCGTCCCAAAATAAGTCCAGTTTTAACACTGTTCATGTCCAACATTTGACCGTTCGTCTTATTTGAAAAAAGATTATGATTAGTATTTTTATTGTTATTAGATGATAAAACATGAATAGTACTTTATGTGTGACTAATTTTTAAATATTTTTTATAAATTTTTCAAACAGACGGATGGTCAAAACGCTGAGTACGCATATCTATGGCTGCACTTATTTTGGGACGGAGGTAGTAGATACTAGCTTCTTTAGCTGAGATTTTGGGATAAATTTGGAGGCTGCAGTGTAGTGTTTTGATGCATTGTTAGGGAAAGAAATGGTCTGTTTTGTATCATAATTGTTGCACTCAATGCGTGAAGAAAGT]
[+] EMBL AY342320 [ GCGAGGGCGAGGGCCGCGCTGGTGTTTGTGGCTCTGCTGCAGATGGCGGCAGTGGTGGTGGTGCGCGCGTCGCACGTCGTCTACCCGGAGCTCCAGTCGCTGGAGGCGAAGCACGTCGACGGGAAGCTCCGGACCGGGTACCACTTCCAACCACCCAAGCACTGGATCAACGATCCGAACGGTCCGATGTACTATAAGGGCTTGTACCATCTGTTCTACCAGTACAACCCCAAGGGCGCCGTGTGGGGGAACATCAAGTGGGCGCACTCGGTTTCGACGGACCTGATCGACTGGACGGCGCTGGAGCCGGGGATCTACCCGTCCAAGACGTTCGACGAGAAGGGCTGCTGGTCGGGCTCCGCCACCGTGCTCCCCAGCGGCGTGCCGGTGATCATGTACACCGGCATCGACCCCGACGAGCGGCAGGTCCAGAACGTCGCCTACCTGGTGAACCTCTCCGACCCGTACCTCCGCGAGTGGCACAAGCCCGACTACAACCCCATCGTCAACCCGGACGGCGGCATCAACGCCAGCGCGTTCCGCGACCCGACCACCGCCTGGTACGGGCCCGACGGCCACTGGCGGCTCCTCGTCGGCAGCAAGGTGAACATGAAGGGGCTCGCCGTGCTGTACCGGAGCCGGGACTTCAAGAAGTGGGTCAAGGCGCACCACCCGCTGCACTCGGCGCACACCGGGATGTGGGAGTGCCCGGACTTCTTCCCCGTCGCTGTGGCGGGCGGGAGCCGCCACTACCGCCGCGGCGTCGACACCGCCGAGCTGCACGACGCCGCCGTGGCGGAGGAGGTCAAGTACGTGCTCAAGGTGAGCCTCGACCTGACGCGGTACGAGTACTACACCGTCGGCTGGTACGACCACGCCACCGACCGGTACGTCCCCGACGCCGCCTTCCCCGACAACGACTACGGCCTCCGCTACGACTACGGCGACTTCTACGCATCCAAGTCGTTCTACGACCCGGCCAAGCGCCGCCGCATCGTCTGGGGCTGGGCCAACGAGTCCGACACCGTACCCGACGACCGCCGAAAGGGCTGGGCCGGCATCCAGGCGATACCGAGGAAGCTCTGGCTGTCGGCGGACGGGAAGCAGCTGGTGCGGTGGCCGGTGGAGGAGCTCAAGGCGCTGCGAGCCAAGCACGTCAATGTCACTGACAAGGTCATCAAGAAGGGCAACTACTTCGAGGTCACCGGCTTCAAGTCCGTGCAGTCGGATGTGGATATGGCGTTCGCGATCAAGGACCTGAGCAAGGCGGAGGAGTTCGACCCGGCGTGGCGGACGGACGCGGAGGCGCTGTGCAAGAAGCTCGGCTCGGACGTCGACGGCGGCGTGGGGCCGTTCGGGCTGTGGGCGCTGGCCTCCGGCGACCTCAAGGAGAGGACGGCCGTCTTCTTCAGGGTGTTCAAGGCCAACGACTCCTCGCACGTCGTCCTCATGTGCAACGACCCTACCAGGTCATCGTACGAGTCGAAGATCTACAGGCCGACCTTCGCCGGCTTCGTCGACGTCGACATCGCCAAGAACAAACAAATCGCCCTCCGGACATTGATCGATCACTCCGTGGTGGAGAGCTTCGGGGCGCGCGGCAAGACGTGCATCCTGACGAGGGTGTACCCGAGGAAAGCCGTCGGTGACGACGCGCACCTCTTCGTCTTCAACAACGGCGAGTCGGACGTCAAGGTCACCAACCTGGACGCCTGGGAGATGAAGACCCCGAAGATGAACGC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7152#0 ACCTGCCTCTCCCTCCTGCAAACGGAGGTGGCGCCGCGCGGCGGCGGGATCGGTCTTCCC 60
consensus_7152#1 ------------------------------------------------------------
consensus_7152#0 GATCGCCGGGGGGCCAAGCCGCCAAGGGGAGTTCACCGCGCGCTTCATCCACGCGCCCAA 120
consensus_7152#1 -------------------------------------------------------TCCGA 5
** *
consensus_7152#0 GTAAGTTCTCGTTGTTGCTGTATCTCAGTTTGTCTCGGATTTGCCGGGAACTCTCGCACT 180
consensus_7152#1 GTCCTAACTGGGTCTCACTA-AGCGAGGTAAGTAGTGTGTTAGT-GGAAATGGCGACGGC 63
** ** * * * ** * * ** ** * ** * ** ** *
consensus_7152#0 GGGGTCATGGGGTTGGTGGTTCGTCCGTGTTCTCTCTTTTTTTTTTTGAGATATTTATAT 240
consensus_7152#1 GAGGGCGAGGGCCGCGCTGGT-GTTTGTGG---CTCTGCTGCAGATGGCGGCAGTGGTGG 119
* ** * *** * * * ** *** **** * * * * * * *
consensus_7152#0 CCACTTGT-CAGCACTCAGCACTGATACGGAGTAATCAAGCTGACGAGGGAAGATGCCGT 299
consensus_7152#1 TGGTGCGCGCGTCGCACGTCGTCTACCCGGAGC--TCCAGTCGCTGGAGGCGAACGACGT 177
* * * * * * * ***** ** ** * * ** * * ***
consensus_7152#0 TGA-GACAAATCTTGGATTGCATTGAATTCATTCAGATCAAACGAAATCTCTCCTGCACC 358
consensus_7152#1 CGACGGGAAGCTCCGGACCGGGT---ACCACTTCCAACCACCCAAG-----CACTGGATC 229
** * ** *** * * * *** * ** * * *** * *
consensus_7152#0 ATCTCTTGCTAAGCATAGCACTGCCTTATTTCACAATTACTTCCTCTGTCCCAAAATAAG 418
consensus_7152#1 AACGAT--CCGAACGGTCCGATGTACTATAA-GGGCTTGTACCATCTGTTCTA---CCAG 283
* * * * * * * ** *** ** * ***** * * **
consensus_7152#0 TGCAATTTTA---GCACTATTCATGCTAAGTGCAGTTTTAGCACTATTTAAGTTCAACGT 475
consensus_7152#1 TACAACCCCAAGGGCGCCGTGTGGGG-GAACATCGAGTGGGCGC-ACTCGGTTTCGACG- 340
* *** * ** * * * * * * ** * * * *** ***
consensus_7152#0 TTGACCATTCGTCTTATTTAAAA-AAAGATTATGATTAATATTTTTATTGTTATTAGATG 534
consensus_7152#1 -GACCTGATCGACTGGACGGCGCTGGAGCCGGGGATCTACCCGTCCAA-GACGTTCGACG 398
* *** ** ** *** * * * * ** ** *
consensus_7152#0 ATAAAACATGAATAGTACTTCATGTGTGACTAATTTTTTTAATATTTTTTATATTTTTTT 594
consensus_7152#1 AGAAGGGCTGC-TGGT-CGGGCTCCGCCACCGTGCTCCCCAGCGGC----GTGCCGGTGA 452
* ** ** * ** * * * ** * * * *
consensus_7152#0 TCAAATAAGACGGATGGTCAAAGTGCTAAACACAAATATCTATGGTTGCACTTATTTTGG 654
consensus_7152#1 TCATGTAC-ACCGGCATCGACCCCGACGAGCG-GCAGGTCCAGAACGTCGCCTACCCGGT 510
*** ** ** * * * * * * ** * * * ** *
consensus_7152#0 GACTTATTTTGGGACGGAGGTAGTTAGAGCTGCAAATTCTTGGCGTTTTATTTGTGGACA 714
consensus_7152#1 GAACCTCTCCGACCCGTACCTC-CGCGAGTGGTACAAGCCCGACTACAACCCCATCATCA 569
** * * ** * * *** * * * * * * * **
consensus_7152#0 ATGCGCTGTATCTTTACTGCGATGGAACCCTTAGCCATTTGTGCTACTCAACTTCTTCTT 774
consensus_7152#1 ACCCG---------GACGGCGGCATCAACGCCAGCGCGTTCCGCGACCCGACCACCGCCT 620
* ** ** *** * * *** ** ** ** * ** * * *
consensus_7152#0 TTGAGCGAATTGCATGCCATTC-CATCTGCTTGCAGATCACTAGTCATCTGCTGCTGTCT 833
consensus_7152#1 GGTACGGGCCCGACGGCCACTGGCGGCTCCTCGTCGGCAGCAAGGTGAACA-TGAAGGGG 679
* * * **** * * ** ** * * * ** ** *
consensus_7152#0 GCTTCCATGGTTAAGTAGGCATAGTGTTAACAAGATCAAGACGTATGATAAAGTTCAGTA 893
consensus_7152#1 CTCGCCGTGCTGTACCGGAGCCGGGACT-------TCAAGAAGTGGGTCAAGGCGCA-CC 731
** ** * * * * * ****** ** * ** * **
consensus_7152#0 AGACACCTCCTTTCATCTTCAACTCAATTAGAAAGTACTAAATTTGACTGCTCCAAGGAG 953
consensus_7152#1 ACCCGCTGCACTCGGCGCACACCGGGATGTGGGAGTGC----CCGGACTTCTTCCCCGTC 787
* * * * * ** * ** * *** * **** ** * *
consensus_7152#0 ATATTGATGGGTGTGTATAAACATTGCTCGTTTAAAAAATTAACATT-TTGAATCTCTCA 1012
consensus_7152#1 GCTGTGGCGGGCGGGAGCCGCCACTACC--GCCGCGGCGTCGACACCGCCGAGCTGCACG 845
** *** * * ** * * * *** ** * *
consensus_7152#0 TTGATAAAG-AATGTACCACTCCCAGCACATATTTTACAAATTAGTGTACAGATGTTTAA 1071
consensus_7152#1 ACGCCGCCGTGGCGGAGGAGGTCAAGTACGTGCTCAA--GGTGAGCCTCGACCTGACGCG 903
* * * * * * ** ** * * * * ** * * **
consensus_7152#0 TTCCAACTATAAAGGAAAGGAAGAGAACAAAC-CACCAAAATTTACAAGACCACTACAAC 1130
consensus_7152#1 GTACGAGTACTACACCGTCGGCTGGTACGACCACGCCACCGACCGGTACGTCCCCGACGC 963
* * * ** * * * ** * * * *** * * * *
consensus_7152#0 AAACATTTCGAACTTTTTTTTCATGTTCTACACCGATATGCACAAATTAATTCGTATATG 1190
consensus_7152#1 CGCCTTCCCCGACAACGACTACGGCCTCCGCTACGAC-TACGGCGACT------TCTACG 1016
* * * ** * * ** * *** * * * * * ** *
consensus_7152#0 CAAATCAATCGATCTAATTCCTAGTTTAGGACCTGTTTCCTAGTCCCTATCAATCACTAT 1250
consensus_7152#1 CATCCAAGTCGTTCTACGACCCGGCCAAGCGCC-GCCGCATCGTCTGGGGCTGGGCCAAC 1075
** * *** **** ** * ** ** * * * *** * * *
consensus_7152#0 CTCTTCTGGAAGTTGAGCTTCATGATGGC----AAAGCCAAACAGGAAGGCAAATAACAT 1306
consensus_7152#1 GAGTCC--GACACCGTACCCGACGACCGCCGAAAGGGCTGGGCCGGCATCCAGGCGATAC 1133
* * ** * * * ** ** * ** * ** * ** * *
consensus_7152#0 GGTGAATGCGACGATCACCACAGCCACGAAACCCAGCCAGCTGTGCTTAAAGTCAAAATA 1366
consensus_7152#1 CGAGGAAGCTCTGGCTGTCGGCGG-ACGGGAAGCAGCTGG-TGCAGTGGCCGGTGGAGGA 1191
* * * ** * * * *** * **** * ** * * * *
consensus_7152#0 GTTCTCCACG----AAGACATTCACGGGTATGCCATCATCCATCGGCGTCACGATATCTC 1422
consensus_7152#1 GCTCAAGGCGCTGCGAGCCAAGCACGTCAATGTCACTGACAAG-GTCATCAAGAAGGGCA 1250
* ** ** ** ** **** *** ** * * * * *** **
consensus_7152#0 CATATTGCGAGACAATCAGCCCGTATAGTGTCCATGCTACAGGGCATAT-----CCAGCA 1477
consensus_7152#1 ACTACTTCGAGGTCACCGGCTTCAAGTCCGTGCAGTCGGATGTGGATATGGCGTTCGCGA 1310
** * **** * * ** * ** ** * * * **** * *
consensus_7152#0 GTACCATCTCCACCAGACTGGAGTTGCCTGAGCACACGGTCCAGG-GAAAATGGAATTGA 1536
consensus_7152#1 TCAAGGACCTGAGCAAGGCGGAGGAGTTCGACCCGGCGTGGCGGACGGACGCGGAGGCGC 1370
* * * ** **** * ** * ** * * * * *** *
consensus_7152#0 GCTATAGAAATGATGAAACAAA-ATTAAATGCAG----GGGCCATAAGGATGGTGGTGGT 1591
consensus_7152#1 TGTGCAAGAAGCTCGGCTCGGACGTCGACGGCGGCGTGGGGCCGTTCGGGCTGTGGGCGC 1430
* * ** * * * * * ** * ***** * ** **** *
consensus_7152#0 TACCGGTCTG-GAGATGACGAACCCGGTGAAGAGGTTCCAGATGGCATAGAAAGCCGAGG 1650
consensus_7152#1 TGGCCTCCGGCGACCTCAAGGAGAGGACGGCCGTCTTCTTCAGGGTGTTCAAGGCCAACG 1490
* * * * ** * * * * * * *** * ** * ** *** * *
consensus_7152#0 AGACGATTGAGGCGACATGGTAGCTTGGTGTTAGGCCCACAG-CCATCATGC----CGTA 1705
consensus_7152#1 ACTC--CTCGCACGTCGTCCTCATGTGCAACGACCCTACCAGGTCATCGTACGAGTCGAA 1548
* * * ** * * * ** * * *** **** * * ** *
consensus_7152#0 GAATGTGAAGTATAGCAGCGTGAAGAACATGAAGAAGAGGTACCAGAAGAATTTAGCCAC 1765
consensus_7152#1 GATCTACAGGCCGACCTTCGCCGGCTTCGTCGACGTCGACATCTCCAAGAACAAACAAAT 1608
** * * * * ** * * * * ***** * *
consensus_7152#0 TGTCCATTGGAACCCAATCATCGAGTACACTATGATGCTATATATGACAGACTGAACAAG 1825
consensus_7152#1 CGCCCTCCGGA---CATTGATCGATCACTCCGTGGTGGAGAGCTTCGGGGCGCGCGGCAA 1665
* ** *** ** * ***** ** * ** ** * * * *
consensus_7152#0 TGTGTACGGGAATTCAATGGCAACCTGCAAGGGAGAAGTTGATAACTGTCAGGTTTCTCA 1885
consensus_7152#1 GACGTGCATCCTGACGAGGGTGTACCCGAGGAAAGCCGTCGGCGAC-GACGCGCACCTCT 1724
** * * * ** * * * ** ** * ** * * * ***
consensus_7152#0 GCAATACGATAACCAGCAGGCAAAGCAGTGTCAGGCATTGTCGAATTGATATGAGAGCTA 1945
consensus_7152#1 TCGTCTTCAACAACGGCGAGTCGGAC-GTCAAGGTCACCAACCTGGACGCCTGGGAGATG 1783
* * * * ** * * ** * ** * ** *** *
consensus_7152#0 TGTACCTGCCCAAATGCATACGGGAGAGCTG-AATACATCCCAGCAGCTCTTTCACGGTA 2004
consensus_7152#1 AAGACCC-CGAAGATGAACGCGGAGGAGTAGCAGCAGTAGCAAGCAGCACATCAGCCTAG 1842
*** * * *** * *** *** * * * * ****** * * *
consensus_7152#0 AAA-GACTGTCCTCTC--CACTGATACCACTGGCTGAACTGACTGACCGTTTAGCACGCC 2061
consensus_7152#1 ACATGGTGGTTGTAGCAGTACTGGTAG-AGTAGCCGC-CTAGCCGGGCGTTTAGCTAGCT 1900
* * * ** * * **** ** * * ** * ** * * ******** **
consensus_7152#0 AATAAACAGCACTGCAGCATACATTGACCCCATGGCGTTGAACAAGTCTTGTGACTGGCC 2121
consensus_7152#1 ACTCT-CTCCGTCCCAAAATAAGTCCAGTTT-TAACACTGTTCATGTCCAACATTTGACC 1958
* * * * ** *** * * * * ** ** *** ** **
consensus_7152#0 CCTGGATCAAGAAGCCAAAGACGCGTAAATTACATTTTGAAGATGGTTTAGTCATACGCC 2181
consensus_7152#1 GTTCGTCTTATTTGAAAAAAGATTATGATTAGTATTTTTATTGTTATTAGATGATAAAAC 2018
* * * * *** * * * ***** * * ** * *** *
consensus_7152#0 ATATATGTCTACATGGTAAGTGCATACATTTTACCACCAAGGTCCCAGAAGATGGTACCG 2241
consensus_7152#1 ATGAATAG-TACTTTATGTGTGACTAATTTTTA-----AATATTTTTTATAAATTTTTCA 2072
** ** *** * * *** ** ***** ** * * * * *
consensus_7152#0 AAGATGAGAGCTATGACAGTAGTGAAAA-ATAGTCTTATGGCATTGTAAGGAGGATTCCT 2300
consensus_7152#1 AACAGACGGATGGTCAAAACGCTGAGTACGCATATCTATGGC--TGCA---------CTT 2121
** * * * * * *** * * ****** ** * * *
consensus_7152#0 CCAGTATGACAGGTGCTGCTTCCACAGGCATGCCAGGCATTGAATTAAGAAAGACTGTGA 2360
consensus_7152#1 ATTTTGGGACGGAGGTAGTAGATACTAGCTTCTTTAGCTGAGATTTTGGGATAAATTTGG 2181
* *** * * * ** ** * ** ** ** * * * * **
consensus_7152#0 GTACTGTGTAGGAAAATATAGTTCACTTGAACCTGGCGGTGGTGTGCTCAGTTCCTGTAT 2420
consensus_7152#1 AGGCTGCAGTGTAGTGTTTTGATGCATTG--TTAGGGAAAGAAATGGTCTGTTT-TGTAT 2238
*** * * * * * * *** ** * ** ** *** *****
consensus_7152#0 CAATGCCTTGTTCCTCCTATGAATATCAATTGCCAATG 2458
consensus_7152#1 CA-TAATTGTTGCACTCAATGCGTGAAGAAAGT----- 2270
** * * * * * *** * * *
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||