These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7208#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1782 fasta sequence [TTTCTCTCTCGATTGATTCCACGCGAGTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTCGCCCCCCACTTGTTCATGGATTCCAACCACATGATCCATATGACGTCGTCGTCTTCCTAGTTCCTCCTCGTGTTAATTTTTCCATGCAATTTTAGCTGTCTTTATCAAAGCTAATTTGAGCTCTCTCTCTCTCTCTCTCTCTCTCTATTCTATTTGTTTCCTTGCTCTGCTCTCTGAATTTCTTCTCTTCTTCCTTCTACCTTCTTAATTTGCCTCTCTGAATCATACCATCTCGTTTCTACTCCATGAACAGCTTTAGCATCTTGTCACTGCTCACTGGGATTAAAAGTGTCTCCAATTAGTAGAGTTCTTGGTCTTTTTTTTCGGATGCTACTCTCCAAAGATTTGGTTCTTGGTGTTTTTAATCAGCAAGGAGGCCTCCTCTCAGGTTTAATTTGCTAGCCCATCAGATATGGGGTGCTTCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAGATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCATGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGATATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAAAACTTTCAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACACACGTCTCCACCGCGGTGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCAAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCG-CTGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGCGGCCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGACGTCAGATCAGTCACCGGAGGAGGCTGCGGTCAACGACGGTCAACCAGTGCGTGAGGAACAAATTGTGGAGAGATCGATCATTGATTCATTTGTATTGTAGAGAGAGATGATGATCAATGCGAATAATTTGGAGCATCCCAAGTGTTTCGATTGCCACCAAAAAAA] [+] EMBL AK105337 [TTTCTCTCTCGATTGATTCCACGCGAGTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTCGCCCCCCACTTGTTCATGGATTCCAACCACATGATCCATATGACGTCGTCGTCTTCCTAGTTCCTCCTCGTGTTAATTTTTCCATGCAATTTTAGCTGTCTTTATCAAAGCTAATTTGAGCTCTCTCTCTCTCTCTCTCTCTCTCTATTCTATTTGTTTCCTTGCTCTGCTCTCTGAATTTCTTCTCTTCTTCCTTCTACCTTCTTAATTTGCCTCTCTGAATCATACCATCTCGTTTCTACTCCATGAACAGCTTTAGCATCTTGTCACTGCTCACTGGGATTAAAAGTGTCTCCAATTAGTAGAGTTCTTGGTCTTTTTTTTCGGATGCTACTCTCCAAAGATTTGGTTCTTGGTGTTTTTAATCAGCAAGGAGGCCTCCTCTCAGGTTTAATTTGCTAGCCCATCAGATATGGGGTGCTTCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAGATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCATGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGATATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAAAACTTTCAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACACACGTCTCCACCGCGGTGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCAAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCG CTGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGCGGCCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGACGTCAGATCAGTCACCGGAGGAGGCTGCGGTCAACGACGGTCAACCAGTGCGTGAGGAACAAATTGTGGAGAGATCGATCATTGATTCATTTGTATTGTAGAGAGAGATGATGATCAATGCGAATAATT ] [+] EMBL AK071975 [ ATGGATTCCAACCACATGATCCATATGACGTCGTCGTCTTCCTAGTTCCTCCTCGTGTTAATTTTTCCATGCAATTTTAGCTGTCTTTATCAAAGCTAATTTGAGCTCTCTCTCTCTCTCTCTCTCTCTCTATTCTATTTGTTTCCTTGCTCTGCTCTCTGAATTTCTTCTCTTCTTCCTTCTACCTTCTTAATTTGCCTCTCTGAATCATACCATCTCGTTTCTACTCCATGAACAGCTTTAGCATCTTGTCACTGCTCACTGGGATTAAAAGTGTCTCCAATTAGTAGAGTTCTTGGTCTTTTTTTTCGGATGCTACTCTCCAAAGATTTGGTTCTTGGTGTTTTTAATCAGCAAGGAGGCCTCCTCTCAGGTTTAATTTGCTAGCCCATCAGATATGGGGTGCTTCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAGATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCATGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGATATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAGAACTTTCAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACAAACGTCTCCACCGCGGTGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCAAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCG CTGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGCGGCCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGACGTCAGATCAGTCACCGGAGGAGGCTGCGGTCAACGACGGTCAACCAGTGCGTGAGGAACAAATTGTGGAGAGATCGATCATTGATTCATTTGTATTGTAGAGAGAGATGATGATCAATGCGAAT ] [+] EMBL AU172707 [ AGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCAT ] [+] EMBL BI805704 [ GTGGT GGGACCCCCGGGT CCGCGCCGGACTACNTCGAGTCGGGCCACCTGACGACCCAGAGCGAC TGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGAC GGGC GCGGTCGCCTGGA CGGA CCGGCC GCGGAGGA CAGAA CT CTGGGGTGGGTGC CCCCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCC CGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCCAGGAGCGGCCGGCGATGAGGGAGGTCTTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCCCCGCCT CCCCCGGCGAAGAGGTGACGTCAGATCAGTCACCGGAGGAGGCT CGGTCAACGACGGTCAACCCGTGCGTGAGGAACCAATTGTGGAGAGATCGATCCTTGATTTATTTGTATTGTAGAGAGAGATGATGATC ATGCGAATAATTTGGAGCATCCCAAGTGTTTCGATTGCCACCAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||