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Oryza sativa
cluster # 7371 cluster # 7371       Sequences # 4       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7371#0 length = 2809 sequences # 1  
 consensus_7371#1 length = 747 sequences # 2  
consensus_7371#2 length = 634 sequences # 1  
consensusID : consensus_7371#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2809
fasta sequence 
                              [CGGTGATGGTGGGCCGGAACCTTGGGGGCCAACGGACGTTCCGAAGGCTCGCCACAAAGGCTCGACAGCCGGCACCGCCAACCGGGGACACGGGGGGCCGGCCCCCGTGCCCGGACCGAAGTGGCGCTCCGGACGAGGAAGCGCCCTCCGTTGCGTGGGCGGCGTGACGAGCGTCGCGCCGGCGCTCGATATCGAGGCGGGCATCCGGCCCCCCACACACATCTTCTTGGGTTGGAGGCGTTGACGAGGGAATGGCGGACGAACGGCGGGTAACGGCCGCCGCTCGCCGCGCCCTCCGCCTCGACGACTTGGAGCTGGCGGCGGCAGCGCCAGAGGCCTCGGTGGCGGAGGACCGCCCGCCGGCGCCTAGTCGCTGCTGCGCCGTCATGACCAAGTCGGCCACGTCATCCAGCCAACGTCGGGCTGGAGTCTCTGGATCGGGGACGACGGGTGGGTGACACAGGAGCGCGCCCGCAGCCTGGAGCGCGCCCTGGGGCGTGCCGCCATCGCCGTAGACGAGGCGGCGACGTGCCCCGTCTCGCCGTCCTCCCCCGTCGCCCGCGAGTGGCGAAGTCGCGGATCCTCCGACCTCCCTGAGCGCCTCCCCCCGCCCAGGATTTCGGCGAGAGGGGGACGGTGGGGTGCGAGCCCGACGGCGCGGGTTCTGCTCCCCGTCGTCACCGCTAGCTTTCGGAGAGAGGTTGTGCGCCACTGCCCGTTCGGCCATTGGGCTGAGCGGGCGAAGCTTGGCGCACACGAAAGAGGACGAGGGCTTCGAAAGACACGCGCGCCCCCTACCTGGCGCGCCAGATGACGGAGCGTGGGGCTCCTCACCGGGAGACCGCGCAGGCCCCCCTTTGCCGGTTCGGCCGGGGGCGCTAAGTGAGGTTCTTCGCCCTCGATCTGAGGAATGTCAGCGAGAAGAAGCGCACAAGACACGGGTGACGTAGACAGGTTCGGGCCGCTAAGAAGCGTAATACCCTACTCCTGTGTTCTGGTGGATCTGTGTATGAAGGAATGCAGAGAGCTCCAGAGCCAGAGAGCTCGAGAGCGAGAGAGAGTTCAGGCTCTTCGATCCAGTGGCCTGCCTTCTTCCCCCCTCTTAGGCCTGGGCCTCCTTTTTTTTATCTGGTTAGGGGTCACCACATGGGCCTCTAGCTGCCTAAGAAAAGAAACATGCTTTTTACAATTAGGGCTCATCTACAGCCGGAAATGACCTCTGACAAGCAGTACACACGCCTCCTGCTCCGCTCGTCAGCTCTCCCGGTGGACGCCCGTTTCAACCTTCATTCAATGGCCAGCGACTTTCTTGCCATGCTTGCGCTGAAGCCTGGAATGGATCTGACCGGGACTGACATACCAACTCCAGGAGTCAGCACGCCAGCTCCGGCTAGAGACGAGAGCCAGGAAGCTCTCATCATTCCGACGGGACGGGACGAGGCGTGCGACAGGCCGCCTGTTGCCACCTAACCCGCGATCTGACCGGTCTGTGACCGGTCACATACCGCGACTGGTCACAGACCGGATAAGCATGCGCTGCGCCGCATTGAATGCGGCGTGGCGCGCTCGTCTAACCCGCTATAAATGCGGTTAGGTGAGCGCCGCTGTGCTCATCTGACCCACACACGTGGCGCCAACACCACAGGGGTCGGGGTGCCCCAGTCCTCGGGGCCGAAACGGGAGCGGCCTGACCCCTCGGGGAGACAGAGAGAGGGGTGGCCACGTCACCGTCGGGCCCGACCCCCCCGAGGGGGTCGGGCCACGTGAGTGATCGCGGCTACCCAAGCCTCTAGTCACGATACCCCCGGCCCCATGTCACCGACACAAGTCGAGTTAGAACTCGAGTTGGATTGGAGACAAAAACTTGAGCTGGAAAAAGAACAGTTGAGAGGAAAGATAGAGGTAATGAAAATGATGGGATCTGAGGAAGATGGAACATTGAAGGAACTTGATGAGTTGCGTACAAAGCTGGAAGAAAAAGATGATGACATGGAGTCCATGGATTCTCTTAACCAGGCCCTGATTATTAAGAATCAAAGGACCATTGATGAGCTGAAAGAGGCCAAGAAAGGCCAAGAAAGAACTGATAAATGTATACGTTTTATCGCTATTACTTTGCTATGAACCTATGATTGTCATAATTCATGTATCCGGCTATCCGCTCATCCTTTTCCGAGGACCATTCACTTGCTGTGCAGGGATTAGAAAAAATGGCAGGAGTTCGATCCATTATAGGTGTGAAGAGAATGGGTGAGCTTGATCAGAAGGCCTTTTATAATGCATGCAAAAATAAAATGCCAAATAATAAGATGAAATTGGCACTTGTTTGTTCAAAATGGGAAGATGAGATAACAAAACCAGAATGGCATCCTTTCAAAGTTATCGAGACTGCTGGACAGACAAAGGAAATAATCAAGGAAGATGATGGGAAGCTGCAGGCTTTGAGGGCGCAATATGGGGATGAGGCTTGCAACGTTGTCGTTAAGGCCCTTGTTGAAATGAATGAATACAATCCCAGTGGCATGTATCCTGTCCCTGAGCTGTGGAACTTCAAGCAGAACCGGAGTGCCCCTATGCCAGAGGCAGCAAGTTACTTGCTGAAGCAGTGGAAGACGCACAAGAAGAGAAACACCTGAGTGAGATCTGGACCCTGCTCGTGGTATCGTTATCTGTAGAATTCGTCCCCTGACATGTAGTTGGATGAGGCTGCCTATTAGTGAGGCAAGTATTCATATCTCCCAGACATTGTCTGTCTCTACTGGCGACATTGTAGTGCACATTTGAGAGTTGAGGCTATATGAATATTCGC]

[+] EMBL AK107535             [CGGTGATGGTGGGCCGGAACCTTGGGGGCCAACGGACGTTCCGAAGGCTCGCCACAAAGGCTCGACAGCCGGCACCGCCAACCGGGGACACGGGGGGCCGGCCCCCGTGCCCGGACCGAAGTGGCGCTCCGGACGAGGAAGCGCCCTCCGTTGCGTGGGCGGCGTGACGAGCGTCGCGCCGGCGCTCGATATCGAGGCGGGCATCCGGCCCCCCACACACATCTTCTTGGGTTGGAGGCGTTGACGAGGGAATGGCGGACGAACGGCGGGTAACGGCCGCCGCTCGCCGCGCCCTCCGCCTCGACGACTTGGAGCTGGCGGCGGCAGCGCCAGAGGCCTCGGTGGCGGAGGACCGCCCGCCGGCGCCTAGTCGCTGCTGCGCCGTCATGACCAAGTCGGCCACGTCATCCAGCCAACGTCGGGCTGGAGTCTCTGGATCGGGGACGACGGGTGGGTGACACAGGAGCGCGCCCGCAGCCTGGAGCGCGCCCTGGGGCGTGCCGCCATCGCCGTAGACGAGGCGGCGACGTGCCCCGTCTCGCCGTCCTCCCCCGTCGCCCGCGAGTGGCGAAGTCGCGGATCCTCCGACCTCCCTGAGCGCCTCCCCCCGCCCAGGATTTCGGCGAGAGGGGGACGGTGGGGTGCGAGCCCGACGGCGCGGGTTCTGCTCCCCGTCGTCACCGCTAGCTTTCGGAGAGAGGTTGTGCGCCACTGCCCGTTCGGCCATTGGGCTGAGCGGGCGAAGCTTGGCGCACACGAAAGAGGACGAGGGCTTCGAAAGACACGCGCGCCCCCTACCTGGCGCGCCAGATGACGGAGCGTGGGGCTCCTCACCGGGAGACCGCGCAGGCCCCCCTTTGCCGGTTCGGCCGGGGGCGCTAAGTGAGGTTCTTCGCCCTCGATCTGAGGAATGTCAGCGAGAAGAAGCGCACAAGACACGGGTGACGTAGACAGGTTCGGGCCGCTAAGAAGCGTAATACCCTACTCCTGTGTTCTGGTGGATCTGTGTATGAAGGAATGCAGAGAGCTCCAGAGCCAGAGAGCTCGAGAGCGAGAGAGAGTTCAGGCTCTTCGATCCAGTGGCCTGCCTTCTTCCCCCCTCTTAGGCCTGGGCCTCCTTTTTTTTATCTGGTTAGGGGTCACCACATGGGCCTCTAGCTGCCTAAGAAAAGAAACATGCTTTTTACAATTAGGGCTCATCTACAGCCGGAAATGACCTCTGACAAGCAGTACACACGCCTCCTGCTCCGCTCGTCAGCTCTCCCGGTGGACGCCCGTTTCAACCTTCATTCAATGGCCAGCGACTTTCTTGCCATGCTTGCGCTGAAGCCTGGAATGGATCTGACCGGGACTGACATACCAACTCCAGGAGTCAGCACGCCAGCTCCGGCTAGAGACGAGAGCCAGGAAGCTCTCATCATTCCGACGGGACGGGACGAGGCGTGCGACAGGCCGCCTGTTGCCACCTAACCCGCGATCTGACCGGTCTGTGACCGGTCACATACCGCGACTGGTCACAGACCGGATAAGCATGCGCTGCGCCGCATTGAATGCGGCGTGGCGCGCTCGTCTAACCCGCTATAAATGCGGTTAGGTGAGCGCCGCTGTGCTCATCTGACCCACACACGTGGCGCCAACACCACAGGGGTCGGGGTGCCCCAGTCCTCGGGGCCGAAACGGGAGCGGCCTGACCCCTCGGGGAGACAGAGAGAGGGGTGGCCACGTCACCGTCGGGCCCGACCCCCCCGAGGGGGTCGGGCCACGTGAGTGATCGCGGCTACCCAAGCCTCTAGTCACGATACCCCCGGCCCCATGTCACCGACACAAGTCGAGTTAGAACTCGAGTTGGATTGGAGACAAAAACTTGAGCTGGAAAAAGAACAGTTGAGAGGAAAGATAGAGGTAATGAAAATGATGGGATCTGAGGAAGATGGAACATTGAAGGAACTTGATGAGTTGCGTACAAAGCTGGAAGAAAAAGATGATGACATGGAGTCCATGGATTCTCTTAACCAGGCCCTGATTATTAAGAATCAAAGGACCATTGATGAGCTGAAAGAGGCCAAGAAAGGCCAAGAAAGAACTGATAAATGTATACGTTTTATCGCTATTACTTTGCTATGAACCTATGATTGTCATAATTCATGTATCCGGCTATCCGCTCATCCTTTTCCGAGGACCATTCACTTGCTGTGCAGGGATTAGAAAAAATGGCAGGAGTTCGATCCATTATAGGTGTGAAGAGAATGGGTGAGCTTGATCAGAAGGCCTTTTATAATGCATGCAAAAATAAAATGCCAAATAATAAGATGAAATTGGCACTTGTTTGTTCAAAATGGGAAGATGAGATAACAAAACCAGAATGGCATCCTTTCAAAGTTATCGAGACTGCTGGACAGACAAAGGAAATAATCAAGGAAGATGATGGGAAGCTGCAGGCTTTGAGGGCGCAATATGGGGATGAGGCTTGCAACGTTGTCGTTAAGGCCCTTGTTGAAATGAATGAATACAATCCCAGTGGCATGTATCCTGTCCCTGAGCTGTGGAACTTCAAGCAGAACCGGAGTGCCCCTATGCCAGAGGCAGCAAGTTACTTGCTGAAGCAGTGGAAGACGCACAAGAAGAGAAACACCTGAGTGAGATCTGGACCCTGCTCGTGGTATCGTTATCTGTAGAATTCGTCCCCTGACATGTAGTTGGATGAGGCTGCCTATTAGTGAGGCAAGTATTCATATCTCCCAGACATTGTCTGTCTCTACTGGCGACATTGTAGTGCACATTTGAGAGTTGAGGCTATATGAATATTCGC]




>consensus_7371#0
CGGTGATGGTGGGCCGGAACCTTGGGGGCCAACGGACGTTCCGAAGGCTCGCCACAAAGG
CTCGACAGCCGGCACCGCCAACCGGGGACACGGGGGGCCGGCCCCCGTGCCCGGACCGAA
GTGGCGCTCCGGACGAGGAAGCGCCCTCCGTTGCGTGGGCGGCGTGACGAGCGTCGCGCC
GGCGCTCGATATCGAGGCGGGCATCCGGCCCCCCACACACATCTTCTTGGGTTGGAGGCG
TTGACGAGGGAATGGCGGACGAACGGCGGGTAACGGCCGCCGCTCGCCGCGCCCTCCGCC
TCGACGACTTGGAGCTGGCGGCGGCAGCGCCAGAGGCCTCGGTGGCGGAGGACCGCCCGC
CGGCGCCTAGTCGCTGCTGCGCCGTCATGACCAAGTCGGCCACGTCATCCAGCCAACGTC
GGGCTGGAGTCTCTGGATCGGGGACGACGGGTGGGTGACACAGGAGCGCGCCCGCAGCCT
GGAGCGCGCCCTGGGGCGTGCCGCCATCGCCGTAGACGAGGCGGCGACGTGCCCCGTCTC
GCCGTCCTCCCCCGTCGCCCGCGAGTGGCGAAGTCGCGGATCCTCCGACCTCCCTGAGCG
CCTCCCCCCGCCCAGGATTTCGGCGAGAGGGGGACGGTGGGGTGCGAGCCCGACGGCGCG
GGTTCTGCTCCCCGTCGTCACCGCTAGCTTTCGGAGAGAGGTTGTGCGCCACTGCCCGTT
CGGCCATTGGGCTGAGCGGGCGAAGCTTGGCGCACACGAAAGAGGACGAGGGCTTCGAAA
GACACGCGCGCCCCCTACCTGGCGCGCCAGATGACGGAGCGTGGGGCTCCTCACCGGGAG
ACCGCGCAGGCCCCCCTTTGCCGGTTCGGCCGGGGGCGCTAAGTGAGGTTCTTCGCCCTC
GATCTGAGGAATGTCAGCGAGAAGAAGCGCACAAGACACGGGTGACGTAGACAGGTTCGG
GCCGCTAAGAAGCGTAATACCCTACTCCTGTGTTCTGGTGGATCTGTGTATGAAGGAATG
CAGAGAGCTCCAGAGCCAGAGAGCTCGAGAGCGAGAGAGAGTTCAGGCTCTTCGATCCAG
TGGCCTGCCTTCTTCCCCCCTCTTAGGCCTGGGCCTCCTTTTTTTTATCTGGTTAGGGGT
CACCACATGGGCCTCTAGCTGCCTAAGAAAAGAAACATGCTTTTTACAATTAGGGCTCAT
CTACAGCCGGAAATGACCTCTGACAAGCAGTACACACGCCTCCTGCTCCGCTCGTCAGCT
CTCCCGGTGGACGCCCGTTTCAACCTTCATTCAATGGCCAGCGACTTTCTTGCCATGCTT
GCGCTGAAGCCTGGAATGGATCTGACCGGGACTGACATACCAACTCCAGGAGTCAGCACG
CCAGCTCCGGCTAGAGACGAGAGCCAGGAAGCTCTCATCATTCCGACGGGACGGGACGAG
GCGTGCGACAGGCCGCCTGTTGCCACCTAACCCGCGATCTGACCGGTCTGTGACCGGTCA
CATACCGCGACTGGTCACAGACCGGATAAGCATGCGCTGCGCCGCATTGAATGCGGCGTG
GCGCGCTCGTCTAACCCGCTATAAATGCGGTTAGGTGAGCGCCGCTGTGCTCATCTGACC
CACACACGTGGCGCCAACACCACAGGGGTCGGGGTGCCCCAGTCCTCGGGGCCGAAACGG
GAGCGGCCTGACCCCTCGGGGAGACAGAGAGAGGGGTGGCCACGTCACCGTCGGGCCCGA
CCCCCCCGAGGGGGTCGGGCCACGTGAGTGATCGCGGCTACCCAAGCCTCTAGTCACGAT
ACCCCCGGCCCCATGTCACCGACACAAGTCGAGTTAGAACTCGAGTTGGATTGGAGACAA
AAACTTGAGCTGGAAAAAGAACAGTTGAGAGGAAAGATAGAGGTAATGAAAATGATGGGA
TCTGAGGAAGATGGAACATTGAAGGAACTTGATGAGTTGCGTACAAAGCTGGAAGAAAAA
GATGATGACATGGAGTCCATGGATTCTCTTAACCAGGCCCTGATTATTAAGAATCAAAGG
ACCATTGATGAGCTGAAAGAGGCCAAGAAAGGCCAAGAAAGAACTGATAAATGTATACGT
TTTATCGCTATTACTTTGCTATGAACCTATGATTGTCATAATTCATGTATCCGGCTATCC
GCTCATCCTTTTCCGAGGACCATTCACTTGCTGTGCAGGGATTAGAAAAAATGGCAGGAG
TTCGATCCATTATAGGTGTGAAGAGAATGGGTGAGCTTGATCAGAAGGCCTTTTATAATG
CATGCAAAAATAAAATGCCAAATAATAAGATGAAATTGGCACTTGTTTGTTCAAAATGGG
AAGATGAGATAACAAAACCAGAATGGCATCCTTTCAAAGTTATCGAGACTGCTGGACAGA
CAAAGGAAATAATCAAGGAAGATGATGGGAAGCTGCAGGCTTTGAGGGCGCAATATGGGG
ATGAGGCTTGCAACGTTGTCGTTAAGGCCCTTGTTGAAATGAATGAATACAATCCCAGTG
GCATGTATCCTGTCCCTGAGCTGTGGAACTTCAAGCAGAACCGGAGTGCCCCTATGCCAG
AGGCAGCAAGTTACTTGCTGAAGCAGTGGAAGACGCACAAGAAGAGAAACACCTGAGTGA
GATCTGGACCCTGCTCGTGGTATCGTTATCTGTAGAATTCGTCCCCTGACATGTAGTTGG
ATGAGGCTGCCTATTAGTGAGGCAAGTATTCATATCTCCCAGACATTGTCTGTCTCTACT
GGCGACATTGTAGTGCACATTTGAGAGTTGAGGCTATATGAATATTCGC

consensusID : consensus_7371#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 747
fasta sequence 
                              [GAACTTATTTGTGCATAAAATCCTCGCCCTGGAATCAGCCGAGGTACACAAACTAACAATTTAATATACAAATCCATCATAATAATAACGTTACATACTTACAAAAGAAAAAAAACAGCAGCGGAATAATGGTCTAGCAATGGCTTCAGCTCTGACGGAGCGTGGGGCTCCTCACCGGGAGACCGCGCAGGCCCCCCTTTGCCGGTTCGGCCGGGGGCGCTAAGTGAGGTTCTTCGCCCTCGATCTGAGGAACGTCAGCGAGAGAGGAAGCGCACAAGACACGGGCGACGTAGACAGGTTCGGGCCGCTGAGAAGCGTAACACCCTACTCCTGTGTTCTGGTGGATCTGTGTCTGAAGGAATACAGAGAGCCGGAGAGCGAGAGAGAGTTCAGGCTCTAGAACCCGTTCGCCAGAGTCCCACAACCCCCCTTCCTGCTCCTTTTTCCCTCCTCTTCTTTTTTCCTCCCTCTAGGCCTGGGCCTCCTTTTTATCTGGTCAGGGGTCACCACATGGGCCTCTCGCTGCCTAAGAAAGGAAACATGCTTTTTACAATGAGGGCTAGTCTACAGCCGGAAATGACTTCTGACAAGCAGAGCACACGCCTCCTGCCCCGCTCGCCCGCTTTTCCCGTGGACGCCCATTTCAACCTTTATTTAATGGCCAGCGACTTCCTTGCCATACTTGCGCTGAAGCCTGGAATGAATCTGACCGGGACTGACATACCAACTCCAGGAGTCAGCACGCCG]

[+] EMBL CB676705             [GAACTTATTTGTGCATAAAATCCTCGCCCTGGAATCAGCCGAGGTACACAAACTAACAATTTAATATACAAATCCATCATAATAATAACGTTACATACTTACAAAAGAAAAAAAACAGCAGCGGAATAATGGTCTAGCAATGGCTTCAGCTCTGACGGAGCGTGGGGCTCCTCACCGGGAGACCGCGCAGGCCCCCCTTTGCCGGTTCGGCCGGGGGCGCTAAGTGAGGTTCTTCGCCCTCGATCTGAGGAACGTCAGCGAGAGAGGAAGCGCACAAGACACGGGCGACGTAGACAGGTTCGGGCCGCTGAGAAGCGTAACACCCTACTCCTGTGTTCTGGTGGATCTGTGTCTGAAGGAATACAGAGAGCCGGAGAGCGAGAGAGAGTTCAGGCTCTAGAACCCGTTCGCCAGAGTCCCACAACCCCCCTTCCTGCTCCTTTTTCCCTCCTCTTCTTTTTTCCTCCCTCTAGGCCTGGGCCTCCTTTTTATCTGGTCAGGGGTCACCACATGGGCCTCTCGCTGCCTAAGAAAGGAAACATGCTTTTTACAATGAGGGCTAGTCTACAGCCGGAAATGACTTCTGACAAGCAGAGCACACGCCTCCTGCCCCGCTCGCCCGCTTTTCCCGTGGACGCCCATTTCAACCTTTATTTAATGGCCAGCGACTTCCTTGCCATACTTGCGCTGAAGCCTGGAATGAATCTGACCGGGACTGACATACCAACTCCAGGAGTCAGCACGCCG]
[+] EMBL CB676780             [      ATTTGTGCATAAAATCCTCGCCCTTGAATCAGCCGAGGTACACAAACTAACAATTTAATATACAAATCCATCATAATAATAACGTTACATACTTACAAAAGAAAAAAAACAGCAGCGGAATAATGGTCTAGCAATGGCTTCAGCTCTGACGGAGCGTGGGGCTCCTCACCGGGAGACCGCGCAGGCCCCCCTTTGCCGGTTCGGCCGGGGGCGCTAAGTGAGGTTCTTCGCCCTCGATCTGAGGAACGTCAGCGAGAGAGGAAGCGCACAAGACACGGGCGACGTAGACAGGTTCGGGCCGCTGAGAAGCGTAACACCCTACTCCTGTGTTCTGGTGGATCTGTGTCTGAAGGAATACAGAGAGCCGGAGAGCGAGAGAGAGTTCAGGCTCTAAAACCCGTTCGCCAGAGTCCCACAACCCCCCTTCCTGCTCCTTTTTCCCTCCTCTTCTTTTTTCCTCCCTCTAGGCCTGGGCCTCCTTTTTATCTGGTCAGGGGTCACCACATGGGCCTCTCGCTGCCTAAGAAAGGAAACATGCTTTTTACAATGAGGGCTAGTCTACAGCCGGAAATGACTTCTGACAAGCAGAGCACACGCCTCCTGCCCCGCTCGCCCGCTTTTCCCGTGGACGCCCATTTCAACCTTTATTTAATGGCCAGCGACTTCCTTGCCATACTTGCGCTGAAGCCTGGAATGAATCTGACCGGGACTGACATACCAACTCCA               ]




>consensus_7371#1
GAACTTATTTGTGCATAAAATCCTCGCCCTGGAATCAGCCGAGGTACACAAACTAACAAT
TTAATATACAAATCCATCATAATAATAACGTTACATACTTACAAAAGAAAAAAAACAGCA
GCGGAATAATGGTCTAGCAATGGCTTCAGCTCTGACGGAGCGTGGGGCTCCTCACCGGGA
GACCGCGCAGGCCCCCCTTTGCCGGTTCGGCCGGGGGCGCTAAGTGAGGTTCTTCGCCCT
CGATCTGAGGAACGTCAGCGAGAGAGGAAGCGCACAAGACACGGGCGACGTAGACAGGTT
CGGGCCGCTGAGAAGCGTAACACCCTACTCCTGTGTTCTGGTGGATCTGTGTCTGAAGGA
ATACAGAGAGCCGGAGAGCGAGAGAGAGTTCAGGCTCTAGAACCCGTTCGCCAGAGTCCC
ACAACCCCCCTTCCTGCTCCTTTTTCCCTCCTCTTCTTTTTTCCTCCCTCTAGGCCTGGG
CCTCCTTTTTATCTGGTCAGGGGTCACCACATGGGCCTCTCGCTGCCTAAGAAAGGAAAC
ATGCTTTTTACAATGAGGGCTAGTCTACAGCCGGAAATGACTTCTGACAAGCAGAGCACA
CGCCTCCTGCCCCGCTCGCCCGCTTTTCCCGTGGACGCCCATTTCAACCTTTATTTAATG
GCCAGCGACTTCCTTGCCATACTTGCGCTGAAGCCTGGAATGAATCTGACCGGGACTGAC
ATACCAACTCCAGGAGTCAGCACGCCG

consensusID : consensus_7371#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 634
fasta sequence 
                              [ATTGGTGAGCTGAAAGAGCCCAAGAAAGANCTGATAAATGGATTAGAAAAAATGGCAGGAGTTCGATCCATCATAGGTGTGAAGAGAATGGGTGAGCTTGATTAGAAGACCTTTTATAATGCATGCAAAAATAAAATGCCAAATGATAAGCTGGAATTGGCACTTGTTTGTTCAAAATGGGAAGATGAGATACCAAAACCAGAATGGCATCCTTTCAAAGTTATCGAGACTGCTGGACAGATAAAGGAAATAATCAAGGAAGATGATGGGAAGCTACAGGCTTTTAGGGCGCAATATGGGGATGAGGCTTGCAACGTTGTCGTTAAGGCCCTTGTTGAAATGAATGAATACAATCCCGGTGGCAGGTATCCTGTCCCTGAGCTGTGGAACTTCAAGCAGAACCGGAGTGCCCCTATGCCAGAGGCAGCAAGTTACTTGCTAAAGCAGTGGAAGACGCCCAAGAAGAGAAACACCTGAGTGAGATCTGGACCCTGCTCGTGGTATCGTTATCTGTAGAATTCGTCCCTGACATGTAGTTGGATGAGGCTGCCTATTAGTGAAGCAAGTATTCATATCTCCCAGACATTGTCTGTCACTACTGGCGACATTGTAGTGCACATTTGAGAGGTTGGGG]

[-] EMBL CA763114             [ATTGGTGAGCTGAAAGAGCCCAAGAAAGANCTGATAAATGGATTAGAAAAAATGGCAGGAGTTCGATCCATCATAGGTGTGAAGAGAATGGGTGAGCTTGATTAGAAGACCTTTTATAATGCATGCAAAAATAAAATGCCAAATGATAAGCTGGAATTGGCACTTGTTTGTTCAAAATGGGAAGATGAGATACCAAAACCAGAATGGCATCCTTTCAAAGTTATCGAGACTGCTGGACAGATAAAGGAAATAATCAAGGAAGATGATGGGAAGCTACAGGCTTTTAGGGCGCAATATGGGGATGAGGCTTGCAACGTTGTCGTTAAGGCCCTTGTTGAAATGAATGAATACAATCCCGGTGGCAGGTATCCTGTCCCTGAGCTGTGGAACTTCAAGCAGAACCGGAGTGCCCCTATGCCAGAGGCAGCAAGTTACTTGCTAAAGCAGTGGAAGACGCCCAAGAAGAGAAACACCTGAGTGAGATCTGGACCCTGCTCGTGGTATCGTTATCTGTAGAATTCGTCCCTGACATGTAGTTGGATGAGGCTGCCTATTAGTGAAGCAAGTATTCATATCTCCCAGACATTGTCTGTCACTACTGGCGACATTGTAGTGCACATTTGAGAGGTTGGGG]




>consensus_7371#2
ATTGGTGAGCTGAAAGAGCCCAAGAAAGANCTGATAAATGGATTAGAAAAAATGGCAGGA
GTTCGATCCATCATAGGTGTGAAGAGAATGGGTGAGCTTGATTAGAAGACCTTTTATAAT
GCATGCAAAAATAAAATGCCAAATGATAAGCTGGAATTGGCACTTGTTTGTTCAAAATGG
GAAGATGAGATACCAAAACCAGAATGGCATCCTTTCAAAGTTATCGAGACTGCTGGACAG
ATAAAGGAAATAATCAAGGAAGATGATGGGAAGCTACAGGCTTTTAGGGCGCAATATGGG
GATGAGGCTTGCAACGTTGTCGTTAAGGCCCTTGTTGAAATGAATGAATACAATCCCGGT
GGCAGGTATCCTGTCCCTGAGCTGTGGAACTTCAAGCAGAACCGGAGTGCCCCTATGCCA
GAGGCAGCAAGTTACTTGCTAAAGCAGTGGAAGACGCCCAAGAAGAGAAACACCTGAGTG
AGATCTGGACCCTGCTCGTGGTATCGTTATCTGTAGAATTCGTCCCTGACATGTAGTTGG
ATGAGGCTGCCTATTAGTGAAGCAAGTATTCATATCTCCCAGACATTGTCTGTCACTACT
GGCGACATTGTAGTGCACATTTGAGAGGTTGGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7371#0      CGGTGATGGTGGGCCGGAACCTTGGGGGCCAACGGACGTTCCGAAGGCTCGCCACAAAGG 60
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CTCGACAGCCGGCACCGCCAACCGGGGACACGGGGGGCCGGCCCCCGTGCCCGGACCGAA 120
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GTGGCGCTCCGGACGAGGAAGCGCCCTCCGTTGCGTGGGCGGCGTGACGAGCGTCGCGCC 180
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GGCGCTCGATATCGAGGCGGGCATCCGGCCCCCCACACACATCTTCTTGGGTTGGAGGCG 240
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      TTGACGAGGGAATGGCGGACGAACGGCGGGTAACGGCCGCCGCTCGCCGCGCCCTCCGCC 300
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      TCGACGACTTGGAGCTGGCGGCGGCAGCGCCAGAGGCCTCGGTGGCGGAGGACCGCCCGC 360
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CGGCGCCTAGTCGCTGCTGCGCCGTCATGACCAAGTCGGCCACGTCATCCAGCCAACGTC 420
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GGGCTGGAGTCTCTGGATCGGGGACGACGGGTGGGTGACACAGGAGCGCGCCCGCAGCCT 480
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GGAGCGCGCCCTGGGGCGTGCCGCCATCGCCGTAGACGAGGCGGCGACGTGCCCCGTCTC 540
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GCCGTCCTCCCCCGTCGCCCGCGAGTGGCGAAGTCGCGGATCCTCCGACCTCCCTGAGCG 600
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CCTCCCCCCGCCCAGGATTTCGGCGAGAGGGGGACGGTGGGGTGCGAGCCCGACGGCGCG 660
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GGTTCTGCTCCCCGTCGTCACCGCTAGCTTTCGGAGAGAGGTTGTGCGCCACTGCCCGTT 720
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CGGCCATTGGGCTGAGCGGGCGAAGCTTGGCGCACACGAAAGAGGACGAGGGCTTCGAAA 780
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GACACGCGCGCCCCCTACCTGGCGCGCCAGATGACGGAGCGTGGGGCTCCTCACCGGGAG 840
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      ACCGCGCAGGCCCCCCTTTGCCGGTTCGGCCGGGGGCGCTAAGTGAGGTTCTTCGCCCTC 900
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GATCTGAGGAATGTCAGCGAGAAGAAGCGCACAAGACACGGGTGACGTAGACAGGTTCGG 960
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GCCGCTAAGAAGCGTAATACCCTACTCCTGTGTTCTGGTGGATCTGTGTATGAAGGAATG 1020
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CAGAGAGCTCCAGAGCCAGAGAGCTCGAGAGCGAGAGAGAGTTCAGGCTCTTCGATCCAG 1080
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      TGGCCTGCCTTCTTCCCCCCTCTTAGGCCTGGGCCTCCTTTTTTTTATCTGGTTAGGGGT 1140
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CACCACATGGGCCTCTAGCTGCCTAAGAAAAGAAACATGCTTTTTACAATTAGGGCTCAT 1200
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CTACAGCCGGAAATGACCTCTGACAAGCAGTACACACGCCTCCTGCTCCGCTCGTCAGCT 1260
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CTCCCGGTGGACGCCCGTTTCAACCTTCATTCAATGGCCAGCGACTTTCTTGCCATGCTT 1320
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GCGCTGAAGCCTGGAATGGATCTGACCGGGACTGACATACCAACTCCAGGAGTCAGCACG 1380
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CCAGCTCCGGCTAGAGACGAGAGCCAGGAAGCTCTCATCATTCCGACGGGACGGGACGAG 1440
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GCGTGCGACAGGCCGCCTGTTGCCACCTAACCCGCGATCTGACCGGTCTGTGACCGGTCA 1500
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CATACCGCGACTGGTCACAGACCGGATAAGCATGCGCTGCGCCGCATTGAATGCGGCGTG 1560
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GCGCGCTCGTCTAACCCGCTATAAATGCGGTTAGGTGAGCGCCGCTGTGCTCATCTGACC 1620
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CACACACGTGGCGCCAACACCACAGGGGTCGGGGTGCCCCAGTCCTCGGGGCCGAAACGG 1680
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GAGCGGCCTGACCCCTCGGGGAGACAGAGAGAGGGGTGGCCACGTCACCGTCGGGCCCGA 1740
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      CCCCCCCGAGGGGGTCGGGCCACGTGAGTGATCGCGGCTACCCAAGCCTCTAGTCACGAT 1800
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      ACCCCCGGCCCCATGTCACCGACACAAGTCGAGTTAGAACTCGAGTTGGATTGGAGACAA 1860
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      AAACTTGAGCTGGAAAAAGAACAGTTGAGAGGAAAGATAGAGGTAATGAAAATGATGGGA 1920
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      TCTGAGGAAGATGGAACATTGAAGGAACTTGATGAGTTGCGTACAAAGCTGGAAGAAAAA 1980
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      GATGATGACATGGAGTCCATGGATTCTCTTAACCAGGCCCTGATTATTAAGAATCAAAGG 2040
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      ACCATTGATGAGCTGAAAGAGGCCAAGAAAGGCCAAGAAAGAACTGATAAATGTATACGT 2100
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ------------------------------------------------------------
                                                                                  

consensus_7371#0      TTTATCGCTATTACTTTGCTATGAACCTATGATTGTCATAATTCATGTATCCGGCTATCC 2160
consensus_7371#2      ------------------------------------------------------------
consensus_7371#1      ---------------------------------GAACTTATTTGTGCATAAAATCCTCGC 27
                                                                                  

consensus_7371#0      GCTCA--TCCTTTTCCGAGGACCAT-TCACTTGCTG-TGCAGGGATTAGAAAAAATGGCA 2216
consensus_7371#2      ATTGG--TGAGCTGAAAGAGCCCAA-GAAAGANCTGATAAATGGATTAGAAAAAATGGCA 57
consensus_7371#1      CCTGGAATCAGCCGAGGTACACAAACTAACAATTTAATATACAAATCCATCATAATAATA 87
                        *    *             * *    *     *  *  *   **     * ***   *

consensus_7371#0      GGAGTTCGATCCATTATAGGTGTGAAGAGAATGGGTGAGC--TTGATCAGAAGGCCTTTT 2274
consensus_7371#2      GGAGTTCGATCCATCATAGGTGTGAAGAGAATGGGTGAGC--TTGATTAGAAGACCTTTT 115
consensus_7371#1      ACGTTACATACTTACAAAAGAAAAAAAACAGCAGCGGAATAATGGTCTAGCAATGGCTTC 147
                          * *   *    * * *    ** * *   *  **    * *   ** *     ** 

consensus_7371#0      ATAATGCATGCAAAAATAAAATGCCAAATAATAAGATG---AAATTGGCACTTGTTTGTT 2331
consensus_7371#2      ATAATGCATGCAAAAATAAAATGCCAAATGATAAGCTG---GAATTGGCACTTGTTTGTT 172
consensus_7371#1      AGCTCTGACGGAGCGTGGGGCTCCTCACCGGGAGACCGCGCAGGCCCCCCTTTGCCGGTT 207
                      *      * * *         * *  *     *    *          *  ***   ***

consensus_7371#0      CAAAATGGGA----AGATGAGATAACAAAACCAGAATG-GCATCCTTTCAAAGTTATCGA 2386
consensus_7371#2      CAAAATGGGA----AGATGAGATACCAAAACCAGAATG-GCATCCTTTCAAAGTTATCGA 227
consensus_7371#1      CGGCCGGGGGCGCTAAGTGAGGTTCTTCGCCCTCGATCTGAGGAACGTCAGCGAGAGAGG 267
                      *     ***     *  **** *       **   **  *       ***  *  *  * 

consensus_7371#0      GACTGCTGGACAGACAAAGGAAATAATCAAGG--AAGATGATGGGAAGCT--GCAGGCTT 2442
consensus_7371#2      GACTGCTGGACAGATAAAGGAAATAATCAAGG--AAGATGATGGGAAGCT--ACAGGCTT 283
consensus_7371#1      AAGCGCACAAGACACGGGCGACGTAGACAGGTTCGGGCCGCTGAGAAGCGTAACACCCTA 327
                       *  **   * * *     **  **  ** *     *  * ** *****    **  ** 

consensus_7371#0      TGAGGGCGCAATATGGGGATGAGGCTTGCAACGTTGTCGTTAAGGCCCTTGTTGAAATGA 2502
consensus_7371#2      TTAGGGCGCAATATGGGGATGAGGCTTGCAACGTTGTCGTTAAGGCCCTTGTTGAAATGA 343
consensus_7371#1      CTCCTGTGTTCTGGTGGATCTGTGTCTGAAGGAATACAGAGAGCCGGAGAGCGAGAGAGA 387
                           * *   *   **      *  ** *    *   *  *        *    *  **

consensus_7371#0      ATGAATAC----AATCCCAGTGGCATGTATCCTG---------TCCCTGAGCTGTGGAAC 2549
consensus_7371#2      ATGAATAC----AATCCCGGTGGCAGGTATCCTG---------TCCCTGAGCTGTGGAAC 390
consensus_7371#1      GTTCAGGCTCTAGAACCCGTTCGCCAGAGTCCCACAACCCCCCTTCCTGCTCCTTTTTCC 447
                       *  *  *     * ***  * **  *  ***           * ****  *  *    *

consensus_7371#0      TTCAAGCAGAACCGGAGTGCCCCTATGCCAGAGGCAGCAAGTTACTTGCTGAAG---CAG 2606
consensus_7371#2      TTCAAGCAGAACCGGAGTGCCCCTATGCCAGAGGCAGCAAGTTACTTGCTAAAG---CAG 447
consensus_7371#1      CTCCTCTTCTTTTTTCCTCCCTCTAGGCCTGGGCCTCCTTTTTATCTGGTCAGGGGTCAC 507
                       **              * ** *** *** * * *  *   ***  ** * * *   ** 

consensus_7371#0      TGGAAGA---------CGCACAAGAAGAGAAACAC-CTGAGTGAGATCTGGACC---CTG 2653
consensus_7371#2      TGGAAGA---------CGCCCAAGAAGAGAAACAC-CTGAGTGAGATCTGGACC---CTG 494
consensus_7371#1      CACATGGGCCTCTCGCTGCCTAAGAAAGGAAACATGCTTTTTACAATGAGGGCTAGTCTA 567
                         * *           **  *****  ******  **   *   **  ** *    ** 

consensus_7371#0      CTCGTGGTATCGTTATCTGTAGAATTCGTCCCCTGACATGTAGTTGGATGAGGCTGCCTA 2713
consensus_7371#2      CTCGTGGTATCGTTATCTGTAGAATTCGTCCC-TGACATGTAGTTGGATGAGGCTGCCTA 553
consensus_7371#1      CAGCCGGAAATGACTTCTGACAAGCAGAGCACACGCCTCCTGCCCCGCTC-GCCCGCTTT 626
                      *    ** *  *   ****   *      * *  * *   *     * *  * * ** * 

consensus_7371#0      TTAGTGAGGCAAGTATTCATATCTCCCAGACATTGTCTGTCTCTAC-TGGCGACA-TTGT 2771
consensus_7371#2      TTAGTGAAGCAAGTATTCATATCTCCCAGACATTGTCTGTCACTAC-TGGCGACA-TTGT 611
consensus_7371#1      TCCCGTGGACGCCCATTTCAACCTTTATTTAATGGCCAGCGACTTCCTTGCCATACTTGC 686
                      *        *    ***   * **       ** * * *   ** * * ** * * *** 

consensus_7371#0      AGTGCACATTTGAGAG-TTGAGGCTATATGAATATTCGC--------------------- 2809
consensus_7371#2      AGTGCACATTTGAGAGGTTGGGG------------------------------------- 634
consensus_7371#1      GCTGAAGCCTGGAATGAATCTGACCGGGACTGACATACCAACTCCAGGAGTCAGCACGCC 746
                        ** *   * **  *  *  *                                      

consensus_7371#0      -
consensus_7371#2      -
consensus_7371#1      G 747


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)