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Oryza sativa
cluster # 7375 cluster # 7375       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7375#0 length = 975 sequences # 4  

consensusID : consensus_7375#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 975
fasta sequence
                              [GCTGACATCTGTTGCTTCTAGACATGCTCCAAGAATCAGTTTCTTTTTTCGCCTTTCCATAAACACATCCACATCGCTCACTCTGATCCTTTGTCATCAGGCAACGCTTTGCAGCAGCAGCAAATGGACCGAGGGGTGGAGCTGATGGGGTGCGTCTGCCGGATCAAGAACTGCGCCGTCGAGCTCCTGGAGATGGAGGAGGATC-TGG-TGA-TTGGCATGGACGACGACGACAGGGACCTGTTCTGGAGTGAGCTCCAGCTGAAGACCACCTTCCT-TTACATTGATCTGAGCCGGGTGATCTCCTCCAGCGAGAGCGATGAGCGCAGGGAGGCGCTCA-CCCTGCTCACCAACAAGCTCTTCTACTTCTTGGAGGAGCTGACCGACGCGGTGACGAGCGGAAGCGTCTCCTTCACGAAGCTGTGCTACGGCGACGCCGCTCAGGCTCTCCGTGAGGTGGTCGCCTTCCTCGCGCCGCCGCAGTAGCTATACCCTGGTGGGCTCATGATCCCAGCACTTCACTGCACTGCACTGCAAATCTGATATGCTCTGAATTCTGAAGGCAGTAGGGAGAGTCAGAGGCACTAGCAAGGCAAGGAACTTCTAGAAGTGTCTCTAGAAACTCTTGGAGAAGGATGAGTCTATGGCTCCTGTGTAAGAAGCATGTGAGAAGAACTGAAGCTAGAT-CACCCGTGTACATGCATGATGAGATCATGAGAGCA-TTGCCTCTCGAGTTTGAA-CAAACCAAGAAAGATATAATATCTTAGGGCGTCCCTCTTTCCACCAAAAAAAAAAGACTAGNTCNTGTTTTCCCNTTTGCTCTTGAATTTATCTGCCTTTGCTTGATGAGTTATAAAAACCAGCGCCGAAATCGATATTGATGTTCGAACGTGGAAAAACNCCNCAAGTGATCCAATNTTGATGATGACAACAAGGCATTTTGTTTGTTAAAAATATTTTATTGAAAAAAAAAAAAAA]

[+] EMBL AK105126             [GCTGACATCTGTTGCTTCTAGACATGCTCCAAGAATCAGTTTCTTTTTTCGCCTTTCCATAAACACATCCACATCGCTCACTCTGATCCTTTGTCATCAGGCAACGCTTTGCAGCAGCAGCAAATGGACCGAGGGGTGGAGCTGATGGGGTGCGTCTGCCGGATCAAGAACTGCGCCGTCGAGCTCCTGGAGATGGAGGAGGATC TGG TGA TTGGCATGGACGACGACGACAGGGACCTGTTCTGGAGTGAGCTCCAGCTGAAGACCACCTTCCT TTACATTGATCTGAGCCGGGTGATCTCCTCCAGCGAGAGCGATGAGCGCAGGGAGGCGCTCA CCCTGCTCACCAACAAGCTCTTCTACTTCTTGGAGGAGCTGACCGACGCGGTGACGAGCGGAAGCGTCTCCTTCACGAAGCTGTGCTACGGCGACGCCGCTCAGGCTCTCCGTGAGGTGGTCGCCTTCCTCGCGCCGCCGCAGTAGCTATACCCTGGTGGGCTCATGATCCCAGCACTTCACTGCACTGCACTGCAAATCTGATATGCTCTGAATTCTGAAGGCAGTAGGGAGAGTCAGAGGCACTAGCAAGGCAAGGAACTTCTAGAAGTGTCTCTAGAAACTCTTGGAGAAGGATGAGTCTATGGCTCCTGTGTAAGAAGCATGTGAGAAGAACTGAAGCTAGAT CACCCGTGTACATGCATGATGAGATCATGAGAGCA TTGCCTCTCGAGTTT                                                                                                                                                                                                                                                  ]
[+] EMBL AU164073             [                                                                                                                   AGCAGCAAATGGACCGAGGGGTGGAGCTGATGGGGTGCGTCTGCCGGATCAAGAACTGCGCCGTCGAGCTCCTGGAGATGGAGGAGGATC TGG TGA TTGGCATGGACGACGACGACAGGGACCTGTTCTGGAGTGAGCTCCAGCTGAAGACCACCTTCCT TTACATTGATCTGAGCCGGGTGATCTCCTCCAGCGAGAGCGATGAGCGCAGGGAGGCGCTCA CCCTGCTCACCAACAAGCTCTTCTACTTCTTGGAGGAGCTGACCGACGCGGTGACGAGCGGAAGCGTCTCCTTCACGAAGCTGTGCTACGGCGACGCCGCTCAGGCTCTCCGTGAGGTGGTCGCCTTCCTCGCGCCGCCGCAGTAGCTATACCCTGGTGGGCTCATGATCCCAGCACTTCACTGCACTGCACTGCAAATCTGATATGCTCTGAATTCTGAAGGCAGTAGGGAGAGTCAGAGGCACTAGCAAGGCAAGGAACTTCTAGAAGTGTCTCTAGAAACTCTTGGAGAAG                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BI797239             [                                                                                                                                                                                                  GGAGGA  ATCTTGGTTGATTTGCCAT GACGACGACGACA GGACCT TTCTGGAGTGAGCTCCAGCTGAAGACCACCTTCCTGTTACATTGATCTGA CCGGGTGATCTCCTCCAGCGAGAGCGATGAGCCCAGGGAGGCGCTCACCCCTGCTCACCAACAAGCTCTTCTACTTCTTGGAGGAGCTGACCGACGCGGTGACGAGCGGAAGCGTCTCCTTCACGAAGCTGTGCTACGGCGACCCAGCCCAGGCTCTCCGTGAGGTGGTCGCCTTCCTCGCGCCGCC CAGTAGCTATACCCTGGTGGGCTCATGATCCCAGCACTTCACTGCACTGCACTGCAAATCTGATATGCTCTGAATTCTGAAGCCAGTAGGGAGAGTCAGAGGCACTAGCAAGGCAAGGAACTTCTAGAAGTGTCTCTAGAAACTCTTGGAGAAGGATGAGTCTATGGCTCCTGTGTAAGAAGCATGTGAGAAGAACTGAAGCTAGATCCACCCGTGTACATGCATGATGAGATCATGAGA CACTTCCATCTCGAGTTTGAA CAAACCAAGAAAGATATAATATCTTAGGGCGTCCCTCTTTCCACCAAAAAAAAAA                                                                                                                                                                                       ]
[+] EMBL AU172788             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAGAAACTCTTGGAGAAGGATGAGTCTATGGCTCCTGTGTAANAAGCATGTGAGAAGAACTGAAGCTAGAT CACCCGTGNACATGCATGATGAGATCATGAGAGCA TTGCCTNTCGAGTTTNAAGCAAAGCAAGAAAGATATAATATCTTAGGGCGTGCCTCTTTCCAGCAAAAAAATTCGACTAGNTCNTGTTTTCCCNTTTGCTCTTGAATTTATCTGCCTTTGCTTGATGAGTTATAAAAACCAGCGCCGAAATCGATATTGATGTTCGAACGTGGAAAAACNCCNCAAGTGATCCAATNTTGATGATGACAACAAGGCATTTTGTTTGTTAAAAATATTTTATTGAAAAAAAAAAAAAA]


>consensus_7375#0 GCTGACATCTGTTGCTTCTAGACATGCTCCAAGAATCAGTTTCTTTTTTCGCCTTTCCAT AAACACATCCACATCGCTCACTCTGATCCTTTGTCATCAGGCAACGCTTTGCAGCAGCAG CAAATGGACCGAGGGGTGGAGCTGATGGGGTGCGTCTGCCGGATCAAGAACTGCGCCGTC GAGCTCCTGGAGATGGAGGAGGATCTGGTGATTGGCATGGACGACGACGACAGGGACCTG TTCTGGAGTGAGCTCCAGCTGAAGACCACCTTCCTTTACATTGATCTGAGCCGGGTGATC TCCTCCAGCGAGAGCGATGAGCGCAGGGAGGCGCTCACCCTGCTCACCAACAAGCTCTTC TACTTCTTGGAGGAGCTGACCGACGCGGTGACGAGCGGAAGCGTCTCCTTCACGAAGCTG TGCTACGGCGACGCCGCTCAGGCTCTCCGTGAGGTGGTCGCCTTCCTCGCGCCGCCGCAG TAGCTATACCCTGGTGGGCTCATGATCCCAGCACTTCACTGCACTGCACTGCAAATCTGA TATGCTCTGAATTCTGAAGGCAGTAGGGAGAGTCAGAGGCACTAGCAAGGCAAGGAACTT CTAGAAGTGTCTCTAGAAACTCTTGGAGAAGGATGAGTCTATGGCTCCTGTGTAAGAAGC ATGTGAGAAGAACTGAAGCTAGATCACCCGTGTACATGCATGATGAGATCATGAGAGCAT TGCCTCTCGAGTTTGAACAAACCAAGAAAGATATAATATCTTAGGGCGTCCCTCTTTCCA CCAAAAAAAAAAGACTAGNTCNTGTTTTCCCNTTTGCTCTTGAATTTATCTGCCTTTGCT TGATGAGTTATAAAAACCAGCGCCGAAATCGATATTGATGTTCGAACGTGGAAAAACNCC NCAAGTGATCCAATNTTGATGATGACAACAAGGCATTTTGTTTGTTAAAAATATTTTATT GAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)