These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7351#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2023 fasta sequence [CTTTGCTTGCCACCACGGTCTCCCTCCCTCCCTCCCCTCTCCCATCCAAACCCCACAAAACCGCGACGAGGAGACCCCGCCGCGACGCAGCCGCAGCTCCGCCGGGGGGGGGGGGGGGGGGAGCAACGCCGCCGTGGAGTCCCCTGCCACCCACGAGGGTTCCTGGTGCCTACTTGGTCTGAATGGCTGACCTGACCGACATGGGCTGCTGTAGTTGTTTTTGCTTTTTAAGGAAGCCTAGGGTGTCTGTAAGTCGACCTCGCGACGCTGATGGCATCCTATCTGAAGACTTGTTGAACCATAAATCTGCGGAGGATCCTGATGGAAGCTTCTACACCGGGGATGATCCTGATAGAAGCTTCTACGACAGGGATGATCTCGATAGAAGCTTCTACAATGGCGATGACCCTGACAGAAGCTTCTATGATGGAGATGATCCTGATCATCTTTATGGAAGTGATGATGGGCAGCCAAGGAAGAGATCTGAAGATATTATACTGTCAAGGGCTCAGAATGGCTTTGCATGTAGAGAAAGCCTAGTTAAGGAGACTAAAAAAGTATTTCGCTCAGAGGATGAAAATGGCAGCAAGATGGTCAACCAATATGTCCACCTGGGGAAGATTGGTTCTGGAAGCTATGGCAAAGTGGTCTTATACCGAAGCATGAAAGATGGAAAGCTTTACGCAGTGAAGGTTTTGAATAAATCTTACATGATGAAAGTACGTGTTGTGCGATCAGAAACTGCCATGACAGATGTTCTTCGGGAAGTATCCATCATGAAAATGTTGGATCATCCTAATATAGTAAATCTCATTGAAGTGATTGATGACCCAAATGCAGATAAATTCTACATGGTTCTTGAGTATGTTGAAGGAAAAATGGTCTGTGACAATGGTTTAGGAGAAGCTACCTCCAGAAGTTACTTGCGCGACATAATCTCTGGTGTTATGTATCTTCATTCTCATAATATTATTCATGGTGATATCAAACCAGACAATTTGTTGGTCACAAGCACTGGCAGTGTGAAGATAGGGGATTTCAGTGTTAGTCAGATTTTTGAGGATGATGATGATCTGCTTTGGAGGTCTCCAGGTACTCCTGTTTTCACTGCACCAGAATGCTGTCAAGGTTCAGCCTACCATGGTCGGGCAGCTGATACATGGGCAGTTGGCGTTACTCTGTATTGTATGATTACTGGTCACTATCCATTTCTAGGAGATACCTTACAGGAAACTTATGATAAGATTGTCAATGATCCGGTGCAAATACCTGACAACATGAACCCCCAACTTGCTGATTTGCTGGAAAGGCTTCTCTGCAAAGATCCAGCAAATCGTATCACCCTGCAGGCTGTAGGTGAGCATCCTTGGGTTGCTGGGGACCAGGGGCCAGTTGTTGAATACTTCTGTAGATGTGGGTTTGGCCGAAGAAAGAGAGATGATCTTAAGGGAGAAGTACAATAGCAAAGGCTTGTTCACAGTTTATCATCCGATGGTTTACTGTAGATAGGCGATGAGTGTGGCTAAACAAAGAAAGTGAGATGATCGACAAACCGTGTTACTCTTTTTTGTGTTCTTCCTCCCTTTACCGATTGACCTGTTGGTTGCTCGCCTCACCACCTCTGCAAGTTTTGTTGCCTAACCGAGGGAGCCCCTGTTTCCATTTTTCTGTAGATCAATTTTGGCTGCTGCAACATGTAAGCTTTTTTCATTTGGTTGTTGAATCCAGTATAGCAACCATTCATAGAAAATATAGTGCAAAATTCTTTGTGAAGGCTGTAGTCGGTGTTAGCAATTCATGAGCACCGAGTACA-GATGGGTGCAGGCTGATCTGCGGGTACCCTTAAAAGTGAGATTTAGTTTA-TTTTAGTTTTAGTTGAACTAT-GGTGGGTTGG-AAGATGTGGCCAGCACCATCCTATATTAGATTTTACTTAAGACTCATCCA-TTCAT-GGTGAGTGAATCTCTTGTCAAC-GGAAATTGCTGTAAGTTACTGCATATTTTCCGTAAGGAAGCTTACTGCAATT] [+] EMBL AK102350 [CTTTGCTTGCCACCACGGTCTCCCTCCCTCCCTCCCCTCTCCCATCCAAACCCCACAAAACCGCGACGAGGAGACCCCGCCGCGACGCAGCCGCAGCTCCGCCGGGGGGGGGGGGGGGGGGAGCAACGCCGCCGTGGAGTCCCCTGCCACCCACGAGGGTTCCTGGTGCCTACTTGGTCTGAATGGCTGACCTGACCGACATGGGCTGCTGTAGTTGTTTTTGCTTTTTAAGGAAGCCTAGGGTGTCTGTAAGTCGACCTCGCGACGCTGATGGCATCCTATCTGAAGACTTGTTGAACCATAAATCTGCGGAGGATCCTGATGGAAGCTTCTACACCGGGGATGATCCTGATAGAAGCTTCTACGACAGGGATGATCTCGATAGAAGCTTCTACAATGGCGATGACCCTGACAGAAGCTTCTATGATGGAGATGATCCTGATCATCTTTATGGAAGTGATGATGGGCAGCCAAGGAAGAGATCTGAAGATATTATACTGTCAAGGGCTCAGAATGGCTTTGCATGTAGAGAAAGCCTAGTTAAGGAGACTAAAAAAGTATTTCGCTCAGAGGATGAAAATGGCAGCAAGATGGTCAACCAATATGTCCACCTGGGGAAGATTGGTTCTGGAAGCTATGGCAAAGTGGTCTTATACCGAAGCATGAAAGATGGAAAGCTTTACGCAGTGAAGGTTTTGAATAAATCTTACATGATGAAAGTACGTGTTGTGCGATCAGAAACTGCCATGACAGATGTTCTTCGGGAAGTATCCATCATGAAAATGTTGGATCATCCTAATATAGTAAATCTCATTGAAGTGATTGATGACCCAAATGCAGATAAATTCTACATGGTTCTTGAGTATGTTGAAGGAAAAATGGTCTGTGACAATGGTTTAGGAGAAGCTACCTCCAGAAGTTACTTGCGCGACATAATCTCTGGTGTTATGTATCTTCATTCTCATAATATTATTCATGGTGATATCAAACCAGACAATTTGTTGGTCACAAGCACTGGCAGTGTGAAGATAGGGGATTTCAGTGTTAGTCAGATTTTTGAGGATGATGATGATCTGCTTTGGAGGTCTCCAGGTACTCCTGTTTTCACTGCACCAGAATGCTGTCAAGGTTCAGCCTACCATGGTCGGGCAGCTGATACATGGGCAGTTGGCGTTACTCTGTATTGTATGATTACTGGTCACTATCCATTTCTAGGAGATACCTTACAGGAAACTTATGATAAGATTGTCAATGATCCGGTGCAAATACCTGACAACATGAACCCCCAACTTGCTGATTTGCTGGAAAGGCTTCTCTGCAAAGATCCAGCAAATCGTATCACCCTGCAGGCTGTAGGTGAGCATCCTTGGGTTGCTGGGGACCAGGGGCCAGTTGTTGAATACTTCTGTAGATGTGGGTTTGGCCGAAGAAAGAGAGATGATCTTAAGGGAGAAGTACAATAGCAAAGGCTTGTTCACAGTTTATCATCCGATGGTTTACTGTAGATAGGCGATGAGTGTGGCTAAACAAAGAAAGTGAGATGATCGACAAACCGTGTTACTCTTTTTTGTGTTCTTCCTCCCTTTACCGATTGACCTGTTGGTTGCTCGCCTCACCACCTCTGCAAGTTTTGTTGCCTAACCGAGGGAGCCCCTGTTTCCATTTTTCTGTAGATCAATTTTGGCTGCTGCAACATGTAAGCTTTTTTCATTTGGTTGTTGAATCCAGTATAGC ] [+] EMBL AK060694 [ CTAAAAAAGTATTTCGCTCAGAGGATGAAAATGGCAGCAAGATGGTCAACCAATATGTCCACCTGGGGAAGATTGGTTCTGGAAGCTATGGCAAAGTGGTCTTATACCGAAGCATGAAAGATGGAAAGCTTTACGCAGTGAAGGTTTTGAATAAATCTTACATGATGAAAGTACGTGTTGTGCGATCAGAAACTGCCATGACAGATGTTCTTCGGGAAGTATCCATCATGAAAATGTTGGATCATCCTAATATAGTAAATCTCATTGAAGTGATTGATGACCCAAATGCAGATAAATTCTACATGGTTCTTGAGTATGTTGAAGGAAAAATGGTCTGTGACAATGGTTTAGGAGAAGCTACCTCCAGAAATTACTTGCGCGACATAATCTCTGGTGTTATGTATCTTCATTCTCATAATATTATTCATGGTGATATCAAACCAGACAATTTGTTGGTCACAAGCACTGGCAGTGTGAAGATAGGGGATTTCAGTGTTAGTCAGATTTTTGAGGATGATGATGATCTGCTTTGGAGGTCTCCAGGTACTCCTGTTTTCACTGCACCAGAATGCTGTCAAGGTTCAGCCTACCATGGTCGGGCAGCTGATACATGGGCAGTTGGCGTTACTCTGTATTGTATGATTACTGGTCACTATCCATTTCTAGGAGATACCTTACAGGAAACTTATGATAAGATTGTCAATGATCCGGTGCAAATACCTGACAACATGAACCCCCAACTTGCTGATTTGCTGGAAAGGCTTCTCTGCAAAGATCCAGCAAATCGTATCACCCTGCAGGCTGTAGGTGAGCATCCTTGGGTTGCTGGGGACCAGGGGCCAGTTGTTGAATACTTCTGTAGATGTGGGTTTGGCCGAAGAAAGAGAGATGATCTTAAGGGAGAAGTACAATAGCAAAGGCTTGTTCACAGTTTATCATCCGATGGTTTACTGTAGATAGGCGATGAGTGTGGCTAAACAAAGAAAGTGAGATGATCGACAAACCGTGTTACTCTTTTTTGTGTTCTTCCTCCCTTTACCGATTGACCTGTTGGTTGCTCGCCTCACCACCTCTGCAAGTTTTGTTGCCTAACCGAGGGAGCCCCTGTTTCCATTTTTCTGTAGATCAATTTTGGCTGCTGCAACATGTAAGCTTTTTTCATTTGGTTGTTGAATCCAGTATAGCAACCATTCATAGAAAATATAGTGCAAAATTCTTTGTGAAGGCTGTAGTCGGTGTTAGCAATTCATGAGCACCGAGTACA GATGGGTGCAGGCTGATCTGCGGGTACCCTTAAAAGTGAGATTTAGTTTA TTTTAGTTTTAGTTGAACTAT GGTGGGTTGG AAGATGTGGCCAGCACCATCCTATATTAGATTTTACTTAAGACTCATCCA TTCAT GGTGAGTGAATCTCTTGTCAAC GGAAATTGCTGTAAGTTACTGCATATTTTCCGTAAGGAAGCTTACTGCAATT] [+] EMBL CA759163 [ TGCGCGACATAATCTCTGGTGTTATGTATCTTCATTCTCATAATATTATTCATGGTGATATCAAACCAGACAATTTGTTGGTCACAAGCACTGGCAGTGTGAAGATAGGGGATTTCAGTGTTAGTCAGATTTTTGAGGATGATGATGATCTGCTTTGGAGGTCTCCAGGTACTCCTGTTTTCACTGCACCAGAATGCTGTCAAGGTTCAGCCTACCATGGTCGGGCAGCTGATACATGGGCAGTTGGCGTTACTCTGTATTGTATGATTACTGGTCACTATCCATTTCTAGGAGATACCTTACAGGAAACTTATGATAAGATTGTCAATGATCCGGTGCAAATACCTGACAACATGAACCCCCAACTTGCTGATTTGCTGGAAAGGCTTCTCTGCAAAGATCCAGCAAATCGTATCACCCTGCAGGCTGTAGGTGAGCATCCTTGGGTTGCTGGGGACCAAGGGCCAGTTGTTGAATACTTCTGTAGATGTGGGTTTGGCCGAAGAAAGAGAGATGATCTTAAGGGTGAAGTACAATAGCAAAGGCTTGTTCACAGTTTATCATCCGATGGTTTACTGTAGATAGGCGATGAGTGTGGCTAAACAAAGAAAGTGAGATGATCGACAAACCGTGTTACTCTTTTTTGTGTTCTTCCTCCCTTTACCGATTGACCTGTTGGTTGCTCGCCTCACCACCTCTGCAAGTTTTGTTGCCGAACCGAGGGAGCCCCTGTTTCCATTTTTCTGTAGATCAATTTTGGCTGCTGCAACATGTAAGCTTTTTTCATTTGGTTGTTGAATCCAGTATAGCAACCATTCATAGAAAATATAGTGCAAAAaaa ] [+] EMBL CB096825 [ TCCATTTCTAGGAGATACCTTACAGGAAACTTATGATAAGATTGTCAATGATCCGGTGCAAATACCTGACAACATGAACCCCCAACTTGCTGATTTGCTGGAAAGGCTTCTCTGCAAAGATCCAGCAAATCGTATCACCCTGCAGGCTGTAGGTGAGCATCCTTGGGTTGCTGGGGACCAAGGGCCAGTTGTTGAATACTTCTGTAGATGTGGGTTTGGCCGAAGAAAGAGAGATGATCTTAAGGGAGAAGTACAATAGCAAAGGCTTGTTCACAGTTTATCATCCGATGGTTTACTGTAGATAGGCGATGAGTGTGGCTAAACAAAGAAAGTGAGATGATCGACAAACCGTGTTACTCTTTTTTGTGTTCTTCCTCCCTTTACCGATTGACCTGTTGGTTGCTCGCCTCACCACCTCTGCAAGTTTTGTTGCCGAACCGAGGGAGCCCCTGTTTCCATTTTTCTGTAGATCAATTTTGGCTGCTGCAACATGTAAGCTTTTTTCATTTGGTTGTTGAATCCAGTATAGCAACCATTCATAGAAAATATAGTGCAAAATTCTTTGTGAAGGCTGTAGTCGTTGTTAGCAATTCATGAGCACCGAGTACAGGATGGGTGCAGGCTGATCTGCGGGTACCCTTAAAAGTGAGATTTAGTTTATTTTTAGTTTTAGNTGAACTATGGGTGGGTTGGNAAGATGTGGCCAGCACCATCCTATATTAGATTTTACTTAAGACTCATCCATTTCATGGGNGAGTGAATCTCTTGTCAACGGGAAANTGCTGTAAGgt ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||