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Oryza sativa
cluster # 7208 cluster # 7208       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7208#0 length = 1782 sequences # 4  

consensusID : consensus_7208#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1782
fasta sequence
                              [TTTCTCTCTCGATTGATTCCACGCGAGTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTCGCCCCCCACTTGTTCATGGATTCCAACCACATGATCCATATGACGTCGTCGTCTTCCTAGTTCCTCCTCGTGTTAATTTTTCCATGCAATTTTAGCTGTCTTTATCAAAGCTAATTTGAGCTCTCTCTCTCTCTCTCTCTCTCTCTATTCTATTTGTTTCCTTGCTCTGCTCTCTGAATTTCTTCTCTTCTTCCTTCTACCTTCTTAATTTGCCTCTCTGAATCATACCATCTCGTTTCTACTCCATGAACAGCTTTAGCATCTTGTCACTGCTCACTGGGATTAAAAGTGTCTCCAATTAGTAGAGTTCTTGGTCTTTTTTTTCGGATGCTACTCTCCAAAGATTTGGTTCTTGGTGTTTTTAATCAGCAAGGAGGCCTCCTCTCAGGTTTAATTTGCTAGCCCATCAGATATGGGGTGCTTCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAGATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCATGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGATATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAAAACTTTCAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACACACGTCTCCACCGCGGTGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCAAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCG-CTGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGCGGCCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGACGTCAGATCAGTCACCGGAGGAGGCTGCGGTCAACGACGGTCAACCAGTGCGTGAGGAACAAATTGTGGAGAGATCGATCATTGATTCATTTGTATTGTAGAGAGAGATGATGATCAATGCGAATAATTTGGAGCATCCCAAGTGTTTCGATTGCCACCAAAAAAA]

[+] EMBL AK105337             [TTTCTCTCTCGATTGATTCCACGCGAGTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTCGCCCCCCACTTGTTCATGGATTCCAACCACATGATCCATATGACGTCGTCGTCTTCCTAGTTCCTCCTCGTGTTAATTTTTCCATGCAATTTTAGCTGTCTTTATCAAAGCTAATTTGAGCTCTCTCTCTCTCTCTCTCTCTCTCTATTCTATTTGTTTCCTTGCTCTGCTCTCTGAATTTCTTCTCTTCTTCCTTCTACCTTCTTAATTTGCCTCTCTGAATCATACCATCTCGTTTCTACTCCATGAACAGCTTTAGCATCTTGTCACTGCTCACTGGGATTAAAAGTGTCTCCAATTAGTAGAGTTCTTGGTCTTTTTTTTCGGATGCTACTCTCCAAAGATTTGGTTCTTGGTGTTTTTAATCAGCAAGGAGGCCTCCTCTCAGGTTTAATTTGCTAGCCCATCAGATATGGGGTGCTTCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAGATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCATGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGATATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAAAACTTTCAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACACACGTCTCCACCGCGGTGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCAAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCG CTGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGCGGCCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGACGTCAGATCAGTCACCGGAGGAGGCTGCGGTCAACGACGGTCAACCAGTGCGTGAGGAACAAATTGTGGAGAGATCGATCATTGATTCATTTGTATTGTAGAGAGAGATGATGATCAATGCGAATAATT                                     ]
[+] EMBL AK071975             [                                                                         ATGGATTCCAACCACATGATCCATATGACGTCGTCGTCTTCCTAGTTCCTCCTCGTGTTAATTTTTCCATGCAATTTTAGCTGTCTTTATCAAAGCTAATTTGAGCTCTCTCTCTCTCTCTCTCTCTCTCTATTCTATTTGTTTCCTTGCTCTGCTCTCTGAATTTCTTCTCTTCTTCCTTCTACCTTCTTAATTTGCCTCTCTGAATCATACCATCTCGTTTCTACTCCATGAACAGCTTTAGCATCTTGTCACTGCTCACTGGGATTAAAAGTGTCTCCAATTAGTAGAGTTCTTGGTCTTTTTTTTCGGATGCTACTCTCCAAAGATTTGGTTCTTGGTGTTTTTAATCAGCAAGGAGGCCTCCTCTCAGGTTTAATTTGCTAGCCCATCAGATATGGGGTGCTTCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAGATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCATGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGATATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAGAACTTTCAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACAAACGTCTCCACCGCGGTGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCAAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCG CTGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGCGGCCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGACGTCAGATCAGTCACCGGAGGAGGCTGCGGTCAACGACGGTCAACCAGTGCGTGAGGAACAAATTGTGGAGAGATCGATCATTGATTCATTTGTATTGTAGAGAGAGATGATGATCAATGCGAAT                                         ]
[+] EMBL AU172707             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BI805704             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTGGT GGGACCCCCGGGT   CCGCGCCGGACTACNTCGAGTCGGGCCACCTGACGACCCAGAGCGAC TGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGAC GGGC GCGGTCGCCTGGA CGGA CCGGCC GCGGAGGA CAGAA CT CTGGGGTGGGTGC CCCCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCC CGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCCAGGAGCGGCCGGCGATGAGGGAGGTCTTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCCCCGCCT CCCCCGGCGAAGAGGTGACGTCAGATCAGTCACCGGAGGAGGCT CGGTCAACGACGGTCAACCCGTGCGTGAGGAACCAATTGTGGAGAGATCGATCCTTGATTTATTTGTATTGTAGAGAGAGATGATGATC ATGCGAATAATTTGGAGCATCCCAAGTGTTTCGATTGCCACCAAAAAAA]


>consensus_7208#0 TTTCTCTCTCGATTGATTCCACGCGAGTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTCGC CCCCCACTTGTTCATGGATTCCAACCACATGATCCATATGACGTCGTCGTCTTCCTAGTT CCTCCTCGTGTTAATTTTTCCATGCAATTTTAGCTGTCTTTATCAAAGCTAATTTGAGCT CTCTCTCTCTCTCTCTCTCTCTCTATTCTATTTGTTTCCTTGCTCTGCTCTCTGAATTTC TTCTCTTCTTCCTTCTACCTTCTTAATTTGCCTCTCTGAATCATACCATCTCGTTTCTAC TCCATGAACAGCTTTAGCATCTTGTCACTGCTCACTGGGATTAAAAGTGTCTCCAATTAG TAGAGTTCTTGGTCTTTTTTTTCGGATGCTACTCTCCAAAGATTTGGTTCTTGGTGTTTT TAATCAGCAAGGAGGCCTCCTCTCAGGTTTAATTTGCTAGCCCATCAGATATGGGGTGCT TCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGG CGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCA TCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGC TCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCT CCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCG CCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCC AATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGG ATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAG ATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCA TGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGA TATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAAAACTTT CAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACACACGTCTCCACCGCGG TGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCA AGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCGC TGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGC CGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGG CGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGC GGCCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGA CGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGACGTC AGATCAGTCACCGGAGGAGGCTGCGGTCAACGACGGTCAACCAGTGCGTGAGGAACAAAT TGTGGAGAGATCGATCATTGATTCATTTGTATTGTAGAGAGAGATGATGATCAATGCGAA TAATTTGGAGCATCCCAAGTGTTTCGATTGCCACCAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)