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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7345#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3397 fasta sequence
[TAGATCGTACCCGAGTTCGTCCACCGCCATCGCCATTGGTGCCGTCCGCCCATCCCCATGCTCGGCCGTCATCCCCAACTGCCACAAGCTCTATTAGTGAAGCAATTCTATTGGTCATCCACAAGCTCAGCCTCACTGAGAGCTCGTCCGACATAGCGCACTAGTCGCGTGGTCCACACGGTGGCGGCGATCCTGCGCGGCGATAGCTGAGTTCCTCCGACATGTGCACCAGGAACCGTCCCCTCTTATGTGGCAGGACCACGGGTGTGCGACGAGGTTGGCTGACCGGAGCTGGAGGTGACGACGAGGAATGGCGAGGGACGGAGGACGCGGCAACTGATGGATAGACGGTGCTGCTTCGGATGGACGGAGTGGCGTGAAATGAAGAAATTAGCTCTTGTGATGGTGGATTCTGAAAGACATGCGAATTGGATGGTTAATCCTGAACGTGCTACGAATCGGATGGAATATTCTGAAATTTCTCGTCTGCATGTCCCCAACCCTAGGTCGCCGTTTCCACACACGAGATCGAGCGGCTCGCCATCTCTGCCGCCGCCTCGCTCGCTCGCTCGCCGTCCTCCGCCGCTGCCTTGCTCGTCGTCCTCCGCCGCCGCGGCGCCGGCACGCCTCGTCTATCCCCTCTCTCGGCTCAGTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGTTCCGCAAGGAGGACATATCAAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCCTATCATCGTCAACACAGTTATTGGCTACAAAACGAAAGTTAGCAGCATCGAATCCTCCAACAGCAAAGCGAAGACGATCACCTATTGCATTGCCAATAGTCAGGTCTCCAGGAGTGCGACAAATTATTTCCCAAAATGAAGTCATCATGGAGAGATCACAAGTTGCTGGTCAGATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGATCTATGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTGCTATCCCAATTGAGCTGGATGTTGAAACTCAGCCAAGGGAGTCAACTCAATCAACACCTCATGTTGTGACTCATCGTTCTGGGAAAAGAACACTCAAATCTTTAATCTGGAAAGAATTTAAACCATTTTATTCTTCTACTGGAAAGGTGCTCTATGGGAAATGCATTCATTGCAGTAAGGTAATTAAAGCTAACCGTGGTTCGGGGACAAGTCAATGCCATAGACATTTACTTAAGTGTCCACTGAGAATTAGAGTGCAACAATTGGTTGAAAGTTTGCATTCCAGTCTATCTCCTAATGCATCTGTTCTAAAGGACTGGAAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGCTTGTTTTGCAAGAACTTCCTTTCAGTTTTGTTGAACACCCTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTACTTTAGGGTGCTTTCCAGAATTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAAAAGTTAGCTTTGTTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGGCGGCTGACATGTGGTCATCTAATCAAAACCTAGGTTACATGTGTATAACTTGTCACTTCATTGACAATGAATGGAATATTCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCCACATGATAGTATAGCTCTCTTCAATGAAATTCTAAAGTGTATTCAGGATTGGCAGATAGAAAGTAAGTTGTTCAGTATTACAGTAGACAATGCATCTGTTAATGATTCTATGGTTGTGGAATTGAAAGGAAATCTCTTGGGTAAGCTTGCCATGCCTTGCAAAGGGGAGCTATTTCATTTCCGGTGCGCAGCTCACATCCTTAATCTTATTGTTCAAGATGGATTGAGTACTATCAGTGGTGCCATATCTAGGATAAGGGAAAGTGTAAAGTATATAAAAGCATCAGAAGCATGTGAGCAAAAATTTGAAGAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTGTCCACTCGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGATTCATTGGATCGGTTTGATCCAAACTTTCAAGATGCTCCACTATTTTTTGATTGGGACAATGCAGAAGTTCTTTGCAAACATCTCAAGATCTTCTATGATGCAACTGTTGTGGTTTCCGGGACATCATATCCCACTGTTTCTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGCTTCTAAATGAGTCCAACAGTGAGGATGTTCTTGTCGCTAGCATGGTTTCTAAAATGGATACAAAATTTCAGAAATATTGGGATCTGCAGTTCCTGCAGATTTGTGTTCCTGTTATTTTTTATCCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCAACTGGTCCAAATGGATATCTGTCTAGAATTAAGAGGATAGTCCGCAGTTGGTTTGTTGAATATTCTTCACAAATTGGTGGTCCAAGCGCAATCAATTCTCAAGAAGCATCAACTAGTGGAGTGAATGTTGGTGGCAGCCAATTTGCTGACTGGAGGCAATATCTTCATGATCAAAGCAAGAGTAAAGAAAGACTGAGTTAACTAGCTATCTCGAAGATATTCCTCAAGAAAATGATTTCCCTGATGATGATTTTGACATACTCCAGTGGTGGAGGGTAAACTCATGCAAATATCCAATATTATCACGCATGGCGCTTGATTTGCTTGCTGTCCCTGCATCTTCAGTTGCATCAGATTCTGCATTTTCTACTGGATCTAGAATCATTAGTGACTATAGGAGTAGGCTGGCTAATGGAACTGTGGTGGCATTGGTTTGCCTTCAAGATTAGATGCGAGCAGATGGTTTTGGTGATCCCTATTCAATTCTAACTGATACGGTTGAGGACGATGATGTTAATATGCAACTATTAGGAAGTAATGCAGGAGCGTGCTCTGGTGGTGGGGGCAAAACTCAATGAAATTTTCCTTTCTGGAATGTTATATTCTAACTGCAAGGGATGAGATGGCCTTCAGCAGCTGCGAATGCTGCTACCACTAGTTTTGTTCCCTGTAGTTTTTATTTCAGTAACTTAGTTCGTTTAGATGCACTAGCCGTTGTCATTTTTGTGCATGTCCAGAGCCTGCTGAAAATAGTATGATGTATTGGAAATTCAGTTGAGCCTGGGATTTCTGGACTTTTTGTTCTGCCGTTTTGCTGCTGCTGCTACCGTTCTGGCCTCCTGCTGCTGGGCTAGTGCTGCTGCTGGTTGAAATCCTCACTGTGAGAAGGACATCAATTTTTGGTTGTATTTTGCAGTGTTGATATGAATTGTTCAGATACAAGCCT]
[+] EMBL AK068849 [TAGATCGTACCCGAGTTCGTCCACCGCCATCGCCATTGGTGCCGTCCGCCCATCCCCATGCTCGGCCGTCATCCCCAACTGCCACAAGCTCTATTAGTGAAGCAATTCTATTGGTCATCCACAAGCTCAGCCTCACTGAGAGCTCGTCCGACATAGCGCACTAGTCGCGTGGTCCACACGGTGGCGGCGATCCTGCGCGGCGATAGCTGAGTTCCTCCGACATGTGCACCAGGAACCGTCCCCTCTTATGTGGCAGGACCACGGGTGTGCGACGAGGTTGGCTGACCGGAGCTGGAGGTGACGACGAGGAATGGCGAGGGACGGAGGACGCGGCAACTGATGGATAGACGGTGCTGCTTCGGATGGACGGAGTGGCGTGAAATGAAGAAATTAGCTCTTGTGATGGTGGATTCTGAAAGACATGCGAATTGGATGGTTAATCCTGAACGTGCTACGAATCGGATGGAATATTCTGAAATTTCTCGTCTGCATGTCCCCAACCCTAGGTCGCCGTTTCCACACACGAGATCGAGCGGCTCGCCATCTCTGCCGCCGCCTCGCTCGCTCGCTCGCCGTCCTCCGCCGCTGCCTTGCTCGTCGTCCTCCGCCGCCGCGGCGCCGGCACGCCTCGTCTATCCCCTCTCTCGGCTCAGTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGTTCCGCAAGGAGGACATATCAAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCCTATCATCGTCAACACAGTTATTGGCTACAAAACGAAAGTTAGCAGCATCGAATCCTCCAACAGCAAAGCGAAGACGATCACCTATTGCATTGCCAATAGTCAGGTCTCCAGGAGTGCGACAAATTATTTCCCAAAATGAAGTCATCATGGAGAGATCACAAGTTGCTGGTCAGATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGATCTATGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTGCTATCCCAATTGAGCTGGATGTTGAAACTCAGCCAAGGGAGTCAACTCAATCAACACCTCATGTTGTGACTCATCGTTCTGGGAAAAGAACACTCAAATCTTTAATCTGGAAAGAATTTAAACCATTTTATTCTTCTACTGGAAAGGTGCTCTATGGGAAATGCATTCATTGCAGTAAGGTAATTAAAGCTAACCGTGGTTCGGGGACAAGTCAATGCCATAGACATTTACTTAAGTGTCCACTGAGAATTAGAGTGCAACAATTGGTTGAAAGTTTGCATTCCAGTCTATCTCCTAATGCATCTGTTCTAAAGGACTGGAAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGCTTGTTTTGCAAGAACTTCCTTTCAGTTTTGTTGAACACCCTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTACTTTAGGGTGCTTTCCAGAATTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAAAAGTTAGCTTTGTTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGGCGGCTGACATGTGGTCATCTAATCAAAACCTAGGTTACATGTGTATAACTTGTCACTTCATTGACAATGAATGGAATATTCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCCACATGATAGTATAGCTCTCTTCAATGAAATTCTAAAGTGTATTCAGGATTGGCAGATAGAAAGTAAGTTGTTCAGTATTACAGTAGACAATGCATCTGTTAATGATTCTATGGTTGTGGAATTGAAAGGAAATCTCTTGGGTAAGCTTGCCATGCCTTGCAAAGGGGAGCTATTTCATTTCCGGTGCGCAGCTCACATCCTTAATCTTATTGTTCAAGATGGATTGAGTACTATCAGTGGTGCCATATCTAGGATAAGGGAAAGTGTAAAGTATATAAAAGCATCAGAAGCATGTGAGCAAAAATTTGAAGAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTGTCCACTCGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGATTCATTGGATCGGTTTGATCCAAACTTTCAAGATGCTCCACTATTTTTTGATTGGGACAATGCAGAAGTTCTTTGCAAACATCTCAAGATCTTCTATGATGCAACTGTTGTGGTTTCCGGGACATCATATCCCACTGTTTCTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGCTTCTAAATGAGTCCAACAGTGAGGATGTTCTTGTCGCTAGCATGGTTTCTAAAATGGATACAAAATTTCAGAAATATTGGGATCTGCAGTTCCTGCAGATTTGTGTTCCTGTTATTTTTTATCCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCAACTGGTCCAAATGGATATCTGTCTAGAATTAAGAGGATAGTCCGCAGTTGGTTTGTTGAATATTCTTCACAAATTGGTGGTCCAAGCGCAATCAATTCTCAAGAAGCATCAACTAGTGGAGTGAATGTTGGTGGCAGCCAATTTGCTGACTGGAGGCAATATCTTCATGATCAAAGCAAGAGTAAAGAAAGACTGAGTTAACTAGCTATCTCGAAGATATTCCTCAAGAAAATGATTTCCCTGATGATGATTTTGACATACTCCAGTGGTGGAGGGTAAACTCATGCAAATATCCAATATTATCACGCATGGCGCTTGATTTGCTTGCTGTCCCTGCATCTTCAGTTGCATCAGATTCTGCATTTTCTACTGGATCTAGAATCATTAGTGACTATAGGAGTAGGCTGGCTAATGGAACTGTGGTGGCATTGGTTTGCCTTCAAGATTAGATGCGAGCAGATGGTTTTGGTGATCCCTATTCAATTCTAACTGATACGGTTGAGGACGATGATGTTAATATGCAACTATTAGGAAGTAATGCAGGAGCGTGCTCTGGTGGTGGGGGCAAAACTCAATGAAATTTTCCTTTCTGGAATGTTATATTCTAACTGCAAGGGATGAGATGGCCTTCAGCAGCTGCGAATGCTGCTACCACTAGTTTTGTTCCCTGTAGTTTTTATTTCAGTAACTTAGTTCGTTTAGATGCACTAGCCGTTGTCATTTTTGTGCATGTCCAGAGCCTGCTGAAAATAGTATGATGTATTGGAAATTCAGTTGAGCCTGGGATTTCTGGACTTTTTGTTCTGCCGTTTTGCTGCTGCTGCTACCGTTCTGGCCTCCTGCTGCTGGGCTAGTGCTGCTGCTGGTTGAAATCCTCACTGTGAGAAGGACATCAATTTTTGGTTGTATTTTGCAGTGTTGATATGAATTGTTCAGATACAAGCCT]
consensusID : consensus_7345#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2852 fasta sequence
[ATCGAGCCTGGAGCGGCTCGCCATCTCTGCCGCCGGTCCGCCGCCTCGCTCGCTCGCTCGCCGTCCGCCGCCTCGCTCGCTCGCTCGCCGTCCGCCGCCGCCGCCTTGCTCAGTTGCTCGTCGTCCTCCGCCGCCGCGGCGCCAGCACGCCTCGTCCTTCCCCTCTCTCGGCTCAGTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGCTTCGCAAGGAGGATATATCAAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCTTATCATCATCAACACAATTGTTGTCTGCAAAACGAAAGTTAGCAGCATCGAATCCTTCGACAGCGAAGCGAAGACGATCACCTATTGTATTGCCAATAGTCAGGTCTCCAGGAGTGCGCCAAATTATTTCTCAAAATGCTCTCATCATGGAGAGATCACAAGTTCCTGGTCATATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGATCTCTGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTACTATCCTTGAGCTGGATGTTGAAAATCAGCCAAGGGAATCAAGTCAACCAACACCTCATGTTGTGACTCATCGTTCTGGTTAGCACCTAATACATTTGTTCTAAAGGACTGGAAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGATTGTTTTGCAAGAACTTCCTTCCAGCTTTGTTGAACACCTTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTACTTTAGGGTGGTTTCTAGAACTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAAAAGTTAGCTTTGCTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGACGGCTGACATGTGGTCATCTAATCAAAACCTAGGTTACATGTGCATAACTTGTCACTTCATTGACAATGAATGGAATATGCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCCCACATGATAGTATAGCTCTCTTCAATGAAATTATAAAGTGCATTCAAGATTGGCAGATAGAAAGTAAGTTGTTCAGTATTACAGTAGACAATGCATCTACTAATGATTCTATGGTTGTGGAATTGAAAGGAAATCTCTTGGGTAAACTTGCTATGCCTTGCAAAGGAGAGCTATTTCATTTCTGGTGCGCAGCTCACATCTTTAATCCTATTGTTCAAGATGGATTGAGTACTATCAGTGCTGCCATATCCAGGATAAGGGAAAGTGTGAAGTATGTAAGAGCATCAGAAGCACGGGAGCAAAAATTTGAAGAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTCTCCACTCGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGATTCATTGGATCGGTTTGATCCTAACTTTAAAGATGCTCCACAATTTTTCGATTGGGAGAATGCAGAAGTTCTTTGCAAACATCTCAAGGTCTTCTATGATGCAACTGTTGTGGTTTCCGGGACATCATATCCCACTGTTACTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGATTCTAAATGAGTCCAACAATGAGGATGATCTTGTTGCTAGCTTGGTTTCTAAAATGGATACAAAATTTCAGAAATATTGGGATCTACAGTTCCTGCAGATTTGGGTTCCTGTTATTTTTGATCCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCAACTGGTCCAAATGGATATCTCCCTAGAATTAAGAGGACAGTCCGTACTTGGTTTGCTGAATATTCTTCACAAATTTGTGGTCCAAGCACAACCAATTCTCAAGAAGCATCAACTAGTGGGGTGAATGTTGGTGGCAGCCAATTTGCTGACTAGAGGCAATATCTTCATGATCAAAGCAAGAGTAAAGTAAAGACTGAGTTAACTAGATATCTCGAAGATATTCCTCAAGAAAATGATTTCCCTGATGATGATTTTGACATACTCTAGTGGTGGAGGGTGAACTCTTGCAAATATCCAATATCATCACGCATGGCACTTGATTTGCTTGCTGTCCCTGCATCCTCAGTTGCATCAGAGTCTGCATTTTCTACTGGATAAAGAATCATTAGCGACTATAGGAGTAGGTTGGCTAGTGGAACTGTGGAGGCATTGGTTTGCCTTCAAGATTGGATGCGAGCCGATGGTTTTGGTGATCCATATTCAATTCAAACTGATACGGCTGAGGGCGATGATGTTAATATGCAACTATTGGGACATTAAATCATTTGACATCTCAGGCAAATTACCATGTGAGTTCTATGCAATCTGGGTTCTGAGAAATTTTGCTAGTTCTGGAGCAGTGGTAAGTGGAGCTTGCTTTGTTTCCCAGCTCATAT-CAGTGTTTCCCA-CACATGTCAGATTACATCCAAAATTTGTACGATGTATTGGAAATTTAGTTGAGCCTGGGATTTCTGGACTTCTTTTCTGCCGTTGAGCCTGAAATTCATATTTGATTTTGCCTGGTGAATTCTGCATGAGTGACAGGAATAGATGCAAGGATTAGGCGGCTTTGTTGCTGTCAGGATATGCATGTCTTTTGAGTCCCTTTTTTTTTTCCCC-TTTATGCTGTTGTTAAGCTATGAATATTTTGGAAGGGGATTTTTTTAGAACAATTTGATTAAGGATCGGTGGATTTTTATGCCAAATTGTAGACTCTGCTTTTCGCTGCAGTCACTGTCTTTCAGAAGATTTCAGGGCCCAAGATGGTTNCTAATATTTACTGATTTTCTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK101882 [ATCGAGCCTGGAGCGGCTCGCCATCTCTGCCGCCGGTCCGCCGCCTCGCTCGCTCGCTCGCCGTCCGCCGCCTCGCTCGCTCGCTCGCCGTCCGCCGCCGCCGCCTTGCTCAGTTGCTCGTCGTCCTCCGCCGCCGCGGCGCCAGCACGCCTCGTCCTTCCCCTCTCTCGGCTCAGTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGCTTCGCAAGGAGGATATATCAAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCTTATCATCATCAACACAATTGTTGTCTGCAAAACGAAAGTTAGCAGCATCGAATCCTTCGACAGCGAAGCGAAGACGATCACCTATTGTATTGCCAATAGTCAGGTCTCCAGGAGTGCGCCAAATTATTTCTCAAAATGCTCTCATCATGGAGAGATCACAAGTTCCTGGTCATATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGATCTCTGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTACTATCCTTGAGCTGGATGTTGAAAATCAGCCAAGGGAATCAAGTCAACCAACACCTCATGTTGTGACTCATCGTTCTGGTTAGCACCTAATACATTTGTTCTAAAGGACTGGAAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGATTGTTTTGCAAGAACTTCCTTCCAGCTTTGTTGAACACCTTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTACTTTAGGGTGGTTTCTAGAACTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAAAAGTTAGCTTTGCTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGACGGCTGACATGTGGTCATCTAATCAAAACCTAGGTTACATGTGCATAACTTGTCACTTCATTGACAATGAATGGAATATGCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCCCACATGATAGTATAGCTCTCTTCAATGAAATTATAAAGTGCATTCAAGATTGGCAGATAGAAAGTAAGTTGTTCAGTATTACAGTAGACAATGCATCTACTAATGATTCTATGGTTGTGGAATTGAAAGGAAATCTCTTGGGTAAACTTGCTATGCCTTGCAAAGGAGAGCTATTTCATTTCTGGTGCGCAGCTCACATCTTTAATCCTATTGTTCAAGATGGATTGAGTACTATCAGTGCTGCCATATCCAGGATAAGGGAAAGTGTGAAGTATGTAAGAGCATCAGAAGCACGGGAGCAAAAATTTGAAGAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTCTCCACTCGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGATTCATTGGATCGGTTTGATCCTAACTTTAAAGATGCTCCACAATTTTTCGATTGGGAGAATGCAGAAGTTCTTTGCAAACATCTCAAGGTCTTCTATGATGCAACTGTTGTGGTTTCCGGGACATCATATCCCACTGTTACTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGATTCTAAATGAGTCCAACAATGAGGATGATCTTGTTGCTAGCTTGGTTTCTAAAATGGATACAAAATTTCAGAAATATTGGGATCTACAGTTCCTGCAGATTTGGGTTCCTGTTATTTTTGATCCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCAACTGGTCCAAATGGATATCTCCCTAGAATTAAGAGGACAGTCCGTACTTGGTTTGCTGAATATTCTTCACAAATTTGTGGTCCAAGCACAACCAATTCTCAAGAAGCATCAACTAGTGGGGTGAATGTTGGTGGCAGCCAATTTGCTGACTAGAGGCAATATCTTCATGATCAAAGCAAGAGTAAAGTAAAGACTGAGTTAACTAGATATCTCGAAGATATTCCTCAAGAAAATGATTTCCCTGATGATGATTTTGACATACTCTAGTGGTGGAGGGTGAACTCTTGCAAATATCCAATATCATCACGCATGGCACTTGATTTGCTTGCTGTCCCTGCATCCTCAGTTGCATCAGAGTCTGCATTTTCTACTGGATAAAGAATCATTAGCGACTATAGGAGTAGGTTGGCTAGTGGAACTGTGGAGGCATTGGTTTGCCTTCAAGATTGGATGCGAGCCGATGGTTTTGGTGATCCATATTCAATTCAAACTGATACGGCTGAGGGCGATGATGTTAATATGCAACTATTGGGACATTAAATCATTTGACATCTCAGGCAAATTACCATGTGAGTTCTATGCAATCTGGGTTCTGAGAAATTTTGCTAGTTCTGGAGCAGTGGTAAGTGGAGCTTGCTTTGTTTCCCAGCTCATAT CAGTGTTTCCCA CGCATGTCAGATTACATCCAAAATTTGTACGATGTATTGGAAATTTAGTTGAGCCTGGGATTTCTGGACTTCTTTTCTGCCGTTGAGCCTGAAATTCATATTTGATTTTGCCTGGTGAATTCTGCATGAGTGACAGGAATAGATGCAAGGATTAGGCGGCTTTGTTGCTGTCAGGATATGCATGTCTTTTGAGT CCGTTTTTTTTTCCCC TTTATGCTGTTGTTAAGCTATGAATATTTTGGAAGGGGATTTTTTTAGAACAATTTGATTAAGGATCGGTGGATTTTTATGCCAAATTGTAGACTCTGCTTTTCGCTGCAGTCAC ]
[+] EMBL C73679 [ GCAACTATTGGGACATTAAATCATTTGACATCTCAGGCAAATTACCATGTGAGTTCTATGCAATCTGGGTTCTGAGAAATTTTGCTAGTTCTGGAGCAGTGGTAAGTGGAGCTTGCTTTGTTTCCCAGCTCATAT CAGTGTTTCCCA CACATGTCAGATTACATCCAAAATTTGTACGATGTATTGGAAATTTAGTTGAGCCTGGGATTTCTGGACTTCTTTTCTGCCGTTGAGCCTGAAATTCATATTTGATTTTGCCTGGTGAATTCTGCATGAGTGACAGGAATAGATGCAAGGATTAGGCGGCTTTGTTGCTGTCAGGATATGCATGTCTTTTGAGTCCCTTTTTTTTTTCCCCTTTTATGCTGTTGTTAAGCTATGAATATTTTGGAAGGGGA TTTTTTAGACCAATTTGATTAAGGACCGGTGGA TTTTATGCC ]
[+] EMBL AU091918 [ CAGCTCATATCCAGTGTTCCCCACCACATGTCAGATTACATCCAAAATTTGTACGATGTATTGGAAATTTAGTTGAGCCTGGGATTTCTGGACTTCTTTTCTGCCGTTGAGCCTGAAATTCATATTTGATTTTGCCTGGTGAATTCTGCATGAGTGACAGGAATAGATGCAAGGATTAGGCGGCTTTGTTGCTGTCAGGATATGCATGTCTTTTGAGTCCCTTTTTTTTTTCCCC TTTATGCTGTTGTTAAGCTATGAATATTTTGGAAGGGGATTTTTTTAGAACAATTTGATTAAGGATCGGTGGATTTTTATGCCAAATTGTAGACTCTGCTTTTCGCTGCAGTCACTGTCTTTCAGAAGATTTCAGGGCCCAAGATGGTTNCTAATATTTACTGATTTTCTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7345#0 TAGATCGTACCCGAGTTCGTCCACCGCCATCGCCATTGGTGCCGTCCGCCCATCCCCATG 60
consensus_7345#1 ------------------------------------------------------------
consensus_7345#0 CTCGGCCGTCATCCCCAACTGCCACAAGCTCTATTAGTGAAGCAATTCTATTGGTCATCC 120
consensus_7345#1 ------------------------------------------------------------
consensus_7345#0 ACAAGCTCAGCCTCACTGAGAGCTCGTCCGACATAGCGCACTAGTCGCGTGGTCCACACG 180
consensus_7345#1 ------------------------------------------------------------
consensus_7345#0 GTGGCGGCGATCCTGCGCGGCGATAGCTGAGTTCCTCCGACATGTGCACCAGGAACCGTC 240
consensus_7345#1 ------------------------------------------------------------
consensus_7345#0 CCCTCTTATGTGGCAGGACCACGGGTGTGCGACGAGGTTGGCTGACCGGAGCTGGAGGTG 300
consensus_7345#1 ------------------------------------------------------------
consensus_7345#0 ACGACGAGGAATGGCGAGGGACGGAGGACGCGGCAACTGATGGATAGACGGTGCTGCTTC 360
consensus_7345#1 ------------------------------------------------------------
consensus_7345#0 GGATGGACGGAGTGGCGTGAAATGAAGAAATTAGCTCTTGTGATGGTGGATTCTGAAAGA 420
consensus_7345#1 ------------------------------------------------------------
consensus_7345#0 CATGCGAATTGGATGGTTAATCCTGAACGTGCTACGAATCGGATGGAATATTCTGAAATT 480
consensus_7345#1 ------------------------------------------ATCGAGC---CTGGAGCG 15
** ** *** *
consensus_7345#0 TCTCGTCTGCATGTCCCCAACCCTAGGTCGCCGTTTCCACACACGAGATCGAGCGGCTCG 540
consensus_7345#1 GCTCGCC-----ATCTCTGCCGCCGGTCCGCCGCCTC---------GCTCGCTCG-CTCG 60
**** * ** * * * * ***** ** * *** ** ****
consensus_7345#0 CCATCTCTGCCGCCGCCTCGCTCGCTCGCTCGCCGTCCTCCGCCGCTGCCTTGCTC---- 596
consensus_7345#1 CCGT-----CCGCCGCCTCGCTCGCTCGCTCGCCGTCCGCCGCCGCCGCCTTGCTCAGTT 115
** * ***************************** ******* *********
consensus_7345#0 ----GTCGTCCTCCGCCGCCGCGGCGCCGGCACGCCTCGTCTATCCCCTCTCTCGGCTCA 652
consensus_7345#1 GCTCGTCGTCCTCCGCCGCCGCGGCGCCAGCACGCCTCGTCCTTCCCCTCTCTCGGCTCA 175
************************ ************ *****************
consensus_7345#0 GTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGTTCCGCAAGGAGGACATATC 712
consensus_7345#1 GTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGCTTCGCAAGGAGGATATATC 235
**************************************** * *********** *****
consensus_7345#0 AAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCCTATCATCGTCAACACAGTTATTGGCT 772
consensus_7345#1 AAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCTTATCATCATCAACACAATTGTTGTCT 295
********************************* ******* ******** ** *** **
consensus_7345#0 ACAAAACGAAAGTTAGCAGCATCGAATCCTCCAACAGCAAAGCGAAGACGATCACCTATT 832
consensus_7345#1 GCAAAACGAAAGTTAGCAGCATCGAATCCTTCGACAGCGAAGCGAAGACGATCACCTATT 355
***************************** * ***** *********************
consensus_7345#0 GCATTGCCAATAGTCAGGTCTCCAGGAGTGCGACAAATTATTTCCCAAAATGAAGTCATC 892
consensus_7345#1 GTATTGCCAATAGTCAGGTCTCCAGGAGTGCGCCAAATTATTTCTCAAAATGCTCTCATC 415
* ****************************** *********** ******* *****
consensus_7345#0 ATGGAGAGATCACAAGTTGCTGGTCAGATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGA 952
consensus_7345#1 ATGGAGAGATCACAAGTTCCTGGTCATATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGA 475
****************** ******* *********************************
consensus_7345#0 TCTATGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTGCTATCCCAATTGAGCTGGAT 1012
consensus_7345#1 TCTCTGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTACTATCC---TTGAGCTGGAT 532
*** *********************************** ****** ***********
consensus_7345#0 GTTGAAACTCAGCCAAGGGAGTCAACTCAATCAACACCTCATGTTGTGACTCATCGTTCT 1072
consensus_7345#1 GTTGAAAATCAGCCAAGGGAATCAAGTCAACCAACACCTCATGTTGTGACTCATCGTTCT 592
******* ************ **** **** *****************************
consensus_7345#0 GGGAAAAGAACACTCAAATCTTTAATCTGGAAAGAATTTAAACCATTTTATTCTTCTACT 1132
consensus_7345#1 GG---------------------------------------------------------- 594
**
consensus_7345#0 GGAAAGGTGCTCTATGGGAAATGCATTCATTGCAGTAAGGTAATTAAAGCTAACCGTGGT 1192
consensus_7345#1 ------------------------------------------------------------
consensus_7345#0 TCGGGGACAAGTCAATGCCATAGACATTTACTTAAGTGTCCACTGAGAATTAGAGTGCAA 1252
consensus_7345#1 ------------------------------------------------------------
consensus_7345#0 CAATTGGTTGAAAGTTTGCATTCCAGTCTATCTCCTAATGCATCTGTTCTAAAGGACTGG 1312
consensus_7345#1 ---------------------------TTAGCACCTAATACATTTGTTCTAAAGGACTGG 627
** * ****** *** ****************
consensus_7345#0 AAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGCTTGTTTTGCAAGAACTT 1372
consensus_7345#1 AAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGATTGTTTTGCAAGAACTT 687
****************************************** *****************
consensus_7345#0 CCTTTCAGTTTTGTTGAACACCCTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTAC 1432
consensus_7345#1 CCTTCCAGCTTTGTTGAACACCTTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTAC 747
**** *** ************* *************************************
consensus_7345#0 TTTAGGGTGCTTTCCAGAATTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAA 1492
consensus_7345#1 TTTAGGGTGGTTTCTAGAACTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAA 807
********* **** **** ****************************************
consensus_7345#0 AAGTTAGCTTTGTTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGGCGGCTGAC 1552
consensus_7345#1 AAGTTAGCTTTGCTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGACGGCTGAC 867
************ ************************************** ********
consensus_7345#0 ATGTGGTCATCTAATCAAAACCTAGGTTACATGTGTATAACTTGTCACTTCATTGACAAT 1612
consensus_7345#1 ATGTGGTCATCTAATCAAAACCTAGGTTACATGTGCATAACTTGTCACTTCATTGACAAT 927
*********************************** ************************
consensus_7345#0 GAATGGAATATTCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCC-ACATGATAGT 1671
consensus_7345#1 GAATGGAATATGCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCCCACATGATAGT 987
*********** ************************************* **********
consensus_7345#0 ATAGCTCTCTTCAATGAAATTCTAAAGTGTATTCAGGATTGGCAGATAGAAAGTAAGTTG 1731
consensus_7345#1 ATAGCTCTCTTCAATGAAATTATAAAGTGCATTCAAGATTGGCAGATAGAAAGTAAGTTG 1047
********************* ******* ***** ************************
consensus_7345#0 TTCAGTATTACAGTAGACAATGCATCTGTTAATGATTCTATGGTTGTGGAATTGAAAGGA 1791
consensus_7345#1 TTCAGTATTACAGTAGACAATGCATCTACTAATGATTCTATGGTTGTGGAATTGAAAGGA 1107
*************************** *******************************
consensus_7345#0 AATCTCTTGGGTAAGCTTGCCATGCCTTGCAAAGGGGAGCTATTTCATTTCCGGTGCGCA 1851
consensus_7345#1 AATCTCTTGGGTAAACTTGCTATGCCTTGCAAAGGAGAGCTATTTCATTTCTGGTGCGCA 1167
************** ***** ************** *************** ********
consensus_7345#0 GCTCACATCCTTAATCTTATTGTTCAAGATGGATTGAGTACTATCAGTGGTGCCATATCT 1911
consensus_7345#1 GCTCACATCTTTAATCCTATTGTTCAAGATGGATTGAGTACTATCAGTGCTGCCATATCC 1227
********* ****** ******************************** *********
consensus_7345#0 AGGATAAGGGAAAGTGTAAAGTATATAAAAGCATCAGAAGCATGTGAGCAAAAATTTGAA 1971
consensus_7345#1 AGGATAAGGGAAAGTGTGAAGTATGTAAGAGCATCAGAAGCACGGGAGCAAAAATTTGAA 1287
***************** ****** *** ************* * ***************
consensus_7345#0 GAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTGTCCACT 2031
consensus_7345#1 GAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTCTCCACT 1347
***************************************************** ******
consensus_7345#0 CGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGAT 2091
consensus_7345#1 CGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGAT 1407
************************************************************
consensus_7345#0 TCATTGGATCGGTTTGATCCAAACTTTCAAGATGCTCCACTATTTTTTGATTGGGACAAT 2151
consensus_7345#1 TCATTGGATCGGTTTGATCCTAACTTTAAAGATGCTCCACAATTTTTCGATTGGGAGAAT 1467
******************** ****** ************ ****** ******** ***
consensus_7345#0 GCAGAAGTTCTTTGCAAACATCTCAAGATCTTCTATGATGCAACTGTTGTGGTTTCCGGG 2211
consensus_7345#1 GCAGAAGTTCTTTGCAAACATCTCAAGGTCTTCTATGATGCAACTGTTGTGGTTTCCGGG 1527
*************************** ********************************
consensus_7345#0 ACATCATATCCCACTGTTTCTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGCTT 2271
consensus_7345#1 ACATCATATCCCACTGTTACTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGATT 1587
****************** ************************************** **
consensus_7345#0 CTAAATGAGTCCAACAGTGAGGATGTTCTTGTCGCTAGCATGGTTTCTAAAATGGATACA 2331
consensus_7345#1 CTAAATGAGTCCAACAATGAGGATGATCTTGTTGCTAGCTTGGTTTCTAAAATGGATACA 1647
**************** ******** ****** ****** ********************
consensus_7345#0 AAATTTCAGAAATATTGGGATCTGCAGTTCCTGCAGATTTGTGTTCCTGTTATTTTTTAT 2391
consensus_7345#1 AAATTTCAGAAATATTGGGATCTACAGTTCCTGCAGATTTGGGTTCCTGTTATTTTTGAT 1707
*********************** ***************** *************** **
consensus_7345#0 CCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCA 2451
consensus_7345#1 CCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCA 1767
************************************************************
consensus_7345#0 ACTGGTCCAAATGGATATCTGTCTAGAATTAAGAGGATAGTCCGCAGTTGGTTTGTTGAA 2511
consensus_7345#1 ACTGGTCCAAATGGATATCTCCCTAGAATTAAGAGGACAGTCCGTACTTGGTTTGCTGAA 1827
******************** *************** ****** * ******** ****
consensus_7345#0 TATTCTTCACAAATTGGTGGTCCAAGCGCAATCAATTCTCAAGAAGCATCAACTAGTGGA 2571
consensus_7345#1 TATTCTTCACAAATTTGTGGTCCAAGCACAACCAATTCTCAAGAAGCATCAACTAGTGGG 1887
*************** *********** *** ***************************
consensus_7345#0 GTGAATGTTGGTGGCAGCCAATTTGCTGACTGGAGGCAATATCTTCATGATCAAAGCAAG 2631
consensus_7345#1 GTGAATGTTGGTGGCAGCCAATTTGCTGACTAGAGGCAATATCTTCATGATCAAAGCAAG 1947
******************************* ****************************
consensus_7345#0 AGTAAAG-AAAGACTGAGTTAACTAGCTATCTCGAAGATATTCCTCAAGAAAATGATTTC 2690
consensus_7345#1 AGTAAAGTAAAGACTGAGTTAACTAGATATCTCGAAGATATTCCTCAAGAAAATGATTTC 2007
******* ****************** *********************************
consensus_7345#0 CCTGATGATGATTTTGACATACTCCAGTGGTGGAGGGTAAACTCATGCAAATATCCAATA 2750
consensus_7345#1 CCTGATGATGATTTTGACATACTCTAGTGGTGGAGGGTGAACTCTTGCAAATATCCAATA 2067
************************ ************* ***** ***************
consensus_7345#0 TTATCACGCATGGCGCTTGATTTGCTTGCTGTCCCTGCATCTTCAGTTGCATCAGATTCT 2810
consensus_7345#1 TCATCACGCATGGCACTTGATTTGCTTGCTGTCCCTGCATCCTCAGTTGCATCAGAGTCT 2127
* ************ ************************** ************** ***
consensus_7345#0 GCATTTTCTACTGGATCTAGAATCATTAGTGACTATAGGAGTAGGCTGGCTAATGGAACT 2870
consensus_7345#1 GCATTTTCTACTGGATAAAGAATCATTAGCGACTATAGGAGTAGGTTGGCTAGTGGAACT 2187
**************** *********** *************** ****** *******
consensus_7345#0 GTGGTGGCATTGGTTTGCCTTCAAGATTAGATGCGAGCAGATGGTTTTGGTGATCCCTAT 2930
consensus_7345#1 GTGGAGGCATTGGTTTGCCTTCAAGATTGGATGCGAGCCGATGGTTTTGGTGATCCATAT 2247
**** *********************** ********* ***************** ***
consensus_7345#0 TCAATTCTAACTGATACGGTTGAGGACGATGATGTTAATATGCAACTATTAGGA-AGTAA 2989
consensus_7345#1 TCAATTCAAACTGATACGGCTGAGGGCGATGATGTTAATATGCAACTATTGGGACATTAA 2307
******* *********** ***** ************************ *** * ***
consensus_7345#0 TGCAGGAGCGTGCTCTGGTGG--TGGGGGCAAAACTCAATGAAATTTTCCTTTCTGGAAT 3047
consensus_7345#1 ATCATTTGACATCTCAGGCAAATTACCATGTGAGTTCTATGCAATCTGGGTT-CTGAGAA 2366
** * *** ** * * ** *** *** * ** *** *
consensus_7345#0 GTTATATTCTAACTGCA--AGGGATGAGATGGCCTTCAGCAGCTGCGAATGCTGCTACCA 3105
consensus_7345#1 ATTTTGCTAGTTCTGGAGCAGTGGTAAGTGGAGCTTGCTTTGTTTCCCA-GCTCATATCA 2425
** * * *** * ** * * ** * *** * * * * *** ** **
consensus_7345#0 CTAGTTTTGTTCCCTGT-AGTTTTTATTTCAGTAACTTAGTTCGTTTAGATGCACTAGCC 3164
consensus_7345#1 GTGTTTCCCACACATGTCAGATTACATCCAAAATTTGTACGATGTATTGGAAATTTAGTT 2485
* ** * *** ** ** ** * ** ** * * ***
consensus_7345#0 G---TTGTCATTTTTGTGCATGTCCAGAGCC--TG---CTGAAAATAGTAT--GAT---G 3211
consensus_7345#1 GAGCCTGGGATTTCTGGACTTCTTTTCTGCCGTTGAGCCTGAAATTCATATTTGATTTTG 2545
* ** **** ** * * * *** ** ****** * *** *** *
consensus_7345#0 TATTGGAAATTCAGT-TGAGC--CTGGGATTTCTGGACTTTTTGTTCTGCCGTTTTGCTG 3268
consensus_7345#1 CCTGGTGAATTCTGCATGAGTGACAGGAATAGATGCAAGGATTAGGCGGCTTTGTTGCTG 2605
* * ***** * **** * ** ** ** * ** * ** * ******
consensus_7345#0 CTGC----TGC-TACCGTTCTGGCCTCCTGCTGCTGGGCTAGTGCTGCTGCTGGTTGAAA 3323
consensus_7345#1 TCAGGATATGCATGTCTTTTGAGTCCCTTTTTTTTTTCCCCTTTATGCTGTTG-TTAAGC 2664
*** * * ** * * * * * * * * ***** ** ** *
consensus_7345#0 TCCTCAC-TGTGAGAAGGACATCAATTTTTGGTTGTATTTTGCAGTGTTGATATGAATTG 3382
consensus_7345#1 TATGAATATTTTGGAAGGGGATTTTTTTAGAACAATTTGATTAAGGATCGGTGGATTTTT 2724
* * * * ***** ** *** * * * ** * * * **
consensus_7345#0 TT--CAGATACAAGCCT------------------------------------------- 3397
consensus_7345#1 ATGCCAAATTGTAGACTCTGCTTTTCGCTGCAGTCACTGTCTTTCAGAAGATTTCAGGGC 2784
* ** ** ** **
consensus_7345#0 ------------------------------------------------------------
consensus_7345#1 CCAAGATGGTTNCTAATATTTACTGATTTTCTGTTTCAAAAAAAAAAAAAAAAAAAAAAA 2844
consensus_7345#0 --------
consensus_7345#1 AAAAAAAA 2852
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||