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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7348#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3105 fasta sequence
[TGCACTCCAGCGTCCGTTGGGTTGGGCGTAGTGCCGTAGTGTAGCTTCATCTCGTCTCGTCATCGGGGTCGCCGGCGGTGAGGGGCAGGCAAAGAACAAGATGGAGCTCGCCGTAGGCGCCTCGGACAGCGCCATGAGGTCGCTGCTGGGAAAGCTCGGCAGCCTCCTGGCCCAGGAGTACACGCTCATCAGCGGCGTTCGCAGCGAGATCCAGTACATCAAGGACGAGCTGGCCAGCATGCACGCCTTCCTCCTCAACCTCGGCCACGCCGCCGGCCACCACCATGACGAGCAGACCCGGGGACTGGATGGAGCAGGTGCGCGACGTCGCCTACGACATCGAGGACTGCATCGACGACTTCAGCCACCGCCTCGGCGGCCAGCCACGCGGCGAGGGCCTCCTGTCCGGCCTCCGCCGCGCGAGGTACGCCGTGGCCACGCTCTGGGAGCGCCGGGGCATCGCCGCCAGGGTCGTCGACCTCAAGAACCGCGCGCAGGGCGTCGGCGAGCGCCGCACGAGGTACGGTGTGAAGGACCCCGGCCGGCCGGACGCCGGGAACGGGAAGGCCGCCAGATCCGCCCCTTCCTACCACGTCAACGACCGCCCCCAGCCTGGTCCGCAGCTCGTCGGCGCCGCGGAGTCGGTGGGGATGGAGGACGCCATCGGCAAGCTCGGGGCATGGCTGACCGAGGGGCTGCCCGACCTGAGGGTCCTCGCCGTCGTCGGATTCGGCGGCCTCGGCAAGACGACGCTGGCATTGGCGCTGCACCGCAAGTTCGGGGAGAAGTTCGAGTCCCGGGCGTGCGTGCAGGCGTCGCAGAAGCTCAATCTCGCGGCGCTGCTCAGAAGCATCCTCAGGCAAGTCATGCCTCAGGTCCCTGACAAGGAGAGCACAGATGGAGACTCTCTTGCAGGGATCGAGAGATGGACAGACAAGCAGCTTAAGGAGAAGCTCACAGCACATTTGGAACAAAAGAGGTACTCCTTTCCCCCTTCGGCTCCATGATTCTTAATGTTTTGGATAATATTAAAGTCATCAAACTTTTATAACTTTAAAACTATTTAGTTTAAATGCACTTAAGGCTATGTTTGGAGATAGGTGTTAGAAACCATCTCCTATACATGAAAAACGGAGCGGTTCATTAACACGTGATTAATTAAGTATTAACTAATTTTTTTTTCAAAAATGGATCAATATGAATTTTTTTGATAACTTTTGTATAAAAACTTTTTGTAAAAAAAACACACTATTTAGCAGTTTGAAAAGCGTGCACGCGGAAAACGAGAGGAGAGTGTTGGGAACTTGCTCTTGCAAACACACCCTAAATCAACACATATATAGATTTATCTTACAAAGTATTATAATAAAAGTAAAAATATGTTAATTTATTATATATATTATTATTAAAAAAACATAGTCAAACATATATATTTTGAAGATCGTGTTATTGTCCAAAACTTGGAATTATGGAACAGAGGGAGCATACTACTATACATAGTTTGCTATCATCTTTACTTCTTTAGTGCTGAGTTATTACTTTTATAATCCAGTCAATGATTAAATGCGGAGAATATAGAGGTCCGATTTCTATCCTTTATAGAAAAATAACTAAATGTGGAGAAACACAGTTTTTCTCTGGTTTTTTTTCTAATAAAAATTTCGTAATTATGTATTTAATTATATTTCCTGCCATGGTAATGTGTTATTAATCATGTTTTTCTTTTGGATAAAAGTTGCTAGAATGCCCTCAATTTTATTAGCAAATCTGCAAAATAACTTCAGGCTACCACTACAGCAGATTGATCCTGATTTGTGAATTCTGATGTTCTGTGTCTACCATACATGCCTAAGGCTAAACCCAAGTTGCAATTTACCATTTCTAAAATGATAACTGCATTCTCAACTAACGTAACTAATGGAGATGAATACCAACTTTGAAGTTCATTCTCCACCATATATGAATATGAGCAAGAAATTCAGCATTCCGCTTAATCTTTCGGAATTGTTAGTACTAGGACACCATTGAAGCACAGTCAAATGAAGTACTTCCTAGTATTCAAAATTTATGGTTCTGTCTGTCCACTAATCTATTATATCTTTAAAGTAATAGAAAAAGAAGCCTCCATGTTCGCTCTCACAACCTAGAAATTCTCACATTAATCAAAAAAATAAGAAAAAGGAAAAATAGAACTAGATTAGGATTAGGATTAGTTAAAAACTAAAGAAAGGAGAAAAGAAGATGAATCGGACAATCAGTCAAAACGAAAATAAGATTAATCCAAAAGAATAAGGAAAAAGAAAAATAGAACTAGATTAGGATTAGAATTAGTTAAAAACTGAAGAAAAAAAAAGATAATCGGACAATCAGTCAAAATGAAAATAAGGAAAACCGAGTCATACAATACATTGGAAACTGACAATGTTTTGGGAATCCGCATGTTCACACCACTTTTAGAAACATTGAAAGACAAACCAATCCTAATTAAACTCTAATCAAACTCTTGCCGTTTCCGAATCGTATAAGTACTTGTCATGTCAATAAATACTTCAACAAGCTAACCAAAGCAAACCAGAAATCTTCAACAAGCCAAAAAAAAAACTTCTTGCAGTGACCGTCGCCGTGATCATCAACAAGCACGCCACAAATTAGCAAATTCACCGGGTTCTTGCCGTTCAAACTTCTCGCCAGCACGCCACAAATCTGCAAGCCAGAAGTTCTCACCGGAATCCACTTCGTCAATCAAAAAGGCACCCAGGAATTGTTCTTGCTGGAATCACTATGGCATACAAGAAGATTAGTGAGTTGACAACAAAAGGTCAAACATGGAGAATCAAAGCGATATTGAGAATGTAGGAATCGGTAAATTTTGCAACAGATGAGATTATGAGTTTTGATATGCTATTAATGGATGAAGTCCGTACATGCAGAACAAGGTCCGCGAAATAAAATGGACTGGCACATCCTATCTAAGTCCAACAGGATTAGATTAAGCCGACATTCCAGAAATGCAAAAATCATTAAAAAAATAAAAAAAAGAAAAACGGACTGGCACATCCTATCTAAGTCCAACAGGATTAGATTAAGCCGACATTCCAGAAATGC]
[+] EMBL AK119331 [TGCACTCCAGCGTCCGTTGGGTTGGGCGTAGTGCCGTAGTGTAGCTTCATCTCGTCTCGTCATCGGGGTCGCCGGCGGTGAGGGGCAGGCAAAGAACAAGATGGAGCTCGCCGTAGGCGCCTCGGACAGCGCCATGAGGTCGCTGCTGGGAAAGCTCGGCAGCCTCCTGGCCCAGGAGTACACGCTCATCAGCGGCGTTCGCAGCGAGATCCAGTACATCAAGGACGAGCTGGCCAGCATGCACGCCTTCCTCCTCAACCTCGGCCACGCCGCCGGCCACCACCATGACGAGCAGACCCGGGGACTGGATGGAGCAGGTGCGCGACGTCGCCTACGACATCGAGGACTGCATCGACGACTTCAGCCACCGCCTCGGCGGCCAGCCACGCGGCGAGGGCCTCCTGTCCGGCCTCCGCCGCGCGAGGTACGCCGTGGCCACGCTCTGGGAGCGCCGGGGCATCGCCGCCAGGGTCGTCGACCTCAAGAACCGCGCGCAGGGCGTCGGCGAGCGCCGCACGAGGTACGGTGTGAAGGACCCCGGCCGGCCGGACGCCGGGAACGGGAAGGCCGCCAGATCCGCCCCTTCCTACCACGTCAACGACCGCCCCCAGCCTGGTCCGCAGCTCGTCGGCGCCGCGGAGTCGGTGGGGATGGAGGACGCCATCGGCAAGCTCGGGGCATGGCTGACCGAGGGGCTGCCCGACCTGAGGGTCCTCGCCGTCGTCGGATTCGGCGGCCTCGGCAAGACGACGCTGGCATTGGCGCTGCACCGCAAGTTCGGGGAGAAGTTCGAGTCCCGGGCGTGCGTGCAGGCGTCGCAGAAGCTCAATCTCGCGGCGCTGCTCAGAAGCATCCTCAGGCAAGTCATGCCTCAGGTCCCTGACAAGGAGAGCACAGATGGAGACTCTCTTGCAGGGATCGAGAGATGGACAGACAAGCAGCTTAAGGAGAAGCTCACAGCACATTTGGAACAAAAGAGGTACTCCTTTCCCCCTTCGGCTCCATGATTCTTAATGTTTTGGATAATATTAAAGTCATCAAACTTTTATAACTTTAAAACTATTTAGTTTAAATGCACTTAAGGCTATGTTTGGAGATAGGTGTTAGAAACCATCTCCTATACATGAAAAACGGAGCGGTTCATTAACACGTGATTAATTAAGTATTAACTAATTTTTTTTTCAAAAATGGATCAATATGAATTTTTTTGATAACTTTTGTATAAAAACTTTTTGTAAAAAAAACACACTATTTAGCAGTTTGAAAAGCGTGCACGCGGAAAACGAGAGGAGAGTGTTGGGAACTTGCTCTTGCAAACACACCCTAAATCAACACATATATAGATTTATCTTACAAAGTATTATAATAAAAGTAAAAATATGTTAATTTATTATATATATTATTATTAAAAAAACATAGTCAAACATATATATTTTGAAGATCGTGTTATTGTCCAAAACTTGGAATTATGGAACAGAGGGAGCATACTACTATACATAGTTTGCTATCATCTTTACTTCTTTAGTGCTGAGTTATTACTTTTATAATCCAGTCAATGATTAAATGCGGAGAATATAGAGGTCCGATTTCTATCCTTTATAGAAAAATAACTAAATGTGGAGAAACACAGTTTTTCTCTGGTTTTTTTTCTAATAAAAATTTCGTAATTATGTATTTAATTATATTTCCTGCCATGGTAATGTGTTATTAATCATGTTTTTCTTTTGGATAAAAGTTGCTAGAATGCCCTCAATTTTATTAGCAAATCTGCAAAATAACTTCAGGCTACCACTACAGCAGATTGATCCTGATTTGTGAATTCTGATGTTCTGTGTCTACCATACATGCCTAAGGCTAAACCCAAGTTGCAATTTACCATTTCTAAAATGATAACTGCATTCTCAACTAACGTAACTAATGGAGATGAATACCAACTTTGAAGTTCATTCTCCACCATATATGAATATGAGCAAGAAATTCAGCATTCCGCTTAATCTTTCGGAATTGTTAGTACTAGGACACCATTGAAGCACAGTCAAATGAAGTACTTCCTAGTATTCAAAATTTATGGTTCTGTCTGTCCACTAATCTATTATATCTTTAAAGTAATAGAAAAAGAAGCCTCCATGTTCGCTCTCACAACCTAGAAATTCTCACATTAATCAAAAAAATAAGAAAAAGGAAAAATAGAACTAGATTAGGATTAGGATTAGTTAAAAACTAAAGAAAGGAGAAAAGAAGATGAATCGGACAATCAGTCAAAACGAAAATAAGATTAATCCAAAAGAATAAGGAAAAAGAAAAATAGAACTAGATTAGGATTAGAATTAGTTAAAAACTGAAGAAAAAAAAAGATAATCGGACAATCAGTCAAAATGAAAATAAGGAAAACCGAGTCATACAATACATTGGAAACTGACAATGTTTTGGGAATCCGCATGTTCACACCACTTTTAGAAACATTGAAAGACAAACCAATCCTAATTAAACTCTAATCAAACTCTTGCCGTTTCCGAATCGTATAAGTACTTGTCATGTCAATAAATACTTCAACAAGCTAACCAAAGCAAACCAGAAATCTTCAACAAGCCAAAAAAAAAACTTCTTGCAGTGACCGTCGCCGTGATCATCAACAAGCACGCCACAAATTAGCAAATTCACCGGGTTCTTGCCGTTCAAACTTCTCGCCAGCACGCCACAAATCTGCAAGCCAGAAGTTCTCACCGGAATCCACTTCGTCAATCAAAAAGGCACCCAGGAATTGTTCTTGCTGGAATCACTATGGCATACAAGAAGATTAGTGAGTTGACAACAAAAGGTCAAACATGGAGAATCAAAGCGATATTGAGAATGTAGGAATCGGTAAATTTTGCAACAGATGAGATTATGAGTTTTGATATGCTATTAATGGATGAAGTCCGTACATGCAGAACAAGGTCCGCGAAATAAAATGGACTGGCACATCCTATCTAAGTCCAACAGGATTAGATTAAGCCGACATTCCAGAAATGCAAAAATCATTAAAAAAATAAAAAAAAGAAAAACGGACTGGCACATCCTATCTAAGTCCAACAGGATTAGATTAAGCCGACATTCCAGAAATGC]
[+] EMBL CB664532 [ CGTCCGTTGGGTTGGGCGTAGTGCCGTAGTGTAGCTTCATCTCGTCTCGTCATCGAGGTCGCCGGCGGTGAGGGGCAGGCAAAGAACAAGATGGAGCTCGCCGTAGGCGCCTCGGACAGCGCCATGAGGTCGCTGCTGGGAAAGCTCGGCAGCCTCCTGGCCCAGGAGTACACGCTCATCAGCGGCGTTCGCAGCGAGATCCAGTACATCAAGGACGAGCTGGCCAGCATGCACGCCTTCCTCCTCAACCTCGGCCACGCCGCCGGCCACCACCATGACGAGCAGACCCGGGGACTGGATGGAGCAGGTGCGCGACGTCGCCTACGACATCGAGGACTGCATCGACGACTTCAGCCACCGCCTCGGCGGCCAGCCACGCGGCGAGGGCCTCCTGTCCGGCCTCCGCCGCGCGAGGTACGCCGTGGCCACGCTCTGGGAGCGCCGGGGCATCGCCGCCAGGGTCGTCGACCTCAAGAACCGCGCGCAGGGCGTCGGCGAGCGCCGCACGAGGTACGGTGTGAAGGACCCCGGCCGGACGGACGCCGGGAACGGGAATGCCGCCGGATCC ]
consensusID : consensus_7348#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 804 fasta sequence
[GAGGGACGCCATCGGCAAGCTCGGGGCATGGCTGACCGAGGGGCTGCCCGACCTGAGGGTCCTCGCCGTCGTCGGATTCGGCGGCCTCGGCAAGACGACGCTGGCATTGGCGCTGCACCGCAAGTTCGGGGAGAAGTTCGAGTCCCGGGCGTGCGTGCAGGCGTCGCAGAAGCTCAATCTCGCGGCGCTGCTCAGAAGCATCCTCAGGCAAGTCATGCCTCAGGTCCCTGACAAGGAGAGCACAGATGGAGACTCTCTTGCAGGGATCGAGAGATGGACAGACAAGCAGCTTAAGGAGAAGCTCACAGCACATTTGGAACAAAAGAGGTACTTCCTCTTAGTAGATGATGTCTGGTCTGTATCTTCATGGGAATACATCTGGGGATCTTTGCCCAAAAATAACAATGGCAGTAGAATAGTGGTGACAACAAGGTTCAAATCTGTAGCTGACGCCAGCACTCATCAGCAAACAGGTGACATCCACATGCTAGATCGGCTTTCAGATGAGAAATCAAAACGACTGTTCAATGAAAGAATCTTTAGTGGTGATGATTCATGCCCGGACGAGTTCAGGGAAACCAAGGACAAAATTCTGAAGAAATGCGGTGGTCTGCCACTGGCAATAGTTGCGGTGGCAGGACTTCTGGCCAGAGACCCAAGGTCAAAGAGCCATTGGACAAAGGTGCAAGATTCTTTTAAGTTCAGAGCTGGAGATGAATCTTAGGCCTTGTTTAGATGGGACTAAAACTTTTAAGTCCCTATCACATCGGATGTTTGAAAATTAATTATAAATATTAAACGTAG]
[-] EMBL CB664533 [GAGGGACGCCATCGGCAAGCTCGGGGCATGGCTGACCGAGGGGCTGCCCGACCTGAGGGTCCTCGCCGTCGTCGGATTCGGCGGCCTCGGCAAGACGACGCTGGCATTGGCGCTGCACCGCAAGTTCGGGGAGAAGTTCGAGTCCCGGGCGTGCGTGCAGGCGTCGCAGAAGCTCAATCTCGCGGCGCTGCTCAGAAGCATCCTCAGGCAAGTCATGCCTCAGGTCCCTGACAAGGAGAGCACAGATGGAGACTCTCTTGCAGGGATCGAGAGATGGACAGACAAGCAGCTTAAGGAGAAGCTCACAGCACATTTGGAACAAAAGAGGTACTTCCTCTTAGTAGATGATGTCTGGTCTGTATCTTCATGGGAATACATCTGGGGATCTTTGCCCAAAAATAACAATGGCAGTAGAATAGTGGTGACAACAAGGTTCAAATCTGTAGCTGACGCCAGCACTCATCAGCAAACAGGTGACATCCACATGCTAGATCGGCTTTCAGATGAGAAATCAAAACGACTGTTCAATGAAAGAATCTTTAGTGGTGATGATTCATGCCCGGACGAGTTCAGGGAAACCAAGGACAAAATTCTGAAGAAATGCGGTGGTCTGCCACTGGCAATAGTTGCGGTGGCAGGACTTCTGGCCAGAGACCCAAGGTCAAAGAGCCATTGGACAAAGGTGCAAGATTCTTTTAAGTTCAGAGCTGGAGATGAATCTTAGGCCTTGTTTAGATGGGACTAAAACTTTTAAGTCCCTATCACATCGGATGTTTGAAAATTAATTATAAATATTAAACGTAG]
consensusID : consensus_7348#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 737 fasta sequence
[TCAGTCAAAATGAAAATAAGGAAAACCGAGTCATACAATACATTGGAAACTGACAATGTTTTGGGAATCCGCATGTTCACACCACTTTTAGAAACATTGAAAGACAAACCAATCCTAATTAAACTCTAATCAAACTCTTGCCGTTTCCGAATCGTATAAGTACTTGTCATGTCAATAAATACTTCAACAAGCTAACCAAAGCAAACCAGAAATCTTCAACAAGCCAAAAAAAAACTTCTTGCAGTGACCGTCGCCGTGATCATCAACAAGCACGCCACAAATTAGCAAATTCACCGGGTTCTTGCCGTTCAAACTTCTCGCCAGCACGCCACAAATCTGCAAGCCAGAAGTTCCCACCGGAATCCACTTCGTCAATCAAAAAGGCACCCAGGAATTGTTCTTGCTGGAATCACATCCGGAGAGGAGTTGAGAGGCTGTTGGGGGAGGATGCGTCGATGCTAGCGCGTGCATAAGCTCCATAGAAGATCAGGACCCGACGCGGCCATGGACGCCCGCCGTCGGCGGCTGGGGAAGGAGCAGCCTCGATCTACGCCTGCGATGGCGTCCAGGGAGGGAGCCGCCTCAATCCGCACCTACGGTGGCGGCCGGGGACGGAGCCGCCTCGATCCACTCCGGCGGCGGTGCCGGGGACGCGCGCTGGCGGCCGGAGAAGGGGACACGGTGGGGAGGGGAAAAGGGCGGCGCCGCTCGGACGGGGAAGAGAGGGCGGCGCCGCA]
[-] EMBL AK106619 [TCAGTCAAAATGAAAATAAGGAAAACCGAGTCATACAATACATTGGAAACTGACAATGTTTTGGGAATCCGCATGTTCACACCACTTTTAGAAACATTGAAAGACAAACCAATCCTAATTAAACTCTAATCAAACTCTTGCCGTTTCCGAATCGTATAAGTACTTGTCATGTCAATAAATACTTCAACAAGCTAACCAAAGCAAACCAGAAATCTTCAACAAGCCAAAAAAAAACTTCTTGCAGTGACCGTCGCCGTGATCATCAACAAGCACGCCACAAATTAGCAAATTCACCGGGTTCTTGCCGTTCAAACTTCTCGCCAGCACGCCACAAATCTGCAAGCCAGAAGTTCCCACCGGAATCCACTTCGTCAATCAAAAAGGCACCCAGGAATTGTTCTTGCTGGAATCACATCCGGAGAGGAGTTGAGAGGCTGTTGGGGGAGGATGCGTCGATGCTAGCGCGTGCATAAGCTCCATAGAAGATCAGGACCCGACGCGGCCATGGACGCCCGCCGTCGGCGGCTGGGGAAGGAGCAGCCTCGATCTACGCCTGCGATGGCGTCCAGGGAGGGAGCCGCCTCAATCCGCACCTACGGTGGCGGCCGGGGACGGAGCCGCCTCGATCCACTCCGGCGGCGGTGCCGGGGACGCGCGCTGGCGGCCGGAGAAGGGGACACGGTGGGGAGGGGAAAAGGGCGGCGCCGCTCGGACGGGGAAGAGAGGGCGGCGCCGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7348#0 TGCACTCCAGCGTCCGTTGGGTTGGGCGTAGTGCCGTAGTGTAGCTTCATCTCGTCTCGT 60
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 CATCGGGGTCGCCGGCGGTGAGGGGCAGGCAAAGAACAAGATGGAGCTCGCCGTAGGCGC 120
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 CTCGGACAGCGCCATGAGGTCGCTGCTGGGAAAGCTCGGCAGCCTCCTGGCCCAGGAGTA 180
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 CACGCTCATCAGCGGCGTTCGCAGCGAGATCCAGTACATCAAGGACGAGCTGGCCAGCAT 240
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 GCACGCCTTCCTCCTCAACCTCGGCCACGCCGCCGGCCACCACCATGACGAGCAGACCCG 300
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 GGGACTGGATGGAGCAGGTGCGCGACGTCGCCTACGACATCGAGGACTGCATCGACGACT 360
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TCAGCCACCGCCTCGGCGGCCAGCCACGCGGCGAGGGCCTCCTGTCCGGCCTCCGCCGCG 420
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 CGAGGTACGCCGTGGCCACGCTCTGGGAGCGCCGGGGCATCGCCGCCAGGGTCGTCGACC 480
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TCAAGAACCGCGCGCAGGGCGTCGGCGAGCGCCGCACGAGGTACGGTGTGAAGGACCCCG 540
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 GCCGGCCGGACGCCGGGAACGGGAAGGCCGCCAGATCCGCCCCTTCCTACCACGTCAACG 600
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 ACCGCCCCCAGCCTGGTCCGCAGCTCGTCGGCGCCGCGGAGTCGGTGGGGATGGAGGACG 660
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 CCATCGGCAAGCTCGGGGCATGGCTGACCGAGGGGCTGCCCGACCTGAGGGTCCTCGCCG 720
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TCGTCGGATTCGGCGGCCTCGGCAAGACGACGCTGGCATTGGCGCTGCACCGCAAGTTCG 780
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 GGGAGAAGTTCGAGTCCCGGGCGTGCGTGCAGGCGTCGCAGAAGCTCAATCTCGCGGCGC 840
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TGCTCAGAAGCATCCTCAGGCAAGTCATGCCTCAGGTCCCTGACAAGGAGAGCACAGATG 900
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 GAGACTCTCTTGCAGGGATCGAGAGATGGACAGACAAGCAGCTTAAGGAGAAGCTCACAG 960
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 CACATTTGGAACAAAAGAGGTACTCCTTTCCCCCTTCGGCTCCATGATTCTTAATGTTTT 1020
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 GGATAATATTAAAGTCATCAAACTTTTATAACTTTAAAACTATTTAGTTTAAATGCACTT 1080
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 AAGGCTATGTTTGGAGATAGGTGTTAGAAACCATCTCCTATACATGAAAAACGGAGCGGT 1140
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TCATTAACACGTGATTAATTAAGTATTAACTAATTTTTTTTTCAAAAATGGATCAATATG 1200
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 AATTTTTTTGATAACTTTTGTATAAAAACTTTTTGTAAAAAAAACACACTATTTAGCAGT 1260
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TTGAAAAGCGTGCACGCGGAAAACGAGAGGAGAGTGTTGGGAACTTGCTCTTGCAAACAC 1320
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 ACCCTAAATCAACACATATATAGATTTATCTTACAAAGTATTATAATAAAAGTAAAAATA 1380
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TGTTAATTTATTATATATATTATTATTAAAAAAACATAGTCAAACATATATATTTTGAAG 1440
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 ATCGTGTTATTGTCCAAAACTTGGAATTATGGAACAGAGGGAGCATACTACTATACATAG 1500
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TTTGCTATCATCTTTACTTCTTTAGTGCTGAGTTATTACTTTTATAATCCAGTCAATGAT 1560
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TAAATGCGGAGAATATAGAGGTCCGATTTCTATCCTTTATAGAAAAATAACTAAATGTGG 1620
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 AGAAACACAGTTTTTCTCTGGTTTTTTTTCTAATAAAAATTTCGTAATTATGTATTTAAT 1680
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TATATTTCCTGCCATGGTAATGTGTTATTAATCATGTTTTTCTTTTGGATAAAAGTTGCT 1740
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 AGAATGCCCTCAATTTTATTAGCAAATCTGCAAAATAACTTCAGGCTACCACTACAGCAG 1800
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 ATTGATCCTGATTTGTGAATTCTGATGTTCTGTGTCTACCATACATGCCTAAGGCTAAAC 1860
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 CCAAGTTGCAATTTACCATTTCTAAAATGATAACTGCATTCTCAACTAACGTAACTAATG 1920
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 GAGATGAATACCAACTTTGAAGTTCATTCTCCACCATATATGAATATGAGCAAGAAATTC 1980
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 AGCATTCCGCTTAATCTTTCGGAATTGTTAGTACTAGGACACCATTGAAGCACAGTCAAA 2040
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TGAAGTACTTCCTAGTATTCAAAATTTATGGTTCTGTCTGTCCACTAATCTATTATATCT 2100
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 TTAAAGTAATAGAAAAAGAAGCCTCCATGTTCGCTCTCACAACCTAGAAATTCTCACATT 2160
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 AATCAAAAAAATAAGAAAAAGGAAAAATAGAACTAGATTAGGATTAGGATTAGTTAAAAA 2220
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 CTAAAGAAAGGAGAAAAGAAGATGAATCGGACAATCAGTCAAAACGAAAATAAGATTAAT 2280
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 CCAAAAGAATAAGGAAAAAGAAAAATAGAACTAGATTAGGATTAGAATTAGTTAAAAACT 2340
consensus_7348#2 ------------------------------------------------------------
consensus_7348#1 ------------------------------------------------------------
consensus_7348#0 GAAGAAAAAAAAAGATAATCGGACAATCAGTCAAAATGAAAATAAGGAAAACCGAGTCAT 2400
consensus_7348#2 --------------------------TCAGTCAAAATGAAAATAAGGAAAACCGAGTCAT 34
consensus_7348#1 ---------------GAGGGACGCCATCGG-CAAGCTCGGGGCATGGCTGACCGAGGGGC 44
** * *** * * ** ******
consensus_7348#0 ACAATACATTGGAAACTGACAATGTTTTGGGAATCCGCATGTTC------ACACCACTTT 2454
consensus_7348#2 ACAATACATTGGAAACTGACAATGTTTTGGGAATCCGCATGTTC------ACACCACTTT 88
consensus_7348#1 TGCCCGACCTGAGGGTCCTCGCCGTCGTCGGATTCGGCGGCCTCGGCAAGACGACGCTGG 104
** * ** * *** ** ** ** ** * **
consensus_7348#0 TAGAAACATTGAAAGACAAACCAATCCTAATTAAACTCTAATCAAACTCTTGCCGTTTCC 2514
consensus_7348#2 TAGAAACATTGAAAGACAAACCAATCCTAATTAAACTCTAATCAAACTCTTGCCGTTTCC 148
consensus_7348#1 CATTGGCGCTGCACCGCAAGT---TCGGGGAGAAGTTCGAGTCCCGGGCGTGC-GTGCAG 160
* * ** * *** ** ** ** * ** * *** **
consensus_7348#0 GAATCGTATAAGTACT-TGTCATGTCAATAAATACTTCAACAAGCT-AACCAAAGCAAAC 2572
consensus_7348#2 GAATCGTATAAGTACT-TGTCATGTCAATAAATACTTCAACAAGCT-AACCAAAGCAAAC 206
consensus_7348#1 GCGTCGCAGAAGCTCAATCTCGCGGCGCTG--CTCAGAAGCATCCTCAGGCAAGTCATGC 218
* *** * *** * * ** * * * * * ** ** * *** ** *
consensus_7348#0 CAGAAATCTTCAACAAGC------CAAAAAAAAAACTTCTTGCAGTGACCGTCGCCGTGA 2626
consensus_7348#2 CAGAAATCTTCAACAAGC------CAAAAAAAAA-CTTCTTGCAGTGACCGTCGCCGTGA 259
consensus_7348#1 CTCAGGTCCCTGACAAGGAGAGCACAGATGGAGACTCTCTTGCAGGGATCG-------AG 271
* * ** ***** ** * * * ******** ** **
consensus_7348#0 TCATCAACAAGCACGCCACAAATTAGCAAATTCACCGGGTTCTTGCCGTTCAAACTTCTC 2686
consensus_7348#2 TCATCAACAAGCACGCCACAAATTAGCAAATTCACCGGGTTCTTGCCGTTCAAACTTCTC 319
consensus_7348#1 AGATGGACAGACAAGCAGCTTAAGGAGAAGCTCACAGCACATTTGGAACAAAAGAGGTAC 331
** *** ** ** * * ** **** * *** ** *
consensus_7348#0 GCCAGCACGCCACAAATCTGCAAGCCAGAAGTTCTCACCGGAATCCACTTCGTCAATCAA 2746
consensus_7348#2 GCCAGCACGCCACAAATCTGCAAGCCAGAAGTTCCCACCGGAATCCACTTCGTCAATCAA 379
consensus_7348#1 TTCCTCTTAGTAGATGATGTCTGGTCTGTA-TCTTCATGGGAATACATCTGGGGATCTT- 389
* * * * * * * * * * ** ***** ** * * *
consensus_7348#0 AAAGGCACCCAGGAATTGTTCTTGC--TGGAATCACTATGGCATACAAGAAGATTAGTGA 2804
consensus_7348#2 AAAGGCACCCAGGAATTGTTCTTGC--TGGAATCACATCCGGAGAGGAGTTGAGAGGCTG 437
consensus_7348#1 -----TGCCCAAAAATAACAATGGCAGTAGAATAGTGGTGACAACAAGGTTCA-AATCTG 443
**** *** * ** * **** * * *
consensus_7348#0 GTTGACAACAAAAGGTCAAACATGGAGAAT-CA-AAGCGATATTGAGAATGTAGGAATCG 2862
consensus_7348#2 TTGGGGGAGGATGCGTCGATGCTAGCGCGTGCATAAGCTCCATAGAAGAT-CAGGACCCG 496
consensus_7348#1 TAGCTGACGCCAGCACTCATCAGCAAACAGGTGACATCCACATGCTAGAT-CGGCTTTCA 502
* * * ** ** * *
consensus_7348#0 GTAAATTTTGCAACAGATGAGATTATGAGTTTTGATATGC-TATTAATGGATGAAGTCCG 2921
consensus_7348#2 ACGCGGCCATGGACGCCCGCCGTCGGCGGCTGGGGAAGGAGCAGCCTCGATCTACGCCTG 556
consensus_7348#1 GATGAGAAATCAAAACGACTGTTCAATGAAAGAATCTTTAGTGGTGATGATTCATGCCCG 562
* * * * * * *
consensus_7348#0 TA----CATGCAGAACAAGGTCCGCG--AAATAAAATGGACTGGCACATCCTATC-TAAG 2974
consensus_7348#2 CGATGGCGTCCAGGGAGGGAGCCGCCTCAATCCGCACCTACGGTGGCGGCCGGGGACGGA 616
consensus_7348#1 GAC--GAGTTCAGGGAAACCAAGGACAAAATTCTGAAGAAATGCGGTGGTCTGCCACTGG 620
* *** * ** * * * *
consensus_7348#0 TCCAACAGGATTAGATTAAGCCGACATTCCAGAAATGCAAA-------AATCATTAAAAA 3027
consensus_7348#2 GCCGCCTCGATCCACTCCGGCGGCGGTGCCGGGGACGCGCGCT-----GGCGGCCGGAGA 671
consensus_7348#1 CAATAGTTGCGGTGGCAGGACTTCTG-GCCAGAGACCCAAGGTCAAAGAGCCATTGGACA 679
* * ** * * * * *
consensus_7348#0 AATAAAAAAAA------------GAAAAACGGACTGGCAC----ATCCTATCTAAGTCCA 3071
consensus_7348#2 AGGGGACACGGT-----------GGGGAGGGGAAAAGGGC----GGCGCCGCTCGGACGG 716
consensus_7348#1 AAGGTGCAAGATTCTTTTAAGTTCAGAGCTGGAGATGAATCTTAGGCCTTGTTTAGATGG 739
* * *** * * * *
consensus_7348#0 ACAGGATTAGATTAAGCCGACATTCCAGAAATGC-------------------------- 3105
consensus_7348#2 GGAAGAGAGGGCGGCGCCG-CA-------------------------------------- 737
consensus_7348#1 GACTAAAACTTTTAAGTCCCTATCACATCGGATGTTTGAAAATTAATTATAAATATTAAA 799
* * * *
consensus_7348#0 -----
consensus_7348#2 -----
consensus_7348#1 CGTAG 804
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||