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Oryza sativa
cluster # 7351 cluster # 7351       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7351#0 length = 2023 sequences # 4  

consensusID : consensus_7351#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2023
fasta sequence
                              [CTTTGCTTGCCACCACGGTCTCCCTCCCTCCCTCCCCTCTCCCATCCAAACCCCACAAAACCGCGACGAGGAGACCCCGCCGCGACGCAGCCGCAGCTCCGCCGGGGGGGGGGGGGGGGGGAGCAACGCCGCCGTGGAGTCCCCTGCCACCCACGAGGGTTCCTGGTGCCTACTTGGTCTGAATGGCTGACCTGACCGACATGGGCTGCTGTAGTTGTTTTTGCTTTTTAAGGAAGCCTAGGGTGTCTGTAAGTCGACCTCGCGACGCTGATGGCATCCTATCTGAAGACTTGTTGAACCATAAATCTGCGGAGGATCCTGATGGAAGCTTCTACACCGGGGATGATCCTGATAGAAGCTTCTACGACAGGGATGATCTCGATAGAAGCTTCTACAATGGCGATGACCCTGACAGAAGCTTCTATGATGGAGATGATCCTGATCATCTTTATGGAAGTGATGATGGGCAGCCAAGGAAGAGATCTGAAGATATTATACTGTCAAGGGCTCAGAATGGCTTTGCATGTAGAGAAAGCCTAGTTAAGGAGACTAAAAAAGTATTTCGCTCAGAGGATGAAAATGGCAGCAAGATGGTCAACCAATATGTCCACCTGGGGAAGATTGGTTCTGGAAGCTATGGCAAAGTGGTCTTATACCGAAGCATGAAAGATGGAAAGCTTTACGCAGTGAAGGTTTTGAATAAATCTTACATGATGAAAGTACGTGTTGTGCGATCAGAAACTGCCATGACAGATGTTCTTCGGGAAGTATCCATCATGAAAATGTTGGATCATCCTAATATAGTAAATCTCATTGAAGTGATTGATGACCCAAATGCAGATAAATTCTACATGGTTCTTGAGTATGTTGAAGGAAAAATGGTCTGTGACAATGGTTTAGGAGAAGCTACCTCCAGAAGTTACTTGCGCGACATAATCTCTGGTGTTATGTATCTTCATTCTCATAATATTATTCATGGTGATATCAAACCAGACAATTTGTTGGTCACAAGCACTGGCAGTGTGAAGATAGGGGATTTCAGTGTTAGTCAGATTTTTGAGGATGATGATGATCTGCTTTGGAGGTCTCCAGGTACTCCTGTTTTCACTGCACCAGAATGCTGTCAAGGTTCAGCCTACCATGGTCGGGCAGCTGATACATGGGCAGTTGGCGTTACTCTGTATTGTATGATTACTGGTCACTATCCATTTCTAGGAGATACCTTACAGGAAACTTATGATAAGATTGTCAATGATCCGGTGCAAATACCTGACAACATGAACCCCCAACTTGCTGATTTGCTGGAAAGGCTTCTCTGCAAAGATCCAGCAAATCGTATCACCCTGCAGGCTGTAGGTGAGCATCCTTGGGTTGCTGGGGACCAGGGGCCAGTTGTTGAATACTTCTGTAGATGTGGGTTTGGCCGAAGAAAGAGAGATGATCTTAAGGGAGAAGTACAATAGCAAAGGCTTGTTCACAGTTTATCATCCGATGGTTTACTGTAGATAGGCGATGAGTGTGGCTAAACAAAGAAAGTGAGATGATCGACAAACCGTGTTACTCTTTTTTGTGTTCTTCCTCCCTTTACCGATTGACCTGTTGGTTGCTCGCCTCACCACCTCTGCAAGTTTTGTTGCCTAACCGAGGGAGCCCCTGTTTCCATTTTTCTGTAGATCAATTTTGGCTGCTGCAACATGTAAGCTTTTTTCATTTGGTTGTTGAATCCAGTATAGCAACCATTCATAGAAAATATAGTGCAAAATTCTTTGTGAAGGCTGTAGTCGGTGTTAGCAATTCATGAGCACCGAGTACA-GATGGGTGCAGGCTGATCTGCGGGTACCCTTAAAAGTGAGATTTAGTTTA-TTTTAGTTTTAGTTGAACTAT-GGTGGGTTGG-AAGATGTGGCCAGCACCATCCTATATTAGATTTTACTTAAGACTCATCCA-TTCAT-GGTGAGTGAATCTCTTGTCAAC-GGAAATTGCTGTAAGTTACTGCATATTTTCCGTAAGGAAGCTTACTGCAATT]

[+] EMBL AK102350             [CTTTGCTTGCCACCACGGTCTCCCTCCCTCCCTCCCCTCTCCCATCCAAACCCCACAAAACCGCGACGAGGAGACCCCGCCGCGACGCAGCCGCAGCTCCGCCGGGGGGGGGGGGGGGGGGAGCAACGCCGCCGTGGAGTCCCCTGCCACCCACGAGGGTTCCTGGTGCCTACTTGGTCTGAATGGCTGACCTGACCGACATGGGCTGCTGTAGTTGTTTTTGCTTTTTAAGGAAGCCTAGGGTGTCTGTAAGTCGACCTCGCGACGCTGATGGCATCCTATCTGAAGACTTGTTGAACCATAAATCTGCGGAGGATCCTGATGGAAGCTTCTACACCGGGGATGATCCTGATAGAAGCTTCTACGACAGGGATGATCTCGATAGAAGCTTCTACAATGGCGATGACCCTGACAGAAGCTTCTATGATGGAGATGATCCTGATCATCTTTATGGAAGTGATGATGGGCAGCCAAGGAAGAGATCTGAAGATATTATACTGTCAAGGGCTCAGAATGGCTTTGCATGTAGAGAAAGCCTAGTTAAGGAGACTAAAAAAGTATTTCGCTCAGAGGATGAAAATGGCAGCAAGATGGTCAACCAATATGTCCACCTGGGGAAGATTGGTTCTGGAAGCTATGGCAAAGTGGTCTTATACCGAAGCATGAAAGATGGAAAGCTTTACGCAGTGAAGGTTTTGAATAAATCTTACATGATGAAAGTACGTGTTGTGCGATCAGAAACTGCCATGACAGATGTTCTTCGGGAAGTATCCATCATGAAAATGTTGGATCATCCTAATATAGTAAATCTCATTGAAGTGATTGATGACCCAAATGCAGATAAATTCTACATGGTTCTTGAGTATGTTGAAGGAAAAATGGTCTGTGACAATGGTTTAGGAGAAGCTACCTCCAGAAGTTACTTGCGCGACATAATCTCTGGTGTTATGTATCTTCATTCTCATAATATTATTCATGGTGATATCAAACCAGACAATTTGTTGGTCACAAGCACTGGCAGTGTGAAGATAGGGGATTTCAGTGTTAGTCAGATTTTTGAGGATGATGATGATCTGCTTTGGAGGTCTCCAGGTACTCCTGTTTTCACTGCACCAGAATGCTGTCAAGGTTCAGCCTACCATGGTCGGGCAGCTGATACATGGGCAGTTGGCGTTACTCTGTATTGTATGATTACTGGTCACTATCCATTTCTAGGAGATACCTTACAGGAAACTTATGATAAGATTGTCAATGATCCGGTGCAAATACCTGACAACATGAACCCCCAACTTGCTGATTTGCTGGAAAGGCTTCTCTGCAAAGATCCAGCAAATCGTATCACCCTGCAGGCTGTAGGTGAGCATCCTTGGGTTGCTGGGGACCAGGGGCCAGTTGTTGAATACTTCTGTAGATGTGGGTTTGGCCGAAGAAAGAGAGATGATCTTAAGGGAGAAGTACAATAGCAAAGGCTTGTTCACAGTTTATCATCCGATGGTTTACTGTAGATAGGCGATGAGTGTGGCTAAACAAAGAAAGTGAGATGATCGACAAACCGTGTTACTCTTTTTTGTGTTCTTCCTCCCTTTACCGATTGACCTGTTGGTTGCTCGCCTCACCACCTCTGCAAGTTTTGTTGCCTAACCGAGGGAGCCCCTGTTTCCATTTTTCTGTAGATCAATTTTGGCTGCTGCAACATGTAAGCTTTTTTCATTTGGTTGTTGAATCCAGTATAGC                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK060694             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTAAAAAAGTATTTCGCTCAGAGGATGAAAATGGCAGCAAGATGGTCAACCAATATGTCCACCTGGGGAAGATTGGTTCTGGAAGCTATGGCAAAGTGGTCTTATACCGAAGCATGAAAGATGGAAAGCTTTACGCAGTGAAGGTTTTGAATAAATCTTACATGATGAAAGTACGTGTTGTGCGATCAGAAACTGCCATGACAGATGTTCTTCGGGAAGTATCCATCATGAAAATGTTGGATCATCCTAATATAGTAAATCTCATTGAAGTGATTGATGACCCAAATGCAGATAAATTCTACATGGTTCTTGAGTATGTTGAAGGAAAAATGGTCTGTGACAATGGTTTAGGAGAAGCTACCTCCAGAAATTACTTGCGCGACATAATCTCTGGTGTTATGTATCTTCATTCTCATAATATTATTCATGGTGATATCAAACCAGACAATTTGTTGGTCACAAGCACTGGCAGTGTGAAGATAGGGGATTTCAGTGTTAGTCAGATTTTTGAGGATGATGATGATCTGCTTTGGAGGTCTCCAGGTACTCCTGTTTTCACTGCACCAGAATGCTGTCAAGGTTCAGCCTACCATGGTCGGGCAGCTGATACATGGGCAGTTGGCGTTACTCTGTATTGTATGATTACTGGTCACTATCCATTTCTAGGAGATACCTTACAGGAAACTTATGATAAGATTGTCAATGATCCGGTGCAAATACCTGACAACATGAACCCCCAACTTGCTGATTTGCTGGAAAGGCTTCTCTGCAAAGATCCAGCAAATCGTATCACCCTGCAGGCTGTAGGTGAGCATCCTTGGGTTGCTGGGGACCAGGGGCCAGTTGTTGAATACTTCTGTAGATGTGGGTTTGGCCGAAGAAAGAGAGATGATCTTAAGGGAGAAGTACAATAGCAAAGGCTTGTTCACAGTTTATCATCCGATGGTTTACTGTAGATAGGCGATGAGTGTGGCTAAACAAAGAAAGTGAGATGATCGACAAACCGTGTTACTCTTTTTTGTGTTCTTCCTCCCTTTACCGATTGACCTGTTGGTTGCTCGCCTCACCACCTCTGCAAGTTTTGTTGCCTAACCGAGGGAGCCCCTGTTTCCATTTTTCTGTAGATCAATTTTGGCTGCTGCAACATGTAAGCTTTTTTCATTTGGTTGTTGAATCCAGTATAGCAACCATTCATAGAAAATATAGTGCAAAATTCTTTGTGAAGGCTGTAGTCGGTGTTAGCAATTCATGAGCACCGAGTACA GATGGGTGCAGGCTGATCTGCGGGTACCCTTAAAAGTGAGATTTAGTTTA TTTTAGTTTTAGTTGAACTAT GGTGGGTTGG AAGATGTGGCCAGCACCATCCTATATTAGATTTTACTTAAGACTCATCCA TTCAT GGTGAGTGAATCTCTTGTCAAC GGAAATTGCTGTAAGTTACTGCATATTTTCCGTAAGGAAGCTTACTGCAATT]
[+] EMBL CA759163             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCGCGACATAATCTCTGGTGTTATGTATCTTCATTCTCATAATATTATTCATGGTGATATCAAACCAGACAATTTGTTGGTCACAAGCACTGGCAGTGTGAAGATAGGGGATTTCAGTGTTAGTCAGATTTTTGAGGATGATGATGATCTGCTTTGGAGGTCTCCAGGTACTCCTGTTTTCACTGCACCAGAATGCTGTCAAGGTTCAGCCTACCATGGTCGGGCAGCTGATACATGGGCAGTTGGCGTTACTCTGTATTGTATGATTACTGGTCACTATCCATTTCTAGGAGATACCTTACAGGAAACTTATGATAAGATTGTCAATGATCCGGTGCAAATACCTGACAACATGAACCCCCAACTTGCTGATTTGCTGGAAAGGCTTCTCTGCAAAGATCCAGCAAATCGTATCACCCTGCAGGCTGTAGGTGAGCATCCTTGGGTTGCTGGGGACCAAGGGCCAGTTGTTGAATACTTCTGTAGATGTGGGTTTGGCCGAAGAAAGAGAGATGATCTTAAGGGTGAAGTACAATAGCAAAGGCTTGTTCACAGTTTATCATCCGATGGTTTACTGTAGATAGGCGATGAGTGTGGCTAAACAAAGAAAGTGAGATGATCGACAAACCGTGTTACTCTTTTTTGTGTTCTTCCTCCCTTTACCGATTGACCTGTTGGTTGCTCGCCTCACCACCTCTGCAAGTTTTGTTGCCGAACCGAGGGAGCCCCTGTTTCCATTTTTCTGTAGATCAATTTTGGCTGCTGCAACATGTAAGCTTTTTTCATTTGGTTGTTGAATCCAGTATAGCAACCATTCATAGAAAATATAGTGCAAAAaaa                                                                                                                                                                                                                                                                         ]
[+] EMBL CB096825             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCCATTTCTAGGAGATACCTTACAGGAAACTTATGATAAGATTGTCAATGATCCGGTGCAAATACCTGACAACATGAACCCCCAACTTGCTGATTTGCTGGAAAGGCTTCTCTGCAAAGATCCAGCAAATCGTATCACCCTGCAGGCTGTAGGTGAGCATCCTTGGGTTGCTGGGGACCAAGGGCCAGTTGTTGAATACTTCTGTAGATGTGGGTTTGGCCGAAGAAAGAGAGATGATCTTAAGGGAGAAGTACAATAGCAAAGGCTTGTTCACAGTTTATCATCCGATGGTTTACTGTAGATAGGCGATGAGTGTGGCTAAACAAAGAAAGTGAGATGATCGACAAACCGTGTTACTCTTTTTTGTGTTCTTCCTCCCTTTACCGATTGACCTGTTGGTTGCTCGCCTCACCACCTCTGCAAGTTTTGTTGCCGAACCGAGGGAGCCCCTGTTTCCATTTTTCTGTAGATCAATTTTGGCTGCTGCAACATGTAAGCTTTTTTCATTTGGTTGTTGAATCCAGTATAGCAACCATTCATAGAAAATATAGTGCAAAATTCTTTGTGAAGGCTGTAGTCGTTGTTAGCAATTCATGAGCACCGAGTACAGGATGGGTGCAGGCTGATCTGCGGGTACCCTTAAAAGTGAGATTTAGTTTATTTTTAGTTTTAGNTGAACTATGGGTGGGTTGGNAAGATGTGGCCAGCACCATCCTATATTAGATTTTACTTAAGACTCATCCATTTCATGGGNGAGTGAATCTCTTGTCAACGGGAAANTGCTGTAAGgt                                   ]


>consensus_7351#0 CTTTGCTTGCCACCACGGTCTCCCTCCCTCCCTCCCCTCTCCCATCCAAACCCCACAAAA CCGCGACGAGGAGACCCCGCCGCGACGCAGCCGCAGCTCCGCCGGGGGGGGGGGGGGGGG GAGCAACGCCGCCGTGGAGTCCCCTGCCACCCACGAGGGTTCCTGGTGCCTACTTGGTCT GAATGGCTGACCTGACCGACATGGGCTGCTGTAGTTGTTTTTGCTTTTTAAGGAAGCCTA GGGTGTCTGTAAGTCGACCTCGCGACGCTGATGGCATCCTATCTGAAGACTTGTTGAACC ATAAATCTGCGGAGGATCCTGATGGAAGCTTCTACACCGGGGATGATCCTGATAGAAGCT TCTACGACAGGGATGATCTCGATAGAAGCTTCTACAATGGCGATGACCCTGACAGAAGCT TCTATGATGGAGATGATCCTGATCATCTTTATGGAAGTGATGATGGGCAGCCAAGGAAGA GATCTGAAGATATTATACTGTCAAGGGCTCAGAATGGCTTTGCATGTAGAGAAAGCCTAG TTAAGGAGACTAAAAAAGTATTTCGCTCAGAGGATGAAAATGGCAGCAAGATGGTCAACC AATATGTCCACCTGGGGAAGATTGGTTCTGGAAGCTATGGCAAAGTGGTCTTATACCGAA GCATGAAAGATGGAAAGCTTTACGCAGTGAAGGTTTTGAATAAATCTTACATGATGAAAG TACGTGTTGTGCGATCAGAAACTGCCATGACAGATGTTCTTCGGGAAGTATCCATCATGA AAATGTTGGATCATCCTAATATAGTAAATCTCATTGAAGTGATTGATGACCCAAATGCAG ATAAATTCTACATGGTTCTTGAGTATGTTGAAGGAAAAATGGTCTGTGACAATGGTTTAG GAGAAGCTACCTCCAGAAGTTACTTGCGCGACATAATCTCTGGTGTTATGTATCTTCATT CTCATAATATTATTCATGGTGATATCAAACCAGACAATTTGTTGGTCACAAGCACTGGCA GTGTGAAGATAGGGGATTTCAGTGTTAGTCAGATTTTTGAGGATGATGATGATCTGCTTT GGAGGTCTCCAGGTACTCCTGTTTTCACTGCACCAGAATGCTGTCAAGGTTCAGCCTACC ATGGTCGGGCAGCTGATACATGGGCAGTTGGCGTTACTCTGTATTGTATGATTACTGGTC ACTATCCATTTCTAGGAGATACCTTACAGGAAACTTATGATAAGATTGTCAATGATCCGG TGCAAATACCTGACAACATGAACCCCCAACTTGCTGATTTGCTGGAAAGGCTTCTCTGCA AAGATCCAGCAAATCGTATCACCCTGCAGGCTGTAGGTGAGCATCCTTGGGTTGCTGGGG ACCAGGGGCCAGTTGTTGAATACTTCTGTAGATGTGGGTTTGGCCGAAGAAAGAGAGATG ATCTTAAGGGAGAAGTACAATAGCAAAGGCTTGTTCACAGTTTATCATCCGATGGTTTAC TGTAGATAGGCGATGAGTGTGGCTAAACAAAGAAAGTGAGATGATCGACAAACCGTGTTA CTCTTTTTTGTGTTCTTCCTCCCTTTACCGATTGACCTGTTGGTTGCTCGCCTCACCACC TCTGCAAGTTTTGTTGCCTAACCGAGGGAGCCCCTGTTTCCATTTTTCTGTAGATCAATT TTGGCTGCTGCAACATGTAAGCTTTTTTCATTTGGTTGTTGAATCCAGTATAGCAACCAT TCATAGAAAATATAGTGCAAAATTCTTTGTGAAGGCTGTAGTCGGTGTTAGCAATTCATG AGCACCGAGTACAGATGGGTGCAGGCTGATCTGCGGGTACCCTTAAAAGTGAGATTTAGT TTATTTTAGTTTTAGTTGAACTATGGTGGGTTGGAAGATGTGGCCAGCACCATCCTATAT TAGATTTTACTTAAGACTCATCCATTCATGGTGAGTGAATCTCTTGTCAACGGAAATTGC TGTAAGTTACTGCATATTTTCCGTAAGGAAGCTTACTGCAATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)