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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7173 cluster # 7173       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7173#0 length = 992 sequences # 4  

consensusID : consensus_7173#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 992
fasta sequence
                              [ATCATTATATTAAGACATTACAAGCCTCAGAATATGAGAAAGAAACTNAGGCAATGGACAACAAGTGTGTTCTTTACCTTTGCCATCATATTCCAATATGTGAAAAGATAAATGTTACATGTAACAATCGTGCTACAGTTCAATGACACAGCTACACCTGCAAACTGTGATTTGCTCATTTGTCGAAAAATCATCTTTACAACAACTCTACGGAACCAGCCTCGTAGTAGTACCCGT-GGAAGCACAATCAAAGAGGTTATACCAAACAC-TCGCAAGCAGCACCANCC-AAGTTTCGTCAGAATTTCAGATAGAGAGGCGTTCATCAATATTTCATATTT-CCATTCAAGGCTCATCCCATTGTCTGTATTTCCAGGGTGGCGTGACGGTCGGAGCGGAGGAGCCGCTGTCTGTCCTCTCGCGGATCTCCCTGTACTCTTGACATATAGCACACAGGTGACAGAATAAGTGCGTTGTTAAATCGCCACATGGTGCTTCCGGAAGATTGTATTTTGCTCTTAGTGCTTGTCGATATCCACAAGCATAACAAGCAACAGCAGATCCTGGAACTGCCAATACAAGGCCCCCAGTAAACACACAGCAGAGACTTGTGAGAAGGCCCCAAAGCATGCAATGTGTAGTGCATGATCCAGCAAGAGTTCCAGATCCCAAGAACTGTGCATTCCTTCCAAAAAGGAAGCAAGGACAA-TTGCACCAATAAAACCTTTTATCTTTCCTTCTGAAATCAAGGAGTCACAGGTCAGAGAGTAGCATACAGCTCTGTGGATCATCAAAACAAGCACAGATGCCTGAAGACCATTGTGTAGGATCCCGGGTTAACTTGTGGCGCGCGGCATCATTCTCCTCCGCAGAAACGCGATCCTCCTCAGTATCCAGGCCATATAATGGAATGTACTGAGGCGGAACGTAGCTCCCTTTTCCGGCCATCTCTTCGATTCGATTCGAACAAAGCCAAGACGGAGGCCGGCGCGGTG]

[+] EMBL C27917               [ATCATTATATTAAGACATTACAAGCCTCAGAATATGAGAAAGAAACTNAGGCAATGGACAACAAGTGTGTTCTTTACCTTTGCCATCATATTCCAATATGTGAAAAGATAAATGTTACATGTAACAATCGTGCTACAGTTCAATGACACAGCTACACCTGCAAACTGTGATTTGCTCATTTGTCGAAAAATCATCTTTACAACAACTCTACGGAACCAGCCTCGTAGTAGTACCCGTGGGAAGCACAATCAAAGAGGTTATACCAAACACTTCGCAAGCAGCACCANCC AAGTTTCGTCANGATTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C28061               [ TCATTATATTAAGACATTACAAGCCTCAGAATATGAGAAAGAAACTGAGGCAATGGACAACAAGTGTGTTCTTTACCTTTGCCATCATATTCCAATATGTGAAAAGATAAATGTTACATGTAACAATCGTGCTACAGTTCAATGACACAGCTACACCTGCAAACTGTGATTTGCTCATTTGTCGAAAAATCATCTTTACAACAACTCTACGGAACCAGCCTCGTAGTAGTACCCGT GGAAGCACAATCAAAGAAGATATAACAAACAC TCGCAAGCAGCAACANCCAAAGATTCGTCAGAA TTCAGATAGAGAGGCGTTCATCAATATTTCATATTT CCATTCAAGGCTCATCCCATTGTCTGTATTTCCAGGGTGGCGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU082078             [                                                                                                                                                                                                                                                                                                             GAATTTCAGATAGAGAGGCGTTCATCAATATTTCATATTTCCCATTCAAGGCTCAT CCATTGTCTGTA TTGCA GGTGGCGTGACGGTCGGAGCGGAGGAGCCGCTGTCTGTCCTCTCGCGGATCTCCCTGTACTCTTGACATATAGCACACAGGTGACAGAATAAGTGCGTTGTTAAATCGCCACATGGTGCTTCCGGAAGATTGTATTTTGCTCTTAGTGCTTGTCGATATCCACAAGCATAACAAGCAACAGCAGATCCTGGAACTGCCAATACAAGGCCCCCAGTAAACACACAGCAGAGACTTGTGAGAAGGCCCCAAAGCATGCAATGTGTAGTGCATGATCCAGCAAGAGTTCCAGATCCCAAGAACTGTGCATTCCTTCCAAAAAGGAAGCAAGGACAA TTGCACCAATAAAACCTTTTATCTTTCCTTCTGAAATCAAGGAGTCACAGGTCAGAGAGTAGCATACAGCTCTGTGGATCATCAAAACAAGCACAGATGCCTGAAGACCATTGTGTAGGATCCCGGGTTAACTTGTGGCGCGCGGCATCATTCTCCTCCGCAGAAACGCGATCCTCCTCAGTATCCAGGCCATATAATGGAATGTACTGAGGCGGAACGTAGCTCCCTTTTCCGGCCATCTCTTCGATTCGATTCGAACAAAGCCAAGACGGAGGCCGGCGCGGTG]
[+] EMBL AU082079             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACAAGTTGCACCAATAAACCCTTTTATCTTTCCTTCTGAAATCAAGGAGTCACAGGTCAGAGAGTAGCATACAGCTCTGTGGATCATCAAAACAAGCACAGATGCCTGAAGACCATTGTGTAGGATCCCGGGTTAACTTGTGGCGCGCGGCATCATTCTCCTCCGCAGAAACGCGATCCTCCTCAGTATCCAGGCCATATAATGGAATGTACTGAGGCGGAACGTAGCTCCCTTTTCCGGCCATCTCTTCGATTCGATTCGAACAAAGCCAAGACGGAGGCCGGCGCGGTG]


>consensus_7173#0 ATCATTATATTAAGACATTACAAGCCTCAGAATATGAGAAAGAAACTNAGGCAATGGACA ACAAGTGTGTTCTTTACCTTTGCCATCATATTCCAATATGTGAAAAGATAAATGTTACAT GTAACAATCGTGCTACAGTTCAATGACACAGCTACACCTGCAAACTGTGATTTGCTCATT TGTCGAAAAATCATCTTTACAACAACTCTACGGAACCAGCCTCGTAGTAGTACCCGTGGA AGCACAATCAAAGAGGTTATACCAAACACTCGCAAGCAGCACCANCCAAGTTTCGTCAGA ATTTCAGATAGAGAGGCGTTCATCAATATTTCATATTTCCATTCAAGGCTCATCCCATTG TCTGTATTTCCAGGGTGGCGTGACGGTCGGAGCGGAGGAGCCGCTGTCTGTCCTCTCGCG GATCTCCCTGTACTCTTGACATATAGCACACAGGTGACAGAATAAGTGCGTTGTTAAATC GCCACATGGTGCTTCCGGAAGATTGTATTTTGCTCTTAGTGCTTGTCGATATCCACAAGC ATAACAAGCAACAGCAGATCCTGGAACTGCCAATACAAGGCCCCCAGTAAACACACAGCA GAGACTTGTGAGAAGGCCCCAAAGCATGCAATGTGTAGTGCATGATCCAGCAAGAGTTCC AGATCCCAAGAACTGTGCATTCCTTCCAAAAAGGAAGCAAGGACAATTGCACCAATAAAA CCTTTTATCTTTCCTTCTGAAATCAAGGAGTCACAGGTCAGAGAGTAGCATACAGCTCTG TGGATCATCAAAACAAGCACAGATGCCTGAAGACCATTGTGTAGGATCCCGGGTTAACTT GTGGCGCGCGGCATCATTCTCCTCCGCAGAAACGCGATCCTCCTCAGTATCCAGGCCATA TAATGGAATGTACTGAGGCGGAACGTAGCTCCCTTTTCCGGCCATCTCTTCGATTCGATT CGAACAAAGCCAAGACGGAGGCCGGCGCGGTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)