These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7343#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1085 fasta sequence [AGACGACGCAGCATCAGCAACACACACACACACCGAGCAATCAATCCATCACACACAAACACAAACAAACGCACAGGGCGCGAGAGCTCGAACGAGAGGAGGAAAGGTCGGCAATGGGGAGGGCGCCGTGCTGCGAGAAGATGGGGCTGAAGAGGGGGCCGTGGACGGCGGAGGAGGACAGGATCCTGGTGGCGCACATCGAGCGGCACGGGCACAGCAACTGGCGCGCGCTGCCGAGGCAGGCCGGCCTTCTCCGCTGCGGCAAGAGCTGCCGCCTCCGGTGGATCAACTACCTCCGCCCCGACATCAAGCGCGGCAACTTCACCCGCGAGGAGGAGGACGCCATCATCCACCTCCACGACCTTCTCGGCAACCGATGGTCCGCGATTGCAGCGAGGCTGCCGGGGAGGACGGACAACGAGATCAAGAATGTGTGGCACACTCACCTCAAGAAGCGGCTGGAGCCGAAGCCGTCGTCCGGCCGGGAAGCCGCC-GCGCCCAAGCGAAAGGCGACCAAGAAGGCTGCGGCGGTGGCGGTGGCGATCGACGTTCCGACCACCGTGCCGGTGTCGCCGGAGCAGTCGCTCTCGACCACGACGACGTCGGCCGCCACCACCGAGGAGTACTCGTACTCGATGGCCTCCTCCGCGGATCACAACACCACGGACAGTTTCACCTCGGAGGAGGAGTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGGCAATGACGGTGGACAGCACCGACTCCGGGATGGAGATGAGCGGCGGCGATCCTCTCGGCGCGGGCGGTGCCTCGCCGTCGTCGAGCAACGACGACGACATGGACGACTTCTGGCTCAAGCTGTTCATCCAGGCCGGTGGCATGCAGAATTTGCCCCAGATTTAATTTAGGCAGAGAATTGGCCTCTTGGGTCGATCTCTTGTTCATTTTTCTTACCACCACTATTCTTTGAATCTTTGGAGCTGTGTAAATCTTTACAAAGCGGAGAGATTGATGGGAAACGAAAGAAGGCAATATTATCTTTCAAAAAAAAAAAACCCAAAAAAAAAAAAAAAAAAAAAAAAAGGCTTGTACCTCGGC] [+] EMBL AK112056 [AGACGACGCAGCATCAGCAACACACACACACACCGAGCAATCAATCCATCACACACAAACACAAACAAACGCACAGGGCGCGAGAGCTCGAACGAGAGGAGGAAAGGTCGGCAATGGGGAGGGCGCCGTGCTGCGAGAAGATGGGGCTGAAGAGGGGGCCGTGGACGGCGGAGGAGGACAGGATCCTGGTGGCGCACATCGAGCGGCACGGGCACAGCAACTGGCGCGCGCTGCCGAGGCAGGCCGGCCTTCTCCGCTGCGGCAAGAGCTGCCGCCTCCGGTGGATCAACTACCTCCGCCCCGACATCAAGCGCGGCAACTTCACCCGCGAGGAGGAGGACGCCATCATCCACCTCCACGACCTTCTCGGCAACCGATGGTCCGCGATTGCAGCGAGGCTGCCGGGGAGGACGGACAACGAGATCAAGAATGTGTGGCACACTCACCTCAAGAAGCGGCTGGAGCCGAAGCCGTCGTCCGGCCGGGAAGCCGCC GCGCCCAAGCGAAAGGCGACCAAGAAGGCTGCGGCGGTGGCGGTGGCGATCGACGTTCCGACCACCGTGCCGGTGTCGCCGGAGCAGTCGCTCTCGACCACGACGACGTCGGCCGCCACCACCGAGGAGTACTCGTACTCGATGGCCTCCTCCGCGGATCACAACACCACGGACAGTTTCACCTCGGAGGAGGAGTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGGCAATGACGGTGGACAGCACCGACTCCGGGATGGAGATGAGCGGCGGCGATCCTCTCGGCGCGGGCGGTGCCTCGCCGTCGTCGAGCAACGACGACGACATGGACGACTTCTGGCTCAAGCTGTTCATCCAGGCCGGTGGCATGCAGAATTTGCCCCAGATTTAATTTAGGCAGAGAATTGGCCTCTTGGGTCGATCTCTTGTTCATTTTTCTTACCACCACTATTCTTTGAATCTTTGGAGCTGTGTAAATCTTTACAAAGCGGAGAGATTGATGGGAAACGAAAGAAGGCAA ] [+] EMBL AU082155 [ ACACACACACCGAGCAATCAATCCATCACACACAAACACAAACAAACGCACAGGGCGCGAGAGCTCGAACGAGAGGAGGAAAGGTCGGCAATGGGGAGGGCGCCGTGCTGCGAGAAGATGGGGCTGAAGAGGGGGCCGTGGACGGCGGAGGAGGACAGGATCCTGGTGGCGCACATCGAGCGGCACGGGCACAGCAACTGGCGCGCGCTGCCGAGGCAGGCCGGCCTTCTCCGCTGCGGCAAGAGCTGCCGCCTCCGGTGGATCAACTACCTCCG CCCGACATCAAGCGCGGCAACTTCACCCGCGAGGAGGAGGACGCCATCATCCACCTCCACGACCTTCTCGGCAACCGATGGTCCGCGATTGCAGCGAGGCTGCCGGGGAGGACGGACAACGAGATCAAGAATGTGTGGCACACTCACCTCAAGAAGCGGCTGGAGCCGAAGCCGTCGTCCGGCCGGGAAGCCGTC GCGCCCAAGCGAAAGGCGACCAAGAAGGCTGCGGCGGTGGCGGTGGCG ] [+] EMBL AU082156 [ TCCANGACCTTTTCGNCAACCGATGGTCCGCGATTGCAGC AGGCTNCCGGGAAGG CGG CACCGAGNTCAAGAATGTGTGGCACACTCACCTCAAGAAGCGGCTGAAGCCGAAGCCGTCGTCCGGCCGGNAAGCCGCCGGCGCCCAAGCGAAAGGCGACCAAGAAGGCTGCGCCGGTGCCGGTGGCGATCGACGTTCCGACCACCGTGCCGGTGTCGCCGGAGCAGTCGCTCTCGACCACGACGACGTCGGCCGCCACCACCGAGGAGTACTCGTACTCGATGGCCTCCTCCGCGGATCACAACACCACGGACAGTTTCACCTCGGAGGAGGAGTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGGCAATGACGGTGGACAGCACCGACTCCGGGATGGAGATGAGCGGCGGCGATCCTCTCGGCGCGGGCGGTGCCTCGCCGTCGTCGAGCAACGACGACGACATGGACGACTTCTGGCTCAAGCTGTTCATCCAGGCCGGTGGCATGCAGAATTTGCCCCAGATTTAATTTAGGCAGAGAATTGGCCTCTTGGGTCGATCTCTTGTTCATTTTTCTTACCACCACTATTCTTTGAATCTTTGGAGCTGTGTAAATCTTTACAAAGCGGAGAGATTGATGGGAAACGAAAGAAGGCAATATTATCTTTCAAAAAAAA ] [+] EMBL AW070140 [ GAATTTGCCCCAGATTTAATTTAGGCAGAGAATTGGTCTCTTGGGTCGATCTCTTGTTCATTTTTCTTACCACCACTATTCTTTGAATCTTTGGAGCTGTGTAAATCTTTACAAAGCGGAGAGATTGATGGGAAACGAAAGAAGGCAATATTATCTTTAAAAAAAAAAAAACCCAAAAAAAAAAAAAAAAAAAAAAAAAGGCTTGTACCTCGGC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||